Pregenerated sensors for COPS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000166200Ensembl transcript IDs: ENST00000299259.10, ENST00000388901.10, ENST00000542928.5, ENST00000558545.1, ENST00000558843.5, ENST00000559016.1, ENST00000560240.5, ENST00000561248.1
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGGCTTTAGAGGGGAAGTTCTTCCTTGCCTTTCTCCTACCTTCTaGTGTTTCTTGGCTCTTGGTTTCTTGGCTTATGGCAGCAAAACT | + |
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Preference number: 1 (lower is better) Translates to: EGFRGEVLPCLSPTF*CFLALGFLAYGSKT Trigger: AGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAAGGAAGAACTTCCCCTCTAAAGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR CCA 90 bp | AGTTCTTCCTTGCCTTTCTCCTACCTTCTGGTGTTTCTTGGCTCTTaGTTTCTTGGCTTATGGCAGCAAAACTCCAATCTCTGGTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: SSSLPFSYLLVFLGS*FLGLWQQNSNLWFC Trigger: ACAGAACCAGAGATTGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAAGGAAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR GCA 90 bp | GTTATATTTTCTTTCTTTGAAGGCTTTAGAGGGGAAGTTCTTCCTTaGCTTTCTCCTACCTTCTGGTGTTTCTTGGCTCTTGGTTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: VIFSFFEGFRGEVLP*LSPTFWCFLALGFL Trigger: CAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAAGGAAGAACTTCCCCTCTAAAGCCTTCAAAGAAAGAAAATATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR-3UTR TCA 90 bp | ATCAAGGTGCTGGCAGGGTTATATTTTCTTTCTTTGAAGGCTTTAGAGGGGAAGGGCAGGAGAATCGCTTaGACCCGGGAGGCGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: IKVLAGLYFLSLKALEGKGRRIA*TREAEA Trigger: AGCCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCC...CTTCCCCTCTAAAGCCTTCAAAGAAAGAAAATATAACCCTGCCAGCACCTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR CAA 90 bp | AAGTTCTTCCTTGCCTTTCTCCTACCTTCTGGTGTTTCTTGGCTCTaGGTTTCTTGGCTTATGGCAGCAAAACTCCAATCTCTGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KFFLAFLLPSGVSWL*VSWLMAAKLQSLVL Trigger: CAGAACCAGAGATTGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAAGGAAGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR CAA 90 bp | CAGAAGTCTGAAATCAAGGTGCTGGCAGGGTTATATTTTCTTTCTTaGAAGGCTTTAGAGGGGAAGTTCTTCCTTGCCTTTCTCCTACCT | + |
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Preference number: 2 (lower is better) Translates to: QKSEIKVLAGLYFLS*KALEGKFFLAFLLP Trigger: AGGTAGGAGAAAGGCAAGGAAGAACTTCCCCTCTAAAGCCTTCAAAGAAAGAAAATATAACCCTGCCAGCACCTTGATTTCAGACTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR-3UTR CCA 90 bp | AATCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGAAACTCAGCAGGTTTTaGGCAATGGTAGATTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NPALVVESIYLWQPKISLKLSRF*AMVDCW Trigger: CCAGCAATCTACCATTGCCCAAAACCTGCTGAGTTT...CAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTCTACAATTTCTGAGCTaGACTGTTTATTTTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SGRCTIVQSKDSTGELGTLQFLS*TVYFAA Trigger: AGCAGCAAAATAAACAGTGCAGCTCAGAAATTGTAG...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAATCAAGGTGCTGGCAGGGTTATATTTTCTTTCTTTGAAGGCTTTAGAGTGGCTCTTGGTTTCTTaGCTTATGGCAGCAAAACTC | + |
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Preference number: 2 (lower is better) Translates to: SEIKVLAGLYFLSLKALEWLLVS*LMAAKL Trigger: GAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCA...CTCTAAAGCCTTCAAAGAAAGAAAATATAACCCTGCCAGCACCTTGATTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAATCAAGGTGCTGGCAGGGTTATATTTTCTTTCTTTGAAGGCTTTAGAGGTGTTTCTTGGCTCTTaGTTTCTTGGCTTATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SEIKVLAGLYFLSLKALEVFLGS*FLGLWQ Trigger: CTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACAC...CTCTAAAGCCTTCAAAGAAAGAAAATATAACCCTGCCAGCACCTTGATTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTACATCTCTGCACTGTTaGCTTAAGGACGTCTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSTSLHC*LKDVCK Trigger: TTTACAGACGTCCTTAAGGCAACAGTGCAGAGATGT...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGCATACCTCAAAGTTAGGTaGAAGTTTTGGAAACTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SSSCSREHLLVAAKDFFAYLKVR*KFWKLS Trigger: TGAAAGTTTCCAAAACTTCCACCTAACTTTGAGGTA...TGCAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR CCA 90 bp | AATCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGGGGCACTGTAAGAATTaGAGGATAAAGGTTAAATCA | + |
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Preference number: 2 (lower is better) Translates to: NPALVVESIYLWQPKISLGHCKN*RIKVKS Trigger: TGATTTAACCTTTATCCTCCAATTCTTACAGTGCCC...CAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR TCA 90 bp | CTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGTTTATTTTGCTGCTTaGAACCTAAGTGACAGTATG | + |
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Preference number: 2 (lower is better) Translates to: LESGRCTIVQSKDSTGELVYFAA*NLSDSM Trigger: CATACTGTCACTTAGGTTTCAAGCAGCAAAATAAAC...CAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR GCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTACATCTCTGCACTGTTaGCTTAAGGACGTCTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: CTFRARCQYSINPMVFWFTSLHC*LKDVCK Trigger: TTTACAGACGTCCTTAAGGCAACAGTGCAGAGATGT...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
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| 3UTR-3UTR TCA 90 bp | AATAATCTCGAGTTAAAGAGAACCTCCAATTTGTCTTCGTTACGAAATTTCTGCTTTTGCGTCACATTCTaGAACCTGATACTCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: NNLELKRTSNLSSLRNFCFCVTF*NLILHL Trigger: GAGATGGAGTATCAGGTTTCAGAATGTGACGCAAAA...GCAGAAATTTCGTAACGAAGACAAATTGGAGGTTCTCTTTAACTCGAGATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR TCA 90 bp | CATTTAGCTGTCTATGTTCTGGCATATTCGTTTAAAGTGAACATTCTGAGAGTTCATGACAAATTACTATaGTGTTGTACGTTTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: HLAVYVLAYSFKVNILRVHDKLL*CCTFRA Trigger: TGCCCTAAACGTACAACATCATAGTAATTTGTCATG...AACTCTCAGAATGTTCACTTTAAACGAATATGCCAGAACATAGACAGCTAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR TCA 90 bp | AATAATCTCGAGTTAAAGAGAACCTCCAATTTGTCTTCGTTACGAAATTTCTGCCCAAACTACAATTTCTaGGCTGCACTGTTTATTTTG | + |
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Preference number: 2 (lower is better) Translates to: NNLELKRTSNLSSLRNFCPNYNF*AALFIL Trigger: CAAAATAAACAGTGCAGCTCAGAAATTGTAGTTTGG...GCAGAAATTTCGTAACGAAGACAAATTGGAGGTTCTCTTTAACTCGAGATTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTCATAAATCCCATATGAAGAATGAAACTCCCAGCTTTACTTGTGTATGCAAACCTTTACTACACTaGAGGTACAGAAATATACGG | + |
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Preference number: 2 (lower is better) Translates to: FSHKSHMKNETPSFTCVCKPLLH*RYRNIR Trigger: CCGTATATTTCTGTACCTGCAGTGTAGTAAAGGTTT...GCATACACAAGTAAAGCTGGGAGTTTCATTCTTCATATGGGATTTATGACTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAAACTCAATACATTCAAATGAGCTGAGTTCCTTTAAGGTAGTTACCTTGTTGGAAACTTTCATTTaGTGCCAAGTAATGGTAACT | + |
