RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COPS7A (Homo sapiens)

Ensembl gene IDs: ENSG00000111652

Ensembl transcript IDs: ENST00000229251.7, ENST00000455113.6, ENST00000534877.5, ENST00000534947.5, ENST00000536872.5, ENST00000537022.5, ENST00000538375.5, ENST00000538410.5, ENST00000538753.5, ENST00000539735.5, ENST00000540408.5, ENST00000541866.5, ENST00000542150.5, ENST00000542630.1, ENST00000543155.6, ENST00000543170.5, ENST00000543537.5, ENST00000543939.5, ENST00000544316.1, ENST00000544725.5, ENST00000546229.5, ENST00000626119.2

Found 971 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGAGCTGGTTCCCTCAGCTCAGTCAGG +
Preference number: 1 (lower is better)
Translates to: ALPRSPLPFEAFLLG*RWLVPGAGSLSSVR
Trigger: CCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGCCAGGAGCTGGTTCCCTCAGCTCAG +
Preference number: 1 (lower is better)
Translates to: SWRSLGAPCPLRLSC*AGAGWCQELVPSAQ
Trigger: CTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp GCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCT +
Preference number: 1 (lower is better)
Translates to: AGCPARCCSQPRAAG*AGPGSHEARQHTQP
Trigger: AGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR TCA 90 bp CCTCACAGCCCACACACCATTCCTGCAGGGTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCT +
Preference number: 1 (lower is better)
Translates to: PHSPHTIPAGFGQWH*GPGAGCPARCCSQP
Trigger: AGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGGCTGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp GCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTTGCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: APCPLRLSCWAGAGW*QELVPSAQSGVAQG
Trigger: ACCCTGAGCAACACCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTTGCTCAG +
Preference number: 1 (lower is better)
Translates to: GAPCPLRLSCWAGAG*CQELVPSAQSGVAQ
Trigger: CTGAGCAACACCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATaGCTGACAGCACGACCTCACAGCCCACACACCATTCCTGCAGGG +
Preference number: 1 (lower is better)
Translates to: AAAPCVGWHGSPAPQ*LTARPHSPHTIPAG
Trigger: CCCTGCAGGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR TCA 90 bp CTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCCCACACACCATTCCTGCAGGGTTCG +
Preference number: 1 (lower is better)
Translates to: LLLVLVGTAHLLLNA*QHDLTAHTPFLQGS
Trigger: CGAACCCTGCAGGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp TTCAGGCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCAT +
Preference number: 1 (lower is better)
Translates to: FRPSCCSLCWLARLT*SSMPDSTTSQPTHH
Trigger: ATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 90 bp TCTCAATCTGCTGCTTCAGGCCCAGCTGCTGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCAC +
Preference number: 1 (lower is better)
Translates to: SQSAASGPAAAPCVG*HGSPAPQCLTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 90 bp GGCACAGAAGGCTCTCTGAGGACTCCTAAGAGGCAGGCAGGCAGCTaGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTC +
Preference number: 1 (lower is better)
Translates to: GTEGSLRTPKRQAGS*DPTSPGRKRQSFQF
Trigger: GAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTGCCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR TCA 90 bp CCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCTGCTGCCGTCGTAACTTTAATGGTT +
Preference number: 1 (lower is better)
Translates to: PGAGSLSSVRCCSGS*DVAAAAAAVVTLMV
Trigger: AACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACACCTGACTGAGCTGAGGGAACCAGCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp TTAAGGTTGGCAACCTCACTCTCAATCTGCTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATG +
Preference number: 1 (lower is better)
Translates to: LRLATSLSICCFRPS*CSLCWLARLTCSSM
Trigger: CATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGAGTGAGGTTGCCAACCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 2 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 2 (lower is better)
Translates to: SWRSLGAPCPLRLSCWAGSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: SWRSLGAPCPLRLSCWAGSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 2 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 2 (lower is better)
Translates to: ALPRSPLPFEAFLLGWRWCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CAA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: RSPLPFEAFLLGWRW*VPGAGSLSSVRCCS
Trigger: TGAGCAACACCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 2 (lower is better)
Translates to: AAAPCVGWHGSPAPQCLTSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...TGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 2 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 2 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: SRWLRWSREPRSTSAYTATRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 2 (lower is better)
Translates to: RSPLPFEAFLLGWRWLVPRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...TGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: QFDLDQILALPRSPLPFEWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: SWRSLGAPCPLRLSCWAGRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: GAGCPARCCSQPRAAGCASQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 2 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 2 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 2 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CGACAGTCCTTTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RQSFQFDLDQILALPRSPSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CAA 90 bp CTCTCAATCTGCTGCTTCAGGCCCAGCTGCTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCA +
Preference number: 2 (lower is better)
Translates to: LSICCFRPSCCSLCW*ARLTCSSMPDSTTS
Trigger: TGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: AAAPCVGWHGSPAPQCLTAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...TGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: SWRSLGAPCPLRLSCWAGSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 2 (lower is better)
Translates to: ALPRSPLPFEAFLLGWRWSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...CCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGACAGTCCTTTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 2 (lower is better)
Translates to: RQSFQFDLDQILALPRSPGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp AAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 2 (lower is better)
Translates to: KSWRSLGAPCPLRLSCWALARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 2 (lower is better)
Translates to: FNSTWTKSWRSLGAPCPLAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...CAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: SRWLRWSREPRSTSAYTANRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAACCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 2 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: HHSCRVRAMALRSWRWMSSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 2 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 2 (lower is better)
Translates to: RSPLPFEAFLLGWRWLVPSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...TGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGACCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 2 (lower is better)
Translates to: QFDLDQILALPRSPLPFECFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGACAGTCCTTTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 2 (lower is better)
Translates to: RQSFQFDLDQILALPRSPGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 2 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: AAAPCVGWHGSPAPQCLTSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...TGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCAAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 2 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGACAGTCCTTTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 2 (lower is better)
Translates to: RQSFQFDLDQILALPRSPCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQETGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQELRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: KSWRSLGAPCPLRLSCWAYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 2 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 2 (lower is better)
Translates to: QFDLDQILALPRSPLPFESLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGATACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GAGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCAGCTAAGTAGTCAGCGTATGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: EPLLVEEDSGLQLSSQRMSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CATACGCTGACTACTTAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
3UTR-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATTGTTCTGCCACTTTTGTGTaGACGGTTCTCTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: SLVPHCQHVRTQAASSDCSATFV*TVLSAV
Trigger: CACAGCAGAGAGAACCGTTCACACAAAAGTGGCAGA...ACAATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
3UTR-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 2 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CAACTGAGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATCACTCTCAGCCAGCTTaGCCTTCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: QLRGVEAYSSEPLLVEEDHSQPA*PSKVLG
Trigger: TCCCAGCACTTTGGAAGGCCAAGCTGGCTGAGAGTG...ATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 2 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
3UTR-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGAGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATTCCCCGCACCCAGCCAAGTaGTTCTTTTTCATCACTTTG +
Preference number: 2 (lower is better)
Translates to: LRGVEAYSSEPLLVEEDSPHPAK*FFFITL
Trigger: CAAAGTGATGAAAAAGAAGCACTTGGCTGGGTGCGG...GGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537022.5
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR CCA 72 bp TCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGCCAGGAGCTGGTTCCC +
Preference number: 3 (lower is better)
Translates to: SLGAPCPLRLSC*AGAGWCQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR TCA 72 bp CCACACACCATTCCTGCAGGGTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGT +
Preference number: 3 (lower is better)
Translates to: PHTIPAGFGQWH*GPGAGCPARCC
Trigger: ACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR TCA 72 bp GTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCCCACACACCATTCCTG +
Preference number: 3 (lower is better)
Translates to: VLVGTAHLLLNA*QHDLTAHTPFL
Trigger: CAGGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 72 bp GCAACCTCACTCTCAATCTGCTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGC +
Preference number: 3 (lower is better)
Translates to: ATSLSICCFRPS*CSLCWLARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGAGTGAGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 72 bp CCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTT +
