RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COPS7A (Homo sapiens)

Ensembl gene IDs: ENSG00000111652

Ensembl transcript IDs: ENST00000229251.7, ENST00000455113.6, ENST00000534877.5, ENST00000534947.5, ENST00000536872.5, ENST00000537022.5, ENST00000538375.5, ENST00000538410.5, ENST00000538753.5, ENST00000539735.5, ENST00000540408.5, ENST00000541866.5, ENST00000542150.5, ENST00000542630.1, ENST00000543155.6, ENST00000543170.5, ENST00000543537.5, ENST00000543939.5, ENST00000544316.1, ENST00000544725.5, ENST00000546229.5, ENST00000626119.2

Found 971 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGAGCTGGTTCCCTCAGCTCAGTCAGG +
Preference number: 1 (lower is better)
Translates to: ALPRSPLPFEAFLLG*RWLVPGAGSLSSVR
Trigger: CCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGCCAGGAGCTGGTTCCCTCAGCTCAG +
Preference number: 1 (lower is better)
Translates to: SWRSLGAPCPLRLSC*AGAGWCQELVPSAQ
Trigger: CTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp GCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCT +
Preference number: 1 (lower is better)
Translates to: AGCPARCCSQPRAAG*AGPGSHEARQHTQP
Trigger: AGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR TCA 90 bp CCTCACAGCCCACACACCATTCCTGCAGGGTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCT +
Preference number: 1 (lower is better)
Translates to: PHSPHTIPAGFGQWH*GPGAGCPARCCSQP
Trigger: AGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGGCTGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp GCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTTGCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: APCPLRLSCWAGAGW*QELVPSAQSGVAQG
Trigger: ACCCTGAGCAACACCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTTGCTCAG +
Preference number: 1 (lower is better)
Translates to: GAPCPLRLSCWAGAG*CQELVPSAQSGVAQ
Trigger: CTGAGCAACACCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATaGCTGACAGCACGACCTCACAGCCCACACACCATTCCTGCAGGG +
Preference number: 1 (lower is better)
Translates to: AAAPCVGWHGSPAPQ*LTARPHSPHTIPAG
Trigger: CCCTGCAGGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR TCA 90 bp CTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCCCACACACCATTCCTGCAGGGTTCG +
Preference number: 1 (lower is better)
Translates to: LLLVLVGTAHLLLNA*QHDLTAHTPFLQGS
Trigger: CGAACCCTGCAGGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp TTCAGGCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCAT +
Preference number: 1 (lower is better)
Translates to: FRPSCCSLCWLARLT*SSMPDSTTSQPTHH
Trigger: ATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 90 bp TCTCAATCTGCTGCTTCAGGCCCAGCTGCTGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCAC +
Preference number: 1 (lower is better)
Translates to: SQSAASGPAAAPCVG*HGSPAPQCLTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 90 bp GGCACAGAAGGCTCTCTGAGGACTCCTAAGAGGCAGGCAGGCAGCTaGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTC +
Preference number: 1 (lower is better)
Translates to: GTEGSLRTPKRQAGS*DPTSPGRKRQSFQF
Trigger: GAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTGCCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR TCA 90 bp CCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCTGCTGCCGTCGTAACTTTAATGGTT +
Preference number: 1 (lower is better)
Translates to: PGAGSLSSVRCCSGS*DVAAAAAAVVTLMV
Trigger: AACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACACCTGACTGAGCTGAGGGAACCAGCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 90 bp TTAAGGTTGGCAACCTCACTCTCAATCTGCTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATG +
Preference number: 1 (lower is better)
Translates to: LRLATSLSICCFRPS*CSLCWLARLTCSSM
Trigger: CATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGAGTGAGGTTGCCAACCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 2 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 2 (lower is better)
Translates to: SWRSLGAPCPLRLSCWAGSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: SWRSLGAPCPLRLSCWAGSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 2 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 2 (lower is better)
Translates to: ALPRSPLPFEAFLLGWRWCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CAA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTaGGTGCCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: RSPLPFEAFLLGWRW*VPGAGSLSSVRCCS
Trigger: TGAGCAACACCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 2 (lower is better)
Translates to: AAAPCVGWHGSPAPQCLTSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...TGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 2 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 2 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: SRWLRWSREPRSTSAYTATRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 2 (lower is better)
Translates to: RSPLPFEAFLLGWRWLVPRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...TGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: QFDLDQILALPRSPLPFEWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: SWRSLGAPCPLRLSCWAGRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: GAGCPARCCSQPRAAGCASQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 2 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 2 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 2 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CGACAGTCCTTTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RQSFQFDLDQILALPRSPSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CAA 90 bp CTCTCAATCTGCTGCTTCAGGCCCAGCTGCTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCA +
Preference number: 2 (lower is better)
Translates to: LSICCFRPSCCSLCW*ARLTCSSMPDSTTS
Trigger: TGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: AAAPCVGWHGSPAPQCLTAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...TGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: SWRSLGAPCPLRLSCWAGSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 2 (lower is better)
Translates to: ALPRSPLPFEAFLLGWRWSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...CCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGACAGTCCTTTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 2 (lower is better)
Translates to: RQSFQFDLDQILALPRSPGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp AAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 2 (lower is better)
Translates to: KSWRSLGAPCPLRLSCWALARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 2 (lower is better)
Translates to: FNSTWTKSWRSLGAPCPLAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...CAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: SRWLRWSREPRSTSAYTANRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAACCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 2 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: HHSCRVRAMALRSWRWMSSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 2 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 2 (lower is better)
