RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COPS4 (Homo sapiens)

Ensembl gene IDs: ENSG00000138663

Ensembl transcript IDs: ENST00000264389.7, ENST00000503682.5, ENST00000504274.1, ENST00000506443.5, ENST00000507376.1, ENST00000509093.5, ENST00000509317.5, ENST00000510801.5, ENST00000511653.1, ENST00000511708.1, ENST00000511891.5

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTaGAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTGTGCTGT +
Preference number: 1 (lower is better)
Translates to: LICTTWKKMSCAQKF*KDSLSHLGFHGLCC
Trigger: ACAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR GCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTaGACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCA +
Preference number: 1 (lower is better)
Translates to: GDSETDLHNMEKDVM*TEVLQGFTEPSGLP
Trigger: TGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR GCA 90 bp CTATCAGGCAAGTTAGGAAGATGTGTGCAAAAATCAGTCAGCAACTaGCGCGAGATCACGAGACTGACATTCTCATTTACCATTGCTTCC +
Preference number: 1 (lower is better)
Translates to: LSGKLGRCVQKSVSN*REITRLTFSFTIAS
Trigger: GGAAGCAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACACATCTTCCTAACTTGCCTGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
3UTR CCA 90 bp CATGATGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATaGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTG +
Preference number: 1 (lower is better)
Translates to: HDANALEIVKLICTT*KKMSCAQKFCKDSL
Trigger: CAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCATCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR CAA 90 bp CAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTaGTGCTGTCCATTCTGGTGCTGTTTGACTAATTTTCTCCAAAAG +
Preference number: 2 (lower is better)
Translates to: QKFCKDSLSHLGFHG*CCPFWCCLTNFLQK
Trigger: CTTTTGGAGAAAATTAGTCAAACAGCACCAGAATGGACAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR-3UTR GCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATGGCTTCCATGGCTTGTaGTGTCCATTCTGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDGFHGL*CPFWCC
Trigger: ACAGCACCAGAATGGACAGCACAAGCCATGGAAGCC...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR-3UTR TCA 90 bp TGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGCATTCTGGTGCTGTTTaGCTAATTTTCTCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: WKKMSCAQKFCKDSLSHLHSGAV*LIFSKR
Trigger: CCTTTTGGAGAAAATTAGTCAAACAGCACCAGAATG...CAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR-3UTR TCA 90 bp TTCTCATATATAGATGCAAGATGCTGTCTTATGGAAGCAACCTGCTCCTCAAATGCGAGATCACGAGACTaGCATTCTCATTTACCATTG +
Preference number: 2 (lower is better)
Translates to: FSYIDARCCLMEATCSSNARSRD*HSHLPL
Trigger: CAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGC...ATTTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTGCATCTATATATGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507376.1
3UTR-3UTR GCA 90 bp TGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGATAGTGAAACTGATCTaGACAACATGGAAAAAGATG +
Preference number: 2 (lower is better)
Translates to: CTTWKKMSCAQKFCKDSLIVKLI*TTWKKM
Trigger: CATCTTTTTCCATGTTGTGCAGATCAGTTTCACTAT...CAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR-3UTR GCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATTGCTGTCCATTCTGGTaGTGTTTGACTAATTTTCTC +
Preference number: 2 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDCCPFW*CLTNFL
Trigger: GAGAAAATTAGTCAAACAGCACCAGAATGGACAGCA...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR-3UTR CCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGCTGATCTGCACAACATaGAAAAAGATGTCATGTGCA +
Preference number: 2 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMLICTT*KKMSCA
Trigger: TGCACATGACATCTTTTTCCATGTTGTGCAGATCAG...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
3UTR-3UTR CCA 90 bp GATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTTTGTGCTGTCCATTCTaGTGCTGTTTGACTAATTTT +
Preference number: 2 (lower is better)
Translates to: DSETDLHNMEKDVMCTEVLCCPF*CCLTNF
Trigger: AAAATTAGTCAAACAGCACCAGAATGGACAGCACAA...AACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR-3UTR TCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAACATTCTGGTGCTGTTTaGCTAATTTTCTCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKHSGAV*LIFSKR
Trigger: CCTTTTGGAGAAAATTAGTCAAACAGCACCAGAATG...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR-3UTR GCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATATAGTGAAACTGATCTaGACAACATGGAAAAAGATG +
Preference number: 2 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDIVKLI*TTWKKM
Trigger: CATCTTTTTCCATGTTGTGCAGATCAGTTTCACTAT...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
3UTR TCA 72 bp AGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTaGGCCATCTGGGCTTCCATGGCTTGTGCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: RCHVHRSSARIH*AIWASMACAVH
Trigger: ATGGACAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR-3UTR CAA 90 bp TCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACCTGGGCTTCCATGGCTaGTGCTGTCCATTCTGGTGC +
Preference number: 3 (lower is better)
Translates to: SAQHGKRCHVHRSSARIHLGFHG*CCPFWC
Trigger: GCACCAGAATGGACAGCACAAGCCATGGAAGCCCAG...GTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR GCA 72 bp AAGTTAGGAAGATGTGTGCAAAAATCAGTCAGCAACTaGCGCGAGATCACGAGACTGACATTCTCATTTACC +
Preference number: 3 (lower is better)
Translates to: KLGRCVQKSVSN*REITRLTFSFT
Trigger: GGTAAATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACACATCTTCCTAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
3UTR GCA 72 bp GAAACTGATCTGCACAACATGGAAAAAGATGTCATGTaGACAGAAGTTCTGCAAGGATTCACTGAGCCATCT +
Preference number: 3 (lower is better)
Translates to: ETDLHNMEKDVM*TEVLQGFTEPS
Trigger: AGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
3UTR GCA 72 bp CATGATGCAAATGCTTTGGAGATAGTGAAACTGATCTaGACAACATGGAAAAAGATGTCATGTGCACAGAAG +
Preference number: 3 (lower is better)
Translates to: HDANALEIVKLI*TTWKKMSCAQK
Trigger: CTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCATCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
3UTR CCA 72 bp AATGCTTTGGAGATAGTGAAACTGATCTGCACAACATaGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAG +
Preference number: 3 (lower is better)
Translates to: NALEIVKLICTT*KKMSCAQKFCK
Trigger: CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp TCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCCCAGAGCGTCGGGTGTaGGAGCCTGGGCTAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SCAQKFCKDSLSHLGFHGPERRV*EPGLAP
Trigger: CGGAGCTAGCCCAGGCTCCCACACCCGACGCTCTGG...GCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CCA 90 bp ATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTCTCCCAGCTCAGCGGTaGATGCGGGGGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: MCTEVLQGFTEPSGLPWLLPAQR*MRGPLA
Trigger: TGCCAGAGGCCCCCGCATCCACCGCTGAGCTGGGAG...AAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR TCA 90 bp ATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATCTCCGCCCCCAGGGTTaGGTGATGCGGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: MSCAQKFCKDSLSHLGFHLRPQG*VMRSST
Trigger: AGTGGAGCTCCGCATCACTCAACCCTGGGGGCGGAG...ATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CCA 90 bp ATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTGTAATCCCAGCACTTTaGGCAGCCGAGGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: MCTEVLQGFTEPSGLPWLVIPAL*AAEAGG
Trigger: TCCGCCCGCCTCGGCTGCCCAAAGTGCTGGGATTAC...AAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGTCGGGTGTGGGAGCCTaGGCTAGCTCCGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQSGVGA*ASSAPR
Trigger: CCTGGGGGCGGAGCTAGCCCAGGCTCCCACACCCGA...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR TCA 90 bp GATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCAAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTC +
Preference number: 4 (lower is better)
Translates to: DVMCTEVLQGFTEPSGLPSRSNS*AGPNPV
Trigger: GACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCT...TGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp ACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTGTGCTGGCTTTTTCCAGGATCTaGCGATACTTGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TEVLQGFTEPSGLPWLVLAFSRI*RYLPAR
Trigger: TCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGC...CAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTGTGGTCCTCCAGAGTaGAGCCAGAGGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: KKMSCAQKFCKDSLSHLGCGPPE*SQREPE
Trigger: CTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCACA...GCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR TCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAATCCACTCCTCAGGTCTaGGGCCTGCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTESTPQV*GLPRSL
Trigger: GAGAGACCTGGGCAGGCCTCAGACCTGAGGAGTGGA...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR GCA 90 bp GATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCAAAATCAGTCAGCAACTaGCGCGAGATCACGAGACTG +
Preference number: 4 (lower is better)
Translates to: DVMCTEVLQGFTEPSGLPKSVSN*REITRL
Trigger: CAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTT...TGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATCTCCCAGCTCAGCGGTaGATGCGGGGGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDLPAQR*MRGPLA
Trigger: TGCCAGAGGCCCCCGCATCCACCGCTGAGCTGGGAG...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264389.7
ENST00000509093.5
CDS-3UTR CCA 90 bp GATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCAAGCCTCTGCCTGGACTaGATCATCATCCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: DVMCTEVLQGFTEPSGLPSLCLD*IIILQI
Trigger: TATCTGGAGGATGATGATCCAGTCCAGGCAGAGGCT...TGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp ATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGTAGTTGCTTTTTGGTaGGGCATCAGCATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MSCAQKFCKDSLSHLGFHVVAFW*GISMAA