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Preference number: 2 (lower is better) Translates to: IQNSIHSNELSSFKVVTLLETFI*CQVMVT Trigger: AGTTACCATTACTTGGCACCAAATGAAAGTTTCCAA...CAAGGTAACTACCTTAAAGGAACTCAGCTCATTTGAATGTATTGAGTTTTGGAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR CCA 72 bp | CTCCTACCTTCTGGTGTTTCTTGGCTCTTGGTTTCTTaGCTTATGGCAGCAAAACTCCAATCTCTGGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LLPSGVSWLLVS*LMAAKLQSLVL Trigger: CAGAACCAGAGATTGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR CCA 72 bp | TTGCCTTTCTCCTACCTTCTGGTGTTTCTTGGCTCTTaGTTTCTTGGCTTATGGCAGCAAAACTCCAATCTC | + |
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Preference number: 3 (lower is better) Translates to: LPFSYLLVFLGS*FLGLWQQNSNL Trigger: GAGATTGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR GCA 72 bp | TCTTTCTTTGAAGGCTTTAGAGGGGAAGTTCTTCCTTaGCTTTCTCCTACCTTCTGGTGTTTCTTGGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: SFFEGFRGEVLP*LSPTFWCFLAL Trigger: AAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAAGGAAGAACTTCCCCTCTAAAGCCTTCAAAGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR-3UTR CAA 90 bp | CTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGCAACCGACAGTAGTTTaGCCATTCCCAGTTCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: LESGRCTIVQSKDSTGELQPTVV*PFPVLL Trigger: TAAAAGAACTGGGAATGGCAAAACTACTGTCGGTTG...CAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR-3UTR CAA 90 bp | AATCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGAAAACTCTTTTGGGATaGCCTTCAAAGCCAGTTATA | + |
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Preference number: 3 (lower is better) Translates to: NPALVVESIYLWQPKISLKTLLG*PSKPVI Trigger: TATAACTGGCTTTGAAGGCAATCCCAAAAGAGTTTT...CAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| 3UTR TCA 72 bp | GAAATTTATTCTCTCACAGTTCTGGAGCCAGAAGTCTaGAATCAAGGTGCTGGCAGGGTTATATTTTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: EIYSLTVLEPEV*NQGAGRVIFSF Trigger: GAAAGAAAATATAACCCTGCCAGCACCTTGATTTCAGACTTCTGGCTCCAGAACTGTGAGAGAATAAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR-3UTR CAA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTCAACCGACAGTAGTTTaGCCATTCCCAGTTCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: CTFRARCQYSINPMVFWFQPTVV*PFPVLL Trigger: TAAAAGAACTGGGAATGGCAAAACTACTGTCGGTTG...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
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| CDS-3UTR TCA 90 bp | TTGCCTTTCTCCTACCTTCTGGTGTTTCTTGGCTCTTGGTTTCTTGGCTTATGGCTGGAGCCAGAAGTCTaGAATCAAGGTGCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPFSYLLVFLGSWFLGLWLEPEV*NQGAGR Trigger: CCTGCCAGCACCTTGATTTCAGACTTCTGGCTCCAG...CCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| CDS-3UTR TCA 90 bp | GTGCATGCTTTCTCTCTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATGGCAGGAGAATCGCTTaGACCCGGGAGGTGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VHAFSLESGRCTIVQSKDGRRIA*TREVEV Trigger: CACCTCCACCTCCCGGGTTCAAGCGATTCTCCTGCC...ATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAGAGAGAAAGCATGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| CDS-3UTR CCA 90 bp | TCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGCAGTAATCCCAGCACTATaGGAGGCCAAAGCGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SSSCSREHLLVAAKDFFAVIPAL*EAKAVD Trigger: ATCCACCGCTTTGGCCTCCCATAGTGCTGGGATTAC...TGCAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| CDS-3UTR TCA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTCGGCTTGGCCTCCTGTaGGTCAAATGGATTTATTCC | + |
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Preference number: 4 (lower is better) Translates to: SGRCTIVQSKDSTGELGTRLGLL*VKWIYS Trigger: GGAATAAATCCATTTGACTCACAGGAGGCCAAGCCG...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| CDS-3UTR GCA 90 bp | TTCTTGGCTCTTGGTTTCTTGGCTTATGGCAGCAAAACTCCAATCTCTGGTTCTGGGGAAGTTCTTCCTTaGCTTTCTCCTACCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FLALGFLAYGSKTPISGSGEVLP*LSPTFW Trigger: CCAGAAGGTAGGAGAAAGGCAAGGAAGAACTTCCCC...AGAACCAGAGATTGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| CDS-3UTR CCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTCCATGTCAGACATCTTaGCCGGGAGGGGGAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSPCQTS*PGGGGE Trigger: TTCTCCTCCCCCTCCCGGCCAAGATGTCTGACATGG...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000542928.5 |
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| CDS-3UTR TCA 90 bp | TCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGCAGAGGGATGGCAGACTTaGTGTGAAGTGACTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SSSCSREHLLVAAKDFFAEGWQT*CEVTVH Trigger: ATGAACAGTCACTTCACATCAAGTCTGCCATCCCTC...TGCAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| CDS-3UTR CCA 90 bp | CTGGTGTTTCTTGGCTCTTGGTTTCTTGGCTTATGGCAGCAAAACTCCAATCTCGTGTTTCTTGGCTCTTaGTTTCTTGGCTTATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LVFLGSWFLGLWQQNSNLVFLGS*FLGLWQ Trigger: CTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACAC...GAGATTGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| CDS-3UTR CCA 90 bp | CCTTCTGGTGTTTCTTGGCTCTTGGTTTCTTGGCTTATGGCAGCAAAACTCCAACCTTCTGGTGTTTCTTaGCTCTTGGTTTCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: PSGVSWLLVSWLMAAKLQPSGVS*LLVSWL Trigger: AAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGG...TTGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| CDS-3UTR CCA 90 bp | TTTCTCCTACCTTCTGGTGTTTCTTGGCTCTTGGTTTCTTGGCTTATGGCAGCACTTTCTCCTACCTTCTaGTGTTTCTTGGCTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: FLLPSGVSWLLVSWLMAALSPTF*CFLALG Trigger: ACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAG...TGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR CAA 72 bp | TCTCCTACCTTCTGGTGTTTCTTGGCTCTTGGTTTCTaGGCTTATGGCAGCAAAACTCCAATCTCTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SPTFWCFLALGF*AYGSKTPISGS Trigger: AGAACCAGAGATTGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| 3UTR CAA 72 bp | GTTCTTCCTTGCCTTTCTCCTACCTTCTGGTGTTTCTaGGCTCTTGGTTTCTTGGCTTATGGCAGCAAAACT | + |
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Preference number: 4 (lower is better) Translates to: VLPCLSPTFWCF*ALGFLAYGSKT Trigger: AGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAAGGAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| CDS-3UTR TCA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCCCCATAATCAGTGGATaGGGGATGGCAGACTTGATG | + |
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Preference number: 4 (lower is better) Translates to: FCHNSNNFQDTSTDSSFAPIISG*GMADLM Trigger: CATCAAGTCTGCCATCCCTCATCCACTGATTATGGG...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