Preference number: 3 (lower is better)
Translates to: PLRLSCWAGAGW*QELVPSAQSGV
Trigger: AACACCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp TTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: FNSTWTKSWRSLGAPCPLCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...CAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 72 bp CCCCAGGGAGGAAACGACAGTCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGC +
Preference number: 3 (lower is better)
Translates to: PQGGNDSPFNST*TKSWRSLGAPC
Trigger: GCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTTCCTCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: TPVGYAPDRATPIRATHLRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: IKPFQDCHQASRDGQGQECSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: GYAPDRATPIRATHLLNDRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTG +
Preference number: 3 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPFEAF*LGWRWL
Trigger: CAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR CCA 72 bp AACGACAGTCCTTTCAATTCGACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTT +
Preference number: 3 (lower is better)
Translates to: NDSPFNSTWTKS*RSLGAPCPLRL
Trigger: AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 72 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTaGATATGGGATACACTTTACTTTAGCAGCCAGGGT +
Preference number: 3 (lower is better)
Translates to: PHITQGKSLQQH*IWDTLYFSSQG
Trigger: ACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 3 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR TCA 72 bp AGGGTGACAACTGAGAGGTGTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: RVTTERCRSLFF*ASVSGGRFRAS
Trigger: TGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTGTCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
3UTR TCA 72 bp TGGGATACACTTTACTTTAGCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: WDTLYFSSQGDN*EVSKLILLSLC
Trigger: ACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCTGCTAAAGTAAAGTGTATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
CDS-3UTR GCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000543939.5
CDS-3UTR TCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGGCATGGTGTCCACCCTaGCGACGCTCCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPAWCPP*RRSLSS
Trigger: AGAGCTGAGGGAGCGTCGTCAGGGTGGACACCATGC...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536872.5
ENST00000543537.5
CDS-3UTR GCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SRWLRWSREPRSTSAYTAPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCAPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR CAA 72 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTGGTGCCAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ALPRSPLPFEAF*LGWRWLVPGAG
Trigger: ACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNAECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SRWLRWSREPRSTSAYTAMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTTGCTTCGTCGTACCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVCFVVP*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCA...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543939.5
CDS-3UTR TCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: HHSCRVRAMALRSWRWMSSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALPRSPLPFEAFLLGWRWAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGAGGTCCCCGATGGCTaGTCGGATGGGAAGCACAAG +
Preference number: 4 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDEVPDG*SDGKHK
Trigger: CTTGTGCTTCCCATCCGACCAGCCATCGGGGACCTC...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR CCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGCTAGAGGTCCCCGATaGCTGGTCGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGARGPR*LVGWEA
Trigger: TGCTTCCCATCCGACCAGCCATCGGGGACCTCTAGC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR TCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: RSPLPFEAFLLGWRWLVPFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACACACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: THHSCRVRAMALRSWRWMSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...CATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: VGWHGSPAPQCLTARPHSSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCAVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VGWHGSPAPQCLTARPHSWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: ALPRSPLPFEAFLLGWRWTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...CCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACCGCCCAGCGACCGTaGGCTCCCGCCGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMTAQRP*APADCF
Trigger: GAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTATTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCACFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GTEVLALDVPPDAVVNLESLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...CTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000538375.5
CDS-3UTR GCA 90 bp TGTGAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCAGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CEQPEGRGKVTLSQLGLPAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...TGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR CCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCCAGGATGTCCAGAGCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRWLRWSREPRSTSAYTAQDVQS*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGCTCTGGACATCCTG...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543170.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: VALVQGATKHVSIHSLNHLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...GTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VALVQGATKHVSIHSLNHWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GTEVLALDVPPDAVVNLELRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...CTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTTCCTGCCACCTCCCTaGAGAGTCGCTCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTFLPPP*RVALAT
Trigger: AGTGGCCAGAGCGACTCTTCAGGGAGGTGGCAGGAA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543155.6
ENST00000626119.2
CDS-3UTR TCA 90 bp GGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGAAGTCGGTTCTGCGGTaGGGAATCAGACATGGAGCG +
Preference number: 4 (lower is better)
Translates to: GTEVLALDVPPDAVVNLEKSVLR*GIRHGA
Trigger: CGCTCCATGTCTGATTCCTCACCGCAGAACCGACTT...CTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR GCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AAGCAGPGSHEARQHTQPTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...AGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCATTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: AAGCAGPGSHEARQHTQPCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...AGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: AAAPCVGWHGSPAPQCLTAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGIAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000538375.5
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR GCA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTPWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGG...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGGGCTCCCGCCGACTaGTTCGTCGTACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMWAPAD*FVVPWV
Trigger: GACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR CCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: SRWLRWSREPRSTSAYTAPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNACCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCATTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR CCA 90 bp TGTGAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCAAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: CEQPEGRGKVTLSQLGLPRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...TGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR CCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000538375.5
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCTTCGTCGTACCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQCFVVP*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTHSSLH*VWGTWA
Trigger: AGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RWSREPRSTSAYTASITRCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VALVQGATKHVSIHSLNHEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...GTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RWSREPRSTSAYTASITRGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCATTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCAGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCATGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: RSPLPFEAFLLGWRWLVPCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...TGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACACACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: THHSCRVRAMALRSWRWMSLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...CATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCAGGATGTCCAGAGCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTQDVQS*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGCTCTGGACATCCTG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229251.7
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CRTLRRARASSNTAYGIHPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...GTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACACACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: THHSCRVRAMALRSWRWMCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATATGCTTCGTCGTACCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGICFVVP*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCA...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR TCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCARSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAACTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: QFDLDQILALPRSPLPFELLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCANRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNARILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTTCCTGCCACCTCCCTaGAGAGTCGCTCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDFLPPP*RVALAT
Trigger: AGTGGCCAGAGCGACTCTTCAGGGAGGTGGCAGGAA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543155.6
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCATGGTGTCCACCCTaGCGACGCTCCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPAWCPP*RRSLSS