Trigger: TGCTGCCATGCTGATGCCTCACCAAAAAGCAACTAC...ATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GATCTTTTCCAAGGTGAAGTGATAGATTTCTTTGGCTGTGCTATCAGGCAAGTTATCCTGTCGCACGGCTaGCGCCATCTTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: DLFQGEVIDFFGCAIRQVILSHG*RHLSPS
Trigger: GCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGAT...AACTTGCCTGATAGCACAGCCAAAGAAATCTATCACTTCACCTTGGAAAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR GCA 90 bp TCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCCACCAACACTTGGGCTaGATTTCTCCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SCAQKFCKDSLSHLGFHGHQHLG*ISPIFF
Trigger: GAAGAAGATTGGAGAAATGCAGCCCAAGTGTTGGTG...GCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGAGCATCCGAGAACGCTaGTGCCCTGCTGATGCTAAG +
Preference number: 4 (lower is better)
Translates to: WKKMSCAQKFCKDSLSHLSIRER*CPADAK
Trigger: CTTAGCATCAGCAGGGCAGCAGCGTTCTCGGATGCT...CAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTCAAAGTGATTGGATCTaGTTATCCCACGTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: MCTEVLQGFTEPSGLPWLQSDWI*LSHVGR
Trigger: CCTGCCAACGTGGGATAAGCAGATCCAATCACTTTG...AAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTC +
Preference number: 4 (lower is better)
Translates to: CTTWKKMSCAQKFCKDSLSRSNS*AGPNPV
Trigger: GACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCT...CAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCCACTTGGAAACAAAGTaGTTGGATCTGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: SCAQKFCKDSLSHLGFHGHLETK*LDLLIP
Trigger: TGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTG...GCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATCCTGTCGCACGGCTaGCGCCATCTTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVILSHG*RHLSPS
Trigger: GCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGAT...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
CDS-3UTR GCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAATCCTGTCGCACGGCTaGCGCCATCTTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSILSHG*RHLSPS
Trigger: GCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGAT...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
CDS-3UTR GCA 90 bp TGTGCAAAAATCAGTCAGCAACTGCCGCGAGATCACGAGACTGACATTCTCATTAAATCAGTCAGCAACTaGCGCGAGATCACGAGACTG +
Preference number: 4 (lower is better)
Translates to: CAKISQQLPRDHETDILIKSVSN*REITRL
Trigger: CAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTT...AATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR GCA 90 bp ACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTGTGCTGGCTAAGATCGTACAGTaGAAAGCATGTTTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: TEVLQGFTEPSGLPWLVLAKIVQ*KACFKA
Trigger: GGCCTTAAAACATGCTTTGCACTGTACGATCTTAGC...CAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGAAGCATCCGAGAACGCTaGTGCCCTGCTGATGCTAAG +
Preference number: 4 (lower is better)
Translates to: TDLHNMEKDVMCTEVLQGSIRER*CPADAK
Trigger: CTTAGCATCAGCAGGGCAGCAGCGTTCTCGGATGCT...TCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATCAAAGTGATTGGATCTaGTTATCCCACGTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: MSCAQKFCKDSLSHLGFHQSDWI*LSHVGR
Trigger: CCTGCCAACGTGGGATAAGCAGATCCAATCACTTTG...ATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAGCCGGGCGTAGGTGGTaGACCCCTGTAGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKAGRRW*TPVVPA
Trigger: TGCTGGGACTACAGGGGTGCACCACCTACGCCCGGC...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CCA 90 bp AAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCAGCCTCTGCCTGGACTaGATCATCATCCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: KKMSCAQKFCKDSLSHLGSLCLD*IIILQI
Trigger: TATCTGGAGGATGATGATCCAGTCCAGGCAGAGGCT...GCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAAGAGTAGCGTCTGTGTaGGCCAGAGCGTCGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSRVASV*ARASGV
Trigger: CACACCCGACGCTCTGGCCCACACAGACGCTACTCT...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CCA 90 bp TGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGCTGCTTATCCCACGTTaGCAGGGCTTCTCGTGCTTA +
Preference number: 4 (lower is better)
Translates to: WKKMSCAQKFCKDSLSHLLLIPR*QGFSCL
Trigger: TAAGCACGAGAAGCCCTGCCAACGTGGGATAAGCAG...CAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR TCA 90 bp GATTTCTTTGGCTGTGCTATCAGGCAAGTTAGGAAGATGTGTGCAAAAATCAGTAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTC +
Preference number: 4 (lower is better)
Translates to: DFFGCAIRQVRKMCAKISSRSNS*AGPNPV
Trigger: GACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCT...ACTGATTTTTGCACACATCTTCCTAACTTGCCTGATAGCACAGCCAAAGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR TCA 90 bp TTGGCTGTGCTATCAGGCAAGTTAGGAAGATGTGTGCAAAAATCAGTCAGCAACCCAGCCAGATCTTTATaGGAGCCGCTCGAATTCATG +
Preference number: 4 (lower is better)
Translates to: LAVLSGKLGRCVQKSVSNPARSL*EPLEFM
Trigger: CATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGG...GTTGCTGACTGATTTTTGCACACATCTTCCTAACTTGCCTGATAGCACAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR TCA 90 bp TGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGCCAGCCAGATCTTTATaGGAGCCGCTCGAATTCATG +
Preference number: 4 (lower is better)
Translates to: WKKMSCAQKFCKDSLSHLPARSL*EPLEFM
Trigger: CATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGG...CAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp ACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTGTGCTGGGATCTTTTCCAAGGTaGAGTGATAGATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TEVLQGFTEPSGLPWLVLGSFPR*SDRFLW
Trigger: CCAAAGAAATCTATCACTTCACCTTGGAAAAGATCC...CAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAAGCATCCGAGAACGCTaGTGCCCTGCTGATGCTAAG +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTESIRER*CPADAK
Trigger: CTTAGCATCAGCAGGGCAGCAGCGTTCTCGGATGCT...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATGGCTTCCATGGCTTGTaGTGTCCATTCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDGFHGL*CPFWCC
Trigger: ACAGCACCAGAATGGACAGCACAAGCCATGGAAGCC...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATCTCAGGTCTGAGGCCTaGCCAGGTCTCTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDLRSEA*PGLSYR
Trigger: CCTGTAGGAGAGACCTGGGCAGGCCTCAGACCTGAG...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR TCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTC +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSSRSNS*AGPNPV
Trigger: GACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCT...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACCCAGCCAGATCTTTATaGGAGCCGCTCGAATTCATG +
Preference number: 4 (lower is better)
Translates to: SAQHGKRCHVHRSSARIHPARSL*EPLEFM
Trigger: CATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGG...GTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp ACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGAGCTTTTTCCAGGATCTaGCGATACTTGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TDLHNMEKDVMCTEVLQGAFSRI*RYLPAR
Trigger: TCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGC...TCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TGTGCAAAAATCAGTCAGCAACTGCCGCGAGATCACGAGACTGACATTCTCATTGCGAGATCACGAGACTaGCATTCTCATTTACCATTG +
Preference number: 4 (lower is better)
Translates to: CAKISQQLPRDHETDILIARSRD*HSHLPL
Trigger: CAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGC...AATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR TCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATGTAGTTGCTTTTTGGTaGGGCATCAGCATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDVVAFW*GISMAA
Trigger: TGCTGCCATGCTGATGCCTCACCAAAAAGCAACTAC...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGTCTGCAAGGATTCACTaGGCCATCTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKSARIH*AIWASM
Trigger: CATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGA...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGTCTGCAAGGATTCACTaGGCCATCTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQSARIH*AIWASM
Trigger: CATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGA...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAATCCTGTCGCACGGCTaGCGCCATCTTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKILSHG*RHLSPS
Trigger: GCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGAT...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
CDS-3UTR GCA 90 bp GATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCACTTATGGAAGCAACCTaGTCCTCAAATGAAATGACT +
Preference number: 4 (lower is better)
Translates to: DVMCTEVLQGFTEPSGLPLMEAT*SSNEMT
Trigger: AGTCATTTCATTTGAGGAGCAGGTTGCTTCCATAAG...TGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TGTGCAAAAATCAGTCAGCAACTGCCGCGAGATCACGAGACTGACATTCTCATTCACCAACACTTGGGCTaGATTTCTCCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CAKISQQLPRDHETDILIHQHLG*ISPIFF
Trigger: GAAGAAGATTGGAGAAATGCAGCCCAAGTGTTGGTG...AATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR GCA 90 bp AAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCCACCAACACTTGGGCTaGATTTCTCCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KKMSCAQKFCKDSLSHLGHQHLG*ISPIFF
Trigger: GAAGAAGATTGGAGAAATGCAGCCCAAGTGTTGGTG...GCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTATTCTGAAGCAACGATaGTCGATTTATGTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: MCTEVLQGFTEPSGLPWLILKQR*SIYVSL
Trigger: GAGGCTTACATAAATCGAGCATCGTTGCTTCAGAAT...AAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGGGCTTCCATGGCTTGTaGTGTCCATTCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQGFHGL*CPFWCC
Trigger: ACAGCACCAGAATGGACAGCACAAGCCATGGAAGCC...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGCTCGAATTCATGAGCTaGGCCAAATCCTGTCGCACG +
Preference number: 4 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKLEFMS*AKSCRT
Trigger: CGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAG...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp TCTTTCTCATATATAGATGCAAGATGCTGTCTTATGGAAGCAACCTGCTCCTCACTCGAATTCATGAGCTaGGCCAAATCCTGTCGCACG +
Preference number: 4 (lower is better)
Translates to: SFSYIDARCCLMEATCSSLEFMS*AKSCRT
