Pregenerated sensors for COPS5 (Homo sapiens)
Ensembl gene IDs: ENSG00000121022Ensembl transcript IDs: ENST00000357849.9, ENST00000517406.1, ENST00000517736.5, ENST00000518374.5, ENST00000518768.1, ENST00000519057.5, ENST00000519963.5, ENST00000521386.5, ENST00000521509.5, ENST00000523086.5, ENST00000523890.5
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGGGTGTAATCCCAGCACTTTaGAAGGCGAAGGCGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: FYVCSHVFICSSLSIYSGVIPAL*KAKAGG Trigger: TCCTCCCGCCTTCGCCTTCCAAAGTGCTGGGATTAC...ACCCGAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523890.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTTGCATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCCCTCCCGATCTGGCATaGATCACCATCTTCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LFCIFYVCSHVFICSSLSPPDLA*ITIFSR Trigger: TCTGCTGAAGATGGTGATGCATGCCAGATCGGGAGG...GCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATGCAAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR GCA 90 bp | TGCATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACCCTCCCGATCTGGCATaGATCACCATCTTCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: CIFYVCSHVFICSSLSIYPPDLA*ITIFSR Trigger: TCTGCTGAAGATGGTGATGCATGCCAGATCGGGAGG...GTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGGGTAGCCATGTATTCATATaGAGCAGCCTGAGCATTTAC | + |
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Preference number: 2 (lower is better) Translates to: FYVCSHVFICSSLSIYSGSHVFI*SSLSIY Trigger: GTAAATGCTCAGGCTGCTGCATATGAATACATGGCT...ACCCGAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTAAGTTGCCTCCCGATCTaGCATGCATCACCATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LHFLCMQPCIHMQQPEHLSCLPI*HASPSS Trigger: TGAAGATGGTGATGCATGCCAGATCGGGAGGCAACT...TAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR CCA 90 bp | GCATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACAGTTGCCTCCCGATCTaGCATGCATCACCATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: ALVSKLEELNVFTQYLFHSCLPI*HASPSS Trigger: TGAAGATGGTGATGCATGCCAGATCGGGAGGCAACT...GTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR TCA 90 bp | TTGCATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTATTTCTAAACCCAACATaGAACTCCCTCGTCCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LHFLCMQPCIHMQQPEHLFLNPT*NSLVPA Trigger: AGCTGGGACGAGGGAGTTTCATGTTGGGTTTAGAAA...TAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACAACTTTCTAAACCCAACATaGAACTCCCTCGTCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LVSKLEELNVFTQYLFHNFLNPT*NSLVPA Trigger: AGCTGGGACGAGGGAGTTTCATGTTGGGTTTAGAAA...GTTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR GCA 90 bp | CATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCAGCCATGTATTCATATaGAGCAGCCTGAGCATTTAC | + |
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Preference number: 2 (lower is better) Translates to: HFLCMQPCIHMQQPEHLLSHVFI*SSLSIY Trigger: GTAAATGCTCAGGCTGCTGCATATGAATACATGGCT...GAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR CCA 90 bp | ATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACAAAGGTTTGTAGCCCTTTaGGTATGTCCTAAAGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: ISKQARRTQRIHPVFIPQRFVAL*VCPKGA Trigger: GGCGCCTTTAGGACATACCCAAAGGGCTACAAACCT...TTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR CCA 90 bp | ATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACAACACCACTGCTACAAATaGTTCCTGGAACTGCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: ISKQARRTQRIHPVFIPQHHCYK*FLELLI Trigger: AATCAGCAGTTCCAGGAACCATTTGTAGCAGTGGTG...TTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR CCA 90 bp | TTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACAACGGATATTGTTCTTGTTaGATCAATCACCACTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: LVSKLEELNVFTQYLFHNGYCSC*INHHCY Trigger: GTAGCAGTGGTGATTGATCCAACAAGAACAATATCC...GTTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR GCA 90 bp | GCATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACTGCATTTTCTATGTATaGAGCCATGTATTCATATGC | + |
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Preference number: 2 (lower is better) Translates to: ALVSKLEELNVFTQYLFHCIFYV*SHVFIC Trigger: GCATATGAATACATGGCTGCATACATAGAAAATGCA...GTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| 3UTR-3UTR CCA 90 bp | ATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACAAGGATATTGTTCTTGTTaGATCAATCACCACTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: ISKQARRTQRIHPVFIPQGYCSC*INHHCY Trigger: GTAGCAGTGGTGATTGATCCAACAAGAACAATATCC...TTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTTGGGGCTGCATTCGCTaGCCCGGAGCGGGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAWGCIR*PGAGAG Trigger: CCCTGCCCCCGCTCCGGGGCAGCGAATGCAGCCCCA...