Trigger: AGAGCTGAGGGAGCGTCGTCAGGGTGGACACCATGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR GCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GTCAGCGTATGTCCCATAAGCAAACACTGTGAGCAGCCGGAAGGTAGAGGCAAAGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: VSVCPISKHCEQPEGRGKECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...TTTGCCTCTACCTTCCGGCTGCTCACAGTGTTTGCTTATGGGACATACGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR GCA 90 bp CGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: RTLRRARASSNTAYGIHFECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...AAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCAGGATGTCCAGAGCTaGAAGGAAAGAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMQDVQS*KERGCE
Trigger: TTCACATCCTCTTTCCTTGCAGCTCTGGACATCCTG...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR CCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAGGATGTCCAGAGCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSQDVQS*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGCTCTGGACATCCTG...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543170.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGATCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACATCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
CDS-3UTR CCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVDAKEK*VSHGVH
Trigger: GTGGACACCATGCGACACCCATTTCTCCTTTGCATC...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536872.5
ENST00000543537.5
CDS-3UTR CCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGACCGCCCAGCGACCGTaGGCTCCCGCCGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARTAQRP*APADCF
Trigger: GAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGT...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGACCGCCCAGCGACCGTaGGCTCCCGCCGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLTAQRP*APADCF
Trigger: GAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMHSSLH*VWGTWA
Trigger: AGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTGGTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGCPARCCSQPRAAGCAGRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...ACCAGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNASQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTCTGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WSREPRSTSAYTASITRSEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...AGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QFDLDQILALPRSPLPFEAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCAVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTTCCGCACTCATCACTaGACTGAGTGTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTFRTHH*TECGGL
Trigger: AAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTAGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TACTCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: YSLVPHCQHVRTQAASSDECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...ATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCAAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PHITQGKSLQQHCIWDTLAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...AAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDSLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATGGGCTCCCGCCGACTaGTTCGTCGTACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEWAPAD*FVVPWV
Trigger: GACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR CCA 90 bp GTCAGCGTATGTCCCATAAGCAAACACTGTGAGCAGCCGGAAGGTAGAGGCAAACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VSVCPISKHCEQPEGRGKPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TTTGCCTCTACCTTCCGGCTGCTCACAGTGTTTGCTTATGGGACATACGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQELRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: RTLRRARASSNTAYGIHFLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...AAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCAGCTAAGTAGTCAGCGTATGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: EPLLVEEDSGLQLSSQRMLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CATACGCTGACTACTTAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR CCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTACAAGGCTGAGGGACTaGATTGTAAAGGCACTAAGT +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGTRLRD*IVKALS
Trigger: ACTTAGTGCCTTTACAATCCAGTCCCTCAGCCTTGT...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGAGGTCCCCGATGGCTaGTCGGATGGGAAGCACAAG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPEVPDG*SDGKHK
Trigger: CTTGTGCTTCCCATCCGACCAGCCATCGGGGACCTC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCCTGAAGAGTCGCTCTaGCCACTAAACTCTATGGCG +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTPEESL*PLNSMA
Trigger: CGCCATAGAGTTTAGTGGCCAGAGCGACTCTTCAGG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626119.2
CDS-3UTR TCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTCATCACTGCACTaGGTGTGGGGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGIHSSLH*VWGTWA
Trigger: AGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTG...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: PHITQGKSLQQHCIWDTLLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...AAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNASLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCAAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACTTCCGCACTCATCACTaGACTGAGTGTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: VALVQGATKHVSIHSLNHFRTHH*TECGGL
Trigger: AAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAA...GTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: AAGCAGPGSHEARQHTQPSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...AGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGATTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: RWSREPRSTSAYTASITRCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPSLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGINACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGITGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCTGGGCTCCCGCCGACTaGTTCGTCGTACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSWAPAD*FVVPWV
Trigger: GACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCA...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGCAGAAATTGCTCCTaGTTCTGCCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSRNCS*FCPVTF
Trigger: GAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTAAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTDAKEK*VSHGVH
Trigger: GTGGACACCATGCGACACCCATTTCTCCTTTGCATC...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR CCA 90 bp TGTGAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCACACTCTCAGCCAGCTTaGCCTTCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CEQPEGRGKVTLSQLGLPHSQPA*PSKVLG
Trigger: TCCCAGCACTTTGGAAGGCCAAGCTGGCTGAGAGTG...TGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
3UTR CAA 72 bp TCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SPGRKRQSFQFD*DQILALPRSPL
Trigger: CAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQHSSLH*VWGTWA
Trigger: AGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCAAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQELLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQECCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: NGTEVLALDVPPDAVVNLDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...GAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACGCATGGTGTCCACCCTaGCGACGCTCCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYAWCPP*RRSLSS
Trigger: AGAGCTGAGGGAGCGTCGTCAGGGTGGACACCATGC...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536872.5
ENST00000543537.5
CDS-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCAGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: CEQPEGRGKVTLSQLGLPARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...TGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGITRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTACCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATATCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGISPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGATTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTCTTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: WSREPRSTSAYTASITRSFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...AGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACATGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACGTTCCAAGCCTTTCCTaGCACCTCCCTGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: CRTLRRARASSNTAYGIHVPSLS*HLPEES
Trigger: CGACTCTTCAGGGAGGTGGCAGGAAAGGCTTGGAAC...GTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAGTTCCAAGCCTTTCCTaGCACCTCCCTGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGIVPSLS*HLPEES
Trigger: CGACTCTTCAGGGAGGTGGCAGGAAAGGCTTGGAAC...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACCCCAAGACACAGGATaGAAAGGAGAAATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSPQDTG*KGEMGV
Trigger: GACACCCATTTCTCCTTTGCATCCTGTGTCTTGGGG...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR GCA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTCCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFPWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGG...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCAGAAATTGCTCCTaGTTCTGCCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHSRNCS*FCPVTF
Trigger: GAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCT...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTCTCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: WSREPRSTSAYTASITRSPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...AGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTATCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: KSWRSLGAPCPLRLSCWASLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTAGCGGTCTAAAATTCTaGTCTAGGAATCCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVSGLKF*SRNPKV
Trigger: GACTTTAGGATTCCTAGATCAGAATTTTAGACCGCT...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGAAGTCGGTTCTGCGGTaGGGAATCAGACATGGAGCG +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQKSVLR*GIRHGA
Trigger: CGCTCCATGTCTGATTCCTCACCGCAGAACCGACTT...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQESLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: PHITQGKSLQQHCIWDTLPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...AAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTGGTCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: AGCPARCCSQPRAAGCAGQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...ACCAGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTATGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYDAKEK*VSHGVH
Trigger: GTGGACACCATGCGACACCCATTTCTCCTTTGCATC...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536872.5
ENST00000543537.5
CDS-3UTR CCA 90 bp TCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATTGTGAGGTCCCCGATGGCTaGTCGGATGGGAAGCACAAG +
Preference number: 4 (lower is better)