Trigger: CGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAG...TGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTGCATCTATATATGAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR CCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAACTGCTTATCCCACGTTaGCAGGGCTTCTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTELLIPR*QGFSCF
Trigger: GAAACACGAGAAGCCCTGCCAACGTGGGATAAGCAG...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264389.7
ENST00000503682.5
CDS-3UTR CCA 90 bp ACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTGTGCTGTTGTGCTGTCCATTCTaGTGCTGTTTGACTAATTTT +
Preference number: 4 (lower is better)
Translates to: TEVLQGFTEPSGLPWLVLLCCPF*CCLTNF
Trigger: AAAATTAGTCAAACAGCACCAGAATGGACAGCACAA...CAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGCTCTGTCCAAGATGCTaGAACCCCTATCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKLCPRC*NPYHPS
Trigger: GCTGGGATGATAGGGGTTCCAGCATCTTGGACAGAG...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503682.5
CDS-3UTR CCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATCTGCTTATCCCACGTTaGCAGGGCTTCTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDLLIPR*QGFSCC
Trigger: GCAGCACGAGAAGCCCTGCCAACGTGGGATAAGCAG...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR TCA 90 bp ACGGAATCCAGCATAAAAGGGATTGAAATGTATAAGGTCATGATGCAAATGCTTAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTC +
Preference number: 4 (lower is better)
Translates to: TESSIKGIEMYKVMMQMLSRSNS*AGPNPV
Trigger: GACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCT...AAGCATTTGCATCATGACCTTATACATTTCAATCCCTTTTATGCTGGATTCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TGTGTGCAAAAATCAGTCAGCAACTGCCGCGAGATCACGAGACTGACATTCTCAGGATCTTTTCCAAGGTaGAGTGATAGATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CVQKSVSNCREITRLTFSGSFPR*SDRFLW
Trigger: CCAAAGAAATCTATCACTTCACCTTGGAAAAGATCC...TGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR TCA 90 bp TTGGCTGTGCTATCAGGCAAGTTAGGAAGATGTGTGCAAAAATCAGTCAGCAACAACCTGCTCCTCAAATaGAATGACTCTAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LAVLSGKLGRCVQKSVSNNLLLK*NDSRLD
Trigger: ATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTT...GTTGCTGACTGATTTTTGCACACATCTTCCTAACTTGCCTGATAGCACAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR TCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATCTGCAAGGATTCACTaGGCCATCTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSSARIH*AIWASM
Trigger: CATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGA...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp GATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTTCTGCAAGGATTCACTaGGCCATCTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: DSETDLHNMEKDVMCTEVSARIH*AIWASM
Trigger: CATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGA...AACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATATATAGATGCAAGATaGTGTCTTATGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: DVMCTEVLQGFTEPSGLPYIDAR*CLMEAT
Trigger: GGTTGCTTCCATAAGACAGCATCTTGCATCTATATA...TGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGAGCATCCGAGAACGCTaGTGCCCTGCTGATGCTAAG +
Preference number: 4 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMSIRER*CPADAK
Trigger: CTTAGCATCAGCAGGGCAGCAGCGTTCTCGGATGCT...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCGGCTTCCATGGCTTGTaGTGTCCATTCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVGFHGL*CPFWCC
Trigger: ACAGCACCAGAATGGACAGCACAAGCCATGGAAGCC...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCACAGCTCTGTCCAAGATaGTGGAACCCCTATCATCCC +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSQLCPR*WNPYHP
Trigger: GGGATGATAGGGGTTCCAGCATCTTGGACAGAGCTG...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503682.5
CDS-3UTR GCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAAGAGGGAACCTGAGATaGTACAGAGTAGCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTERGNLR*YRVASV
Trigger: CACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCT...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCACTCGAATTCATGAGCTaGGCCAAATCCTGTCGCACG +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSLEFMS*AKSCRT
Trigger: CGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAG...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp TGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGCAAGATGCTGTCTTATaGAAGCAACCTGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: WKKMSCAQKFCKDSLSHLQDAVL*KQPAPQ
Trigger: TTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTG...CAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCCTGCTTATCCCACGTTaGCAGGGCTTCTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVLLIPR*QGFSCF
Trigger: GAAACACGAGAAGCCCTGCCAACGTGGGATAAGCAG...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264389.7
ENST00000503682.5
CDS-3UTR TCA 90 bp GATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCCAGCCAGATCTTTATaGGAGCCGCTCGAATTCATG +
Preference number: 4 (lower is better)
Translates to: DSETDLHNMEKDVMCTEVPARSL*EPLEFM
Trigger: CATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGG...AACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCCCAGCCAGATCTTTATaGGAGCCGCTCGAATTCATG +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVPARSL*EPLEFM
Trigger: CATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGG...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCGCTTTTTCCAGGATCTaGCGATACTTGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVAFSRI*RYLPAR
Trigger: TCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGC...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATGCGAGATCACGAGACTaGCATTCTCATTTACCATTG +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDARSRD*HSHLPL
Trigger: CAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGC...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAGTAGTTGCTTTTTGGTaGGGCATCAGCATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSVVAFW*GISMAA
Trigger: TGCTGCCATGCTGATGCCTCACCAAAAAGCAACTAC...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAAATCAGTCAGCAACTaGCGCGAGATCACGAGACTG +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVKSVSN*REITRL
Trigger: CAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTT...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TGTGCAAAAATCAGTCAGCAACTGCCGCGAGATCACGAGACTGACATTCTCATTCTTATGGAAGCAACCTaGTCCTCAAATGAAATGACT +
Preference number: 4 (lower is better)
Translates to: CAKISQQLPRDHETDILILMEAT*SSNEMT
Trigger: AGTCATTTCATTTGAGGAGCAGGTTGCTTCCATAAG...AATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR GCA 90 bp ACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGACACCAACACTTGGGCTaGATTTCTCCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TDLHNMEKDVMCTEVLQGHQHLG*ISPIFF
Trigger: GAAGAAGATTGGAGAAATGCAGCCCAAGTGTTGGTG...TCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGGGCTTCCATGGCTTGTaGTGTCCATTCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMGFHGL*CPFWCC
Trigger: ACAGCACCAGAATGGACAGCACAAGCCATGGAAGCC...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTGTGCACAGAAGTTCTaGAAGGATTCACTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDCAQKF*KDSLSH
Trigger: ATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACA...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCAAGATGGGAGGAACTaGTTGAGCCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: DSETDLHNMEKDVMCTEVQDGRN*LSPGVQ
Trigger: TTGAACTCCTGGGCTCAAGCAGTTCCTCCCATCTTG...AACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503682.5
CDS-3UTR GCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATTGGCAGGGCTTCTCGTaGTGCCATGACATGGATGAA +
Preference number: 4 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDWQGFS*CHDMDE
Trigger: TTCATCCATGTCATGGCAGCACGAGAAGCCCTGCCA...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR CCA 90 bp ACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGAATTCCCACCAACACTTaGGCTGCATTTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: TDLHNMEKDVMCTEVLQGIPTNT*AAFLQS
Trigger: AGATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAAT...TCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp TTCCATGGCTTGTGCTGTCCATTCTGGTGCTGTTTGACTAATTTTCTCCAAAAGATTCCCACCAACACTTaGGCTGCATTTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: FHGLCCPFWCCLTNFLQKIPTNT*AAFLQS
Trigger: AGATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAAT...CTTTTGGAGAAAATTAGTCAAACAGCACCAGAATGGACAGCACAAGCCATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAAGCCTCTGCCTGGACTaGATCATCATCCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSSLCLD*IIILQI
Trigger: TATCTGGAGGATGATGATCCAGTCCAGGCAGAGGCT...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp AAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTGGAAACAAAGTGATTaGATCTGCTTATCCCACGTT +
Preference number: 4 (lower is better)
Translates to: KKMSCAQKFCKDSLSHLGWKQSD*ICLSHV
Trigger: AACGTGGGATAAGCAGATCCAATCACTTTGTTTCCA...GCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATTTTGGGAAGCCAAGATaGGAGGAACTGCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDFGKPR*EELLEP
Trigger: GGGCTCAAGCAGTTCCTCCCATCTTGGCTTCCCAAA...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503682.5
CDS-3UTR CCA 90 bp ATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGCACTTTATAATGGTTaGTCAGACATTCCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: MSCAQKFCKDSLSHLGFHALYNG*SDIPVC
Trigger: ACAAACTGGAATGTCTGACCAACCATTATAAAGTGC...ATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CCA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGTCCAGAGACAGAAGATaGATTGGTGGTTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKSRDRR*IGGCQK
Trigger: CTTCTGGCAACCACCAATCCATCTTCTGTCTCTGGA...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR TCA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGCTTTTTCCAGGATCTaGCGATACTTGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRAFSRI*RYLPAR
Trigger: TCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGC...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAACCTGCTCCTCAAATaGAATGACTCTAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQNLLLK*NDSRLD