Translates to: RSPLPFEAFLLGWRWLVPSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...TGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGACCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 2 (lower is better)
Translates to: QFDLDQILALPRSPLPFECFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGACAGTCCTTTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 2 (lower is better)
Translates to: RQSFQFDLDQILALPRSPGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 2 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: AAAPCVGWHGSPAPQCLTSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...TGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCAAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 2 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CGACAGTCCTTTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 2 (lower is better)
Translates to: RQSFQFDLDQILALPRSPCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...GGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 2 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQETGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQELRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: KSWRSLGAPCPLRLSCWAYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 2 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: GYAPDRATPIRATHLLNDVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 2 (lower is better)
Translates to: QFDLDQILALPRSPLPFESLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGATACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp GAGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCAGCTAAGTAGTCAGCGTATGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: EPLLVEEDSGLQLSSQRMSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CATACGCTGACTACTTAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
3UTR-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp TCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATTGTTCTGCCACTTTTGTGTaGACGGTTCTCTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: SLVPHCQHVRTQAASSDCSATFV*TVLSAV
Trigger: CACAGCAGAGAGAACCGTTCACACAAAAGTGGCAGA...ACAATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
3UTR-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 2 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp CAACTGAGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATCACTCTCAGCCAGCTTaGCCTTCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: QLRGVEAYSSEPLLVEEDHSQPA*PSKVLG
Trigger: TCCCAGCACTTTGGAAGGCCAAGCTGGCTGAGAGTG...ATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 2 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
3UTR-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR GCA 90 bp CTGAGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGTTAGTGGAGGAAGATTCCCCGCACCCAGCCAAGTaGTTCTTTTTCATCACTTTG +
Preference number: 2 (lower is better)
Translates to: LRGVEAYSSEPLLVEEDSPHPAK*FFFITL
Trigger: CAAAGTGATGAAAAAGAAGCACTTGGCTGGGTGCGG...GGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537022.5
3UTR-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 2 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR CCA 72 bp TCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGCCAGGAGCTGGTTCCC +
Preference number: 3 (lower is better)
Translates to: SLGAPCPLRLSC*AGAGWCQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR TCA 72 bp CCACACACCATTCCTGCAGGGTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGT +
Preference number: 3 (lower is better)
Translates to: PHTIPAGFGQWH*GPGAGCPARCC
Trigger: ACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR TCA 72 bp GTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCCCACACACCATTCCTG +
Preference number: 3 (lower is better)
Translates to: VLVGTAHLLLNA*QHDLTAHTPFL
Trigger: CAGGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 72 bp GCAACCTCACTCTCAATCTGCTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGC +
Preference number: 3 (lower is better)
Translates to: ATSLSICCFRPS*CSLCWLARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGAGTGAGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 72 bp CCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCAGCTCAGTCAGGTGTT +
Preference number: 3 (lower is better)
Translates to: PLRLSCWAGAGW*QELVPSAQSGV
Trigger: AACACCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp TTCAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGTGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: FNSTWTKSWRSLGAPCPLCSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...CAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR CCA 72 bp CCCCAGGGAGGAAACGACAGTCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGC +
Preference number: 3 (lower is better)
Translates to: PQGGNDSPFNST*TKSWRSLGAPC
Trigger: GCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTTCCTCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: TPVGYAPDRATPIRATHLRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGGAGCCCCTTGCCCTTaGAGGCTTTCTTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGGAPCP*RLSCWA
Trigger: AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATGCTCCTTGTGTTGGTaGGCACGGCTCACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: IKPFQDCHQASRDGQGQECSLCW*ARLTCS
Trigger: GGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAGGTGTGATCTATGTTaGGGGTTAGGGGAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: GYAPDRATPIRATHLLNDRCDLC*GLGEVK
Trigger: CTTCACCTCCCCTAACCCCAAACATAGATCACACCT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTG +
Preference number: 3 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPFEAF*LGWRWL
Trigger: CAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR CCA 72 bp AACGACAGTCCTTTCAATTCGACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTT +
Preference number: 3 (lower is better)
Translates to: NDSPFNSTWTKS*RSLGAPCPLRL
Trigger: AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
3UTR GCA 72 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTaGATATGGGATACACTTTACTTTAGCAGCCAGGGT +
Preference number: 3 (lower is better)
Translates to: PHITQGKSLQQH*IWDTLYFSSQG
Trigger: ACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR-3UTR CAA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTC +
Preference number: 3 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGSFQFD*DQILAL
Trigger: GAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
3UTR TCA 72 bp AGGGTGACAACTGAGAGGTGTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: RVTTERCRSLFF*ASVSGGRFRAS
Trigger: TGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTGTCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
3UTR TCA 72 bp TGGGATACACTTTACTTTAGCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATTCTTCTGAGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: WDTLYFSSQGDN*EVSKLILLSLC