Translates to: SLVPHCQHVRTQAASSDCEVPDG*SDGKHK
Trigger: CTTGTGCTTCCCATCCGACCAGCCATCGGGGACCTC...ACAATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCTAGAGGTCCCCGATaGCTGGTCGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLARGPR*LVGWEA
Trigger: TGCTTCCCATCCGACCAGCCATCGGGGACCTCTAGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGTWTKS*RSLGAS
Trigger: TGAGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538410.5
3UTR CAA 72 bp AAACGACAGTCCTTTCAATTCGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KRQSFQFDLDQI*ALPRSPLPFEA
Trigger: AGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCAAAGCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EQPEGRGKVTLSQLGLPKRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...CTTTGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RWSREPRSTSAYTASITRVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTTCCTGCCACCTCCCTaGAGAGTCGCTCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISFLPPP*RVALAT
Trigger: AGTGGCCAGAGCGACTCTTCAGGGAGGTGGCAGGAA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543155.6
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTGTCCAGAGCCCCATTaGAGCTTACACGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLCPEPH*SLHVAP
Trigger: CGGAGCCACGTGTAAGCTTCAATGGGGCTCTGGACA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543939.5
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATTCCGCACTCATCACTaGACTGAGTGTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGFRTHH*TECGGL
Trigger: AAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQETRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: QFDLDQILALPRSPLPFEKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTCTCCCAAACCACAATaGCCTCTTGCTCCATACGTC +
Preference number: 4 (lower is better)
Translates to: CRTLRRARASSNTAYGIHSPKPQ*PLAPYV
Trigger: GACGTATGGAGCAAGAGGGCATTGTGGTTTGGGAGA...GTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCAGCTAAGTAGTCAGCGTATGCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: EPLLVEEDSGLQLSSQRMPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...CATACGCTGACTACTTAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR CCA 90 bp AGGACTCAGGCTGCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTGAACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RTQAASSDCKLTLPLLCEPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TTCACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGCAGCCTGAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTAGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQETRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISHSSLH*VWGTWA
Trigger: AGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTG...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTATGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGCGGTCTAAAATTCTaGTCTAGGAATCCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLSGLKF*SRNPKV
Trigger: GACTTTAGGATTCCTAGATCAGAATTTTAGACCGCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATTCCGCACTCATCACTaGACTGAGTGTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEFRTHH*TECGGL
Trigger: AAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RTLRRARASSNTAYGIHFARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...AAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RRARASSNTAYGIHFTLATRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...TGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQECGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: RRARASSNTAYGIHFTLARCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...TGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISSLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGTTCCAAGCCTTTCCTaGCACCTCCCTGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLVPSLS*HLPEES
Trigger: CGACTCTTCAGGGAGGTGGCAGGAAAGGCTTGGAAC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543155.6
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACCCCAAGACACAGGATaGAAAGGAGAAATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGPQDTG*KGEMGV
Trigger: GACACCCATTTCTCCTTTGCATCCTGTGTCTTGGGG...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCACTAAGTCGGTTCTaGGGTGAGGAATCAGACATG +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGALSRF*GEESDM
Trigger: CATGTCTGATTCCTCACCGCAGAACCGACTTAGTGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR CCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGACCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAACAAGGCTGAGGGACTaGATTGTAAAGGCACTAAGT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQTRLRD*IVKALS
Trigger: ACTTAGTGCCTTTACAATCCAGTCCCTCAGCCTTGT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR CCA 90 bp CAGGCTGCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTGAACGGTTCGCTAGAGGTCCCCGATaGCTGGTCGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QAASSDCKLTLPLLCERFARGPR*LVGWEA
Trigger: TGCTTCCCATCCGACCAGCCATCGGGGACCTCTAGC...GAACCGTTCACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR TCA 90 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PHITQGKSLQQHCIWDTLRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...AAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: RTLRRARASSNTAYGIHFSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...AAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCTTCCGCACTCATCACTaGACTGAGTGTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSFRTHH*TECGGL
Trigger: AAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAA...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TACTCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: YSLVPHCQHVRTQAASSDARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...ATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR GCA 90 bp CGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RRARASSNTAYGIHFTLAARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...TGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACAAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: CRTLRRARASSNTAYGIHSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...GTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFSLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: CRTLRRARASSNTAYGIHNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...GTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTCTAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: WSREPRSTSAYTASITRSNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...AGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQESLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TTGATACTCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTCTGCCACTTTTGTGTaGACGGTTCTCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LILFSSTLSACQDSGCLLSATFV*TVLSAV
Trigger: CACAGCAGAGAGAACCGTTCACACAAAAGTGGCAGA...GAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGAGTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTATGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGCACTAAGTCGGTTCTaGGGTGAGGAATCAGACATG +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARALSRF*GEESDM
Trigger: CATGTCTGATTCCTCACCGCAGAACCGACTTAGTGC...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR GCA 90 bp TACTCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATGCACTAAGTCGGTTCTaGGGTGAGGAATCAGACATG +
Preference number: 4 (lower is better)
Translates to: YSLVPHCQHVRTQAASSDALSRF*GEESDM
Trigger: CATGTCTGATTCCTCACCGCAGAACCGACTTAGTGC...ATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACAGGATGTCCAGAGCTaGAAGGAAAGAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEQDVQS*KERGCE
Trigger: TTCACATCCTCTTTCCTTGCAGCTCTGGACATCCTG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR CCA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACTCAGGCTGCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTGAACGGCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: TQAASSDCKLTLPLLCERPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...CCGTTCACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGCAGCCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACACAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: RRARASSNTAYGIHFTLADRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...TGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AGGACTCAGGCTGCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTGAAAAGTCGGTTCTGCGGTaGGGAATCAGACATGGAGCG +
Preference number: 4 (lower is better)
Translates to: RTQAASSDCKLTLPLLCEKSVLR*GIRHGA
Trigger: CGCTCCATGTCTGATTCCTCACCGCAGAACCGACTT...TTCACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGCAGCCTGAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGIQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: FNSTWTKSWRSLGAPCPLQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...CAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CTGAGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATTCCCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRGVEAYSSEPLLVEEDSRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...GGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR TCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAACTGAGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: QLRGVEAYSSEPLLVEEDNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...ATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR GCA 90 bp ACTCAGGCTGCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTGAACGGAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: TQAASSDCKLTLPLLCERNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...CCGTTCACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGCAGCCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTAAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATTGTGTGTTCCTAGCAGTTTaGCATGTGTCTCTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: SLVPHCQHVRTQAASSDCVFLAV*HVSLSN
Trigger: GTTAGAGAGAGACACATGGCAAACTGCTAGGAACAC...ACAATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAACTGAGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATCCGCACCCAGCCAAGTaGTTCTTTTTCATCACTTTG +
Preference number: 4 (lower is better)
Translates to: QLRGVEAYSSEPLLVEEDPHPAK*FFFITL
Trigger: CAAAGTGATGAAAAAGAAGCACTTGGCTGGGTGCGG...ATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR GCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGATGTCCAGAGAGGATaGAAAGGAGAAATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLDVQRG*KGEMGV
Trigger: GACACCCATTTCTCCTTTGCATCCTCTCTGGACATC...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543537.5
CDS-3UTR GCA 90 bp GAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCAGCTAACCACAATGCCCTCTTaGTCCATACGTCATCCAATT +
Preference number: 4 (lower is better)
Translates to: EAYSSEPLLVEEDSGLQLTTMPS*SIRHPI