Trigger: ATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTT...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGTAGTTGCTTTTTGGTaGGGCATCAGCATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRVVAFW*GISMAA
Trigger: TGCTGCCATGCTGATGCCTCACCAAAAAGCAACTAC...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGCACTTGGAAACAAAGTaGTTGGATCTGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: CTTWKKMSCAQKFCKDSLHLETK*LDLLIP
Trigger: TGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTG...CAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACCTAAAGATACTATGCTaGGTGGAATCAGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SAQHGKRCHVHRSSARIHLKILC*VESAKR
Trigger: CCTTTTGGCTGATTCCACTCAGCATAGTATCTTTAG...GTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR GCA 90 bp AATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTAAATCAGTCAGCAACTaGCGCGAGATCACGAGACTG +
Preference number: 4 (lower is better)
Translates to: NALEIVKLICTTWKKMSCKSVSN*REITRL
Trigger: CAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTT...ACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGAAATCAGTCAGCAACTaGCGCGAGATCACGAGACTG +
Preference number: 4 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMKSVSN*REITRL
Trigger: CAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTT...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATATTTATGTAAGCCTCTaGCTGGACTGGATCATCATC +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDIYVSL*LDWIII
Trigger: GATGATGATCCAGTCCAGGCAGAGGCTTACATAAAT...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TTCCATGGCTTGTGCTGTCCATTCTGGTGCTGTTTGACTAATTTTCTCCAAAAGATTTATGTAAGCCTCTaGCTGGACTGGATCATCATC +
Preference number: 4 (lower is better)
Translates to: FHGLCCPFWCCLTNFLQKIYVSL*LDWIII
Trigger: GATGATGATCCAGTCCAGGCAGAGGCTTACATAAAT...CTTTTGGAGAAAATTAGTCAAACAGCACCAGAATGGACAGCACAAGCCATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATGCTAAGATCGTACAGTaGAAAGCATGTTTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDAKIVQ*KACFKA
Trigger: GGCCTTAAAACATGCTTTGCACTGTACGATCTTAGC...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAATGTGCACAGAAGTTCTaGAAGGATTCACTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTECAQKF*KDSLSH
Trigger: ATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACA...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGTGTGCACAGAAGTTCTaGAAGGATTCACTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKCAQKF*KDSLSH
Trigger: ATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACA...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAACAAGATGCTGTCTTATaGAAGCAACCTGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTEQDAVL*KQPAPQ
Trigger: TTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTG...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GATCTTTTCCAAGGTGAAGTGATAGATTTCTTTGGCTGTGCTATCAGGCAAGTTCAAGATGCTGTCTTATaGAAGCAACCTGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: DLFQGEVIDFFGCAIRQVQDAVL*KQPAPQ
Trigger: TTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTG...AACTTGCCTGATAGCACAGCCAAAGAAATCTATCACTTCACCTTGGAAAAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR CCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGCAAGATGCTGTCTTATaGAAGCAACCTGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQQDAVL*KQPAPQ
Trigger: TTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTG...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCACGTTTCTCACGTCTGTaGTTTACCGTCCTTCGATCT +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSRFSRL*FTVLRS
Trigger: AGATCGAAGGACGGTAAACCACAGACGTGAGAAACG...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR TCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCGCGAGATCACGAGACTaGCATTCTCATTTACCATTG +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVARSRD*HSHLPL
Trigger: CAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGC...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAACCTGCTCCTCAAATaGAATGACTCTAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVNLLLK*NDSRLD
Trigger: ATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTT...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTTGGTTGATTCATTCTaGAGCAACGATGCTCGATTT +
Preference number: 4 (lower is better)
Translates to: SAQHGKRCHVHRSSARIHLVDSF*SNDARF
Trigger: AAATCGAGCATCGTTGCTTCAGAATGAATCAACCAA...GTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGCACTTGGAAACAAAGTaGTTGGATCTGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKHLETK*LDLLIP
Trigger: TGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTG...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATCATTCTGGTGCTGTTTaGCTAATTTTCTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDHSGAV*LIFSKR
Trigger: CCTTTTGGAGAAAATTAGTCAAACAGCACCAGAATG...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGACTTATGGAAGCAACCTaGTCCTCAAATGAAATGACT +
Preference number: 4 (lower is better)
Translates to: TDLHNMEKDVMCTEVLQGLMEAT*SSNEMT
Trigger: AGTCATTTCATTTGAGGAGCAGGTTGCTTCCATAAG...TCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TTCCATGGCTTGTGCTGTCCATTCTGGTGCTGTTTGACTAATTTTCTCCAAAAGCTTATGGAAGCAACCTaGTCCTCAAATGAAATGACT +
Preference number: 4 (lower is better)
Translates to: FHGLCCPFWCCLTNFLQKLMEAT*SSNEMT
Trigger: AGTCATTTCATTTGAGGAGCAGGTTGCTTCCATAAG...CTTTTGGAGAAAATTAGTCAAACAGCACCAGAATGGACAGCACAAGCCATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCCACCAACACTTGGGCTaGATTTCTCCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVHQHLG*ISPIFF
Trigger: GAAGAAGATTGGAGAAATGCAGCCCAAGTGTTGGTG...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGGCTAAGATCGTACAGTaGAAAGCATGTTTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQAKIVQ*KACFKA
Trigger: GGCCTTAAAACATGCTTTGCACTGTACGATCTTAGC...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAACCATCAGCTGTAGTTaGTTTTTGGTGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSTISCS*FLVRHQ
Trigger: CTGATGCCTCACCAAAAAGCAACTACAGCTGATGGT...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGCAAAGTGATTGGATCTaGTTATCCCACGTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMQSDWI*LSHVGR
Trigger: CCTGCCAACGTGGGATAAGCAGATCCAATCACTTTG...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTGCTGTCCATTCTGGTaGTGTTTGACTAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDCCPFW*CLTNFL
Trigger: GAGAAAATTAGTCAAACAGCACCAGAATGGACAGCA...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATGCTGTCCATTCTGGTaGTGTTTGACTAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: TDLHNMEKDVMCTEVLQGCCPFW*CLTNFL
Trigger: GAGAAAATTAGTCAAACAGCACCAGAATGGACAGCA...TCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATAGTGATAGATTTCTTTaGCTGTGCTATCAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDSDRFL*LCYQAS
Trigger: ACTTGCCTGATAGCACAGCCAAAGAAATCTATCACT...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp TGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGTGATAGATTTCTTTaGCTGTGCTATCAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: CTTWKKMSCAQKFCKDSLSDRFL*LCYQAS
Trigger: ACTTGCCTGATAGCACAGCCAAAGAAATCTATCACT...CAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGCCTCTGCCTGGACTaGATCATCATCCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKSLCLD*IIILQI
Trigger: TATCTGGAGGATGATGATCCAGTCCAGGCAGAGGCT...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp TGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGTGGAAACAAAGTGATTaGATCTGCTTATCCCACGTT +
Preference number: 4 (lower is better)
Translates to: CTTWKKMSCAQKFCKDSLWKQSD*ICLSHV
Trigger: AACGTGGGATAAGCAGATCCAATCACTTTGTTTCCA...CAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp ACGGAATCCAGCATAAAAGGGATTGAAATGTATAAGGTCATGATGCAAATGCTTGCGAGATCACGAGACTaGCATTCTCATTTACCATTG +
Preference number: 4 (lower is better)
Translates to: TESSIKGIEMYKVMMQMLARSRD*HSHLPL
Trigger: CAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGC...AAGCATTTGCATCATGACCTTATACATTTCAATCCCTTTTATGCTGGATTCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGGGATCTTTTCCAAGGTaGAGTGATAGATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQGSFPR*SDRFLW
Trigger: CCAAAGAAATCTATCACTTCACCTTGGAAAAGATCC...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGAACCTGCTCCTCAAATaGAATGACTCTAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRNLLLK*NDSRLD
Trigger: ATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTT...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp AATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTAACCTGCTCCTCAAATaGAATGACTCTAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: NALEIVKLICTTWKKMSCNLLLK*NDSRLD
Trigger: ATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTT...ACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCCACTTGGAAACAAAGTaGTTGGATCTGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVHLETK*LDLLIP
Trigger: TGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTG...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATAATACACAGAGACCCTaGAATATATGGGAACTACAT +
Preference number: 4 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDNTQRP*NIWELH
Trigger: ATGTAGTTCCCATATATTTCAGGGTCTCTGTGTATT...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TATATAGATGCAAGATGCTGTCTTATGGAAGCAACCTGCTCCTCAAATGAAATGGCTTTTTCCAGGATCTaGCGATACCTACAACAATAC +
Preference number: 4 (lower is better)
Translates to: YIDARCCLMEATCSSNEMAFSRI*RYLQQY
Trigger: GTATTGTTGTAGGTATCGTCAGATCCTGGAAAAAGC...CATTTCATTTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTGCATCTATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR GCA 90 bp ACGGAATCCAGCATAAAAGGGATTGAAATGTATAAGGTCATGATGCAAATGCTTGGATCTGACGATACTTaGCAGCCAGATCTTTATGAG +
Preference number: 4 (lower is better)
Translates to: TESSIKGIEMYKVMMQMLGSDDT*QPDLYE
Trigger: CTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCC...AAGCATTTGCATCATGACCTTATACATTTCAATCCCTTTTATGCTGGATTCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGCTTATGGAAGCAACCTaGTCCTCAAATGAAATGACT +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQLMEAT*SSNEMT
