RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COPB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184432

Ensembl transcript IDs: ENST00000333188.10, ENST00000502734.2, ENST00000503326.6, ENST00000504295.1, ENST00000507777.6, ENST00000510181.6, ENST00000510491.5, ENST00000512153.5, ENST00000512242.6, ENST00000512309.2, ENST00000513274.5, ENST00000514508.2, ENST00000515006.5, ENST00000676700.1, ENST00000677073.1, ENST00000677309.1, ENST00000677601.1, ENST00000677882.1

Found 1415 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGAGTGCTAGCTaGGGAAGCACTGAATTAGGGTGTCCTCAGCCCTCCATTCCCAAC +
Preference number: 1 (lower is better)
Translates to: PAQVRGTQGRLKSAS*GSTELGCPQPSIPN
Trigger: GTTGGGAATGGAGGGCTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 90 bp CAGTGCAGGGAGCAGCCCCTTTGTTCTTTGGAGCACTGGAAGGGCTaGGCTGCATCTGAGGTGTTCAAGCCACCAACAGGACAGGGTAGA +
Preference number: 1 (lower is better)
Translates to: QCREQPLCSLEHWKG*AASEVFKPPTGQGR
Trigger: TCTACCCTGTCCTGTTGGTGGCTTGAACACCTCAGATGCAGCTCAGCCCTTCCAGTGCTCCAAAGAACAAAGGGGCTGCTCCCTGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR GCA 90 bp TTCTCAGAATCGATGATGCAACCAACTTGGTCCAGCTGTATCACGTaGTCCATCCAGATGGCCAGTCGGCTCAAGGGGCCAAGGATCAGG +
Preference number: 1 (lower is better)
Translates to: FSESMMQPTWSSCIT*SIQMASRLKGPRIR
Trigger: CCTGATCCTTGGCCCCTTGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATCGATTCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 90 bp AGCCTCAGTATAAGCCCAGAGCATTTCTCTAAGGCTACCAAGGCTTaGGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCC +
Preference number: 1 (lower is better)
Translates to: SLSISPEHFSKATKA*GILYLLPLSPCSSS
Trigger: GGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAGCCTTAGAGAAATGCTCTGGGCTTATACTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR GCA 90 bp TTAGACTGGCCACGCACCATACCCTCTCCATTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGCTTGAATGCCAAATACGTACTGTTC +
Preference number: 1 (lower is better)
Translates to: LDWPRTIPSPFHNSV*SQAGRCLNAKYVLF
Trigger: GAACAGTACGTATTTGGCATTCAAGCACCTACCGGCTTGAGAGCACACTGAATTATGGAATGGAGAGGGTATGGTGCGTGGCCAGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR GCA 90 bp GGCCCATGCAAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATaGCATTGCTGTGTAGATGATATACTCCCCATCACCACACACCAC +
Preference number: 1 (lower is better)
Translates to: GPCKLLSRSKALVSQ*HCCVDDILPITTHH
Trigger: GTGGTGTGTGGTGATGGGGAGTATATCATCTACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 90 bp TGCGGAAGCACTGAATTAGGGTGTCCTCAGCCCTCCATTCCCAACTaGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAG +
Preference number: 1 (lower is better)
Translates to: CGSTELGCPQPSIPN*KPVVHLVYIAEPQK
Trigger: CTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCTAATTCAGTGCTTCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 90 bp TCCCTTCATCATAGCCCAAAGCGACATTGTTTGACCCTCTTAGACTaGCCACGCACCATACCCTCTCCATTCCATAATTCAGTGTGCTCT +
Preference number: 1 (lower is better)
Translates to: SLHHSPKRHCLTLLD*PRTIPSPFHNSVCS
Trigger: AGAGCACACTGAATTATGGAATGGAGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGGGCTATGATGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR GCA 90 bp TCAGCATCTCCCATTGCTTTTAGGTTGGCCTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCA +
Preference number: 1 (lower is better)
Translates to: SASPIAFRLACWTSE*LAQIIFPLASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGGAGATGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR CCA 90 bp CATCTCCCATTGCTTTTAGGTTGGCCTGCTGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCAGGTT +
Preference number: 1 (lower is better)
Translates to: HLPLLLGWPAGLLNA*PKLSFHWHPWTWQV