Trigger: ACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCTGCTAAAGTAAAGTGTATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
CDS-3UTR GCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000543939.5
CDS-3UTR TCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGGCATGGTGTCCACCCTaGCGACGCTCCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPAWCPP*RRSLSS
Trigger: AGAGCTGAGGGAGCGTCGTCAGGGTGGACACCATGC...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536872.5
ENST00000543537.5
CDS-3UTR GCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SRWLRWSREPRSTSAYTAPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCAPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
3UTR CAA 72 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTaGCTGGGCTGGCGCTGGTTGGTGCCAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ALPRSPLPFEAF*LGWRWLVPGAG
Trigger: ACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNAECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SRWLRWSREPRSTSAYTAMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTTGCTTCGTCGTACCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVCFVVP*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCA...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543939.5
CDS-3UTR TCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: HHSCRVRAMALRSWRWMSSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALPRSPLPFEAFLLGWRWAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGAGGTCCCCGATGGCTaGTCGGATGGGAAGCACAAG +
Preference number: 4 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDEVPDG*SDGKHK
Trigger: CTTGTGCTTCCCATCCGACCAGCCATCGGGGACCTC...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR CCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGCTAGAGGTCCCCGATaGCTGGTCGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGARGPR*LVGWEA
Trigger: TGCTTCCCATCCGACCAGCCATCGGGGACCTCTAGC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR TCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: RSPLPFEAFLLGWRWLVPFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACACACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: THHSCRVRAMALRSWRWMSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...CATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: VGWHGSPAPQCLTARPHSSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCAVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VGWHGSPAPQCLTARPHSWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: ALPRSPLPFEAFLLGWRWTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...CCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACCGCCCAGCGACCGTaGGCTCCCGCCGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMTAQRP*APADCF
Trigger: GAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTATTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCACFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GTEVLALDVPPDAVVNLESLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...CTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000538375.5
CDS-3UTR GCA 90 bp TGTGAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCAGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CEQPEGRGKVTLSQLGLPAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...TGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR CCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCCAGGATGTCCAGAGCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRWLRWSREPRSTSAYTAQDVQS*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGCTCTGGACATCCTG...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543170.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: VALVQGATKHVSIHSLNHLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...GTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PLVALVQGATKHVSIHSLVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...GAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VALVQGATKHVSIHSLNHWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GTEVLALDVPPDAVVNLELRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...CTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTTCCTGCCACCTCCCTaGAGAGTCGCTCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTFLPPP*RVALAT
Trigger: AGTGGCCAGAGCGACTCTTCAGGGAGGTGGCAGGAA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543155.6
ENST00000626119.2
CDS-3UTR TCA 90 bp GGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGAAGTCGGTTCTGCGGTaGGGAATCAGACATGGAGCG +
Preference number: 4 (lower is better)
Translates to: GTEVLALDVPPDAVVNLEKSVLR*GIRHGA
Trigger: CGCTCCATGTCTGATTCCTCACCGCAGAACCGACTT...CTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR GCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AAGCAGPGSHEARQHTQPTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...AGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCATTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: AAGCAGPGSHEARQHTQPCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...AGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: AAAPCVGWHGSPAPQCLTAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGIAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000538375.5
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR GCA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTPWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGG...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGGGCTCCCGCCGACTaGTTCGTCGTACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMWAPAD*FVVPWV
Trigger: GACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR CCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: SRWLRWSREPRSTSAYTAPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...GGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNACCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCATTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LQGSGNGTEVLALDVPPDVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...ATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR CCA 90 bp TGTGAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCAAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: CEQPEGRGKVTLSQLGLPRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...TGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR CCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000538375.5
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGAGGATGTCCAGAGCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMRMSRA*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGCTCTGGACATCCT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCTTCGTCGTACCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQCFVVP*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTHSSLH*VWGTWA