Trigger: AGTCATTTCATTTGAGGAGCAGGTTGCTTCCATAAG...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATATATAGATGCAAGATaGTGTCTTATGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: TDLHNMEKDVMCTEVLQGYIDAR*CLMEAT
Trigger: GGTTGCTTCCATAAGACAGCATCTTGCATCTATATA...TCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp CTGGATCTTTTCCAAGGTGAAGTGATAGATTTCTTTGGCTGTGCTATCAGGCAATATATAGATGCAAGATaGTGTCTTATGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: LDLFQGEVIDFFGCAIRQYIDAR*CLMEAT
Trigger: GGTTGCTTCCATAAGACAGCATCTTGCATCTATATA...TTGCCTGATAGCACAGCCAAAGAAATCTATCACTTCACCTTGGAAAAGATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR GCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAATTTATGTAAGCCTCTaGCTGGACTGGATCATCATC +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSIYVSL*LDWIII
Trigger: GATGATGATCCAGTCCAGGCAGAGGCTTACATAAAT...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGATTCTGAAGCAACGATaGTCGATTTATGTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKILKQR*SIYVSL
Trigger: GAGGCTTACATAAATCGAGCATCGTTGCTTCAGAAT...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCAGCTAAGATCGTACAGTaGAAAGCATGTTTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: ANALEIVKLICTTWKKMSAKIVQ*KACFKA
Trigger: GGCCTTAAAACATGCTTTGCACTGTACGATCTTAGC...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTACCATCAGCTGTAGTTaGTTTTTGGTGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: NALEIVKLICTTWKKMSCTISCS*FLVRHQ
Trigger: CTGATGCCTCACCAAAAAGCAACTACAGCTGATGGT...ACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAACAAAGTGATTGGATCTaGTTATCCCACGTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKQSDWI*LSHVGR
Trigger: CCTGCCAACGTGGGATAAGCAGATCCAATCACTTTG...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAATGCTGTCCATTCTGGTaGTGTTTGACTAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTECCPFW*CLTNFL
Trigger: GAGAAAATTAGTCAAACAGCACCAGAATGGACAGCA...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGTGTGCACAGAAGTTCTaGAAGGATTCACTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRCAQKF*KDSLSH
Trigger: ATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACA...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACAGATGGATTGGTGGTTaGCAGAAGTTTCAAAATGAA +
Preference number: 4 (lower is better)
Translates to: SAQHGKRCHVHRSSARIHRWIGG*QKFQNE
Trigger: TTCATTTTGAAACTTCTGGCAACCACCAATCCATCT...GTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR CCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAGTGATAGATTTCTTTaGCTGTGCTATCAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQSDRFL*LCYQAS
Trigger: ACTTGCCTGATAGCACAGCCAAAGAAATCTATCACT...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp AATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTCAAGATGCTGTCTTATaGAAGCAACCTGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: NALEIVKLICTTWKKMSCQDAVL*KQPAPQ
Trigger: TTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTG...ACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGATTCCCACCAACACTTaGGCTGCATTTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRIPTNT*AAFLQS
Trigger: AGATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAAT...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp AATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTATTCCCACCAACACTTaGGCTGCATTTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: NALEIVKLICTTWKKMSCIPTNT*AAFLQS
Trigger: AGATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAAT...ACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAATGGAAACAAAGTGATTaGATCTGCTTATCCCACGTT +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTEWKQSD*ICLSHV
Trigger: AACGTGGGATAAGCAGATCCAATCACTTTGTTTCCA...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGTGGAAACAAAGTGATTaGATCTGCTTATCCCACGTT +
Preference number: 4 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKWKQSD*ICLSHV
Trigger: AACGTGGGATAAGCAGATCCAATCACTTTGTTTCCA...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp ACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTGTGCTGTCCATTCTaGTGCTGTTTGACTAATTTT +
Preference number: 4 (lower is better)
Translates to: TDLHNMEKDVMCTEVLQGLCCPF*CCLTNF
Trigger: AAAATTAGTCAAACAGCACCAGAATGGACAGCACAA...TCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAACTGATCTGCACAACATaGAAAAAGATGTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTELICTT*KKMSCA
Trigger: TGCACATGACATCTTTTTCCATGTTGTGCAGATCAG...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp GATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTAGACAGAAGATGGATTaGTGGTTGCCAGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: DSETDLHNMEKDVMCTEVRQKMD*WLPEVS
Trigger: TGAAACTTCTGGCAACCACCAATCCATCTTCTGTCT...AACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR TCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAGCGAGATCACGAGACTaGCATTCTCATTTACCATTG +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKARSRD*HSHLPL
Trigger: CAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGC...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp GATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTTTGGTTGATTCATTCTaGAGCAACGATGCTCGATTT +
Preference number: 4 (lower is better)
Translates to: DSETDLHNMEKDVMCTEVLVDSF*SNDARF
Trigger: AAATCGAGCATCGTTGCTTCAGAATGAATCAACCAA...AACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAATCTCGTGTTTCAAAATaGACTATTCCATCAATCTGG +
Preference number: 4 (lower is better)
Translates to: GDSETDLHNMEKDVMCTESRVSK*TIPSIW
Trigger: CCAGATTGATGGAATAGTTCATTTTGAAACACGAGA...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264389.7
ENST00000503682.5
CDS-3UTR TCA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGAATACACAGAGACCCTaGAATATATGGGAACTACAT +
Preference number: 4 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKNTQRP*NIWELH
Trigger: ATGTAGTTCCCATATATTTCAGGGTCTCTGTGTATT...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGCCAGAAGTTTCAAAATaGACTATTCCATCAATCTGG +
Preference number: 4 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQPEVSK*TIPSIW
Trigger: CCAGATTGATGGAATAGTTCATTTTGAAACTTCTGG...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR GCA 90 bp AATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTATTTATGTAAGCCTCTaGCTGGACTGGATCATCATC +
Preference number: 4 (lower is better)
Translates to: NALEIVKLICTTWKKMSCIYVSL*LDWIII
Trigger: GATGATGATCCAGTCCAGGCAGAGGCTTACATAAAT...ACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAACCATCAGCTGTAGTTaGTTTTTGGTGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKTISCS*FLVRHQ
Trigger: CTGATGCCTCACCAAAAAGCAACTACAGCTGATGGT...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp TCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACATAGTGAAACTGATCTaGACAACATGGAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: SAQHGKRCHVHRSSARIHIVKLI*TTWKKM
Trigger: CATCTTTTTCCATGTTGTGCAGATCAGTTTCACTAT...GTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAACTCATCAGCTGTAGTTaGTTTTTGGTGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKLISCS*FLVRHQ
Trigger: CTGATGCCTCACCAAAAAGCAACTACAGCTGATGAG...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503682.5
CDS-3UTR CCA 90 bp TTCTCATATATAGATGCAAGATGCTGTCTTATGGAAGCAACCTGCTCCTCAAATAGTGATAGATTTCTTTaGCTGTGCTATCAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: FSYIDARCCLMEATCSSNSDRFL*LCYQAS
Trigger: ACTTGCCTGATAGCACAGCCAAAGAAATCTATCACT...ATTTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTGCATCTATATATGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR CCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCCTGATCTGCACAACATaGAAAAAGATGTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVLICTT*KKMSCA
Trigger: TGCACATGACATCTTTTTCCATGTTGTGCAGATCAG...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp AATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGGATCTTTTCCAAGGTaGAGTGATAGATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NALEIVKLICTTWKKMSCGSFPR*SDRFLW
Trigger: CCAAAGAAATCTATCACTTCACCTTGGAAAAGATCC...ACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATTTGGTTGATTCATTCTaGAGCAACGATGCTCGATTT +
Preference number: 4 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDLVDSF*SNDARF
Trigger: AAATCGAGCATCGTTGCTTCAGAATGAATCAACCAA...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGCATTCTGGTGCTGTTTaGCTAATTTTCTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRHSGAV*LIFSKR
Trigger: CCTTTTGGAGAAAATTAGTCAAACAGCACCAGAATG...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAGCCTGTGGTAAAGAATaGGTTTTGTTTCCGATTCAC +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKACGKE*VLFPIH
Trigger: GTGAATCGGAAACAAAACTCATTCTTTACCACAGGC...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR GCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGATTCTGAAGCAACGATaGTCGATTTATGTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMILKQR*SIYVSL
Trigger: GAGGCTTACATAAATCGAGCATCGTTGCTTCAGAAT...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATATTCTGAAGCAACGATaGTCGATTTATGTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDILKQR*SIYVSL
Trigger: GAGGCTTACATAAATCGAGCATCGTTGCTTCAGAAT...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCTGTCCATTCTGGTaGTGTTTGACTAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMCCPFW*CLTNFL
Trigger: GAGAAAATTAGTCAAACAGCACCAGAATGGACAGCA...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCTTGTGCTGTCCATTCTaGTGCTGTTTGACTAATTTT +
Preference number: 4 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVLCCPF*CCLTNF
Trigger: AAAATTAGTCAAACAGCACCAGAATGGACAGCACAA...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CCA 90 bp ACGGAATCCAGCATAAAAGGGATTGAAATGTATAAGGTCATGATGCAAATGCTTCTGATCTGCACAACATaGAAAAAGATGTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: TESSIKGIEMYKVMMQMLLICTT*KKMSCA
Trigger: TGCACATGACATCTTTTTCCATGTTGTGCAGATCAG...AAGCATTTGCATCATGACCTTATACATTTCAATCCCTTTTATGCTGGATTCCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAGGATCTTTTCCAAGGTaGAGTGATAGATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKGSFPR*SDRFLW