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGGGTCTCGTGGCGGCTaGGTGCGGTGGGGGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAGSRGG*VRWGRC Trigger: GCACCTCCCCCACCGCACCCAGCCGCCACGAGACCC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR TCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTCGCGGATGGGGAGCGTaGGTGGCGAGGTGTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAARGWGA*VARCGL Trigger: CAGGCCACACCTCGCCACTCACGCTCCCCATCCGCG...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGGAGGGTCCTGGGGCTaGATTCGCTGCCCCGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAGGSWG*IRCPGA Trigger: CGCTCCGGGGCAGCGAATGCAGCCCCAGGACCCTCC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGGATTCCTGGGCCACTaGGGTCGCTGCTGCCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAGFLGH*GRCCPR Trigger: CCGCGGGCAGCAGCGACCGCAGTGGCCCAGGAATCC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR TCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGCGAGCCCGCTCCCCTaGGTAAGAGTCAGCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAASPLP*VRVSQP Trigger: CGGCTGGCTGACTCTTACTCAGGGGAGCGGGCTCGC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGAGGGTGGAGGGTCCTaGGGCTGCATTCGCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAEGGGS*GCIRCP Trigger: GGGGCAGCGAATGCAGCCCCAGGACCCTCCACCCTC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR TCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGGGGCGGGAGTTCTGTaGGCAGGGGTCTTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAGAGVL*AGVLQL Trigger: CAGCTGCAAGACCCCTGCTCACAGAACTCCCGCCCC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGATGGGGAGCGTGAGTaGCGAGGTGTGGCCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAADGERE*RGVAWG Trigger: ACCCCAGGCCACACCTCGCCACTCACGCTCCCCATC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTCACGGTCCGGATTCCTaGGCCACTGCGGTCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAHGPDS*ATAVAA Trigger: AGCAGCGACCGCAGTGGCCCAGGAATCCGGACCGTG...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTATCTGGGGGTGGGGGTaGGGTTTCTTGTCGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAIWGWG*GFLSAG Trigger: CCCTGCCGACAAGAAACCCCACCCCCACCCCCAGAT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTACTAGGCCGGCGACGTaGCAGAGTTACAGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAATRPAT*QSYRLW Trigger: CCAGAGCCTGTAACTCTGGCACGTCGCCGGCCTAGT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTAGGTGTGGCCTGGGGTaGTGTAGGTTGAGGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAARCGLG*CRLRVE Trigger: CTCCACCCTCAACCTACACCACCCCAGGCCACACCT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGTCGGGGAGGTTCCCTaGTTACACGGTCCGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAVGEVP*LHGPDS Trigger: GGAATCCGGACCGTGTAACCAGGGAACCTCCCCGAC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR TCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGGTGACTACGAGTTATaGGGGTTGGGGGCGGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAGDYEL*GLGAGV Trigger: AACTCCCGCCCCCAACCCTCATAACTCGTAGTCACC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTAAGGGTGTGGAGAGTTaGGATTTCGCCGCCGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAKGVES*DFAAVR Trigger: CCTCACGGCGGCGAAATCCCAACTCTCCACACCCTT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTCAGAGTTACAGGCTCTaGAATCTGGGGGTGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAQSYRL*NLGVGV Trigger: CACCCCCACCCCCAGATTCCAGAGCCTGTAACTCTG...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTACGAGTTATGAGGGTTaGGGGCGGGAGTTCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAATSYEG*GREFCE Trigger: CTCACAGAACTCCCGCCCCCAACCCTCATAACTCGT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTCCCGAGTTAAGGGTGTaGAGAGTTGGGATTTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAPELRV*RVGISP Trigger: CGGCGAAATCCCAACTCTCCACACCCTTAACTCGGG...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTCCTCCCGATCTGGCATaGATCACCATCTTCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAPPDLA*ITIFSR Trigger: TCTGCTGAAGATGGTGATGCATGCCAGATCGGGAGG...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTAGTTGCCTCCCGATCTaGCATGCATCACCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAASCLPI*HASPSS Trigger: TGAAGATGGTGATGCATGCCAGATCGGGAGGCAACT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTAGGTTTGTAGCCCTTTaGGTATGTCCTAAAGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAARFVAL*VCPKGA Trigger: GGCGCCTTTAGGACATACCCAAAGGGCTACAAACCT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR TCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTTTTCTAAACCCAACATaGAACTCCCTCGTCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAFLNPT*NSLVPA Trigger: AGCTGGGACGAGGGAGTTTCATGTTGGGTTTAGAAA...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTAGTGTTTTCTCCCCTTaGCATCAGGTGTCACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAASVFSP*HQVSLL Trigger: CAGAAGTGACACCTGATGGCAAGGGGAGAAAACACT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGGGGTAATCCCAGCACTTTaGAAGGCGAAGGCGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FLCMQPCIHMQQPEHLLGVIPAL*KAKAGG Trigger: TCCTCCCGCCTTCGCCTTCCAAAGTGCTGGGATTAC...CCCGAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523890.5 |