Trigger: AATTGGATGACGTATGGAGCAAGAGGGCATTGTGGT...TAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
CDS-3UTR CCA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATTGTAGCGGTCTAAAATTCTaGTCTAGGAATCCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: SLVPHCQHVRTQAASSDCSGLKF*SRNPKV
Trigger: GACTTTAGGATTCCTAGATCAGAATTTTAGACCGCT...ACAATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR GCA 90 bp GCTGCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTGAACGGTTCTCTCAGGATGTCCAGAGCTaGAAGGAAAGAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: AASSDCKLTLPLLCERFSQDVQS*KERGCE
Trigger: TTCACATCCTCTTTCCTTGCAGCTCTGGACATCCTG...AGAGAACCGTTCACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR GCA 90 bp GCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTGAACGGTTCTCTCTGGTGAACGGTTCTCTCTaGTGTGTTCCTAGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ASSDCKLTLPLLCERFSLVNGSL*CVPSSL
Trigger: CAAACTGCTAGGAACACAGCAGAGAGAACCGTTCAC...CAGAGAGAACCGTTCACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTCAGGACTCAGGCTGCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTACAAGGCTGAGGGACTaGATTGTAAAGGCACTAAGT +
Preference number: 4 (lower is better)
Translates to: VRTQAASSDCKLTLPLLCTRLRD*IVKALS
Trigger: ACTTAGTGCCTTTACAATCCAGTCCCTCAGCCTTGT...ACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGCAGCCTGAGTCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS GCA 90 bp CCGTGGGCTCCCGCCGACTGCTTCGTCGTACCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGCTTCGACCTCCAGCGCACCGGGCGG +
Preference number: 5 (lower is better)
Translates to: PWAPADCFVVPWVRL*GPLPGSFDLQRTGR
Trigger: CCGCCCGGTGCGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539735.5
ENST00000540408.5
ENST00000543939.5
CDS CCA 90 bp GCTCAGGATGTCCAGAGCCTGGGTCAGGCTCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCGCACCGGGCGGGGCCGCCGCTCCGT +
Preference number: 5 (lower is better)
Translates to: AQDVQSLGQALRAAT*KLRPPAHRAGPPLR
Trigger: ACGGAGCGGCGGCCCCGCCCGGTGCGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCTGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS CCA 90 bp CGACTGCTTCGTCGTACCCTGGGTCAGGCTCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCGCACCGGGCGGGGCCGCCGCTCCGT +
Preference number: 5 (lower is better)
Translates to: RLLRRTLGQALRAAT*KLRPPAHRAGPPLR
Trigger: ACGGAGCGGCGGCCCCGCCCGGTGCGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCAGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000540408.5
CDS CCA 90 bp ACCGCCCAGCGACCGTGGGCTCCCGCCGACTGCTTCGTCGTACCCTaGGTCAGGCTCTGCGGGCCGCTACCTGGAAGCTTCGACCTCCAG +
Preference number: 5 (lower is better)
Translates to: TAQRPWAPADCFVVP*VRLCGPLPGSFDLQ
Trigger: CTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539735.5
ENST00000540408.5
ENST00000543939.5
CDS CCA 90 bp AGACGTGGCTCCGCCCCCTCCCTTAAAGACACCGCCCAGCGACCGTaGGCTCCCGCCGACTGCTTCGTCGTACCCTGGGTCAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: RRGSAPSLKDTAQRP*APADCFVVPWVRLC
Trigger: GCAGAGCCTGACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGTGTCTTTAAGGGAGGGGGCGGAGCCACGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000540408.5
CDS CCA 90 bp ACACGTGGCTCCGCCCCCTCCCTTAAAGACACCGCCCAGCGACCGTaGGCTCCCGCCGACTGCTTCGTCGTACCCTGGGTCAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TRGSAPSLKDTAQRP*APADCFVVPWVRLC
Trigger: GCAGAGCCTGACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGTGTCTTTAAGGGAGGGGGCGGAGCCACGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543939.5
CDS-3UTR CAA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGCCCAGCTGCTGCTCCTaGTGTTGGTTGGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPPSCCS*CWLARL
Trigger: GAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGG...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCACTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: RSPLPFEAFLLGWRWLVPLGWRW*VPGAGS
Trigger: GGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAG...TGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQLGWRW*VPGAGS
Trigger: GGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAG...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCCTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNALGWRW*VPGAGS
Trigger: GGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAG...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTCTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGLSVGD*GSGCPE
Trigger: CTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAG...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: VALVQGATKHVSIHSLNHASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...GTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCCCCAGCTGCTGCTCCTaGTGTTGGTTGGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: PLVALVQGATKHVSIHSLPSCCS*CWLARL
Trigger: GAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGG...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: TPVGYAPDRATPIRATHLLGWRW*VPGAGS
Trigger: GGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAG...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTCCCTCGGAGCCCCTaGCCCTTTGAGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMLPRSP*PFEAFL
Trigger: CAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAG...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: GYAPDRATPIRATHLLNDASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SRWLRWSREPRSTSAYTAGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCCTCCCTCGGAGCCCCTaGCCCTTTGAGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: PLVALVQGATKHVSIHSLLPRSP*PFEAFL
Trigger: CAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAG...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCCTCCCTCGGAGCCCCTaGCCCTTTGAGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SRWLRWSREPRSTSAYTALPRSP*PFEAFL
Trigger: CAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAG...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNADLDQI*ALPRSP
Trigger: GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTC...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS TCA 90 bp GTTCTCCAAACACGTAGACACCAGGGGCCTCCAGCACCTGATGGATaGGTGTGGCCAGCGCTGCCCCCTTGGCCGACTTGGCTAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VLQTRRHQGPPAPDG*VWPALPPWPTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTCATCCATCAGGTGCTGGAGGCCCCTGGTGTCTACGTGTTTGGAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 20 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000536872.5
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000538753.5
ENST00000539735.5
ENST00000540408.5
ENST00000541866.5
ENST00000543155.6
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000544316.1
ENST00000544725.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCCTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTLSVGD*GSGCPE
Trigger: CTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAG...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCCCAGCTGCTGCTCCTaGTGTTGGTTGGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTPSCCS*CWLARL
Trigger: GAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCCCCAGCTGCTGCTCCTaGTGTTGGTTGGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: NGTEVLALDVPPDAVVNLPSCCS*CWLARL
Trigger: GAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGG...GAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACCTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: GYAPDRATPIRATHLLNDLGWRW*VPGAGS
Trigger: GGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAG...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACCTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYLGWRW*VPGAGS
Trigger: GGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAG...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: HHSCRVRAMALRSWRWMSPFEAF*LGWRWL
Trigger: CAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGG...GGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCCTCCCTCGGAGCCCCTaGCCCTTTGAGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNALPRSP*PFEAFL
Trigger: CAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAG...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS GCA 90 bp CGCTCCCTCGGAGCCTCACTCTCAATCTGCTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: RSLGASLSICCFRPS*CSLCWLARLTCSSM
Trigger: CATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGAGTGAGGCTCCGAGGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538410.5
CDS-3UTR CAA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTLSVGD*GSGCPE
Trigger: CTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: VGWHGSPAPQCLTARPHSAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...GCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TPVGYAPDRATPIRATHLCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCTGCTGCTCCTTGTGTaGGTTGGCACGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTLLLLV*VGTAHL
Trigger: CAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCTGCTGCTCCTTGTGTaGGTTGGCACGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: VGWHGSPAPQCLTARPHSLLLLV*VGTAHL
Trigger: CAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAG...GCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCTGCTGCTCCTTGTGTaGGTTGGCACGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTLLLLV*VGTAHL
Trigger: CAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACCCAGCTGCTGCTCCTaGTGTTGGTTGGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSPSCCS*CWLARL
Trigger: GAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGG...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPLGWRW*VPGAGS
Trigger: GGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTPFEAF*LGWRWL
Trigger: CAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: NGTEVLALDVPPDAVVNLGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...GAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS TCA 90 bp CCTGGTTCTGCCCTGTCACCTTCACTTCCGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCTCAGGATGTCCAGAGCCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: PGSALSPSLPHSSLH*VWGTWAQDVQSLGQ
Trigger: CTGACCCAGGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000543155.6
CDS TCA 90 bp CCTGGTTCTGCCCTGTCACCTTCACTTCCGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCTCAGGATGTCCAGAGCCTGACGACG +
Preference number: 5 (lower is better)
Translates to: PGSALSPSLPHSSLH*VWGTWAQDVQSLTT
Trigger: CGTCGTCAGGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534877.5
ENST00000546229.5
CDS TCA 90 bp CCTGGTTCTGCCCTGTCACCTTCACTTCCGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCTCAGGATGTCCAGAGACGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PGSALSPSLPHSSLH*VWGTWAQDVQRRGS
Trigger: GGAGCCACGTCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000540408.5
CDS GCA 90 bp GTGGCCAGCGCTGCCCCCTTGGCCGACTTGGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTCACCTTCACTTCCGCACTCATCACT +