Trigger: CCAAAGAAATCTATCACTTCACCTTGGAAAAGATCC...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGAATACACAGAGACCCTaGAATATATGGGAACTACAT +
Preference number: 4 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMNTQRP*NIWELH
Trigger: ATGTAGTTCCCATATATTTCAGGGTCTCTGTGTATT...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGAATACACAGAGACCCTaGAATATATGGGAACTACAT +
Preference number: 4 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRNTQRP*NIWELH
Trigger: ATGTAGTTCCCATATATTTCAGGGTCTCTGTGTATT...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATTATATAGATGCAAGATaGTGTCTTATGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDYIDAR*CLMEAT
Trigger: GGTTGCTTCCATAAGACAGCATCTTGCATCTATATA...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTTATATAGATGCAAGATaGTGTCTTATGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: NALEIVKLICTTWKKMSCYIDAR*CLMEAT
Trigger: GGTTGCTTCCATAAGACAGCATCTTGCATCTATATA...ACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp GATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTATAGTGAAACTGATCTaGACAACATGGAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: DSETDLHNMEKDVMCTEVIVKLI*TTWKKM
Trigger: CATCTTTTTCCATGTTGTGCAGATCAGTTTCACTAT...AACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR TCA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAATCTCGTGTTTCAAAATaGACTATTCCATCAATCTGG +
Preference number: 4 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKSRVSK*TIPSIW
Trigger: CCAGATTGATGGAATAGTTCATTTTGAAACACGAGA...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264389.7
ENST00000503682.5
CDS-3UTR GCA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATCTCATTGTACCTTTGTaGAGCTTCAATGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDLIVPL*SFNEFS
Trigger: AGAAAATTCATTGAAGCTGCACAAAGGTACAATGAG...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGCTCATTGTACCTTTGTaGAGCTTCAATGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMLIVPL*SFNEFS
Trigger: AGAAAATTCATTGAAGCTGCACAAAGGTACAATGAG...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGATAGTGAAACTGATCTaGACAACATGGAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMIVKLI*TTWKKM
Trigger: CATCTTTTTCCATGTTGTGCAGATCAGTTTCACTAT...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR GCA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGATAGTGAAACTGATCTaGACAACATGGAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRIVKLI*TTWKKM
Trigger: CATCTTTTTCCATGTTGTGCAGATCAGTTTCACTAT...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS CCA 90 bp AGTGCAGCCAGAGGGAACCTGAGATGCTACAGAGTAGCGTCTGTGTaGGCCAGAGCGTCGGGTGTGGGAGCCTGGGCTAGCTCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: SAARGNLRCYRVASV*ARASGVGAWASSAP
Trigger: GGGGGCGGAGCTAGCCCAGGCTCCCACACCCGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS GCA 90 bp AGAGCCGCTCGAATTCATGAGCTGGGCCAAATCCTGTCGCACGGCTaGCGCCATCTTTCTCCCAGCTCAGCGGTGGATGCGGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RAARIHELGQILSHG*RHLSPSSAVDAGAS
Trigger: AGAGGCCCCCGCATCCACCGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000509093.5
ENST00000509317.5
ENST00000510801.5
ENST00000511891.5
CDS CCA 90 bp GAAGGTCCAAAGAGAGGCCAGATTCGGTGTGAGGCCGGCCAGCGATaGGAAGAGGTACCAGGGAAGGCTACTAAGGCCAGGGTAGCAGTC +
Preference number: 5 (lower is better)
Translates to: EGPKRGQIRCEAGQR*EEVPGKATKARVAV
Trigger: GACTGCTACCCTGGCCTTAGTAGCCTTCCCTGGTACCTCTTCCCATCGCTGGCCGGCCTCACACCGAATCTGGCCTCTCTTTGGACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511708.1
CDS GCA 90 bp AAAACGAGTGTGGTCCTCCAGAGTGCAGCCAGAGGGAACCTGAGATaGTACAGAGTAGCGTCTGTGTGGGCCAGAGCGTCGGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: KTSVVLQSAARGNLR*YRVASVWARASGVG
Trigger: TCCCACACCCGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCACACTCGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CAA 90 bp TCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCGCTCCGCCCCCAGGGTaGAGTGATGCGGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SCAQKFCKDSLSHLGFHGAPPPG*SDAELH
Trigger: GTGGAGCTCCGCATCACTCAACCCTGGGGGCGGAGC...GCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS TCA 90 bp GACGATACTTGCCAGCCAGATCTTTATGAGAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTCGCACGGCTGCCGCCATCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: DDTCQPDLYESRSNS*AGPNPVARLPPSFS
Trigger: GGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000506443.5
ENST00000509093.5
ENST00000511891.5
CDS TCA 90 bp TGTACTGTTTGCCAGCCAGATCTTTATGAGAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTCGCACGGCTGCCGCCATCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: CTVCQPDLYESRSNS*AGPNPVARLPPSFS
Trigger: GGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAACAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509317.5
CDS TCA 90 bp ATTTACCATTGCCAGCCAGATCTTTATGAGAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTCGCACGGCTGCCGCCATCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: IYHCQPDLYESRSNS*AGPNPVARLPPSFS
Trigger: GGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAATGGTAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510801.5
CDS CCA 90 bp AGAGAAAATACCCGAAACACAAGGACCCACAGAAGACAGTCTGAATaGTCTGGACGACATGACAGCGGCCATACCGCCTCAACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RENTRNTRTHRRQSE*SGRHDSGHTASTSA
Trigger: GGCTGAGGTTGAGGCGGTATGGCCGCTGTCATGTCGTCCAGACCATTCAGACTGTCTTCTGTGGGTCCTTGTGTTTCGGGTATTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511708.1
CDS TCA 90 bp ATAATGTTTTGCCAGCCAGATCTTTATGAGAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTCGCACGGCTGCCGCCATCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: IMFCQPDLYESRSNS*AGPNPVARLPPSFS
Trigger: GGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAAACATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507376.1
CDS-3UTR CAA 90 bp ACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATGTAATCCCAGCACTTaGGGCAGCCGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: TDLHNMEKDVMCTEVLQGCNPST*GSRGGR
Trigger: CCGCCCGCCTCGGCTGCCCAAAGTGCTGGGATTACA...TCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS CCA 90 bp GACCCACGATATGAGCACATTCCGCCTATGTGCCATCAGAGTTGGTaGCAGAGAAAATACCCGAAACACAAGGACCCACAGAAGACAGTC +
Preference number: 5 (lower is better)
Translates to: DPRYEHIPPMCHQSW*QRKYPKHKDPQKTV
Trigger: GACTGTCTTCTGTGGGTCCTTGTGTTTCGGGTATTTTCTCTGCCACCAACTCTGATGGCACATAGGCGGAATGTGCTCATATCGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511708.1
CDS-3UTR CAA 90 bp ACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTGTGCTGAGCTGTAGTTGCTTTTaGGTGAGGCATCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: TEVLQGFTEPSGLPWLVLSCSCF*VRHQHG
Trigger: GCCATGCTGATGCCTCACCAAAAAGCAACTACAGCT...CAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp AAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCCTGGGCTTCCATGGCTaGTGCTGTCCATTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: KKMSCAQKFCKDSLSHLGLGFHG*CCPFWC
Trigger: GCACCAGAATGGACAGCACAAGCCATGGAAGCCCAG...GCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp ACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGGCTTGTGCTGAATTCCCACCAACACTaGGGCTGCATTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: TEVLQGFTEPSGLPWLVLNSHQH*GCISPI
Trigger: GATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATT...CAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS GCA 90 bp AGCATCCGAGAACGCTGCTGCCCTGCTGATGCTAAGATCGTACAGTaGAAAGCATGTTTTAAGGCCTCTAGTCTTTCACTTTCGTGGACT +
Preference number: 5 (lower is better)
Translates to: SIRERCCPADAKIVQ*KACFKASSLSLSWT
Trigger: AGTCCACGAAAGTGAAAGACTAGAGGCCTTAAAACATGCTTTGCACTGTACGATCTTAGCATCAGCAGGGCAGCAGCGTTCTCGGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000509317.5
ENST00000511653.1
CDS GCA 90 bp TACTGTAGACATCCTGACCCACGATATGAGCACATTCCGCCTATGTaGCATCAGAGTTGGTGGCAGAGAAAATACCCGAAACACAAGGAC +
Preference number: 5 (lower is better)
Translates to: YCRHPDPRYEHIPPM*HQSWWQRKYPKHKD
Trigger: GTCCTTGTGTTTCGGGTATTTTCTCTGCCACCAACTCTGATGGCACATAGGCGGAATGTGCTCATATCGTGGGTCAGGATGTCTACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511708.1
CDS-3UTR CAA 90 bp ATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATAATTCCCACCAACACTaGGGCTGCATTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: MSCAQKFCKDSLSHLGFHNSHQH*GCISPI
Trigger: GATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATT...ATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGCTGGGCTTCCATGGCTaGTGCTGTCCATTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQLGFHG*CCPFWC
Trigger: GCACCAGAATGGACAGCACAAGCCATGGAAGCCCAG...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAACTGGGCTTCCATGGCTaGTGCTGTCCATTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: GDSETDLHNMEKDVMCTELGFHG*CCPFWC
Trigger: GCACCAGAATGGACAGCACAAGCCATGGAAGCCCAG...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS GCA 90 bp CTATCAGGCAAGTTAGGAAGATGTGTGCAAAAATCAGTCAGCAACTaGCGCGAGATCACGAGACTGACATTCTCATTTACCATTGCCAGC +
Preference number: 5 (lower is better)
Translates to: LSGKLGRCVQKSVSN*REITRLTFSFTIAS
Trigger: GCTGGCAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACACATCTTCCTAACTTGCCTGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510801.5
CDS-3UTR CAA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAATCTGCTTATCCCACGTaGGCAGGGCTTCTCGTGCTT +
Preference number: 5 (lower is better)
Translates to: GDSETDLHNMEKDVMCTESAYPT*AGLLVL
Trigger: AAGCACGAGAAGCCCTGCCAACGTGGGATAAGCAGA...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CAA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATCTGCTTATCCCACGTaGGCAGGGCTTCTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: ANALEIVKLICTTWKKMSSAYPT*AGLLVL
Trigger: CAGCACGAGAAGCCCTGCCAACGTGGGATAAGCAGA...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR CAA 90 bp GATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCAGAGCTCATTGTACCTTaGTGCAGCTTCAATGAATTT +
Preference number: 5 (lower is better)
Translates to: DVMCTEVLQGFTEPSGLPELIVP*CSFNEF