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| CDS-3UTR CCA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACACCATGTCAGACATCTTaGCCGGGAGGGGGAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LYYTAGTEIYGHIFRELTPCQTS*PGGGGE Trigger: TTCTCCTCCCCCTCCCGGCCAAGATGTCTGACATGG...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000299259.10 |
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| CDS-3UTR CCA 90 bp | GTTTCTTGGCTCTTGGTTTCTTGGCTTATGGCAGCAAAACTCCAATCTCTGGTTTGGCTCTTGGTTTCTTaGCTTATGGCAGCAAAACTC | + |
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Preference number: 4 (lower is better) Translates to: VSWLLVSWLMAAKLQSLVWLLVS*LMAAKL Trigger: GAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCA...AACCAGAGATTGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| CDS-3UTR CCA 90 bp | ACCTTCTGGTGTTTCTTGGCTCTTGGTTTCTTGGCTTATGGCAGCAAAACTCCAATTCTCTCACAGTTCTaGAGCCAGAAGTCTGAAATC | + |
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Preference number: 4 (lower is better) Translates to: TFWCFLALGFLAYGSKTPILSQF*SQKSEI Trigger: GATTTCAGACTTCTGGCTCCAGAACTGTGAGAGAAT...TGGAGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
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| CDS-3UTR TCA 90 bp | CTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGCCTCATCATCGCACATaGAATCATCCTCCATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LESGRCTIVQSKDSTGELPHHRT*NHPPCQ Trigger: CTGACATGGAGGATGATTTCATGTGCGATGATGAGG...CAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| CDS-3UTR TCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATCCTCATCATCGCACATaGAATCATCCTCCATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDPHHRT*NHPPCQ Trigger: CTGACATGGAGGATGATTTCATGTGCGATGATGAGG...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
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| CDS-3UTR TCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATGAGGGATGGCAGACTTaGTGTGAAGTGACTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDEGWQT*CEVTVH Trigger: ATGAACAGTCACTTCACATCAAGTCTGCCATCCCTC...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
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| CDS-3UTR TCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTCCCATAATCAGTGGATaGGGGATGGCAGACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSPIISG*GMADLM Trigger: CATCAAGTCTGCCATCCCTCATCCACTGATTATGGG...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTCGGCTTGGCCTCCTGTaGGTCAAATGGATTTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSRLGLL*VKWIYS Trigger: GGAATAAATCCATTTGACTCACAGGAGGCCAAGCCG...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGCATTTTGCGTCACATTCTaGAACCTGATACTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSCSREHLLVAAKDFFAFCVTF*NLILHL Trigger: GAGATGGAGTATCAGGTTTCAGAATGTGACGCAAAA...TGCAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTAGGGGGAGGAGAAATTaGAGACAACCTCCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CTFRARCQYSINPMVFWFRGRRN*RQPPPT Trigger: TGTGGGAGGAGGTTGTCTCCAATTTCTCCTCCCCCT...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299259.10 |
||
| CDS-3UTR CCA 90 bp | AATCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGAACTCCCATAATCAGTaGATGAGGGATGGCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: NPALVVESIYLWQPKISLNSHNQ*MRDGRL Trigger: AAGTCTGCCATCCCTCATCCACTGATTATGGGAGTT...CAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTCCTCATCATCGCACATaGAATCATCCTCCATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSPHHRT*NHPPCQ Trigger: CTGACATGGAGGATGATTTCATGTGCGATGATGAGG...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTCAGAATAATTTCTTGTaGCTGCACTCCGAATATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGRCTIVQSKDSTGELGTQNNFL*LHSEYR Trigger: CCTATATTCGGAGTGCAGTCACAAGAAATTATTCTG...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTGAGGGATGGCAGACTTaGTGTGAAGTGACTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSEGWQT*CEVTVH Trigger: ATGAACAGTCACTTCACATCAAGTCTGCCATCCCTC...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATGTTCAAGGAGTTGGTTaGCTTGATCAATTCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDVQGVG*LDQFGH Trigger: ATGGCCGAATTGATCAAGTCAACCAACTCCTTGAAC...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCTTATCCAATATGCACTaGACCAGCAAGCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FCHNSNNFQDTSTDSSFALSNMH*TSKLST Trigger: TGTGGAGAGCTTGCTGGTGCAGTGCATATTGGATAA...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CCA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTCCTTTAAAACTCTTTTaGGATTGCCTTCAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGRCTIVQSKDSTGELGTPLKLF*DCLQSQ Trigger: CTGGCTTTGAAGGCAATCCCAAAAGAGTTTTAAAGG...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTTCAGTCTGGCACGACTaGTGTAACTGGCGTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSSVWHD*CNWRKI Trigger: AATTTTACGCCAGTTACATCAGTCGTGCCAGACTGA...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACACCCATAATCAGTGGATaGGGGATGGCAGACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LYYTAGTEIYGHIFRELTPIISG*GMADLM Trigger: CATCAAGTCTGCCATCCCTCATCCACTGATTATGGG...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACACGGCTTGGCCTCCTGTaGGTCAAATGGATTTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYYTAGTEIYGHIFRELTRLGLL*VKWIYS Trigger: GGAATAAATCCATTTGACTCACAGGAGGCCAAGCCG...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTGTTCAAGGAGTTGGTTaGCTTGATCAATTCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSVQGVG*LDQFGH Trigger: ATGGCCGAATTGATCAAGTCAACCAACTCCTTGAAC...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR GCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATTCACCTTCCCTCAAGTaGATTTTACCACCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDSPSLK*ILPPHS Trigger: AGAATGTGGTGGTAAAATGCACTTGAGGGAAGGTGA...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTTTATCCAATATGCACTaGACCAGCAAGCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSLSNMH*TSKLST Trigger: TGTGGAGAGCTTGCTGGTGCAGTGCATATTGGATAA...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR GCA 90 bp | GTGCATGCTTTCTCTCTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATTTATCCAATATGCACTaGACCAGCAAGCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VHAFSLESGRCTIVQSKDLSNMH*TSKLST Trigger: TGTGGAGAGCTTGCTGGTGCAGTGCATATTGGATAA...ATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAGAGAGAAAGCATGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCACATCTCTGCACTGTTaGCTTAAGGACGTCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCHNSNNFQDTSTDSSFATSLHC*LKDVCK Trigger: TTTACAGACGTCCTTAAGGCAACAGTGCAGAGATGT...