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| CDS-3UTR GCA 90 bp | TTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGGGCCTCCCGATCTGGCATaGATCACCATCTTCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FLCMQPCIHMQQPEHLLGPPDLA*ITIFSR Trigger: TCTGCTGAAGATGGTGATGCATGCCAGATCGGGAGG...CCCGAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTCACCACTGCTACAAATaGTTCCTGGAACTGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAHHCYK*FLELLI Trigger: AATCAGCAGTTCCAGGAACCATTTGTAGCAGTGGTG...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTAGCCATGTATTCATATaGAGCAGCCTGAGCATTTAC | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAASHVFI*SSLSIY Trigger: GTAAATGCTCAGGCTGCTGCATATGAATACATGGCT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR TCA 90 bp | TTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGGGTTTCTAAACCCAACATaGAACTCCCTCGTCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FLCMQPCIHMQQPEHLLGFLNPT*NSLVPA Trigger: AGCTGGGACGAGGGAGTTTCATGTTGGGTTTAGAAA...CCCGAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTGGATATTGTTCTTGTTaGATCAATCACCACTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAGYCSC*INHHCY Trigger: GTAGCAGTGGTGATTGATCCAACAAGAACAATATCC...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR CCA 90 bp | TGCATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACAGGTTTGTAGCCCTTTaGGTATGTCCTAAAGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CIFYVCSHVFICSSLSIYRFVAL*VCPKGA Trigger: GGCGCCTTTAGGACATACCCAAAGGGCTACAAACCT...GTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTATCAGGTGTCACTTCTaGCTGCTATTAATATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAAIRCHF*LLLIYL Trigger: CAAGTATATTAATAGCAGCCAGAAGTGACACCTGAT...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTTGCATTTTCTATGTATaGAGCCATGTATTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLNSVFSPCHQVSLLAACIFYV*SHVFIC Trigger: GCATATGAATACATGGCTGCATACATAGAAAATGCA...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS-3UTR TCA 90 bp | TTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGGGTTTGGAAGTCAAGACATaGATCGAAATCTTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FYVCSHVFICSSLSIYSGLEVKT*IEILAS Trigger: AGAAGCCAAGATTTCGATTCATGTCTTGACTTCCAA...ACCCGAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518374.5 |
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| CDS-3UTR TCA 90 bp | CATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGACCTTTCCGGGACATaGCGATATAAACAGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HFLCMQPCIHMQQPEHLLDLSGT*RYKQQL Trigger: TAACTGCTGTTTATATCGTCATGTCCCGGAAAGGTC...GAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518374.5 |
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| CDS-3UTR CCA 90 bp | TGCATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCAAGTTGCCTCCCGATCTaGCATGCATCACCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CISKQARRTQRIHPVFIPSCLPI*HASPSS Trigger: TGAAGATGGTGATGCATGCCAGATCGGGAGGCAACT...TGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
||
| CDS-3UTR CCA 90 bp | TTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACAACAGGTTTGTAGCCCTTTaGGTATGTCCTAAAGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSKLEELNVFTQYLFHNRFVAL*VCPKGA Trigger: GGCGCCTTTAGGACATACCCAAAGGGCTACAAACCT...GTTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS-3UTR TCA 90 bp | CTTAAGCAGCCTTACAGAGCAGTCAGTCAACGTCTCTACAAAGCCTTTTTAGATTTGGAAGTCAAGACATaGATCGAAATCTTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKQPYRAVSQRLYKAFLDLEVKT*IEILAS Trigger: AGAAGCCAAGATTTCGATTCATGTCTTGACTTCCAA...ATCTAAAAAGGCTTTGTAGAGACGTTGACTGACTGCTCTGTAAGGCTGCTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517406.1 |
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| CDS-3UTR GCA 90 bp | GCAGCCTTACAGAGCAGTCAGTCAACGTCTCTACAAAGCCTTTTTAGATGTCTGTTAATTCCTAAGCTTTaGCAGATTTCAACCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AALQSSQSTSLQSLFRCLLIPKL*QISTKS Trigger: GCTTTTGGTTGAAATCTGGCAAAGCTTAGGAATTAA...CAGACATCTAAAAAGGCTTTGTAGAGACGTTGACTGACTGCTCTGTAAGGCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517406.1 |
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| CDS-3UTR CCA 90 bp | ATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACAAAGTTGCCTCCCGATCTaGCATGCATCACCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISKQARRTQRIHPVFIPQSCLPI*HASPSS Trigger: TGAAGATGGTGATGCATGCCAGATCGGGAGGCAACT...TTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS-3UTR CCA 90 bp | GCATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACCACCACTGCTACAAATaGTTCCTGGAACTGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALVSKLEELNVFTQYLFHHHCYK*FLELLI Trigger: AATCAGCAGTTCCAGGAACCATTTGTAGCAGTGGTG...GTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS-3UTR CCA 90 bp | CTGTTTTGCATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCGGATATTGTTCTTGTTaGATCAATCACCACTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LFCIFYVCSHVFICSSLSGYCSC*INHHCY Trigger: GTAGCAGTGGTGATTGATCCAACAAGAACAATATCC...GCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATGCAAAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