Trigger: AAATTCATTGAAGCTGCACAAAGGTACAATGAGCTC...TGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGTCTGCTTATCCCACGTaGGCAGGGCTTCTCGTGTTT +
Preference number: 5 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQSAYPT*AGLLVF
Trigger: AAACACGAGAAGCCCTGCCAACGTGGGATAAGCAGA...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264389.7
ENST00000503682.5
CDS-3UTR CAA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGTCTGCTTATCCCACGTaGGCAGGGCTTCTCGTGTTT +
Preference number: 5 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKSAYPT*AGLLVF
Trigger: AAACACGAGAAGCCCTGCCAACGTGGGATAAGCAGA...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264389.7
ENST00000503682.5
CDS-3UTR CAA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATCTGGGCTTCCATGGCTaGTGCTGTCCATTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDLGFHG*CCPFWC
Trigger: GCACCAGAATGGACAGCACAAGCCATGGAAGCCCAG...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp ATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCTTCCATGAGCTCATTGTACCTTaGTGCAGCTTCAATGAATTT +
Preference number: 5 (lower is better)
Translates to: MSCAQKFCKDSLSHLGFHELIVP*CSFNEF
Trigger: AAATTCATTGAAGCTGCACAAAGGTACAATGAGCTC...ATGGAAGCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAAGCTGTAGTTGCTTTTaGGTGAGGCATCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: GDSETDLHNMEKDVMCTESCSCF*VRHQHG
Trigger: GCCATGCTGATGCCTCACCAAAAAGCAACTACAGCT...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGTCTCACGCTTGGACTTaGGATTGGCTGATGAACTCC +
Preference number: 5 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQSHAWT*DWLMNS
Trigger: GGAGTTCATCAGCCAATCCAAAGTCCAAGCGTGAGA...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CAA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAAATTCCCACCAACACTaGGGCTGCATTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: GDSETDLHNMEKDVMCTENSHQH*GCISPI
Trigger: GATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATT...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAATTCCCACCAACACTaGGGCTGCATTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQNSHQH*GCISPI
Trigger: GATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATT...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp AAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCCCATTCTGGTGCTGTTaGACTAATTTTCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: KKMSCAQKFCKDSLSHLGPFWCC*TNFLQK
Trigger: CTTTTGGAGAAAATTAGTCAAACAGCACCAGAATGG...GCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp TGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGTCAGACATTCCAGTTaGTCCAGTACAAAGCGATTT +
Preference number: 5 (lower is better)
Translates to: WKKMSCAQKFCKDSLSHLVRHSS*SSTKRF
Trigger: AAATCGCTTTGTACTGGACAAACTGGAATGTCTGAC...CAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS-3UTR CAA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGGAGACAGAAGATGGATaGGTGGTTGCCAGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQETEDG*VVARSF
Trigger: GAAACTTCTGGCAACCACCAATCCATCTTCTGTCTC...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR CAA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATCACTTTCGTGGACTATaGTCTTGTAAGAGAGCTCAT +
Preference number: 5 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDHFRGL*SCKRAH
Trigger: ATGAGCTCTCTTACAAGACAATAGTCCACGAAAGTG...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp AAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCACTGAGCCATCTGGGCAGCAAATTCTTGAAGTaGATTTCCTCTGATGATCCT +
Preference number: 5 (lower is better)
Translates to: KKMSCAQKFCKDSLSHLGSKFLK*ISSDDP
Trigger: AGGATCATCAGAGGAAATCAACTTCAAGAATTTGCT...GCCCAGATGGCTCAGTGAATCCTTGCAGAACTTCTGTGCACATGACATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGAGCTGTAGTTGCTTTTaGGTGAGGCATCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRSCSCF*VRHQHG
Trigger: GCCATGCTGATGCCTCACCAAAAAGCAACTACAGCT...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGAGCTGTAGTTGCTTTTaGGTGAGGCATCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMSCSCF*VRHQHG
Trigger: GCCATGCTGATGCCTCACCAAAAAGCAACTACAGCT...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATTCCTTCGGTTATCATTaGAGATGCTATCTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDSFGYH*RCYLFR
Trigger: GCGGAAAAGATAGCATCTCAAATGATAACCGAAGGA...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000511653.1
CDS-3UTR CAA 90 bp CTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGGATGAGCTCATTGTACCTTaGTGCAGCTTCAATGAATTT +
Preference number: 5 (lower is better)
Translates to: LICTTWKKMSCAQKFCKDELIVP*CSFNEF
Trigger: AAATTCATTGAAGCTGCACAAAGGTACAATGAGCTC...ATCCTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp TTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGCACTTTCGTGGACTATaGTCTTGTAAGAGAGCTCAT +
Preference number: 5 (lower is better)
Translates to: LEIVKLICTTWKKMSCAQHFRGL*SCKRAH
Trigger: ATGAGCTCTCTTACAAGACAATAGTCCACGAAAGTG...CTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp AAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAGTTCTGCAAGCATGGCAGCAAATTCTaGAAGTTGATTTCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: KLICTTWKKMSCAQKFCKHGSKF*KLISSD
Trigger: ATCAGAGGAAATCAACTTCAAGAATTTGCTGCCATG...CTTGCAGAACTTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS TCA 90 bp ATCCAGAGACAGAAGATGGATTGGTGGTTGCCAGAAGTTTCAAAATaGACTATTCCATCAATCTGGTCAATAAATCCATTCATACGTCCT +
Preference number: 5 (lower is better)
Translates to: IQRQKMDWWLPEVSK*TIPSIWSINPFIRP
Trigger: AGGACGTATGAATGGATTTATTGACCAGATTGATGGAATAGTTCATTTTGAAACTTCTGGCAACCACCAATCCATCTTCTGTCTCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS GCA 90 bp GTGAACCTAAGCATTCTATATAAATTTCGACAAAATTCAGATTCCTaGAAACATCACTACTGTAGACATCCTGACCCACGATATGAGCAC +
Preference number: 5 (lower is better)
Translates to: VNLSILYKFRQNSDS*KHHYCRHPDPRYEH
Trigger: GTGCTCATATCGTGGGTCAGGATGTCTACAGTAGTGATGTTTGCAGGAATCTGAATTTTGTCGAAATTTATATAGAATGCTTAGGTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511708.1
CDS-3UTR CAA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATCACTTTCGTGGACTATaGTCTTGTAAGAGAGCTCAT +
Preference number: 5 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDHFRGL*SCKRAH
Trigger: ATGAGCTCTCTTACAAGACAATAGTCCACGAAAGTG...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp GGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGTGCACAGAAAGCAAATTCTTGAAGTaGATTTCCTCTGATGATCCT +
Preference number: 5 (lower is better)
Translates to: GDSETDLHNMEKDVMCTESKFLK*ISSDDP
Trigger: AGGATCATCAGAGGAAATCAACTTCAAGAATTTGCT...TTCTGTGCACATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCACATGGCAGCAAATTCTaGAAGTTGATTTCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: ANALEIVKLICTTWKKMSHGSKF*KLISSD
Trigger: ATCAGAGGAAATCAACTTCAAGAATTTGCTGCCATG...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCCATGGCAGCAAATTCTaGAAGTTGATTTCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVHGSKF*KLISSD
Trigger: ATCAGAGGAAATCAACTTCAAGAATTTGCTGCCATG...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp GTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGGATTCCTTCGGTTATCATTaGAGATGCTATCTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: VLPALIMSSLNGIQHKRDSFGYH*RCYLFR
Trigger: GCGGAAAAGATAGCATCTCAAATGATAACCGAAGGA...ATCCCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000511653.1
CDS-3UTR CAA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGTCCTTCGGTTATCATTaGAGATGCTATCTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRSFGYH*RCYLFR
Trigger: GCGGAAAAGATAGCATCTCAAATGATAACCGAAGGA...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000511653.1
CDS-3UTR CAA 90 bp TGCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCCCATTCTGGTGCTGTTaGACTAATTTTCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: CKCFGDSETDLHNMEKDVPFWCC*TNFLQK
Trigger: CTTTTGGAGAAAATTAGTCAAACAGCACCAGAATGG...GACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp GCAAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCACCATTCTGGTGCTGTTaGACTAATTTTCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: ANALEIVKLICTTWKKMSPFWCC*TNFLQK
Trigger: CTTTTGGAGAAAATTAGTCAAACAGCACCAGAATGG...TGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS TCA 90 bp TATGCTGAGTGGAATCAGCCAAAAGGTCACATGTCACATATTGTATaGTTCCATTTATATGAACTATCCAGACTAGGTAAATCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: YAEWNQPKGHMSHIV*FHLYELSRLGKSRD
Trigger: GTCTCTGGATTTACCTAGTCTGGATAGTTCATATAAATGGAATCATACAATATGTGACATGTGACCTTTTGGCTGATTCCACTCAGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR CAA 90 bp AAATGCTTTGGAGATAGTGAAACTGATCTGCACAACATGGAAAAAGATGTCATGCATGGCAGCAAATTCTaGAAGTTGATTTCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: KCFGDSETDLHNMEKDVMHGSKF*KLISSD
Trigger: ATCAGAGGAAATCAACTTCAAGAATTTGCTGCCATG...CATGACATCTTTTTCCATGTTGTGCAGATCAGTTTCACTATCTCCAAAGCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp ACGGAATCCAGCATAAAAGGGATTGAAATGTATAAGGTCATGATGCAAATGCTTCCATTCTGGTGCTGTTaGACTAATTTTCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: TESSIKGIEMYKVMMQMLPFWCC*TNFLQK
Trigger: CTTTTGGAGAAAATTAGTCAAACAGCACCAGAATGG...AAGCATTTGCATCATGACCTTATACATTTCAATCCCTTTTATGCTGGATTCCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS GCA 90 bp ACTTTCGTGGACTATTGTCTTGTAAGAGAGCTCATTGTACCTTTGTaGAGCTTCAATGAATTTTCTTCTATAATCAAGAACACGTGCATA +
Preference number: 5 (lower is better)
Translates to: TFVDYCLVRELIVPL*SFNEFSSIIKNTCI
Trigger: TATGCACGTGTTCTTGATTATAGAAGAAAATTCATTGAAGCTGCACAAAGGTACAATGAGCTCTCTTACAAGACAATAGTCCACGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000509317.5
ENST00000511653.1
CDS CCA 90 bp GAACACGTGCATAGCATACCTTATAATGTATCTGTAATTGTTCATTaGTTGATTCATTCTGAAGCAACGATGCTCGATTTATGTAAGCCT +
Preference number: 5 (lower is better)
Translates to: EHVHSIPYNVSVIVH*LIHSEATMLDLCKP
Trigger: AGGCTTACATAAATCGAGCATCGTTGCTTCAGAATGAATCAACCAATGAACAATTACAGATACATTATAAGGTATGCTATGCACGTGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000509317.5
ENST00000511653.1
CDS CCA 90 bp CATTTATATGAACTATCCAGACTAGGTAAATCCAGAGACAGAAGATaGATTGGTGGTTGCCAGAAGTTTCAAAATGAACTATTCCATCAA +