Trigger: AGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RWSREPRSTSAYTASITRCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VALVQGATKHVSIHSLNHEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...GTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RWSREPRSTSAYTASITRGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCATTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCAGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCATGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: RSPLPFEAFLLGWRWLVPCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...TGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACACACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: THHSCRVRAMALRSWRWMSLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...CATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGGCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQAWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGC...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000543155.6
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCAGGATGTCCAGAGCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTQDVQS*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGCTCTGGACATCCTG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229251.7
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CRTLRRARASSNTAYGIHPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...GTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACACACCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: THHSCRVRAMALRSWRWMCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATATGCTTCGTCGTACCCTaGGTCAGGCTCTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGICFVVP*VRLCGP
Trigger: CGGCCCGCAGAGCCTGACCCAGGGTACGACGAAGCA...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR TCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCARSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGAGCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: RAAGCAGPGSHEARQHTQSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...CTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAACTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: QFDLDQILALPRSPLPFELLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCANRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNARILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTTCCTGCCACCTCCCTaGAGAGTCGCTCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDFLPPP*RVALAT
Trigger: AGTGGCCAGAGCGACTCTTCAGGGAGGTGGCAGGAA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543155.6
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCATGGTGTCCACCCTaGCGACGCTCCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPAWCPP*RRSLSS
Trigger: AGAGCTGAGGGAGCGTCGTCAGGGTGGACACCATGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR GCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GTCAGCGTATGTCCCATAAGCAAACACTGTGAGCAGCCGGAAGGTAGAGGCAAAGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: VSVCPISKHCEQPEGRGKECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...TTTGCCTCTACCTTCCGGCTGCTCACAGTGTTTGCTTATGGGACATACGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR GCA 90 bp CGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: RTLRRARASSNTAYGIHFECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...AAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: SCRVRAMALRSWRWMSRPSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCAGGATGTCCAGAGCTaGAAGGAAAGAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMQDVQS*KERGCE
Trigger: TTCACATCCTCTTTCCTTGCAGCTCTGGACATCCTG...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR CCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAGGATGTCCAGAGCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSQDVQS*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGCTCTGGACATCCTG...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543170.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGATCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACATCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPHITQGKSLQQHCIWDTSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...TGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: CRVRAMALRSWRWMSRPMPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...CATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
CDS-3UTR CCA 90 bp GGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSGNGTEVLALDVPPDAVDAKEK*VSHGVH
Trigger: GTGGACACCATGCGACACCCATTTCTCCTTTGCATC...TACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536872.5
ENST00000543537.5
CDS-3UTR CCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGACCGCCCAGCGACCGTaGGCTCCCGCCGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARTAQRP*APADCF
Trigger: GAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGT...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGACCGCCCAGCGACCGTaGGCTCCCGCCGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLTAQRP*APADCF
Trigger: GAAGCAGTCGGCGGGAGCCCACGGTCGCTGGGCGGT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMHSSLH*VWGTWA
Trigger: AGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTG...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTGGTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGCPARCCSQPRAAGCAGRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...ACCAGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNASQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTCTGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WSREPRSTSAYTASITRSEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...AGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QFDLDQILALPRSPLPFEAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GAGCPARCCSQPRAAGCAVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...AGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTTCCGCACTCATCACTaGACTGAGTGTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTFRTHH*TECGGL
Trigger: AAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTAGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TACTCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: YSLVPHCQHVRTQAASSDECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...ATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCAAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PHITQGKSLQQHCIWDTLAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...AAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDSLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATGGGCTCCCGCCGACTaGTTCGTCGTACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEWAPAD*FVVPWV
Trigger: GACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539735.5
ENST00000543939.5