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTAGCTTTACTTGTGTATaGTCAAGCCTCACTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGRCTIVQSKDSTGELGTSFTCV*SSLTSK Trigger: TTTTGAAGTGAGGCTTGAGCATACACAAGTAAAGCT...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCAACACGGAACAAAGTTaGCCCCGAATAGTAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FCHNSNNFQDTSTDSSFANTEQS*PRIVST Trigger: AGTACTTACTATTCGGGGGCAACTTTGTTCCGTGTT...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAACTCCCATAATCAGTaGATGAGGGATGGCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSNSHNQ*MRDGRL Trigger: AAGTCTGCCATCCCTCATCCACTGATTATGGGAGTT...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCGCAAGTGGTTCGTCTTaGACTTCCAGATTCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: FCHNSNNFQDTSTDSSFAASGSS*TSRFII Trigger: TATGATGAATCTGGAAGTCCAAGACGAACCACTTGC...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CCA 90 bp | CTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGCAAGTGGTTCGTCTTaGACTTCCAGATTCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: LESGRCTIVQSKDSTGELASGSS*TSRFII Trigger: TATGATGAATCTGGAAGTCCAAGACGAACCACTTGC...CAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATGCAAGTGGTTCGTCTTaGACTTCCAGATTCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDASGSS*TSRFII Trigger: TATGATGAATCTGGAAGTCCAAGACGAACCACTTGC...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAAACTCAGCAGGTTTTaGGCAATGGTAGATTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSKLSRF*AMVDCW Trigger: CCAGCAATCTACCATTGCCCAAAACCTGCTGAGTTT...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTGGGCACTGTAAGAATTaGAGGATAAAGGTTAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SGRCTIVQSKDSTGELGTGHCKN*RIKVKS Trigger: TGATTTAACCTTTATCCTCCAATTCTTACAGTGCCC...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | ATCCAAAACTCAATACATTCAAATGAGCTGAGTTCCTTTAAGGTAGTTACCTTGAACACAAAAATTAGCTaGGCGTGGTGGCGGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQNSIHSNELSSFKVVTLNTKIS*AWWRVS Trigger: AGACACCCGCCACCACGCCCAGCTAATTTTTGTGTT...CAAGGTAACTACCTTAAAGGAACTCAGCTCATTTGAATGTATTGAGTTTTGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | AACAGAAATTTATTCTCTCACAGTTCTGGAGCCAGAAGTCTGAAATCAAGGTGCTGGTTTCTTGGCTTATaGCAGCAAAACTCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRNLFSHSSGARSLKSRCWFLGL*QQNSNL Trigger: GAGATTGGAGTTTTGCTGCCATAAGCCAAGAAACCA...GCACCTTGATTTCAGACTTCTGGCTCCAGAACTGTGAGAGAATAAATTTCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
||
| CDS-3UTR TCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATCAGAATAATTTCTTGTaGCTGCACTCCGAATATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDQNNFL*LHSEYR Trigger: CCTATATTCGGAGTGCAGTCACAAGAAATTATTCTG...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATAGACTTGATGTGAAGTaGCTGTTCATAGAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDRLDVK*LFIECF Trigger: AAAGCACTCTATGAACAGTCACTTCACATCAAGTCT...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | AATCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGGAACACATTACAATATaGTGTAAACCACTGGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: NPALVVESIYLWQPKISLEHITI*CKPLVW Trigger: CCATACCAGTGGTTTACATCATATTGTAATGTGTTC...CAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATATCCCATATGAAGAATaGAACTCCCAGCTTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDIPYEE*NSQLYL Trigger: CAAGTAAAGCTGGGAGTTTCATTCTTCATATGGGAT...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | TTTAGTCATAAATCCCATATGAAGAATGAAACTCCCAGCTTTACTTGTGTATGCGGACAGTCTTCCACATaGAACCTAGTCATAACACGC | + |
|
Preference number: 4 (lower is better) Translates to: FSHKSHMKNETPSFTCVCGQSST*NLVITR Trigger: GCGTGTTATGACTAGGTTTCATGTGGAAGACTGTCC...GCATACACAAGTAAAGCTGGGAGTTTCATTCTTCATATGGGATTTATGACTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATAAACCTTTTGGAAACTaGTTAATGCCGCTTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDKPFGN*LMPLLG Trigger: ACCCAAAAGCGGCATTAAGCAGTTTCCAAAAGGTTT...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | CTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGAAACCTTTTGGAAACTaGTTAATGCCGCTTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LESGRCTIVQSKDSTGELKPFGN*LMPLLG Trigger: ACCCAAAAGCGGCATTAAGCAGTTTCCAAAAGGTTT...CAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTTCACCTTCCCTCAAGTaGATTTTACCACCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSSPSLK*ILPPHS Trigger: AGAATGTGGTGGTAAAATGCACTTGAGGGAAGGTGA...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTCTAGAAAGTGGAAGATaGACTATTGTACAAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGRCTIVQSKDSTGELGTLESGR*TIVQSK Trigger: TTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAG...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | AACAGAAATTTATTCTCTCACAGTTCTGGAGCCAGAAGTCTGAAATCAAGGTGCAGTCTGAAATCAAGGTaGTGGCAGGGTTATATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRNLFSHSSGARSLKSRCSLKSR*WQGYIF Trigger: GAAAATATAACCCTGCCAGCACCTTGATTTCAGACT...GCACCTTGATTTCAGACTTCTGGCTCCAGAACTGTGAGAGAATAAATTTCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
||
| CDS-3UTR CCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATAGTTCCAAAACCTTTTaGAAACTGCTTAATGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDSSKTF*KLLNAA Trigger: AGCGGCATTAAGCAGTTTCCAAAAGGTTTTGGAACT...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTAACTCCCATAATCAGTaGATGAGGGATGGCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: CTFRARCQYSINPMVFWFNSHNQ*MRDGRL Trigger: AAGTCTGCCATCCCTCATCCACTGATTATGGGAGTT...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTGAGAGCATCTACTTGTaGCAGCCAAAGATTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSESIYL*QPKISL Trigger: CAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTC...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACATCAGTCTGGCACGACTaGTGTAACTGGCGTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LYYTAGTEIYGHIFRELTSVWHD*CNWRKI Trigger: AATTTTACGCCAGTTACATCAGTCGTGCCAGACTGA...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGACTTGATGTGAAGTaGCTGTTCATAGAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSRLDVK*LFIECF Trigger: AAAGCACTCTATGAACAGTCACTTCACATCAAGTCT...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAACTCAATACATTCAAATGAGCTGAGTTCCTTTAAGGTAGTTACCTTGGTTCAAGGAGTTGGTTaGCTTGATCAATTCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IQNSIHSNELSSFKVVTLVQGVG*LDQFGH Trigger: ATGGCCGAATTGATCAAGTCAACCAACTCCTTGAAC...CAAGGTAACTACCTTAAAGGAACTCAGCTCATTTGAATGTATTGAGTTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCCATGACAAATTACTATaGTGTTGTACGTTTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FCHNSNNFQDTSTDSSFAHDKLL*CCTFRA Trigger: TGCCCTAAACGTACAACATCATAGTAATTTGTCATG...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTTGGTCATGTTGCCCATaGCAAATTACTATGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSWSCCP*QITMML Trigger: CAACATCATAGTAATTTGTCATGGGCAACATGACCA...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCTGCTTGAAACCTAAGTaGCAGTATGCCACTATAATT | + |