||
| CDS-3UTR CCA 90 bp | GCAGTCAGTCAACGTCTCTACAAAGCCTTTTTAGATGTCTGCCCACAGAAAGAACATGAATCGAAATCTTaGCTTCTCCCTTTATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AVSQRLYKAFLDVCPQKEHESKS*LLPLSL Trigger: TAAGGATAAAGGGAGAAGCCAAGATTTCGATTCATG...TTCTTTCTGTGGGCAGACATCTAAAAAGGCTTTGTAGAGACGTTGACTGACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517406.1 |
||
| CDS-3UTR GCA 90 bp | TTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGGGTGCATTTTCTATGTATaGAGCCATGTATTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: FLCMQPCIHMQQPEHLLGCIFYV*SHVFIC Trigger: GCATATGAATACATGGCTGCATACATAGAAAATGCA...CCCGAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
||
| CDS-3UTR GCA 90 bp | CATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCACCAGTGGTATAGTCTaGATTAGTAAGCAAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFLCMQPCIHMQQPEHLLTSGIV*ISKQAR Trigger: TCTAGCTTGCTTACTAATGCAGACTATACCACTGGT...GAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS-3UTR TCA 90 bp | GCATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACTTCTTGTTGCTTAAATaGGAACATCTTGTCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALVSKLEELNVFTQYLFHFLLLK*EHLVSE Trigger: TTCCGAGACAAGATGTTCTCATTTAAGCAACAAGAA...GTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518374.5 |
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| CDS-3UTR CCA 90 bp | GCATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACCATGAATCGAAATCTTaGCTTCTCCCTTTATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ALVSKLEELNVFTQYLFHHESKS*LLPLSL Trigger: TAAGGATAAAGGGAGAAGCCAAGATTTCGATTCATG...GTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518374.5 |
||
| CDS-3UTR GCA 90 bp | TTGCATTTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTATGCATTTTCTATGTATaGAGCCATGTATTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: LHFLCMQPCIHMQQPEHLCIFYV*SHVFIC Trigger: GCATATGAATACATGGCTGCATACATAGAAAATGCA...TAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS-3UTR GCA 90 bp | ATTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTATTTATTCCACAAACCAGTGGTATAGTCTaGATTAGTAAGCAAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISKQARRTQRIHPVFIPQTSGIV*ISKQAR Trigger: TCTAGCTTGCTTACTAATGCAGACTATACCACTGGT...TTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518374.5 ENST00000523890.5 |
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| CDS TCA 90 bp | GCGAAGGCGGGAGGATCGCTTGAAGGCAGAAGCTCGAGATCAGCCTaGGCAACACAGCGAGGACCCATTTTCCTTAGTCCAGGGCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AKAGGSLEGRSSRSA*ATQRGPIFLSPGLR Trigger: GCGAAGCCCTGGACTAAGGAAAATGGGTCCTCGCTGTGTTGCTCAGGCTGATCTCGAGCTTCTGCCTTCAAGCGATCCTCCCGCCTTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519057.5 ENST00000523890.5 |
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| CDS TCA 90 bp | GGCTTGATCTCCAGCCCTGCTGTATTCATTCCCCTTAGGCCTGGCTaGTGTCACATGGCGCAAAGGCCCAACCCTCAAATCACATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLISSPAVFIPLRPG*CHMAQRPNPQITWL Trigger: CAACCATGTGATTTGAGGGTTGGGCCTTTGCGCCATGTGACATCAGCCAGGCCTAAGGGGAATGAATACAGCAGGGCTGGAGATCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518768.1 ENST00000519963.5 |
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| CDS CCA 90 bp | TCTCTACAACCAAGACGCAACTTTACCTCGCTAGGTTTCCGGGTGTaGGCCTTGACCCTCCGCACCACGGGAACAAACTCTTACCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLQPRRNFTSLGFRV*ALTLRTTGTNSYLD Trigger: GTCTAGGTAAGAGTTTGTTCCCGTGGTGCGGAGGGTCAAGGCCCACACCCGGAAACCTAGCGAGGTAAAGTTGCGTCTTGGTTGTAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357849.9 |
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| CDS CCA 90 bp | CCAGCCCTGCTGTATTCATTCCCCTTAGGCCTGGCTGATGTCACATaGCGCAAAGGCCCAACCCTCAAATCACATGGTTGGTTTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PALLYSFPLGLADVT*RKGPTLKSHGWFFW Trigger: CCAGAAAAACCAACCATGTGATTTGAGGGTTGGGCCTTTGCGCCATGTGACATCAGCCAGGCCTAAGGGGAATGAATACAGCAGGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000518768.1 ENST00000519963.5 |
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| CDS TCA 90 bp | GACTCGATTTCTGAAAACAGCTGCAATCCCCAGTTTGGGATTAGTTaGAGACCCAAACAAGGTGCATGTCGACACTGGGCTCAAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSISENSCNPQFGIS*RPKQGACRHWAQGR Trigger: CCTACCTTGAGCCCAGTGTCGACATGCACCTTGTTTGGGTCTTCAACTAATCCCAAACTGGGGATTGCAGCTGTTTTCAGAAATCGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000521386.5 ENST00000521509.5 |