CDS-3UTR CCA 90 bp GTCAGCGTATGTCCCATAAGCAAACACTGTGAGCAGCCGGAAGGTAGAGGCAAACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VSVCPISKHCEQPEGRGKPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TTTGCCTCTACCTTCCGGCTGCTCACAGTGTTTGCTTATGGGACATACGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQELRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: RTLRRARASSNTAYGIHFLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...AAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: STWTKSWRSLGAPCPLRLTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...AAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCAGCTAAGTAGTCAGCGTATGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: EPLLVEEDSGLQLSSQRMLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CATACGCTGACTACTTAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR CCA 90 bp GGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTACAAGGCTGAGGGACTaGATTGTAAAGGCACTAAGT +
Preference number: 4 (lower is better)
Translates to: GPGAGCPARCCSQPRAAGTRLRD*IVKALS
Trigger: ACTTAGTGCCTTTACAATCCAGTCCCTCAGCCTTGT...ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGAGGTCCCCGATGGCTaGTCGGATGGGAAGCACAAG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPEVPDG*SDGKHK
Trigger: CTTGTGCTTCCCATCCGACCAGCCATCGGGGACCTC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCCTGAAGAGTCGCTCTaGCCACTAAACTCTATGGCG +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTPEESL*PLNSMA
Trigger: CGCCATAGAGTTTAGTGGCCAGAGCGACTCTTCAGG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626119.2
CDS-3UTR TCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTCATCACTGCACTaGGTGTGGGGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGIHSSLH*VWGTWA
Trigger: AGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTG...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: PHITQGKSLQQHCIWDTLLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...AAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCCAGCTGCTGCTCCTTGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: AQLLLLVLVGTAHLLLNASLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCAAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GWHGSPAPQCLTARPHSPNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...TGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTGGCGCTGGTTGGTGCCAGTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: GAPCPLRLSCWAGAGWCQYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...CTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACTTCCGCACTCATCACTaGACTGAGTGTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: VALVQGATKHVSIHSLNHFRTHH*TECGGL
Trigger: AAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAA...GTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCGAGTGTGGCCAGCGCTaGCCCCTTGGCCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISECGQR*PLGRLG
Trigger: GCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTC...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCGCTGGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: AAGCAGPGSHEARQHTQPSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...AGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQTRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTCCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGATTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: RWSREPRSTSAYTASITRCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPSLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGINACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGITGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCTGGGCTCCCGCCGACTaGTTCGTCGTACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSWAPAD*FVVPWV
Trigger: GACCCAGGGTACGACGAAGCAGTCGGCGGGAGCCCA...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGCAGAAATTGCTCCTaGTTCTGCCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSRNCS*FCPVTF
Trigger: GAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTAAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGAGCCGCTGGTTGCGCTaGTCCAGGGAGCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQSRWLR*SREPRS
Trigger: GCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCT...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACATGGCACTGAGGTCCTaGCGCTGGATGTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDMALRS*RWMSRP
Trigger: CGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCAT...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: HGSPAPQCLTARPHSPHTPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...GGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTCAAGCTTCCCGAGATaGCCAGGGCCAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSSFPR*PGPRKN
Trigger: ATTCTTTCTTGGCCCTGGCCATCTCGGGAAGCTTGA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GKSLQQHCIWDTLYFSSQLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...CTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACCTGCGGGCCGCTACCTaGAAGCTTCGACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDLRAAT*KLRPPA
Trigger: CGCTGGAGGTCGAAGCTTCCAGGTAGCGGCCCGCAG...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTDAKEK*VSHGVH
Trigger: GTGGACACCATGCGACACCCATTTCTCCTTTGCATC...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR CCA 90 bp TGTGAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCACACTCTCAGCCAGCTTaGCCTTCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CEQPEGRGKVTLSQLGLPHSQPA*PSKVLG
Trigger: TCCCAGCACTTTGGAAGGCCAAGCTGGCTGAGAGTG...TGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
3UTR CAA 72 bp TCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGACTaGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SPGRKRQSFQFD*DQILALPRSPL
Trigger: CAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCACTCATCACTGCACTaGGTGTGGGGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQHSSLH*VWGTWA
Trigger: AGCCCAAGTCCCCCACACTCAGTGCAGTGATGAGTG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCAAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQELLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQECCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AATGGCACTGAGGTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: NGTEVLALDVPPDAVVNLDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...GAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATTCCTGCAGGGTTCGGGCAATGGCACTGAGGTCCTGGCGCTGGATGTCCCGGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: PFLQGSGNGTEVLALDVPEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...CGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACGCATGGTGTCCACCCTaGCGACGCTCCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYAWCPP*RRSLSS
Trigger: AGAGCTGAGGGAGCGTCGTCAGGGTGGACACCATGC...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536872.5
ENST00000543537.5
CDS-3UTR GCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCAGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: CEQPEGRGKVTLSQLGLPARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...TGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGITRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTACCTCGAGCCGCTGGTTaGGCTGGTCCAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLPRAAG*AGPGSH