|
Preference number: 4 (lower is better) Translates to: FCHNSNNFQDTSTDSSFACLKPK*QYATII Trigger: AATTATAGTGGCATACTGTCACTTAGGTTTCAAGCA...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATTGCTTGAAACCTAAGTaGCAGTATGCCACTATAATT | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDCLKPK*QYATII Trigger: AATTATAGTGGCATACTGTCACTTAGGTTTCAAGCA...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATGTTTATTTTGCTGCTTaGAACCTAAGTGACAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDVYFAA*NLSDSM Trigger: CATACTGTCACTTAGGTTTCAAGCAGCAAAATAAAC...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | CTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGCTACAATTTCTGAGCTaGACTGTTTATTTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LESGRCTIVQSKDSTGELLQFLS*TVYFAA Trigger: AGCAGCAAAATAAACAGTGCAGCTCAGAAATTGTAG...CAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | CTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGCAAATAACAAGTGCATaGTTTCTCTCTAGAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LESGRCTIVQSKDSTGELQITSA*FLSRKW Trigger: CCACTTTCTAGAGAGAAAGCATGCACTTGTTATTTG...CAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCGTCTTATGGACTAACTaGTTCACCCATAGATTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCHNSNNFQDTSTDSSFAVLWTN*FTHRFR Trigger: TCTAAATCTATGGGTGAAGCAGTTAGTCCATAAGAC...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | GTGCATGCTTTCTCTCTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGTTCCAAAACCTTTTaGAAACTGCTTAATGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHAFSLESGRCTIVQSKDSSKTF*KLLNAA Trigger: AGCGGCATTAAGCAGTTTCCAAAAGGTTTTGGAACT...ATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAGAGAGAAAGCATGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCAATATTTTAAGCAAGTaGTTCGTCTTGGACTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FCHNSNNFQDTSTDSSFANILSK*FVLDFQ Trigger: CTGGAAGTCCAAGACGAACCACTTGCTTAAAATATT...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CCA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATGAGAATTTAGTTGGTTaGTCCATTTATCTAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDENLVG*SIYLVQ Trigger: CTGCACTAGATAAATGGACCAACCAACTAAATTCTC...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CCA 90 bp | GTGCATGCTTTCTCTCTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATGTTTTAAGGTACACTTaGCATATACCTTTGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VHAFSLESGRCTIVQSKDVLRYT*HIPLMP Trigger: CGGCATCAAAGGTATATGCCAAGTGTACCTTAAAAC...ATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAGAGAGAAAGCATGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | TCTGAAATCAAGGTGCTGGCAGGGTTATATTTTCTTTCTTTGAAGGCTTTAGAGCAAAACTCCAATCTCTaGTTCTGTCTTCACTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEIKVLAGLYFLSLKALEQNSNL*FCLHFD Trigger: GTCAAAGTGAAGACAGAACCAGAGATTGGAGTTTTG...CTCTAAAGCCTTCAAAGAAAGAAAATATAACCCTGCCAGCACCTTGATTTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560240.5 |
||
| CDS-3UTR CCA 90 bp | AATCAAGGTGCTGGCAGGGTTATATTTTCTTTCTTTGAAGGCTTTAGAGGGGAACTGAAATCAAGGTGCTaGCAGGGTTATATTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NQGAGRVIFSFFEGFRGELKSRC*QGYIFF Trigger: AAAGAAAATATAACCCTGCCAGCACCTTGATTTCAG...TTCCCCTCTAAAGCCTTCAAAGAAAGAAAATATAACCCTGCCAGCACCTTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000560240.5 |
||
| 3UTR CAA 72 bp | CCAATAATTTTCAGGACACATCAACCGACAGTAGTTTaGCCATTCCCAGTTCTTTTAAGGATTACATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIIFRTHQPTVV*PFPVLLRITSL Trigger: CAGAGATGTAATCCTTAAAAGAACTGGGAATGGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTCATGACAAATTACTATaGTGTTGTACGTTTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSHDKLL*CCTFRA Trigger: TGCCCTAAACGTACAACATCATAGTAATTTGTCATG...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTTGGTCATGTTGCCCATaGCAAATTACTATGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTFRARCQYSINPMVFWFWSCCP*QITMML Trigger: CAACATCATAGTAATTTGTCATGGGCAACATGACCA...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | GTGCATGCTTTCTCTCTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATGTTTATTTTGCTGCTTaGAACCTAAGTGACAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: VHAFSLESGRCTIVQSKDVYFAA*NLSDSM Trigger: CATACTGTCACTTAGGTTTCAAGCAGCAAAATAAAC...ATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAGAGAGAAAGCATGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAACTCAATACATTCAAATGAGCTGAGTTCCTTTAAGGTAGTTACCTTGGGTTCTCAGTTTTCCTaGAAGATGTATCAGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IQNSIHSNELSSFKVVTLGSQFS*KMYQPV Trigger: TACAGGCTGATACATCTTTCAGGAAAACTGAGAACC...CAAGGTAACTACCTTAAAGGAACTCAGCTCATTTGAATGTATTGAGTTTTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGTCATAAATCCCATATGAAGAATGAAACTCCCAGCTTTACTTGTGTATGCTCACCTTCCCTCAAGTaGATTTTACCACCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSHKSHMKNETPSFTCVCSPSLK*ILPPHS Trigger: AGAATGTGGTGGTAAAATGCACTTGAGGGAAGGTGA...GCATACACAAGTAAAGCTGGGAGTTTCATTCTTCATATGGGATTTATGACTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACAACATCTCTGCACTGTTaGCTTAAGGACGTCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYYTAGTEIYGHIFRELTTSLHC*LKDVCK Trigger: TTTACAGACGTCCTTAAGGCAACAGTGCAGAGATGT...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAATATTTTAAGCAAGTaGTTCGTCTTGGACTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSNILSK*FVLDFQ Trigger: CTGGAAGTCCAAGACGAACCACTTGCTTAAAATATT...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACAAGACTTGATGTGAAGTaGCTGTTCATAGAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYYTAGTEIYGHIFRELTRLDVK*LFIECF Trigger: AAAGCACTCTATGAACAGTCACTTCACATCAAGTCT...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR TCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTCATGACAAATTACTATaGTGTTGTACGTTTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTFRARCQYSINPMVFWFHDKLL*CCTFRA Trigger: TGCCCTAAACGTACAACATCATAGTAATTTGTCATG...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR TCA 90 bp | TTTAGTCATAAATCCCATATGAAGAATGAAACTCCCAGCTTTACTTGTGTATGCTTGTGGTCACATAAATaGAGACCAAATGCCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSHKSHMKNETPSFTCVCLWSHK*RPNAFC Trigger: GCAAAAGGCATTTGGTCTTCATTTATGTGACCACAA...GCATACACAAGTAAAGCTGGGAGTTTCATTCTTCATATGGGATTTATGACTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTATAATTTCTTGTGACTaGACTCCGAATATAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSIISCD*TPNIGQ Trigger: TTGACCTATATTCGGAGTGCAGTCACAAGAAATTAT...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR GCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTGTGTTCAAAAGGGTATaGATTTCAAGTTATTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTFRARCQYSINPMVFWFVFKRV*ISSYCR Trigger: CCTGCAATAACTTGAAATGCATACCCTTTTGAACAC...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTAAACCTTTACTACACTaGAGGTACAGAAATATACGG | + |