Preference number: 5 (lower is better)
Translates to: VASAAPLADLARSRN*SWFCPVTFTSALIT
Trigger: AGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000536872.5
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000538753.5
ENST00000539735.5
ENST00000540408.5
ENST00000541866.5
ENST00000543155.6
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000544316.1
ENST00000544725.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RWSREPRSTSAYTASITRCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACCTGCTGCTCCTTGTGTaGGTTGGCACGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHLLLLV*VGTAHL
Trigger: CAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAG...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCCCAGCTGCTGCTCCTaGTGTTGGTTGGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMPSCCS*CWLARL
Trigger: GAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSPFEAF*LGWRWL
Trigger: CAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGG...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQDLDQI*ALPRSP
Trigger: GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: GYAPDRATPIRATHLLNDDLDQI*ALPRSP
Trigger: GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS GCA 90 bp TTCCAGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTaGATATGGGATACACTGGGGCCGCGGAGATCAGGCCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: FQLPHITQGKSLQQH*IWDTLGPRRSGQDL
Trigger: CAAATCCTGGCCTGATCTCCGCGGCCCCAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542630.1
CDS CCA 90 bp AGCGCTGCCCCCTTGGCCGACTTGGCTAGGAGCAGAAATTGCTCCTaGTTCTGCCCTGTCACCTTCACTTCCGCACTCATCACTGCACTG +
Preference number: 5 (lower is better)
Translates to: SAAPLADLARSRNCS*FCPVTFTSALITAL
Trigger: CAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000536872.5
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000538753.5
ENST00000539735.5
ENST00000540408.5
ENST00000541866.5
ENST00000543155.6
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000544316.1
ENST00000544725.5
ENST00000546229.5
ENST00000626119.2
CDS CCA 90 bp GGCTCAGGATGTCCAGAGCCCAAGACACAGGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCACCCTGACGACGCTCCCTCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: GSGCPEPKTQDAKEK*VSHGVHPDDAPSAL
Trigger: GAGAGCTGAGGGAGCGTCGTCAGGGTGGACACCATGCGACACCCATTTCTCCTTTGCATCCTGTGTCTTGGGCTCTGGACATCCTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538753.5
CDS-3UTR CAA 90 bp CGACAGTCCTTTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: RQSFQFDLDQILALPRSPAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: ARASSNTAYGIHFTLAARASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TACTCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: YSLVPHCQHVRTQAASSDASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...ATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CAA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GYAPDRATPIRATHLLNDCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGACCCAGCTGCTGCTCCTaGTGTTGGTTGGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGPSCCS*CWLARL
Trigger: GAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGG...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCCCAGCTGCTGCTCCTaGTGTTGGTTGGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPPSCCS*CWLARL
Trigger: GAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAACCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQPFEAF*LGWRWL
Trigger: CAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGG...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGCCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: QFDLDQILALPRSPLPFEPFEAF*LGWRWL
Trigger: CAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGG...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GYAPDRATPIRATHLLNDGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QFDLDQILALPRSPLPFEGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCTCCCTCGGAGCCCCTaGCCCTTTGAGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMLPRSP*PFEAFL
Trigger: CAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGDLDQI*ALPRSP
Trigger: GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMDLDQI*ALPRSL
Trigger: GAGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538410.5
CDS TCA 90 bp CCTGGTTCTGCCCTGTCACCTTCACTTCCGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCTCAGGATGTCCAGAGCTGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: PGSALSPSLPHSSLH*VWGTWAQDVQSWKL
Trigger: AAGCTTCCAGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229251.7
ENST00000543170.5
ENST00000626119.2
CDS TCA 90 bp CCTGGTTCTGCCCTGTCACCTTCACTTCCGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCTCAGGATGTCCAGAGCTGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: PGSALSPSLPHSSLH*VWGTWAQDVQSCKE
Trigger: TTCCTTGCAGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
ENST00000544316.1
CDS GCA 90 bp GCCCCCTTGGCCGACTTGGCTAGGAGCAGAAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCCGCACTCATCACTGCACTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: APLADLARSRNCSWF*PVTFTSALITALSV
Trigger: CACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000536872.5
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000538753.5
ENST00000539735.5
ENST00000540408.5
ENST00000541866.5
ENST00000543155.6
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000544316.1
ENST00000544725.5
ENST00000546229.5
ENST00000626119.2
CDS CCA 90 bp ACGTGCACCCCATTGAACCCCAAGACACAGGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCACCCTGACGACGCTCCCTCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: TCTPLNPKTQDAKEK*VSHGVHPDDAPSAL
Trigger: GAGAGCTGAGGGAGCGTCGTCAGGGTGGACACCATGCGACACCCATTTCTCCTTTGCATCCTGTGTCTTGGGGTTCAATGGGGTGCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
CDS-3UTR CAA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTCTGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: WSREPRSTSAYTASITRSAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...AGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGCCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTASSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGGC...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229251.7
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
CDS-3UTR CAA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGCCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTASSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGGC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229251.7
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
CDS-3UTR CAA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGATGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACATGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACTGCTGCTCCTTGTGTaGGTTGGCACGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: SCRTLRRARASSNTAYGILLLLV*VGTAHL
Trigger: CAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAG...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCTGCTGCTCCTTGTGTaGGTTGGCACGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPLLLLV*VGTAHL
Trigger: CAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLGWRW*VPGAGS
Trigger: GGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGCTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQLGWRW*VPGAGS
Trigger: GGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAG...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCTCCCTCGGAGCCCCTaGCCCTTTGAGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPLPRSP*PFEAFL
Trigger: CAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGDLDQI*ALPRSP
Trigger: GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGTTCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQFSSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGAA...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCAACCACAATGCCCTCTaGCTCCATACGTCATCCAAT +
Preference number: 5 (lower is better)
Translates to: SRWLRWSREPRSTSAYTANHNAL*LHTSSN
Trigger: ATTGGATGACGTATGGAGCAAGAGGGCATTGTGGTT...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
CDS TCA 90 bp CCTGGTTCTGCCCTGTCACCTTCACTTCCGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCTCAGGATGTCCAGAGAGGATGCAAA +
Preference number: 5 (lower is better)
Translates to: PGSALSPSLPHSSLH*VWGTWAQDVQRGCK
Trigger: TTTGCATCCTCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543537.5
CDS CCA 90 bp AGGTCCCCGATGGCTGGTCGGATGGGAAGCACAAGGCTGAGGGACTaGATTGTAAAGGCACTAAGTCGGTTCTGCGGTGAGGAATCAGAC +
Preference number: 5 (lower is better)
Translates to: RSPMAGRMGSTRLRD*IVKALSRFCGEESD
Trigger: GTCTGATTCCTCACCGCAGAACCGACTTAGTGCCTTTACAATCCAGTCCCTCAGCCTTGTGCTTCCCATCCGACCAGCCATCGGGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
ENST00000544316.1
CDS-3UTR CAA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQLSVGD*GSGCPE
Trigger: CTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CAACTGAGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: QLRGVEAYSSEPLLVEEDASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...ATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR CAA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCCAGCGCTGCCCCCTaGGCCGACTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: LRRARASSNTAYGIHFTLASAAP*ADLARS
Trigger: GCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGC...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PHITQGKSLQQHCIWDTLCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...AAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCTGCTGCTCCTTGTGTaGGTTGGCACGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGLLLLV*VGTAHL
Trigger: CAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAG...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGPFEAF*LGWRWL
Trigger: CAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGG...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCTCCCTCGGAGCCCCTaGCCCTTTGAGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGLPRSP*PFEAFL
Trigger: CAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAG...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCTCCCTCGGAGCCCCTaGCCCTTTGAGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQLPRSP*PFEAFL
Trigger: CAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS CCA 90 bp AGAGCTGCAAGGAAAGAGGATGTGAAGCTAGAGGTCCCCGATGGCTaGTCGGATGGGAAGCACAAGGCTGAGGGACTGGATTGTAAAGGC +
Preference number: 5 (lower is better)
Translates to: RAARKEDVKLEVPDG*SDGKHKAEGLDCKG
Trigger: GCCTTTACAATCCAGTCCCTCAGCCTTGTGCTTCCCATCCGACCAGCCATCGGGGACCTCTAGCTTCACATCCTCTTTCCTTGCAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
ENST00000544316.1
CDS CCA 90 bp ACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCCCTCGGAGCCTCACTCTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: TPHPQGGNDSPFNST*TKSWRSLGASLSIC
Trigger: GCAGATTGAGAGTGAGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538410.5
CDS-3UTR CAA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AGCGTATGTCCCATAAGCAAACACTGTGAGCAGCCGGAAGGTAGAGGCAAAGTCGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: SVCPISKHCEQPEGRGKVAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...GACTTTGCCTCTACCTTCCGGCTGCTCACAGTGTTTGCTTATGGGACATACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR CAA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGCCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQASSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGGC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229251.7
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
CDS-3UTR CAA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACCCCAGCTGCTGCTCCTaGTGTTGGTTGGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDPSCCS*CWLARL
Trigger: GAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGG...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLDLDQI*ALPRSP
Trigger: GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDDLDQI*ALPRSP
Trigger: GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTC...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: TPVGYAPDRATPIRATHLSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCTTCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: NGTEVLALDVPPDAVVNLFSSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGAA...GAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLSVGD*GSGCPE
Trigger: CTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGCTGCTGCTCCTTGTGTaGGTTGGCACGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: RASSNTAYGIHFTLAARVLLLLV*VGTAHL
Trigger: CAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAG...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACCCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYPFEAF*LGWRWL
Trigger: CAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGG...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTTCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: RWSREPRSTSAYTASITRFSSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGAA...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GTCAGCGTATGTCCCATAAGCAAACACTGTGAGCAGCCGGAAGGTAGAGGCAAATCACTCTCAGCCAGCTaGGCCTTCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: VSVCPISKHCEQPEGRGKSLSAS*AFQSAG
Trigger: CCCAGCACTTTGGAAGGCCAAGCTGGCTGAGAGTGA...TTTGCCTCTACCTTCCGGCTGCTCACAGTGTTTGCTTATGGGACATACGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS TCA 90 bp TGCATATGGGATACACTGGGGCCGCGGAGATCAGGCCAGGATTTGTaGCGCTCCGTAGTAGAGAAGGGCTTCCAAAAATCTTCCCTCCTT +
Preference number: 5 (lower is better)
Translates to: CIWDTLGPRRSGQDL*RSVVEKGFQKSSLL
Trigger: AAGGAGGGAAGATTTTTGGAAGCCCTTCTCTACTACGGAGCGTCACAAATCCTGGCCTGATCTCCGCGGCCCCAGTGTATCCCATATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542630.1
CDS-3UTR CAA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGASSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229251.7
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
CDS-3UTR CAA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCCTGCTGCTCCTTGTGTaGGTTGGCACGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISLLLLV*VGTAHL
Trigger: CAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAG...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFDLDQI*ALPRSP
Trigger: GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTC...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACAAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTTCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: GYAPDRATPIRATHLLNDFSSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGAA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS TCA 90 bp TTAGCAGCCAGGGTGACAACTGAGAGGTGTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCAGCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: LAARVTTERCRSLFF*ASVSGGRFRASAGS
Trigger: GCTTCCAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542150.5
CDS-3UTR CAA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: LRRARASSNTAYGIHFTLAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GTCAGGACTCAGGCTGCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTGCCCCCTTGGCCGACTaGGCTAGGAGCAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: VRTQAASSDCKLTLPLLCAPLAD*ARSRNC
Trigger: GCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGC...ACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGCAGCCTGAGTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CAA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGCCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEASSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGGC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229251.7
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
CDS-3UTR CAA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGTTCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: FNSTWTKSWRSLGAPCPLFSSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGAA...CAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATATTCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: SCRTLRRARASSNTAYGIFSSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGAA...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS TCA 90 bp GTCGGTTCTGCGGTGAGGAATCAGACATGGAGCGGTCTAAAATTCTaGTCTAGGAATCCTAAAGTCAGCCACTTCGCAAGGCTGCCACAC +
Preference number: 5 (lower is better)
Translates to: VGSAVRNQTWSGLKF*SRNPKVSHFARLPH
Trigger: GTGTGGCAGCCTTGCGAAGTGGCTGACTTTAGGATTCCTAGATCAGAATTTTAGACCGCTCCATGTCTGATTCCTCACCGCAGAACCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
CDS-3UTR CAA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLASSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229251.7
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
CDS-3UTR CAA 90 bp GAGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCAGCTAAGTAGTCAGCGTATGCTACCCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: EPLLVEEDSGLQLSSQRMLPSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGGGTAG...CATACGCTGACTACTTAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
CDS-3UTR CAA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAATGTCCAGAGCCCCATaGAAGCTTACACGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LRRARASSNTAYGIHFTLMSRAP*KLTRGS
Trigger: GGAGCCACGTGTAAGCTTCAATGGGGCTCTGGACAT...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543939.5
CDS-3UTR CAA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: ARASSNTAYGIHFTLAARSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTATCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGTTCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: RASSNTAYGIHFTLAARVFSSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGAA...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp CTGAGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATTCCTTCCACTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LRGVEAYSSEPLLVEEDSFHSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGTGGAA...GGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR CAA 90 bp TTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATTGTAAATGTCTCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LVPHCQHVRTQAASSDCKCLSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGAGACA...TTTACAATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CAA 90 bp TTGATACTCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTTAACTCTGCCACTTTaGTGTGAACGGTTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LILFSSTLSACQDSGCLLLTLPL*CERFSL
Trigger: CAGAGAGAACCGTTCACACAAAAGTGGCAGAGTTAA...GAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGAGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CAA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTATTCAGCTCTCTAACATaGGGCATGTCCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LRRARASSNTAYGIHFTLFSSLT*GMSSSS
Trigger: AGAACTGCTGGACATGCCCAATGTTAGAGAGCTGAA...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CAA 90 bp TTCTCTGCCTCTCTGATCACTCTTCACATAGGAAGGGCTCATTTCCACCTTCAGTCCACCTTCAGGCTTTaGTTTACACTATTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: FSASLITLHIGRAHFHLQSTFRL*FTLFSQ
Trigger: TTGGGAGAATAGTGTAAACAAAAGCCTGAAGGTGGA...CTGAAGGTGGAAATGAGCCCTTCCTATGTGAAGAGTGATCAGAGAGGCAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
CDS GCA 90 bp TTCAGGCTTTTGTTTACACTATTCTCCCAAACCACAATGCCCTCTTaGTCCATACGTCATCCAATTCCTACCCTCTCTAACATTGGGCAT +
Preference number: 5 (lower is better)
Translates to: FRLLFTLFSQTTMPS*SIRHPIPTLSNIGH
Trigger: ATGCCCAATGTTAGAGAGGGTAGGAATTGGATGACGTATGGAGCAAGAGGGCATTGTGGTTTGGGAGAATAGTGTAAACAAAAGCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546229.5
CDS CCA 72 bp GTCCAGAGCCTGGGTCAGGCTCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCGCACCGGGCGGGGCCG +
Preference number: 6 (lower is better)
Translates to: VQSLGQALRAAT*KLRPPAHRAGP
Trigger: CGGCCCCGCCCGGTGCGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGCTCTGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000537022.5
ENST00000538410.5
ENST00000543155.6
CDS CCA 72 bp CGTCGTACCCTGGGTCAGGCTCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCGCACCGGGCGGGGCCG +
Preference number: 6 (lower is better)
Translates to: RRTLGQALRAAT*KLRPPAHRAGP
Trigger: CGGCCCCGCCCGGTGCGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGGTACGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000540408.5
CDS GCA 72 bp CCCGCCGACTGCTTCGTCGTACCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGCTTCGACCTCCAGCGC +
Preference number: 6 (lower is better)
Translates to: PADCFVVPWVRL*GPLPGSFDLQR
Trigger: GCGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCAGTCGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539735.5
ENST00000540408.5
ENST00000543939.5
CDS CCA 72 bp TCCGCCCCCTCCCTTAAAGACACCGCCCAGCGACCGTaGGCTCCCGCCGACTGCTTCGTCGTACCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: SAPSLKDTAQRP*APADCFVVPWV
Trigger: GACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGTGTCTTTAAGGGAGGGGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539735.5
ENST00000540408.5
ENST00000543939.5
CDS GCA 72 bp CTTGGGCTCAGGATGTCCAGAGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGCTTCGACCTCCAGCGC +
Preference number: 6 (lower is better)
Translates to: LGLRMSRAWVRL*GPLPGSFDLQR
Trigger: GCGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCTGAGCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000537022.5
ENST00000538410.5
ENST00000543155.6
CDS CAA 90 bp GTCACCTTCACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGCCTGGGTCAGGCTCTGCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: VTFTSALITALSVGD*GSGCPEPGSGSAGR