Trigger: GTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGG...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATATCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGISPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGATTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTCTTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: WSREPRSTSAYTASITRSFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...AGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACATGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: LRWSREPRSTSAYTASITCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...TGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGGCTGGCGCTGGTTGGTaGCAGGAGCTGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVAGAGW*QELVPS
Trigger: TGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGC...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCACTGGGGATCAGGCATaGAGGGATGGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGTGDQA*RDGVAE
Trigger: TTCTGCCACCCCATCCCTGCATGCCTGATCCCCAGT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACGTTCCAAGCCTTTCCTaGCACCTCCCTGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: CRTLRRARASSNTAYGIHVPSLS*HLPEES
Trigger: CGACTCTTCAGGGAGGTGGCAGGAAAGGCTTGGAAC...GTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATAGTTCCAAGCCTTTCCTaGCACCTCCCTGAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: SCRTLRRARASSNTAYGIVPSLS*HLPEES
Trigger: CGACTCTTCAGGGAGGTGGCAGGAAAGGCTTGGAAC...TATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455113.6
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACCCCAAGACACAGGATaGAAAGGAGAAATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSPQDTG*KGEMGV
Trigger: GACACCCATTTCTCCTTTGCATCCTGTGTCTTGGGG...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR GCA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTCCCTGGGTCAGGCTCTaGGGGCCGCTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFPWVRL*GPLPGS
Trigger: GCTTCCAGGTAGCGGCCCGCAGAGCCTGACCCAGGG...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540408.5
ENST00000543939.5
CDS-3UTR CCA 90 bp TGTGTTGGTTGGCACGGCTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCAGAAATTGCTCCTaGTTCTGCCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: CVGWHGSPAPQCLTARPHSRNCS*FCPVTF
Trigger: GAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCT...GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGTCTCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: WSREPRSTSAYTASITRSPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...AGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTCCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTATCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: HYAGQEPPATLHMGYTLLLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...AAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACTTCGGGCAATGGCACTaGGGTCCTGGCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDFGQWH*GPGAGC
Trigger: ACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAA...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCTGCTCCTCAATGCCTaGCAGCACGACCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLLLNA*QHDLTA
Trigger: GGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAGCACAGAAGGCTCTCTaGGGACTCCTAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEAQKAL*GLLRGR
Trigger: CCTGCCTCTTAGGAGTCCTCAGAGAGCCTTCTGTGC...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCTTTCTTGCTGGGCTTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: KSWRSLGAPCPLRLSCWASLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...AGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTAGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp ACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTATACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: TPVGYAPDRATPIRATHLYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...TAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CTGCTCAATAGGTCAGGGGTAGGGTATAGGAACTGGGGATCAGGCATGCAGGGAGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LLNRSGVGYRNWGSGMQGDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GTCCTGGCGCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTAGCGGTCTAAAATTCTaGTCTAGGAATCCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: VLALDVPPDAVVNLEPLVSGLKF*SRNPKV
Trigger: GACTTTAGGATTCCTAGATCAGAATTTTAGACCGCT...AACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536872.5
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGAAGTCGGTTCTGCGGTaGGGAATCAGACATGGAGCG +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQKSVLR*GIRHGA
Trigger: CGCTCCATGTCTGATTCCTCACCGCAGAACCGACTT...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAATTGCTCCTGGTTCTaGCCTGTCACCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDNCSWF*PVTFTS
Trigger: GGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTAGCCTCCAGCAACACTaGATATGGGATACACTTTAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTSLQQH*IWDTLY
Trigger: GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGACGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: SLQQHCIWDTLYFSSQGDGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACGGATGTCCCGCCCGATaGTGTAGTCAACCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYGCPAR*CSQPRA
Trigger: GGCTCGAGGTTGACTACAGCATCGGGCGGGACATCC...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTCACCTGCTCCTCAATaGCTGACAGCACGACCTCAC +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQSPAPQ*LTARPH
Trigger: GTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTTCAGGCCCAGCTGCTaGTCCTTGTGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQFRPSC*SLCWLA
Trigger: TGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGTGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATGCTTCAGGCCCAGCTaGTGCTCCTTGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGCFRPS*CSLCWL
Trigger: CAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAGGCTGCGGCTGCTGCTaGCGTCGTAACTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGGCGCC*RRNFNG
Trigger: ACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCC...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCAGATGTGGCTGCGGCTaGTGCTGCCGTCGTAACTTT +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGRCGCG*CCRRNF
Trigger: AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAATCCCTCGGAGCCCCTTaGCCTTTGAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQESLGAP*PLRLSC
Trigger: GCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGA...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: PHITQGKSLQQHCIWDTLPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...AAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000540408.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCTGGATGTCCCGCCCGATGCTGTAGTCAACCTCGAGCCGCTGGTTGCGCTGGTCAGCAACACTGCATATaGGATACACTTTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: AGCPARCCSQPRAAGCAGQQHCI*DTLYFS