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| CDS TCA 90 bp | TGTCCTCATGTATGCAGTGCTGGAATACAGGGACAGACATTGGGCTaGGTAGGTAGATCTGCTTGCCTCATACAAAGGTTCAGACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPHVCSAGIQGQTLG*VGRSACLIQRFRLF Trigger: GAACAGTCTGAACCTTTGTATGAGGCAAGCAGATCTACCTACTCAGCCCAATGTCTGTCCCTGTATTCCAGCACTGCATACATGAGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523086.5 |
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| CDS-3UTR CAA 90 bp | TTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGGGTGAGGAAGCGGAGAAGTaGTCGTCTCTAGACTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FYVCSHVFICSSLSIYSGEEAEK*SSLDSW Trigger: CCAAGAGTCTAGAGACGACAACTTCTCCGCTTCCTC...ACCCGAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518374.5 |
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| CDS-3UTR CAA 90 bp | TTTCTATGTATGCAGCCATGTATTCATATGCAGCAGCCTGAGCATTTACTCGGGGAACCGGAGGTGAAGTaGGTAGAGACCATTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLCMQPCIHMQQPEHLLGEPEVK*VETIQG Trigger: TCCCTGAATGGTCTCTACCAACTTCACCTCCGGTTC...CCCGAGTAAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518374.5 |
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| CDS-3UTR CAA 90 bp | CTTAAGCAGCCTTACAGAGCAGTCAGTCAACGTCTCTACAAAGCCTTTTTAGATGAGGAAGCGGAGAAGTaGTCGTCTCTAGACTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKQPYRAVSQRLYKAFLDEEAEK*SSLDSW Trigger: CCAAGAGTCTAGAGACGACAACTTCTCCGCTTCCTC...ATCTAAAAAGGCTTTGTAGAGACGTTGACTGACTGCTCTGTAAGGCTGCTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517406.1 |
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| CDS TCA 90 bp | TTTTCCTTATGTAGGAATGATTGGTTGAATTGTTGCTCCTTGGCTTaGTCTCCAGCCCTGCTGTATTCATTCCCCTTAGGCCTGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FSLCRNDWLNCCSLA*SPALLYSFPLGLAD Trigger: ATCAGCCAGGCCTAAGGGGAATGAATACAGCAGGGCTGGAGATCAAGCCAAGGAGCAACAATTCAACCAATCATTCCTACATAAGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000518768.1 ENST00000519963.5 |
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| CDS TCA 90 bp | CAAGGTAGGGTGTGTGGCATATATGACAATACGGATGTTCAGAAGTaGCAACTTAAATCACCGCTTGTTGTTCTCCCCTTACATCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: QGRVCGIYDNTDVQK*QLKSPLVVLPLHHP Trigger: CGGGTGATGTAAGGGGAGAACAACAAGCGGTGATTTAAGTTGTCACTTCTGAACATCCGTATTGTCATATATGCCACACACCCTACCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521509.5 |
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| CDS TCA 90 bp | AGCAGTTACAGTAATAGCGAGAGACGAATCTTCTTGTTGCTTAAATaGGAACATCACGATACCACAGGGTTCCCCATGGTGTGTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSYSNSERRIFLLLK*EHHDTTGFPMVCVL Trigger: GAGAACACACACCATGGGGAACCCTGTGGTATCGTGATGTTCTCATTTAAGCAACAAGAAGATTCGTCTCTCGCTATTACTGTAACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519057.5 ENST00000519963.5 |
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| CDS-3UTR CAA 90 bp | TCTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTCTGCTATTAATATACTaGCCTAGTAAGCAAGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGLNSVFSPCHQVSLLAALLLIY*PSKQAR Trigger: TCTAGCTTGCTTACTAGGCAAGTATATTAATAGCAG...AGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS CCA 90 bp | CTGGTCTTAACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTaGCTGCTATTAATATACTTGCCTAGTAAGCAAGCTAGAAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LVLTVFSPLAIRCHF*LLLIYLPSKQARRT Trigger: AGTTCTTCTAGCTTGCTTACTAGGCAAGTATATTAATAGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGTTAAGACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517736.5 ENST00000523086.5 |
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| CDS CCA 90 bp | TGTAAATTTGTAAATTGCTTGTTCCTGGATGGGCAGGTAGTGTGTTaGCATCATCCTGGCAGCATTGTTGTCTTTTACTCCTTGGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: CKFVNCLFLDGQVVC*HHPGSIVVFYSLAQ Trigger: TTGTGCCAAGGAGTAAAAGACAACAATGCTGCCAGGATGATGCCAACACACTACCTGCCCATCCAGGAACAAGCAATTTACAAATTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518768.1 |
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| CDS TCA 90 bp | CCAAAAGCTGAAAAATGTGTAGACCTCATGTTGGAAGTCAAGACATaGATCGAAATCTTGGCTTCTCCCTTTATCCTTAGTCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PKAEKCVDLMLEVKT*IEILASPFILSPGL Trigger: AAGCCCTGGACTAAGGATAAAGGGAGAAGCCAAGATTTCGATTCATGTCTTGACTTCCAACATGAGGTCTACACATTTTTCAGCTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000517406.1 ENST00000519963.5 |
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| CDS TCA 90 bp | ACAGACTTTTTCTCCATTAATTTGGAATCACCCAATCTTGGATTCTaGCTGCTTGGATGGTTGTGCCTAACTGTTCTGAGGCCTAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: TDFFSINLESPNLGF*LLGWLCLTVLRPNL Trigger: AAGGTTAGGCCTCAGAACAGTTAGGCACAACCATCCAAGCAGTCAGAATCCAAGATTGGGTGATTCCAAATTAATGGAGAAAAAGTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000521386.5 ENST00000521509.5 |