|
Preference number: 4 (lower is better) Translates to: CTFRARCQYSINPMVFWFKPLLH*RYRNIR Trigger: CCGTATATTTCTGTACCTGCAGTGTAGTAAAGGTTT...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTGAGAATTTAGTTGGTTaGTCCATTTATCTAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTFRARCQYSINPMVFWFENLVG*SIYLVQ Trigger: CTGCACTAGATAAATGGACCAACCAACTAAATTCTC...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CCA 90 bp | ATCCAAAACTCAATACATTCAAATGAGCTGAGTTCCTTTAAGGTAGTTACCTTGGTTAGGTGGAAGTTTTaGAAACTTTCATTTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IQNSIHSNELSSFKVVTLVRWKF*KLSFGA Trigger: GGCACCAAATGAAAGTTTCCAAAACTTCCACCTAAC...CAAGGTAACTACCTTAAAGGAACTCAGCTCATTTGAATGTATTGAGTTTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | ATCCAAAACTCAATACATTCAAATGAGCTGAGTTCCTTTAAGGTAGTTACCTTGCTTTTGACAACTTCATaGGATGACGCTAGAGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: IQNSIHSNELSSFKVVTLLLTTS*DDARDY Trigger: GTAATCTCTAGCGTCATCCCATGAAGTTGTCAAAAG...CAAGGTAACTACCTTAAAGGAACTCAGCTCATTTGAATGTATTGAGTTTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACAGTGTTCAAAAGGGTATaGATTTCAAGTTATTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYYTAGTEIYGHIFRELTVFKRV*ISSYCR Trigger: CCTGCAATAACTTGAAATGCATACCCTTTTGAACAC...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | CATTTAGCTGTCTATGTTCTGGCATATTCGTTTAAAGTGAACATTCTGAGAGTTAATATTTTAAGCAAGTaGTTCGTCTTGGACTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLAVYVLAYSFKVNILRVNILSK*FVLDFQ Trigger: CTGGAAGTCCAAGACGAACCACTTGCTTAAAATATT...AACTCTCAGAATGTTCACTTTAAACGAATATGCCAGAACATAGACAGCTAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGTCATAAATCCCATATGAAGAATGAAACTCCCAGCTTTACTTGTGTATGCGAGAATTTAGTTGGTTaGTCCATTTATCTAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSHKSHMKNETPSFTCVCENLVG*SIYLVQ Trigger: CTGCACTAGATAAATGGACCAACCAACTAAATTCTC...GCATACACAAGTAAAGCTGGGAGTTTCATTCTTCATATGGGATTTATGACTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTTTGGAAACTTTCATTTaGTGCCAAGTAATGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: CTFRARCQYSINPMVFWFLETFI*CQVMVT Trigger: AGTTACCATTACTTGGCACCAAATGAAAGTTTCCAA...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTTCTATTCATCATTTCTaGAAAGTTTGTCAGGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: CTFRARCQYSINPMVFWFSIHHF*KVCQVV Trigger: TACGACCTGACAAACTTTCCAGAAATGATGAATAGA...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542928.5 |
||
| CDS-3UTR GCA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACAATAATTTCTTGTGACTaGACTCCGAATATAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYYTAGTEIYGHIFRELTIISCD*TPNIGQ Trigger: TTGACCTATATTCGGAGTGCAGTCACAAGAAATTAT...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGTCATAAATCCCATATGAAGAATGAAACTCCCAGCTTTACTTGTGTATGCATAATTTCTTGTGACTaGACTCCGAATATAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSHKSHMKNETPSFTCVCIISCD*TPNIGQ Trigger: TTGACCTATATTCGGAGTGCAGTCACAAGAAATTAT...GCATACACAAGTAAAGCTGGGAGTTTCATTCTTCATATGGGATTTATGACTAAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR GCA 90 bp | CATTTAGCTGTCTATGTTCTGGCATATTCGTTTAAAGTGAACATTCTGAGAGTTTCTTATGACACATCCTaGACATATAATCAGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLAVYVLAYSFKVNILRVSYDTS*TYNQFS Trigger: TGAGAACTGATTATATGTGCAGGATGTGTCATAAGA...AACTCTCAGAATGTTCACTTTAAACGAATATGCCAGAACATAGACAGCTAAATG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CCA 90 bp | CATTTAGCTGTCTATGTTCTGGCATATTCGTTTAAAGTGAACATTCTGAGAGTTTACCTCAAAGTTAGGTaGAAGTTTTGGAAACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLAVYVLAYSFKVNILRVYLKVR*KFWKLS Trigger: TGAAAGTTTCCAAAACTTCCACCTAACTTTGAGGTA...AACTCTCAGAATGTTCACTTTAAACGAATATGCCAGAACATAGACAGCTAAATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS CCA 90 bp | TCATCCTCCATGTCAGACATCTTGGCCGGGAGGGGGAGGAGAAATTaGAGACAACCTCCTCCCACAATCCTCCGCGGCTCAGAGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSMSDILAGRGRRN*RQPPPTILRGSEAS Trigger: TGACGCCTCTGAGCCGCGGAGGATTGTGGGAGGAGGTTGTCTCCAATTTCTCCTCCCCCTCCCGGCCAAGATGTCTGACATGGAGGATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299259.10 |
||
| CDS TCA 90 bp | TATCTTCAGAGTATTCCAGGTCGTAGTCCTCCTCATCATCGCACATaGAATCATCCTCCATGTCAGACATCTTGGCCGGGAGGGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YLQSIPGRSPPHHRT*NHPPCQTSWPGGGG Trigger: TCCTCCCCCTCCCGGCCAAGATGTCTGACATGGAGGATGATTTCATGTGCGATGATGAGGAGGACTACGACCTGGAATACTCTGAAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000558545.1 |
||
| CDS TCA 90 bp | TTTCTGGAAAGTTTGTCAGGTCGTAGTCCTCCTCATCATCGCACATaGAATCATCCTCCATGTCAGACATCTTGGCCGGGAGGGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLESLSGRSPPHHRT*NHPPCQTSWPGGGG Trigger: TCCTCCCCCTCCCGGCCAAGATGTCTGACATGGAGGATGATTTCATGTGCGATGATGAGGAGGACTACGACCTGACAAACTTTCCAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000542928.5 ENST00000561248.1 |
||
| CDS-3UTR CAA 90 bp | TCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGCACAGCTACTCCGGAGATaGAGGCAGGAGAATCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCSREHLLVAAKDFFAQLLRR*RQENRL Trigger: CAAGCGATTCTCCTGCCTCAATCTCCGGAGTAGCTG...TGCAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | TTGCCTTTCTCCTACCTTCTGGTGTTTCTTGGCTCTTGGTTTCTTGGCTTATGGGGTTCTGTCTTCACTTaGACCTCTTCTCTGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPFSYLLVFLGSWFLGLWGSVFT*TSSLCV Trigger: GACACACAGAGAAGAGGTCAAAGTGAAGACAGAACC...CCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
||
| CDS-3UTR CAA 90 bp | TTGCCTTTCTCCTACCTTCTGGTGTTTCTTGGCTCTTGGTTTCTTGGCTTATGGACCTTCTGGTGTTTCTaGGCTCTTGGTTTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPFSYLLVFLGSWFLGLWTFWCF*ALGFLA Trigger: AGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGT...CCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAAGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560240.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCTACCTTCTGGTGTTTCTTGGCTCTTGGTTTCTTGGCTTATGGCAGCATTGGCTCTTGGTTTCTaGGCTTATGGCAGCAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: FLLPSGVSWLLVSWLMAALALGF*AYGSKT Trigger: AGTTTTGCTGCCATAAGCCAAGAAACCAAGAGCCAA...TGCTGCCATAAGCCAAGAAACCAAGAGCCAAGAAACACCAGAAGGTAGGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560240.5 |
||