Trigger: GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTG...ACCAGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTCAACCTCGAGCCGCTaGTTGCGCTGGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISSTSSR*LRWSRE
Trigger: CTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTCTGAGGTCCTGGCGCTaGATGTCCCGCCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: ITQGKSLQQHCIWDTLYFLRSWR*MSRPML
Trigger: CAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAG...AAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543170.5
ENST00000543537.5
ENST00000543939.5
ENST00000546229.5
ENST00000626119.2
CDS-3UTR CCA 90 bp TTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTATGGGCTGGCGCTGGTTaGTGCCAGGAGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LRRARASSNTAYGIHFTLWAGAG*CQELVP
Trigger: GGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCA...TAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCGCTTTCTTGCTGGGCTaGCGCTGGTTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSAFLLG*RWLVPG
Trigger: TCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGC...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GGTTGCGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACCTTTCAATTCGACTTaGACCAAATCTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GCAGPGSHEARQHTQPQSPFNST*TKSWRS
Trigger: GGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGG...TGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGAACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGTRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCGTAGGGTATAGGAACTaGGGATCAGGCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPVGYRN*GSGMQG
Trigger: TCCCTGCATGCCTGATCCCCAGTTCCTATACCCTAC...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCTGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACGATGCAAAGGAGAAATaGGTGTCGCATGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: AAAHYAGQEPPATLHMGYDAKEK*VSHGVH
Trigger: GTGGACACCATGCGACACCCATTTCTCCTTTGCATC...GTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536872.5
ENST00000543537.5
CDS-3UTR CCA 90 bp TCTTTAGTTCCACACTGTCAGCATGTCAGGACTCAGGCTGCCTCCTCTGATTGTGAGGTCCCCGATGGCTaGTCGGATGGGAAGCACAAG +
Preference number: 4 (lower is better)
Translates to: SLVPHCQHVRTQAASSDCEVPDG*SDGKHK
Trigger: CTTGTGCTTCCCATCCGACCAGCCATCGGGGACCTC...ACAATCAGAGGAGGCAGCCTGAGTCCTGACATGCTGACAGTGTGGAACTAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCTAGAGGTCCCCGATaGCTGGTCGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLARGPR*LVGWEA
Trigger: TGCTTCCCATCCGACCAGCCATCGGGGACCTCTAGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534947.5
CDS-3UTR CCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGTWTKS*RSLGAS
Trigger: TGAGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538410.5
3UTR CAA 72 bp AAACGACAGTCCTTTCAATTCGACTTGGACCAAATCTaGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KRQSFQFDLDQI*ALPRSPLPFEA
Trigger: AGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGAAAGGACTGTCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GAGCAGCCGGAAGGTAGAGGCAAAGTCACTCTCAGCCAGCTTGGCCTTCCAAAGCGAAGCTTATTCTTCTaGGCCTCTGTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EQPEGRGKVTLSQLGLPKRSLFF*ASVSGG
Trigger: TCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCG...CTTTGGAAGGCCAAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537022.5
CDS-3UTR TCA 90 bp CAGGATTCTAGGATGAACATGTCCAGTGACTCCTGGCATGGCAGACTGGCTCCCAGCCAGGGTGACAACTaGGAGGTGTCGAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: QDSRMNMSSDSWHGRLAPSQGDN*EVSKLI
Trigger: AATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCT...GGGAGCCAGTCTGCCATGCCAGGAGTCACTGGACATGTTCATCCTAGAATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTGTTGCTCAGGGTCCTaGGATGTGGCTGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISCCSGS*DVAAAA
Trigger: AGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCGAGCCCCTTGCCCTTTaGGGCTTTCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISEPLAL*GFLAGL
Trigger: CAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACTCCCTAGAGAAGGTGTaGTCTATGTTTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDSLEKV*SMFGVR
Trigger: CCTAACCCCAAACATAGATCACACCTTCTCTAGGGA...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGCTGGTCCAGGGAGCCACGAAGCACGTCAGCATACACAGCCTCAATCACAAGGGTACCAACAAAAACATaGCCTACATTTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RWSREPRSTSAYTASITRVPTKT*PTFASS
Trigger: GGAGGAGGCAAATGTAGGTCATGTTTTTGTTGGTAC...CCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAACAGGGACAGATGCTaGGCTCTTAAGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDNRDRC*ALKETR
Trigger: CCTTGTTTCCTTAAGAGCTCAGCATCTGTCCCTGTT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CAGGCAGCTGGGACCCCACATCCCCAGGGAGGAAACGACAGTCCTTTCAATTCGTACCCACCTACTCAATaGCATGTAATGAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: QAAGTPHPQGGNDSPFNSYPPTQ*HVMNRD
Trigger: GTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTA...CGAATTGAAAGGACTGTCGTTTCCTCCCTGGGGATGTGGGGTCCCAGCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGAGAATTCTCAGGGTGTaGGTAAAGGTGGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQRILRV*VKVGAL
Trigger: TAGGGCCCCCACCTTTACTCACACCCTGAGAATTCT...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp CGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGGATGAACATGTCCAGTaGCTCCTGGCATGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RPPSGLPTYSMTCNEQGQDEHVQ*LLAWQT
Trigger: AGTCTGCCATGCCAGGAGTCACTGGACATGTTCATC...CTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp TGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGGACAGGATTCTAGGATaGACATGTCCAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: WVMLQTERPPSGLPTYSMDRILG*TCPVTP
Trigger: AGGAGTCACTGGACATGTTCATCCTAGAATCCTGTC...CATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp AAACGCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: KRLWVMLQTERPPSGLPTEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...GGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GCCTGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTGAAATGACTGTAGTGTaGCAGGATTCTAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: ACGLCSRQSDPHQGYPPTEMTVV*QDSRMN
Trigger: GTTCATCCTAGAATCCTGTCACACTACAGTCATTTC...AGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR TCA 90 bp GATCTATGTTTGGGGTTAGGGGAGGTGAAGGGTCATGAACCTAGGATTATCAGCTTCCTGCCACCTCCCTaGAGAGTCGCTCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: DLCLGLGEVKGHEPRIISFLPPP*RVALAT
Trigger: AGTGGCCAGAGCGACTCTTCAGGGAGGTGGCAGGAA...GCTGATAATCCTAGGTTCATGACCCTTCACCTCCCCTAACCCCAAACATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543155.6
ENST00000626119.2
CDS-3UTR TCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTGTCCAGAGCCCCATTaGAGCTTACACGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLCPEPH*SLHVAP
Trigger: CGGAGCCACGTGTAAGCTTCAATGGGGCTCTGGACA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543939.5