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| CDS TCA 90 bp | TGTCCAGAGTTTTTACTGGATTTTCCTTATGTAGGAATGATTGGTTaGATTGTTGCTCCTTGGCTTGATCTCCAGCCCTGCTGTATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPEFLLDFPYVGMIG*IVAPWLDLQPCCIH Trigger: ATGAATACAGCAGGGCTGGAGATCAAGCCAAGGAGCAACAATTCAACCAATCATTCCTACATAAGGAAAATCCAGTAAAAACTCTGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000518768.1 ENST00000519963.5 |
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| CDS TCA 90 bp | CCCAAGACAGCTAGGATGAATATAATTAGAGCCACAATTAGACAGTaGGGCAGGCCAACAGTTTCCAAATATTTAAGAGTACACGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PKTARMNIIRATIRQ*GRPTVSKYLRVHEP Trigger: AGGTTCGTGTACTCTTAAATATTTGGAAACTGTTGGCCTGCCTCACTGTCTAATTGTGGCTCTAATTATATTCATCCTAGCTGTCTTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000521386.5 ENST00000521509.5 |
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| CDS TCA 90 bp | AATCCAAATTTAATTCCTAAGCTTTGCCAGATTTCAACCAAAAGCTaGAAAATGTGTAGACCTCATGTTGGAAGTCAAGACATGAATCGA | + |
|
Preference number: 5 (lower is better) Translates to: NPNLIPKLCQISTKS*KMCRPHVGSQDMNR Trigger: TCGATTCATGTCTTGACTTCCAACATGAGGTCTACACATTTTTCAGCTTTTGGTTGAAATCTGGCAAAGCTTAGGAATTAAATTTGGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000517406.1 ENST00000521386.5 ENST00000521509.5 |
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| CDS GCA 72 bp | CGGGGCGTAGGTCTCGAGGCAACTAGGCCGGCGACGTaGCAGAGTTACAGGCTCTGGAATCTGGGGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGVGLEATRPAT*QSYRLWNLGVG Trigger: CCCCACCCCCAGATTCCAGAGCCTGTAACTCTGGCACGTCGCCGGCCTAGTTGCCTCGAGACCTACGCCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS CCA 72 bp | GTCGGGGAGGTTCCCTGGTTACACGGTCCGGATTCCTaGGCCACTGCGGTCGCTGCTGCCCGCGGTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VGEVPWLHGPDS*ATAVAAARGVV Trigger: AACAACACCGCGGGCAGCAGCGACCGCAGTGGCCCAGGAATCCGGACCGTGTAACCAGGGAACCTCCCCGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS CCA 72 bp | GGTGGGGGAGGTGCCCGAGTTAAGGGTGTGGAGAGTTaGGATTTCGCCGCCGTGAGGCCGGCATCGGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: GGGGARVKGVES*DFAAVRPASVT Trigger: AGTCACCGATGCCGGCCTCACGGCGGCGAAATCCCAACTCTCCACACCCTTAACTCGGGCACCTCCCCCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517736.5 |
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| CDS GCA 72 bp | CTGGGTCTCTTAAACTCCGCCACCCTTTCCCTCCCCTaGGTCTCGCCAGGGACCTCCTCACTCCTTAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGLLNSATLSLP*VSPGTSSLLSP Trigger: TGGACTAAGGAGTGAGGAGGTCCCTGGCGAGACGCAGGGGAGGGAAAGGGTGGCGGAGTTTAAGAGACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521509.5 |
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| CDS CAA 72 bp | CTCCCGGACGCCGCCATCGCCGAGGAAGCGGAGAAGTaGTCGTCTCTACAACCAAGACGCAACTTTACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LPDAAIAEEAEK*SSLQPRRNFTS Trigger: CGAGGTAAAGTTGCGTCTTGGTTGTAGAGACGACAACTTCTCCGCTTCCTCGGCGATGGCGGCGTCCGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357849.9 |
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| CDS CAA 90 bp | GCCATACCGCTCCCGGACGCCGCCATCGCCGAGGAAGCGGAGAAGTaGTCGTCTCTACAACCAAGACGCAACTTTACCTCGCTAGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AIPLPDAAIAEEAEK*SSLQPRRNFTSLGF Trigger: GAAACCTAGCGAGGTAAAGTTGCGTCTTGGTTGTAGAGACGACAACTTCTCCGCTTCCTCGGCGATGGCGGCGTCCGGGAGCGGTATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357849.9 |
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| CDS GCA 72 bp | GGAGTGAAAGCCCCAGCGGAGGGCTTAGGCTCTACTTaGAGATCCAAGACGCATATTCTGTCCCCCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GVKAPAEGLGST*RSKTHILSPSQ Trigger: CTGGGAGGGGGACAGAATATGCGTCTTGGATCTGCAAGTAGAGCCTAAGCCCTCCGCTGGGGCTTTCACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521509.5 |
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| CDS CCA 72 bp | CCAAGACGCAACTTTACCTCGCTAGGTTTCCGGGTGTaGGCCTTGACCCTCCGCACCACGGGAACAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: PRRNFTSLGFRV*ALTLRTTGTNS Trigger: AGAGTTTGTTCCCGTGGTGCGGAGGGTCAAGGCCCACACCCGGAAACCTAGCGAGGTAAAGTTGCGTCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357849.9 |
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| CDS CAA 72 bp | TCCCAGCACTTTGGAAGGCGAAGGCGGGAGGATCGCTaGAAGGCAGAAGCTCGAGATCAGCCTGAGCAACAC | + |
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Preference number: 6 (lower is better) Translates to: SQHFGRRRREDR*KAEARDQPEQH Trigger: GTGTTGCTCAGGCTGATCTCGAGCTTCTGCCTTCAAGCGATCCTCCCGCCTTCGCCTTCCAAAGTGCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521386.5 ENST00000521509.5 ENST00000523890.5 |
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| CDS CAA 72 bp | GGGAGTGAAAGCCCCAGCGGAGGGCTTAGGCTCTACTaGCAGATCCAAGACGCATATTCTGTCCCCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GSESPSGGLRLY*QIQDAYSVPLP Trigger: TGGGAGGGGGACAGAATATGCGTCTTGGATCTGCAAGTAGAGCCTAAGCCCTCCGCTGGGGCTTTCACTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521509.5 |