| CDS-3UTR CAA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTATTTCTGGATCATTTTaGTACGGCTTGGCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SGRCTIVQSKDSTGELGTISGSF*YGLASC Trigger: ACAGGAGGCCAAGCCGTACAAAAATGATCCAGAAAT...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTTTTAAGGTAGTTACCTaGGAAGGCCACAGTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SGRCTIVQSKDSTGELGTFKVVT*EGHSSF Trigger: GAATGAACTGTGGCCTTCCAAGGTAACTACCTTAAA...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATAGCAAGTGGTTCGTCTaGGACTTCCAGATTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDSKWFV*DFQIHH Trigger: ATGATGAATCTGGAAGTCCAAGACGAACCACTTGCT...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCAGCAAGTGGTTCGTCTaGGACTTCCAGATTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: FCHNSNNFQDTSTDSSFASKWFV*DFQIHH Trigger: ATGATGAATCTGGAAGTCCAAGACGAACCACTTGCT...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | CTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGTCATTTTTGTACGGCTaGGCCTCCTGTGAGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LESGRCTIVQSKDSTGELSFLYG*ASCESN Trigger: ATTTGACTCACAGGAGGCCAAGCCGTACAAAAATGA...CAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATCTGACTACAGCCTGGTaGAGAGAATTTAGTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDLTTAW*REFSWL Trigger: CAACCAACTAAATTCTCTCAACCAGGCTGTAGTCAG...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCCTGACTACAGCCTGGTaGAGAGAATTTAGTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FCHNSNNFQDTSTDSSFALTTAW*REFSWL Trigger: CAACCAACTAAATTCTCTCAACCAGGCTGTAGTCAG...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATGTAGAGAGCATCTACTaGTGGCAGCCAAAGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDVESIY*WQPKIS Trigger: AGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTAC...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | AGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCACAGGAGAACTGGGCACTCTGATACTCCATCTCTaGTTCTGGATAGTGTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SGRCTIVQSKDSTGELGTLILHL*FWIVFL Trigger: TAAGAACACTATCCAGAACAAGAGATGGAGTATCAG...AGTGCCCAGTTCTCCTGTGCTATCTTTGCTTTGTACAATAGTGCATCTTCCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTCAACACGGAACAAAGTaGCCCCCGAATAGTAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSQHGTK*PPNSKY Trigger: GTACTTACTATTCGGGGGCAACTTTGTTCCGTGTTG...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTTCATTTTTGTACGGCTaGGCCTCCTGTGAGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSSFLYG*ASCESN Trigger: ATTTGACTCACAGGAGGCCAAGCCGTACAAAAATGA...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTATTTCTGGATCATTTTaGTACGGCTTGGCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSISGSF*YGLASC Trigger: ACAGGAGGCCAAGCCGTACAAAAATGATCCAGAAAT...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATATCCAGTTCAAGGAGTaGGTTGACTTGATCAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDIQFKE*VDLINS Trigger: CGAATTGATCAAGTCAACCAACTCCTTGAACTGGAT...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCATCCAGTTCAAGGAGTaGGTTGACTTGATCAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: FCHNSNNFQDTSTDSSFAIQFKE*VDLINS Trigger: CGAATTGATCAAGTCAACCAACTCCTTGAACTGGAT...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATGACGTCTGTAAAAGCTaGTTCTCTGTTAAGCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDDVCKS*FSVKPV Trigger: AACTGGCTTAACAGAGAACAAGCTTTTACAGACGTC...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATCAACCGACAGTAGTTTaGCCATTCCCAGTTCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDQPTVV*PFPVLL Trigger: TAAAAGAACTGGGAATGGCAAAACTACTGTCGGTTG...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | AATCCAGCTCTTGTAGTAGAGAGCATCTACTTGTGGCAGCCAAAGATTTCTTTGGTGGAAGATGCACTATaGTACAAAGCAAAGATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NPALVVESIYLWQPKISLVEDAL*YKAKIA Trigger: TGCTATCTTTGCTTTGTACAATAGTGCATCTTCCAC...CAAAGAAATCTTTGGCTGCCACAAGTAGATGCTCTCTACTACAAGAGCTGGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCTTTCCAAATCCACATTaGGCTCGGAGTTACTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FCHNSNNFQDTSTDSSFAFPNPH*ARSYYL Trigger: AAGATAGTAACTCCGAGCCAAATGTGGATTTGGAAA...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATTTTCCAAATCCACATTaGGCTCGGAGTTACTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDFPNPH*ARSYYL Trigger: AAGATAGTAACTCCGAGCCAAATGTGGATTTGGAAA...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATTGCTTAATGCCGCTTTaGGGTCATCTTCTTTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDCLMPL*GHLLLM Trigger: CATTAAAAGAAGATGACCCAAAAGCGGCATTAAGCA...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAGTTTTGCCTCAAAGCTTCCAGTGTaGTTTCATAGAATTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FCHNSNNFQDTSTDSSFASKLPV*FHRIPA Trigger: TGCAGGAATTCTATGAAACAACACTGGAAGCTTTGA...GGCAAAACTACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTATTTCTGGATCATTTTaGTACGGCTTGGCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CTFRARCQYSINPMVFWFISGSF*YGLASC Trigger: ACAGGAGGCCAAGCCGTACAAAAATGATCCAGAAAT...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCACTTCTGCCATAACTCCAATAATTTTCAGGACACATCAACCGACAGTAAGGAGTTGGTTGACTaGATCAATTCGGCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KKHFCHNSNNFQDTSTDSKELVD*INSAMN Trigger: ATTCATGGCCGAATTGATCAAGTCAACCAACTCCTT...ACTGTCGGTTGATGTGTCCTGAAAATTATTGGAGTTATGGCAGAAGTGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | GTGCATGCTTTCTCTCTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAAGGAGTTGGTTGACTaGATCAATTCGGCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VHAFSLESGRCTIVQSKDKELVD*INSAMN Trigger: ATTCATGGCCGAATTGATCAAGTCAACCAACTCCTT...ATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAGAGAGAAAGCATGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | GTGCATGCTTTCTCTCTAGAAAGTGGAAGATGCACTATTGTACAAAGCAAAGATAGCATGCCAAAACTTTaGACAACTTCATGGGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: VHAFSLESGRCTIVQSKDSMPKL*TTSWDD Trigger: GTCATCCCATGAAGTTGTCAAAAGTTTTGGCATGCT...ATCTTTGCTTTGTACAATAGTGCATCTTCCACTTTCTAGAGAGAAAGCATGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACAAGCAAGTGGTTCGTCTaGGACTTCCAGATTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LYYTAGTEIYGHIFRELTSKWFV*DFQIHH Trigger: ATGATGAATCTGGAAGTCCAAGACGAACCACTTGCT...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTAAGGAGTTGGTTGACTaGATCAATTCGGCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CTFRARCQYSINPMVFWFKELVD*INSAMN Trigger: ATTCATGGCCGAATTGATCAAGTCAACCAACTCCTT...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACACTGACTACAGCCTGGTaGAGAGAATTTAGTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYYTAGTEIYGHIFRELTLTTAW*REFSWL Trigger: CAACCAACTAAATTCTCTCAACCAGGCTGTAGTCAG...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATAAGAGAACCTCCAATTaGTCTTCGTTACGAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDKRTSN*SSLRNF Trigger: GAAATTTCGTAACGAAGACAAATTGGAGGTTCTCTT...