CDS-3UTR GCA 90 bp GAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGATTCCGCACTCATCACTaGACTGAGTGTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: ERPPSGLPTYSMTCNEQGFRTHH*TECGGL
Trigger: AAGTCCCCCACACTCAGTGCAGTGATGAGTGCGGAA...TCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCGCTAGGAGCAGAAATTaGTCCTGGTTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGARSRN*SWFCPV
Trigger: GACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGC...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAACAAGGTCTTCCAGCTaGCGCACATTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQETRSSS*RTLRRA
Trigger: TGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGT...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: HITQGKSLQQHCIWDTLYPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...GTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp ACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCCCCACACACCATTCCTaGAGGGTTCGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: TQGKSLQQHCIWDTLYFSPTHHS*RVRAMA
Trigger: TGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGG...GCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455113.6
ENST00000536872.5
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTTGGCACGGCTCACCTaGTCCTCAATGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLARLT*SSMPDS
Trigger: GCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AAGGAGATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCTGTGGCTGCGGCTGCTaGTGCCGTCGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: KEIKPFQDCHQASRDGQGCGCGC*CRRNFN
Trigger: ATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACA...GCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CTCACCTGCTCCTCAATGCCTGACAGCACGACCTCACAGCCCACACACCATTCCAACATGACCTACATTTaGCTCCTCCCTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LTCSSMPDSTTSQPTHHSNMTYI*LLPREG
Trigger: ACCTTCTCTAGGGAGGAGGCAAATGTAGGTCATGTT...GGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGAACGCCTGTGGGTTATaGTCCAGACAGAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVNACGL*SRQSDP
Trigger: GGGGTCGCTCTGTCTGGAGCATAACCCACAGGCGTT...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp CAATTCGACTTGGACCAAATCTTGGCGCTCCCTCGGAGCCCCTTGCCCTTTGAGAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: QFDLDQILALPRSPLPFEKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...CTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455113.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp GGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAATGACAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: GYAPDRATPIRATHLLNDKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...GTCATTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGTGGGTTATGCTCCAGACAGAGCGACCCCCATCAGGGCTACCCACCTACTCAAAAACCCTTCCAGGATTaGCATCAAGCTTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: CGLCSRQSDPHQGYPPTQKPFQD*HQASRD
Trigger: ATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTT...TTGAGTAGGTGGGTAGCCCTGATGGGGGTCGCTCTGTCTGGAGCATAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR GCA 90 bp TGCCGCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTCTCCCAAACCACAATaGCCTCTTGCTCCATACGTC +
Preference number: 4 (lower is better)
Translates to: CRTLRRARASSNTAYGIHSPKPQ*PLAPYV
Trigger: GACGTATGGAGCAAGAGGGCATTGTGGTTTGGGAGA...GTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546229.5
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAACCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQEPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GAGCCTCTGTTAGTGGAGGAAGATTCCGGGCTTCAGCTAAGTAGTCAGCGTATGCCCCCTTGGCCGACTTaGCTAGGAGCAGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: EPLLVEEDSGLQLSSQRMPPWPT*LGAEIA
Trigger: AGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGG...CATACGCTGACTACTTAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537022.5
ENST00000546229.5
CDS-3UTR CCA 90 bp AGGACTCAGGCTGCCTCCTCTGATTGTAAATTAACTCTGCCACTTTTGTGTGAACCAGCGCTGCCCCCTTaGCCGACTTGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RTQAASSDCKLTLPLLCEPALPP*PTWLGA
Trigger: TGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGG...TTCACACAAAAGTGGCAGAGTTAATTTACAATCAGAGGAGGCAGCCTGAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544316.1
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCACATTACGCAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTAGCTCCTTGTGTTGGTTaGCACGGCTCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AHYAGQEPPATLHMGYTLAPCVG*HGSPAP
Trigger: AGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGC...TAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGTGCTGCTCCTTGTGTTaGTTGGCACGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARCCSLC*LARLTC
Trigger: GCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCA...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp AGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGGTGGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RASSNTAYGIHFTLAARVVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...CACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGGCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCGTTGGTGCCAGGAGCTaGTTCCCTCAGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QGKSLQQHCIWDTLYFSSVGARS*FPQLSQ
Trigger: CTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAAC...GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543537.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGTTGAGGCTTTCTTGCTaGGCTGGCGCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLLRLSC*AGAGWC
Trigger: GCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAA...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CCATCAGGGCTACCCACCTACTCAATGACATGTAATGAACAGGGACAGATGCTGACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PSGLPTYSMTCNEQGQMLTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...CAGCATCTGTCCCTGTTCATTACATGTCATTGAGTAGGTGGGTAGCCCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp GCAAGAGCCTCCAGCAACACTGCATATGGGATACACTTTACTTTAGCAGCCAGGACTTGGACCAAATCTTaGCGCTCCCTCGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ARASSNTAYGIHFTLAARTWTKS*RSLGAP
Trigger: AGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGT...CCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455113.6
ENST00000538375.5
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp ATTAAACCCTTCCAGGATTGCCATCAAGCTTCCCGAGATGGCCAGGGCCAAGAAACAAGGGAGAGAGCATaGCAGCGGGGAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: IKPFQDCHQASRDGQGQETRERA*QRGAME
Trigger: TTCCATTGCTCCCCGCTGCCATGCTCTCTCCCTTGT...TTCTTGGCCCTGGCCATCTCGGGAAGCTTGATGGCAATCCTGGAAGGGTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229251.7
ENST00000455113.6
ENST00000534877.5
ENST00000534947.5
ENST00000538410.5
ENST00000539735.5
ENST00000543155.6
ENST00000543939.5
ENST00000626119.2
CDS-3UTR CCA 90 bp CAGGATTCTAGGATGAACATGTC