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| CDS CAA 72 bp | CGCAACTTTACCTCGCTAGGTTTCCGGGTGTGGGCCTaGACCCTCCGCACCACGGGAACAAACTCTTACCTA | + |
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Preference number: 6 (lower is better) Translates to: RNFTSLGFRVWA*TLRTTGTNSYL Trigger: TAGGTAAGAGTTTGTTCCCGTGGTGCGGAGGGTCAAGGCCCACACCCGGAAACCTAGCGAGGTAAAGTTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357849.9 |
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| CDS CAA 90 bp | CAACCAAGACGCAACTTTACCTCGCTAGGTTTCCGGGTGTGGGCCTaGACCCTCCGCACCACGGGAACAAACTCTTACCTAGACTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QPRRNFTSLGFRVWA*TLRTTGTNSYLDSW Trigger: CCAAGAGTCTAGGTAAGAGTTTGTTCCCGTGGTGCGGAGGGTCAAGGCCCACACCCGGAAACCTAGCGAGGTAAAGTTGCGTCTTGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357849.9 |
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| CDS TCA 72 bp | TCCAGCCCTGCTGTATTCATTCCCCTTAGGCCTGGCTaGTGTCACATGGCGCAAAGGCCCAACCCTCAAATC | + |
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Preference number: 6 (lower is better) Translates to: SSPAVFIPLRPG*CHMAQRPNPQI Trigger: GATTTGAGGGTTGGGCCTTTGCGCCATGTGACATCAGCCAGGCCTAAGGGGAATGAATACAGCAGGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518768.1 ENST00000519963.5 |
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| CDS CCA 72 bp | CTGTATTCATTCCCCTTAGGCCTGGCTGATGTCACATaGCGCAAAGGCCCAACCCTCAAATCACATGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LYSFPLGLADVT*RKGPTLKSHGW Trigger: CCAACCATGTGATTTGAGGGTTGGGCCTTTGCGCCATGTGACATCAGCCAGGCCTAAGGGGAATGAATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518768.1 ENST00000519963.5 |
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| CDS CCA 72 bp | ACATGGCGCAAAGGCCCAACCCTCAAATCACATGGTTaGTTTTTCTGGCATGACCAGCTCCCGTTTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: TWRKGPTLKSHG*FFWHDQLPFLS Trigger: AGACAAAAACGGGAGCTGGTCATGCCAGAAAAACCAACCATGTGATTTGAGGGTTGGGCCTTTGCGCCATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000518768.1 ENST00000519963.5 |
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| CDS TCA 72 bp | GTATGCAGTGCTGGAATACAGGGACAGACATTGGGCTaGGTAGGTAGATCTGCTTGCCTCATACAAAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VCSAGIQGQTLG*VGRSACLIQRF Trigger: GAACCTTTGTATGAGGCAAGCAGATCTACCTACTCAGCCCAATGTCTGTCCCTGTATTCCAGCACTGCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523086.5 |
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| CDS TCA 72 bp | TCTGAAAACAGCTGCAATCCCCAGTTTGGGATTAGTTaGAGACCCAAACAAGGTGCATGTCGACACTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SENSCNPQFGIS*RPKQGACRHWA Trigger: AGCCCAGTGTCGACATGCACCTTGTTTGGGTCTTCAACTAATCCCAAACTGGGGATTGCAGCTGTTTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000521386.5 ENST00000521509.5 |
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| CDS CAA 72 bp | CGGATGTTCAGAAGTGACAACTTAAATCACCGCTTGTaGTTCTCCCCTTACATCACCCGGGGGCAAATGGAT | + |
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Preference number: 6 (lower is better) Translates to: RMFRSDNLNHRL*FSPYITRGQMD Trigger: ATCCATTTGCCCCCGGGTGATGTAAGGGGAGAACAACAAGCGGTGATTTAAGTTGTCACTTCTGAACATCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521509.5 |
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| CDS TCA 72 bp | TGTAGGAATGATTGGTTGAATTGTTGCTCCTTGGCTTaGTCTCCAGCCCTGCTGTATTCATTCCCCTTAGGC | + |
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Preference number: 6 (lower is better) Translates to: CRNDWLNCCSLA*SPALLYSFPLG Trigger: GCCTAAGGGGAATGAATACAGCAGGGCTGGAGATCAAGCCAAGGAGCAACAATTCAACCAATCATTCCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518768.1 ENST00000519963.5 |
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| CDS CCA 72 bp | GTAAATTGCTTGTTCCTGGATGGGCAGGTAGTGTGTTaGCATCATCCTGGCAGCATTGTTGTCTTTTACTCC | + |
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Preference number: 6 (lower is better) Translates to: VNCLFLDGQVVC*HHPGSIVVFYS Trigger: GGAGTAAAAGACAACAATGCTGCCAGGATGATGCCAACACACTACCTGCCCATCCAGGAACAAGCAATTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518768.1 |
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| CDS CAA 72 bp | ATACGGATGTTCAGAAGTGACAACTTAAATCACCGCTaGTTGTTCTCCCCTTACATCACCCGGGGGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: IRMFRSDNLNHR*LFSPYITRGQM Trigger: CATTTGCCCCCGGGTGATGTAAGGGGAGAACAACAAGCGGTGATTTAAGTTGTCACTTCTGAACATCCGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521509.5 |
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| CDS TCA 72 bp | GTGGGTTCTGACATTCATCTGCTAAGGTCTGAATCTTaGCATTGCCATTCCCTAGCTGTGGTATTGGGACAA | + |
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Preference number: 6 (lower is better) Translates to: VGSDIHLLRSES*HCHSLAVVLGQ Trigger: TTGTCCCAATACCACAGCTAGGGAATGGCAATGTCAAGATTCAGACCTTAGCAGATGAATGTCAGAACCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000521386.5 ENST00000521509.5 |