Preference number: 5 (lower is better)
Translates to: HLYELSRLGKSRDRR*IGGCQKFQNELFHQ
Trigger: TTGATGGAATAGTTCATTTTGAAACTTCTGGCAACCACCAATCCATCTTCTGTCTCTGGATTTACCTAGTCTGGATAGTTCATATAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS-3UTR CAA 90 bp ACGGAATCCAGCATAAAAGGGATTGAAATGTATAAGGTCATGATGCAAATGCTTGTAATTGTTCATTGGTaGATTCATTCTGAAGCAACG +
Preference number: 5 (lower is better)
Translates to: TESSIKGIEMYKVMMQMLVIVHW*IHSEAT
Trigger: CGTTGCTTCAGAATGAATCAACCAATGAACAATTAC...AAGCATTTGCATCATGACCTTATACATTTCAATCCCTTTTATGCTGGATTCCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp ATGCTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAGAGCTCATTGTACCTTaGTGCAGCTTCAATGAATTT +
Preference number: 5 (lower is better)
Translates to: MLVLPALIMSSLNGIQHKELIVP*CSFNEF
Trigger: AAATTCATTGAAGCTGCACAAAGGTACAATGAGCTC...TTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp CTTGTACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGGAGCAAATTCTTGAAGTaGATTTCCTCTGATGATCCT +
Preference number: 5 (lower is better)
Translates to: LVLPALIMSSLNGIQHKRSKFLK*ISSDDP
Trigger: AGGATCATCAGAGGAAATCAACTTCAAGAATTTGCT...CCTTTTATGCTGGATTCCGTTTAAAGAAGACATTATTAGAGCAGGAAGTACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS-3UTR CAA 90 bp ACGGAATCCAGCATAAAAGGGATTGAAATGTATAAGGTCATGATGCAAATGCTTAGCAAATTCTTGAAGTaGATTTCCTCTGATGATCCT +
Preference number: 5 (lower is better)
Translates to: TESSIKGIEMYKVMMQMLSKFLK*ISSDDP
Trigger: AGGATCATCAGAGGAAATCAACTTCAAGAATTTGCT...AAGCATTTGCATCATGACCTTATACATTTCAATCCCTTTTATGCTGGATTCCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS CCA 72 bp AGAGGGAACCTGAGATGCTACAGAGTAGCGTCTGTGTaGGCCAGAGCGTCGGGTGTGGGAGCCTGGGCTAGC +
Preference number: 6 (lower is better)
Translates to: RGNLRCYRVASV*ARASGVGAWAS
Trigger: GCTAGCCCAGGCTCCCACACCCGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS GCA 72 bp CGAATTCATGAGCTGGGCCAAATCCTGTCGCACGGCTaGCGCCATCTTTCTCCCAGCTCAGCGGTGGATGCG +
Preference number: 6 (lower is better)
Translates to: RIHELGQILSHG*RHLSPSSAVDA
Trigger: CGCATCCACCGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000509093.5
ENST00000509317.5
ENST00000510801.5
ENST00000511891.5
CDS GCA 72 bp GTGGTCCTCCAGAGTGCAGCCAGAGGGAACCTGAGATaGTACAGAGTAGCGTCTGTGTGGGCCAGAGCGTCG +
Preference number: 6 (lower is better)
Translates to: VVLQSAARGNLR*YRVASVWARAS
Trigger: CGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS CCA 72 bp AAGAGAGGCCAGATTCGGTGTGAGGCCGGCCAGCGATaGGAAGAGGTACCAGGGAAGGCTACTAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: KRGQIRCEAGQR*EEVPGKATKAR
Trigger: CCTGGCCTTAGTAGCCTTCCCTGGTACCTCTTCCCATCGCTGGCCGGCCTCACACCGAATCTGGCCTCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511708.1
CDS TCA 72 bp AGAGGAGGAAGGTCCAAAGAGAGGCCAGATTCGGTGTaGGGCCGGCCAGCGATGGGAAGAGGTACCAGGGAA +
Preference number: 6 (lower is better)
Translates to: RGGRSKERPDSV*GRPAMGRGTRE
Trigger: TTCCCTGGTACCTCTTCCCATCGCTGGCCGGCCTCACACCGAATCTGGCCTCTCTTTGGACCTTCCTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511708.1
CDS TCA 72 bp TGCCAGCCAGATCTTTATGAGAGCCGCTCGAATTCATaGGCTGGGCCAAATCCTGTCGCACGGCTGCCGCCA +
Preference number: 6 (lower is better)
Translates to: CQPDLYESRSNS*AGPNPVARLPP
Trigger: TGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000506443.5
ENST00000507376.1
ENST00000509093.5
ENST00000509317.5
ENST00000510801.5
ENST00000511653.1
ENST00000511891.5
CDS CCA 72 bp ACCCGAAACACAAGGACCCACAGAAGACAGTCTGAATaGTCTGGACGACATGACAGCGGCCATACCGCCTCA +
Preference number: 6 (lower is better)
Translates to: TRNTRTHRRQSE*SGRHDSGHTAS
Trigger: TGAGGCGGTATGGCCGCTGTCATGTCGTCCAGACCATTCAGACTGTCTTCTGTGGGTCCTTGTGTTTCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511708.1
CDS CAA 72 bp CTTGGAAACAAAGTGATTGGATCTGCTTATCCCACGTaGGCAGGGCTTCTCGTGCTTAGCTGCAGGGATCTC +
Preference number: 6 (lower is better)
Translates to: LGNKVIGSAYPT*AGLLVLSCRDL
Trigger: GAGATCCCTGCAGCTAAGCACGAGAAGCCCTGCCAACGTGGGATAAGCAGATCCAATCACTTTGTTTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS GCA 72 bp CATCCTGACCCACGATATGAGCACATTCCGCCTATGTaGCATCAGAGTTGGTGGCAGAGAAAATACCCGAAA +
Preference number: 6 (lower is better)
Translates to: HPDPRYEHIPPM*HQSWWQRKYPK
Trigger: TTTCGGGTATTTTCTCTGCCACCAACTCTGATGGCACATAGGCGGAATGTGCTCATATCGTGGGTCAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511708.1
CDS CCA 72 bp GACTGCGTTTTCGCAAAGTTCCGTTTCTCACGTCTGTaGTTTACCGTCCTTCGATCTTTCAGGCAGCGCTTA +
Preference number: 6 (lower is better)
Translates to: DCVFAKFRFSRL*FTVLRSFRQRL
Trigger: TAAGCGCTGCCTGAAAGATCGAAGGACGGTAAACCACAGACGTGAGAAACGGAACTTTGCGAAAACGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509093.5
CDS GCA 72 bp GAACGCTGCTGCCCTGCTGATGCTAAGATCGTACAGTaGAAAGCATGTTTTAAGGCCTCTAGTCTTTCACTT +
Preference number: 6 (lower is better)
Translates to: ERCCPADAKIVQ*KACFKASSLSL
Trigger: AAGTGAAAGACTAGAGGCCTTAAAACATGCTTTGCACTGTACGATCTTAGCATCAGCAGGGCAGCAGCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000509317.5
ENST00000511653.1
CDS GCA 72 bp AAAAGGTTATTCACTTGGAAACAAAGTGATTGGATCTaGTTATCCCACGTTGGCAGGGCTTCTCGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: KRLFTWKQSDWI*LSHVGRASRAA
Trigger: GGCAGCACGAGAAGCCCTGCCAACGTGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTGAATAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS TCA 72 bp AAAAATCAGTCAGCAACTGCCGCGAGATCACGAGACTaGCATTCTCATTTACCATTGCCAGCCAGATCTTTA +
Preference number: 6 (lower is better)
Translates to: KNQSATAARSRD*HSHLPLPARSL
Trigger: TAAAGATCTGGCTGGCAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510801.5
CDS CCA 72 bp TTCTCCAAAAGGTTATTCACTTGGAAACAAAGTGATTaGATCTGCTTATCCCACGTTGGCAGGGCTTCTCGT +
Preference number: 6 (lower is better)
Translates to: FSKRLFTWKQSD*ICLSHVGRASR
Trigger: ACGAGAAGCCCTGCCAACGTGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTGAATAACCTTTTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000509317.5
ENST00000511653.1
CDS GCA 72 bp AAAAGGTTATTCACTTGGAAACAAAGTGATTGGATCTaGTTATCCCACGTTGGCAGGGCTTCTCGTGTTTCA +
Preference number: 6 (lower is better)
Translates to: KRLFTWKQSDWI*LSHVGRASRVS
Trigger: TGAAACACGAGAAGCCCTGCCAACGTGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTGAATAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509317.5
CDS CAA 72 bp CTTGGAAACAAAGTGATTGGATCTGCTTATCCCACGTaGGCAGGGCTTCTCGTGTTTCAAAATGAACTATTC +
Preference number: 6 (lower is better)
Translates to: LGNKVIGSAYPT*AGLLVFQNELF
Trigger: GAATAGTTCATTTTGAAACACGAGAAGCCCTGCCAACGTGGGATAAGCAGATCCAATCACTTTGTTTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509317.5
CDS TCA 72 bp AATTTTCTCCAAAAGGTTATTCACTTGGAAACAAAGTaGTTGGATCTGCTTATCCCACGTTGGCAGGGCTTC +
Preference number: 6 (lower is better)
Translates to: NFLQKVIHLETK*LDLLIPRWQGF
Trigger: GAAGCCCTGCCAACGTGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTGAATAACCTTTTGGAGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000511653.1
CDS CAA 72 bp GTTTTAAGGCCTCTAGTCTTTCACTTTCGTGGACTATaGTCTTGTAAGAGAGCTCATTGTACCTTTGTGCAG +
Preference number: 6 (lower is better)
Translates to: VLRPLVFHFRGL*SCKRAHCTFVQ
Trigger: CTGCACAAAGGTACAATGAGCTCTCTTACAAGACAATAGTCCACGAAAGTGAAAGACTAGAGGCCTTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000509317.5
ENST00000511653.1
CDS CAA 72 bp GTCAATAAATCCATTCATACGTCCTTCGGTTATCATTaGAGATGCTATCTTTTCCGCCTTAGCTGCAGGGAT +
Preference number: 6 (lower is better)
Translates to: VNKSIHTSFGYH*RCYLFRLSCRD
Trigger: ATCCCTGCAGCTAAGGCGGAAAAGATAGCATCTCAAATGATAACCGAAGGACGTATGAATGGATTTATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000504274.1
ENST00000509317.5
ENST00000511653.1
CDS CCA 72 bp TTTTGTCCTGTTTCCAAAGGAATTCCCACCAACACTTaGGCTGCATTTCTCCAATCTTCTTCTTTCTCATAT +
Preference number: 6 (lower is better)
Translates to: FCPVSKGIPTNT*AAFLQSSSFSY
Trigger: ATATGAGAAAGAAGAAGATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATTCCTTTGGAAACAGGACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000506443.5
ENST00000509093.5
ENST00000510801.5
ENST00000511653.1
CDS CCA 72 bp GAACTATCCAGACTAGGTAAATCCAGAGACAGAAGATaGATTGGTGGTTGCCAGAAGTTTCAAAATGAACTA +
Preference number: 6 (lower is better)
Translates to: ELSRLGKSRDRR*IGGCQKFQNEL
Trigger: TAGTTCATTTTGAAACTTCTGGCAACCACCAATCCATCTTCTGTCTCTGGATTTACCTAGTCTGGATAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS GCA 72 bp CTAGGTAAATCCAGAGACAGAAGATGGATTGGTGGTTaGCAGAAGTTTCAAAATGAACTATTCCATCAATCT +
Preference number: 6 (lower is better)
Translates to: LGKSRDRRWIGG*QKFQNELFHQS
Trigger: AGATTGATGGAATAGTTCATTTTGAAACTTCTGGCAACCACCAATCCATCTTCTGTCTCTGGATTTACCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS CAA 90 bp CACGTGCATAGCATACCTTATAATGTATCTGTAATTGTTCATTGGTaGATTCATTCTGAAGCAACGATGCTCGATTTATGTAAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: HVHSIPYNVSVIVHW*IHSEATMLDLCKPL
Trigger: CAGAGGCTTACATAAATCGAGCATCGTTGCTTCAGAATGAATCAACCAATGAACAATTACAGATACATTATAAGGTATGCTATGCACGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000509317.5
ENST00000511653.1
CDS CAA 90 bp TTCACTTTCGTGGACTATTGTCTTGTAAGAGAGCTCATTGTACCTTaGTGCAGCTTCAATGAATTTTCTTCTATAATCAAGAACACGTGC +
Preference number: 6 (lower is better)
Translates to: FTFVDYCLVRELIVP*CSFNEFSSIIKNTC
Trigger: GCACGTGTTCTTGATTATAGAAGAAAATTCATTGAAGCTGCACAAAGGTACAATGAGCTCTCTTACAAGACAATAGTCCACGAAAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000509317.5
ENST00000511653.1
CDS TCA 72 bp CAGAAGATGGATTGGTGGTTGCCAGAAGTTTCAAAATaGACTATTCCATCAATCTGGTCAATAAATCCATTC +
Preference number: 6 (lower is better)
Translates to: QKMDWWLPEVSK*TIPSIWSINPF
Trigger: GAATGGATTTATTGACCAGATTGATGGAATAGTTCATTTTGAAACTTCTGGCAACCACCAATCCATCTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511653.1
CDS CAA 72 bp GTGGACTATTGTCTTGTAAGAGAGCTCATTGTACCTTaGTGCAGCTTCAATGAATTTTCTTCTATAATCAAG +
Preference number: 6 (lower is better)
Translates to: VDYCLVRELIVP*CSFNEFSSIIK
Trigger: CTTGATTATAGAAGAAAATTCATTGAAGCTGCACAAAGGTACAATGAGCTCTCTTACAAGACAATAGTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264389.7
ENST00000503682.5
ENST00000509093.5
ENST00000509317.5
ENST00000511653.1