Trigger: GCGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000543155.6
CDS CAA 72 bp ACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGACGTGGCTCCGCCCC +
Preference number: 6 (lower is better)
Translates to: TSALITALSVGD*GSGCPETWLRP
Trigger: GGGGCGGAGCCACGTCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000540408.5
CDS TCA 72 bp TGCAAAGGAGAAATGGGTGTCGCATGGTGTCCACCCTaGCGACGCTCCCTCAGCTCTCCATTGCTGCCCCGC +
Preference number: 6 (lower is better)
Translates to: CKGEMGVAWCPP*RRSLSSPLLPR
Trigger: GCGGGGCAGCAATGGAGAGCTGAGGGAGCGTCGTCAGGGTGGACACCATGCGACACCCATTTCTCCTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534947.5
ENST00000536872.5
CDS GCA 72 bp GGAGCCTCACTCTCAATCTGCTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGC +
Preference number: 6 (lower is better)
Translates to: GASLSICCFRPS*CSLCWLARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGAGTGAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538410.5
CDS GCA 72 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTaGATATGGGATACACTGGGGCCGCGGAGATCAGGC +
Preference number: 6 (lower is better)
Translates to: PHITQGKSLQQH*IWDTLGPRRSG
Trigger: GCCTGATCTCCGCGGCCCCAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542630.1
CDS CCA 72 bp CCAAGCCTTTCCTGCCACCTCCCTGAAGAGTCGCTCTaGCCACTAAACTCTATGGCGGGCTTCCGGCCGTAC +
Preference number: 6 (lower is better)
Translates to: PSLSCHLPEESL*PLNSMAGFRPY
Trigger: GTACGGCCGGAAGCCCGCCATAGAGTTTAGTGGCCAGAGCGACTCTTCAGGGAGGTGGCAGGAAAGGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626119.2
CDS CAA 72 bp ACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGCCTGACGACGCTCCC +
Preference number: 6 (lower is better)
Translates to: TSALITALSVGD*GSGCPEPDDAP
Trigger: GGGAGCGTCGTCAGGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534877.5
ENST00000546229.5
CDS CAA 90 bp GTCACCTTCACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGCCTGACGACGCTCCCTCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: VTFTSALITALSVGD*GSGCPEPDDAPSAL
Trigger: GAGAGCTGAGGGAGCGTCGTCAGGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534877.5
ENST00000546229.5
CDS TCA 72 bp GCCCTGTCACCTTCACTTCCGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCTCAGGATGTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: ALSPSLPHSSLH*VWGTWAQDVQS
Trigger: GCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000536872.5
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000538753.5
ENST00000541866.5
ENST00000543155.6
ENST00000543170.5
ENST00000543939.5
ENST00000544316.1
ENST00000544725.5
ENST00000546229.5
ENST00000626119.2
CDS TCA 72 bp TCCGGCAGCTGTTCCAAGCCTTTCCTGCCACCTCCCTaGAGAGTCGCTCTGGCCACTAAACTCTATGGCGGG +
Preference number: 6 (lower is better)
Translates to: SGSCSKPFLPPP*RVALATKLYGG
Trigger: CCCGCCATAGAGTTTAGTGGCCAGAGCGACTCTTCAGGGAGGTGGCAGGAAAGGCTTGGAACAGCTGCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626119.2
CDS GCA 72 bp GCTGCCCCCTTGGCCGACTTGGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTCACCTTCACTTCCGCA +
Preference number: 6 (lower is better)
Translates to: AAPLADLARSRN*SWFCPVTFTSA
Trigger: TGCGGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000536872.5
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000538753.5
ENST00000539735.5
ENST00000540408.5
ENST00000541866.5
ENST00000543155.6
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000544316.1
ENST00000544725.5
ENST00000546229.5
ENST00000626119.2
CDS CCA 72 bp GGGCTCAGGATGTCCAGAGAGGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCACCCTGACGACGCTCCC +
Preference number: 6 (lower is better)
Translates to: GLRMSREDAKEK*VSHGVHPDDAP
Trigger: GGGAGCGTCGTCAGGGTGGACACCATGCGACACCCATTTCTCCTTTGCATCCTCTCTGGACATCCTGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543537.5
CDS CAA 72 bp ACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGCCTGGGTCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: TSALITALSVGD*GSGCPEPGSGS
Trigger: AGAGCCTGACCCAGGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000543155.6
CDS CAA 90 bp GTCACCTTCACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGCTGGAAGCTTCGACCTCCAGCGCA +
Preference number: 6 (lower is better)
Translates to: VTFTSALITALSVGD*GSGCPELEASTSSA
Trigger: TGCGCTGGAGGTCGAAGCTTCCAGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229251.7
ENST00000543170.5
ENST00000626119.2
CDS TCA 72 bp GCCCTGTCACCTTCACTTCCGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCTCAGGATGTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: ALSPSLPHSSLH*VWGTWAQDVQR
Trigger: TCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539735.5
ENST00000540408.5
ENST00000543537.5
CDS CCA 72 bp TGTCCAGAGCCCAAGACACAGGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCACCCTGACGACGCTCCC +
Preference number: 6 (lower is better)
Translates to: CPEPKTQDAKEK*VSHGVHPDDAP
Trigger: GGGAGCGTCGTCAGGGTGGACACCATGCGACACCCATTTCTCCTTTGCATCCTGTGTCTTGGGCTCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538753.5
CDS CCA 72 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTaGGGCCGCGGAGATCAGGCCAGGATTTGTGACGCT +
Preference number: 6 (lower is better)
Translates to: ARASSNTAYGIH*GRGDQARICDA
Trigger: AGCGTCACAAATCCTGGCCTGATCTCCGCGGCCCCAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542630.1
CDS CAA 72 bp ACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGCTGGAAGCTTCGACC +
Preference number: 6 (lower is better)
Translates to: TSALITALSVGD*GSGCPELEAST
Trigger: GGTCGAAGCTTCCAGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229251.7
ENST00000543170.5
ENST00000626119.2
CDS CAA 90 bp GTCACCTTCACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGCCCAAGACACAGGATGCAAAGGAG +
Preference number: 6 (lower is better)
Translates to: VTFTSALITALSVGD*GSGCPEPKTQDAKE
Trigger: CTCCTTTGCATCCTGTGTCTTGGGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538753.5
CDS CCA 72 bp CCCTTGGCCGACTTGGCTAGGAGCAGAAATTGCTCCTaGTTCTGCCCTGTCACCTTCACTTCCGCACTCATC +
Preference number: 6 (lower is better)
Translates to: PLADLARSRNCS*FCPVTFTSALI
Trigger: GATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000536872.5
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000538753.5
ENST00000539735.5
ENST00000540408.5
ENST00000541866.5
ENST00000543155.6
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000544316.1
ENST00000544725.5
ENST00000546229.5
ENST00000626119.2
CDS CCA 72 bp CCATTGAACCCCAAGACACAGGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCACCCTGACGACGCTCCC +
Preference number: 6 (lower is better)
Translates to: PLNPKTQDAKEK*VSHGVHPDDAP
Trigger: GGGAGCGTCGTCAGGGTGGACACCATGCGACACCCATTTCTCCTTTGCATCCTGTGTCTTGGGGTTCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
CDS CCA 72 bp AGGAAAGAGGATGTGAAGCTAGAGGTCCCCGATGGCTaGTCGGATGGGAAGCACAAGGCTGAGGGACTGGAT +
Preference number: 6 (lower is better)
Translates to: RKEDVKLEVPDG*SDGKHKAEGLD
Trigger: ATCCAGTCCCTCAGCCTTGTGCTTCCCATCCGACCAGCCATCGGGGACCTCTAGCTTCACATCCTCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
ENST00000544316.1
CDS CCA 72 bp CCCCAGGGAGGAAACGACAGTCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCCCTCGGAGCCTCACTC +
Preference number: 6 (lower is better)
Translates to: PQGGNDSPFNST*TKSWRSLGASL
Trigger: GAGTGAGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTTCCTCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538410.5
CDS CAA 72 bp ACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGCTGCAAGGAAAGAGG +
Preference number: 6 (lower is better)
Translates to: TSALITALSVGD*GSGCPELQGKR
Trigger: CCTCTTTCCTTGCAGCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
ENST00000544316.1
CDS CAA 90 bp GACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTCCCTCGGAGCCTCACTCTCAATCTG +
Preference number: 6 (lower is better)
Translates to: DPTSPGRKRQSFQFD*DQILALPRSLTLNL
Trigger: CAGATTGAGAGTGAGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538410.5
CDS GCA 72 bp GCCGACTTGGCTAGGAGCAGAAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCCGCACTCATCACTGCA +
Preference number: 6 (lower is better)
Translates to: ADLARSRNCSWF*PVTFTSALITA
Trigger: TGCAGTGATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGCCAAGTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000536872.5
ENST00000537022.5
ENST00000538375.5
ENST00000538410.5
ENST00000538753.5
ENST00000539735.5
ENST00000540408.5
ENST00000541866.5
ENST00000543155.6
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000544316.1
ENST00000544725.5
ENST00000546229.5
ENST00000626119.2
CDS CCA 72 bp ATGGCTGGTCGGATGGGAAGCACAAGGCTGAGGGACTaGATTGTAAAGGCACTAAGTCGGTTCTGCGGTGAG +
Preference number: 6 (lower is better)
Translates to: MAGRMGSTRLRD*IVKALSRFCGE
Trigger: CTCACCGCAGAACCGACTTAGTGCCTTTACAATCCAGTCCCTCAGCCTTGTGCTTCCCATCCGACCAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
ENST00000544316.1
CDS CAA 72 bp TCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTCCCTCGGAGCCTCACT +
Preference number: 6 (lower is better)
Translates to: SPGRKRQSFQFD*DQILALPRSLT
Trigger: AGTGAGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538410.5
CDS CAA 90 bp GTCACCTTCACTTCCGCACTCATCACTGCACTGAGTGTGGGGGACTaGGGCTCAGGATGTCCAGAGAGGATGCAAAGGAGAAATGGGTGT +
Preference number: 6 (lower is better)
Translates to: VTFTSALITALSVGD*GSGCPERMQRRNGC
Trigger: ACACCCATTTCTCCTTTGCATCCTCTCTGGACATCCTGAGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAAGTGAAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543537.5
CDS CCA 72 bp AACGACAGTCCTTTCAATTCGACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCTCACTCTCAATCTGCTGC +
Preference number: 6 (lower is better)
Translates to: NDSPFNSTWTKS*RSLGASLSICC
Trigger: GCAGCAGATTGAGAGTGAGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538410.5
CDS TCA 72 bp GCGGTGAGGAATCAGACATGGAGCGGTCTAAAATTCTaGTCTAGGAATCCTAAAGTCAGCCACTTCGCAAGG +
Preference number: 6 (lower is better)
Translates to: AVRNQTWSGLKF*SRNPKVSHFAR
Trigger: CCTTGCGAAGTGGCTGACTTTAGGATTCCTAGATCAGAATTTTAGACCGCTCCATGTCTGATTCCTCACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
ENST00000544316.1
CDS GCA 72 bp CTGAGGGACTGGATTGTAAAGGCACTAAGTCGGTTCTaGGGTGAGGAATCAGACATGGAGCGGTCTAAAATT +
Preference number: 6 (lower is better)
Translates to: LRDWIVKALSRF*GEESDMERSKI
Trigger: AATTTTAGACCGCTCCATGTCTGATTCCTCACCGCAGAACCGACTTAGTGCCTTTACAATCCAGTCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000534947.5
ENST00000536872.5
ENST00000541866.5
ENST00000544316.1
CDS GCA 72 bp TTGTTTACACTATTCTCCCAAACCACAATGCCCTCTTaGTCCATACGTCATCCAATTCCTACCCTCTCTAAC +
Preference number: 6 (lower is better)
Translates to: LFTLFSQTTMPS*SIRHPIPTLSN
Trigger: GTTAGAGAGGGTAGGAATTGGATGACGTATGGAGCAAGAGGGCATTGTGGTTTGGGAGAATAGTGTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5