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CTGGTCATGTTGCCCATGACAAATTACTATGATGTTGTACGTTTAGGGCAAGATGCAAAGTTCATAATTTaGCCAACACGGAACAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVMLPMTNYYDVVRLGQDAKFII*PTRNKV Trigger: AACTTTGTTCCGTGTTGGCAAAATTATGAACTTTGC...ATCTTGCCCTAAACGTACAACATCATAGTAATTTGTCATGGGCAACATGACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTTGCTTAATGCCGCTTTaGGGTCATCTTCTTTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: CTFRARCQYSINPMVFWFCLMPL*GHLLLM Trigger: CATTAAAAGAAGATGACCCAAAAGCGGCATTAAGCA...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACAATCCAGTTCAAGGAGTaGGTTGACTTGATCAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: LYYTAGTEIYGHIFRELTIQFKE*VDLINS Trigger: CGAATTGATCAAGTCAACCAACTCCTTGAACTGGAT...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CATTTAGCTGTCTATGTTCTGGCATATTCGTTTAAAGTGAACATTCTGAGAGTTGACGTCTGTAAAAGCTaGTTCTCTGTTAAGCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HLAVYVLAYSFKVNILRVDVCKS*FSVKPV Trigger: AACTGGCTTAACAGAGAACAAGCTTTTACAGACGTC...AACTCTCAGAATGTTCACTTTAAACGAATATGCCAGAACATAGACAGCTAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACACAACCGACAGTAGTTTaGCCATTCCCAGTTCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LYYTAGTEIYGHIFRELTQPTVV*PFPVLL Trigger: TAAAAGAACTGGGAATGGCAAAACTACTGTCGGTTG...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGTCATAAATCCCATATGAAGAATGAAACTCCCAGCTTTACTTGTGTATGCCAACCGACAGTAGTTTaGCCATTCCCAGTTCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FSHKSHMKNETPSFTCVCQPTVV*PFPVLL Trigger: TAAAAGAACTGGGAATGGCAAAACTACTGTCGGTTG...GCATACACAAGTAAAGCTGGGAGTTTCATTCTTCATATGGGATTTATGACTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAACTCAATACATTCAAATGAGCTGAGTTCCTTTAAGGTAGTTACCTTGAAGACCAAATGCCTTTaGCGTCACATTCTGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: IQNSIHSNELSSFKVVTLKTKCL*RHILKP Trigger: AGGTTTCAGAATGTGACGCAAAAGGCATTTGGTCTT...CAAGGTAACTACCTTAAAGGAACTCAGCTCATTTGAATGTATTGAGTTTTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CATTTAGCTGTCTATGTTCTGGCATATTCGTTTAAAGTGAACATTCTGAGAGTTGGTTTTAAGGTACACTaGGCATATACCTTTGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLAVYVLAYSFKVNILRVGFKVH*AYTFDA Trigger: GGCATCAAAGGTATATGCCAAGTGTACCTTAAAACC...AACTCTCAGAATGTTCACTTTAAACGAATATGCCAGAACATAGACAGCTAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | TGTACGTTTAGGGCAAGATGTCAATACAGCATAAATCCCATGGTATTTTGGTTTAGAGAATTTAGTTGGTaGGTCCATTTATCTAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CTFRARCQYSINPMVFWFREFSW*VHLSSA Trigger: TGCACTAGATAAATGGACCAACCAACTAAATTCTCT...AAACCAAAATACCATGGGATTTATGCTGTATTGACATCTTGCCCTAAACGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
||
| CDS-3UTR CAA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACAAGAGAATTTAGTTGGTaGGTCCATTTATCTAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LYYTAGTEIYGHIFRELTREFSW*VHLSSA Trigger: TGCACTAGATAAATGGACCAACCAACTAAATTCTCT...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299259.10 ENST00000388901.10 |
||
| CDS-3UTR CAA 90 bp | CATTTAGCTGTCTATGTTCTGGCATATTCGTTTAAAGTGAACATTCTGAGAGTTAACTATGCACGTGTTTaGTTAGAAAGTAGTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: HLAVYVLAYSFKVNILRVNYARV*LESSSP Trigger: AGGAGAACTACTTTCTAACAAAACACGTGCATAGTT...AACTCTCAGAATGTTCACTTTAAACGAATATGCCAGAACATAGACAGCTAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| CDS-3UTR CAA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACATTTGGAAACTTTCATTaGGTGCCAAGTAATGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: LYYTAGTEIYGHIFRELTFGNFH*VPSNGN Trigger: GTTACCATTACTTGGCACCAAATGAAAGTTTCCAAA...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| CDS-3UTR CAA 90 bp | CTTTACTACACTGCAGGTACAGAAATATACGGACACATTTTTAGAGAATTGACAAAAACTCTTTTGGGATaGCCTTCAAAGCCAGTTATA | + |
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Preference number: 5 (lower is better) Translates to: LYYTAGTEIYGHIFRELTKTLLG*PSKPVI Trigger: TATAACTGGCTTTGAAGGCAATCCCAAAAGAGTTTT...TGTCAATTCTCTAAAAATGTGTCCGTATATTTCTGTACCTGCAGTGTAGTAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000388901.10 |
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| CDS CAA 90 bp | ATCATCCTCCATGTCAGACATCTTGGCCGGGAGGGGGAGGAGAAATaGGAGACAACCTCCTCCCACAATCCTCCGCGGCTCAGAGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: IILHVRHLGREGEEK*ETTSSHNPPRLRGV Trigger: GACGCCTCTGAGCCGCGGAGGATTGTGGGAGGAGGTTGTCTCCAATTTCTCCTCCCCCTCCCGGCCAAGATGTCTGACATGGAGGATGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299259.10 |
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| CDS CCA 72 bp | ATGTCAGACATCTTGGCCGGGAGGGGGAGGAGAAATTaGAGACAACCTCCTCCCACAATCCTCCGCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: MSDILAGRGRRN*RQPPPTILRGS Trigger: TGAGCCGCGGAGGATTGTGGGAGGAGGTTGTCTCCAATTTCTCCTCCCCCTCCCGGCCAAGATGTCTGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299259.10 |
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| CDS TCA 72 bp | AGTATTCCAGGTCGTAGTCCTCCTCATCATCGCACATaGAATCATCCTCCATGTCAGACATCTTGGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: SIPGRSPPHHRT*NHPPCQTSWPG Trigger: TCCCGGCCAAGATGTCTGACATGGAGGATGATTTCATGTGCGATGATGAGGAGGACTACGACCTGGAATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000558545.1 ENST00000558843.5 |
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| CDS TCA 72 bp | AGTTTGTCAGGTCGTAGTCCTCCTCATCATCGCACATaGAATCATCCTCCATGTCAGACATCTTGGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: SLSGRSPPHHRT*NHPPCQTSWPG Trigger: TCCCGGCCAAGATGTCTGACATGGAGGATGATTTCATGTGCGATGATGAGGAGGACTACGACCTGACAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542928.5 ENST00000561248.1 |
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| CDS GCA 72 bp | AGCAAGAGTTTAATTAAACACTTTGATATCTCCCCATaGCACTGCCCACCCTCTCCAAACCAAACTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SKSLIKHFDISP*HCPPSPNQTCL Trigger: GAGGCAAGTTTGGTTTGGAGAGGGTGGGCAGTGGCATGGGGAGATATCAAAGTGTTTAATTAAACTCTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559016.1 |
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| CDS GCA 72 bp | TTCCCAGTTCTTTTAAGGATTACATCTCTGCACTGTTaGCTTAAGGACGTCTGTAAAAGCTTGTTCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FPVLLRITSLHC*LKDVCKSLFSV Trigger: AACAGAGAACAAGCTTTTACAGACGTCCTTAAGGCAACAGTGCAGAGATGTAATCCTTAAAAGAACTGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
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| CDS CCA 72 bp | AGTTTACTGACTACAGCCTGGTTGAGAGAATTTAGTTaGTTGGTCCATTTATCTAGTGCAGTATATCGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SLLTTAWLREFS*LVHLSSAVYRA Trigger: TGCACGATATACTGCACTAGATAAATGGACCAACCAACTAAATTCTCTCAACCAGGCTGTAGTCAGTAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299259.10 ENST00000388901.10 ENST00000542928.5 |
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