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| CDS CAA 72 bp | TGTAAATTGCTTGTTCCTGGATGGGCAGGTAGTGTGTaGGCATCATCCTGGCAGCATTGTTGTCTTTTACTC | + |
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Preference number: 6 (lower is better) Translates to: CKLLVPGWAGSV*ASSWQHCCLLL Trigger: GAGTAAAAGACAACAATGCTGCCAGGATGATGCCAACACACTACCTGCCCATCCAGGAACAAGCAATTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518768.1 |
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| CDS CAA 90 bp | TCTCCCCTTGCCATCAGGTGTCACTTCTGGCTGCTATTAATATACTaGCCTAGTAAGCAAGCTAGAAGAACTCAACGTATTCACCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SPLAIRCHFWLLLIY*PSKQARRTQRIHPV Trigger: TACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAGGCAAGTATATTAATAGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517736.5 ENST00000523086.5 |
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| CDS CCA 72 bp | ACAGTGTTTTCTCCCCTTGCCATCAGGTGTCACTTCTaGCTGCTATTAATATACTTGCCTAGTAAGCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: TVFSPLAIRCHF*LLLIYLPSKQA Trigger: AGCTTGCTTACTAGGCAAGTATATTAATAGCAGCCAGAAGTGACACCTGATGGCAAGGGGAGAAAACACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517736.5 ENST00000523086.5 |
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| CDS TCA 72 bp | TTCTCCATTAATTTGGAATCACCCAATCTTGGATTCTaGCTGCTTGGATGGTTGTGCCTAACTGTTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSINLESPNLGF*LLGWLCLTVLR Trigger: CCTCAGAACAGTTAGGCACAACCATCCAAGCAGTCAGAATCCAAGATTGGGTGATTCCAAATTAATGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000521386.5 ENST00000521509.5 |
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| CDS GCA 72 bp | GCAGTTACAGTAATAGCGAGAGACGAATCTTCTTGTTaGTTAAATGAGAACATCACGATACCACAGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: AVTVIARDESSC*LNENITIPQGS Trigger: GGAACCCTGTGGTATCGTGATGTTCTCATTTAAGCAACAAGAAGATTCGTCTCTCGCTATTACTGTAACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519057.5 ENST00000519963.5 |
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| CDS TCA 72 bp | GTGTGTGGCATATATGACAATACGGATGTTCAGAAGTaGCAACTTAAATCACCGCTTGTTGTTCTCCCCTTA | + |
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Preference number: 6 (lower is better) Translates to: VCGIYDNTDVQK*QLKSPLVVLPL Trigger: TAAGGGGAGAACAACAAGCGGTGATTTAAGTTGTCACTTCTGAACATCCGTATTGTCATATATGCCACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521509.5 |
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| CDS CCA 72 bp | ATCCAACTTAACTGTGGTAGTTTTCCTGGTGTTCTTTaGCTAAGCCTGAGTGTCCAGAGTTTTTACTGGATT | + |
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Preference number: 6 (lower is better) Translates to: IQLNCGSFPGVL*LSLSVQSFYWI Trigger: AATCCAGTAAAAACTCTGGACACTCAGGCTTAGCCAAAGAACACCAGGAAAACTACCACAGTTAAGTTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000518768.1 ENST00000519963.5 |
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| CDS TCA 72 bp | GAAAAATGTGTAGACCTCATGTTGGAAGTCAAGACATaGATCGAAATCTTGGCTTCTCCCTTTACTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: EKCVDLMLEVKT*IEILASPFTGE Trigger: TTCTCCAGTAAAGGGAGAAGCCAAGATTTCGATTCATGTCTTGACTTCCAACATGAGGTCTACACATTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000521386.5 ENST00000521509.5 |
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| CDS CAA 90 bp | GCATTATTAACCTGTCTCTTAACCCTACTCTCAAAGAACAGAGTGTaGAAGGGTGGGCTTCCCTGTTATATCAGCCTTAAATTAAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: ALLTCLLTLLSKNRV*KGGLPCYISLKLKS Trigger: ACTTTTTAATTTAAGGCTGATATAACAGGGAAGCCCACCCTTCAACACTCTGTTCTTTGAGAGTAGGGTTAAGAGACAGGTTAATAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000521386.5 ENST00000521509.5 |
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| CDS TCA 72 bp | GAAAAATGTGTAGACCTCATGTTGGAAGTCAAGACATaGATCGAAATCTTGGCTTCTCCCTTTATCCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: EKCVDLMLEVKT*IEILASPFILS Trigger: ACTAAGGATAAAGGGAGAAGCCAAGATTTCGATTCATGTCTTGACTTCCAACATGAGGTCTACACATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517406.1 ENST00000519963.5 |
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| CDS TCA 72 bp | TTAATTCCTAAGCTTTGCCAGATTTCAACCAAAAGCTaGAAAATGTGTAGACCTCATGTTGGAAGTCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LIPKLCQISTKS*KMCRPHVGSQD Trigger: GTCTTGACTTCCAACATGAGGTCTACACATTTTTCAGCTTTTGGTTGAAATCTGGCAAAGCTTAGGAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000517406.1 ENST00000521386.5 ENST00000521509.5 |
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| CDS TCA 72 bp | GCTAGGATGAATATAATTAGAGCCACAATTAGACAGTaGGGCAGGCCAACAGTTTCCAAATATTTAAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: ARMNIIRATIRQ*GRPTVSKYLRV Trigger: TACTCTTAAATATTTGGAAACTGTTGGCCTGCCTCACTGTCTAATTGTGGCTCTAATTATATTCATCCTAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000521386.5 ENST00000521509.5 |
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