Trigger: AACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR TCA 90 bp CATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCTAATGATGTTCAATTCTTTATCCCC +
Preference number: 1 (lower is better)
Translates to: HAKVPPHDSCLVFQD*NQQGIANDVQFFIP
Trigger: GGGGATAAAGAATTGAACATCATTAGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 90 bp CCCTCCTGCTTATGTGGGATGAAGCTGTGTTTCTGTCCTCTGAGTTaGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAAT +
Preference number: 1 (lower is better)
Translates to: PSCLCGMKLCFCPLS*IRLLHAGEVSWPGN
Trigger: ATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAGAGGACAGAAACACAGCTTCATCCCACATAAGCAGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 90 bp ACTGTTCCATCTTCTGAACCTGTGATAATGATTGGCAACTCAGGATaGAAGCTGGCACAAGACACATTTTGGGCATGTCCTTCCAGTGTC +
Preference number: 1 (lower is better)
Translates to: TVPSSEPVIMIGNSG*KLAQDTFWACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAATCATTATCACAGGTTCAGAAGATGGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR GCA 90 bp GTCATCCGCTCCTGTCACAACCCAATTCTTCCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATCACATACTTCAAATGTCTTCACCAG +
Preference number: 1 (lower is better)
Translates to: VIRSCHNPILPCNKL*SSNRKITYFKCLHQ
Trigger: CTGGTGAAGACATTTGAAGTATGTGATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTTGTGACAGGAGCGGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR GCA 90 bp TGCAAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTaGTGTGTAGATGATATACTCCCCATCACCACACACCACCACAAA +
Preference number: 1 (lower is better)
Translates to: CKLLSRSKALVSQCH*CVDDILPITTHHHK
Trigger: TTTGTGGTGGTGTGTGGTGATGGGGAGTATATCATCTACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 90 bp GACATTTCTCTCTTCATTTGGCGTGACAAGTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGTTTCCTTCACCCATTCTTCAACAAC +
Preference number: 1 (lower is better)
Translates to: DISLFIWRDKWVLFG*PQISMCFLHPFFNN
Trigger: GTTGTTGAAGAATGGGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCACGCCAAATGAAGAGAGAAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 90 bp CCATCTTTAATTTCAGCATCTCCCATTGCTTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCCCAAATTATCTTTCCATTGGCATCC +
Preference number: 1 (lower is better)
Translates to: PSLISASPIAFRLAC*TSECLAQIIFPLAS
Trigger: GGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAATTAAAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR TCA 90 bp GTTCTGTATTGTCCCAGTCATAGAAGGCTAAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGCCGTAGATACTTTCTGCTCCAAAAT +
Preference number: 1 (lower is better)
Translates to: VLYCPSHRRLSHLQI*LPIRSRRRYFLLQN
Trigger: ATTTTGGAGCAGAAAGTATCTACGGCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCTTAGCCTTCTATGACTGGGACAATACAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 90 bp TCTGCTTCCACTGCTAACTGGTATGCAATTTTTAACTCTCCAAGCTaGAGAGCAAGCTCAAAACGATGCTCAGGATCTGTGGATACTGTA +
Preference number: 1 (lower is better)
Translates to: SASTANWYAIFNSPS*RASSKRCSGSVDTV
Trigger: TACAGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGCTCTTCAGCTTGGAGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 90 bp AGAAAACCCCTAGATAACATTAAACCCTTTCATTCTCAGAATCGATaGTGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGA +
Preference number: 1 (lower is better)
Translates to: RKPLDNIKPFHSQNR*CNQLGPAVSRAPSR
Trigger: TCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATCGATTCTGAGAATGAAAGGGTTTAATGTTATCTAGGGGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR GCA 90 bp TCTAATCTGCATGTCATCCGCTCCTGTCACAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCGAACAGGAAGATCACATACTTCAAA +
Preference number: 1 (lower is better)
Translates to: SNLHVIRSCHNPILP*NKLCSSNRKITYFK
Trigger: TTTGAAGTATGTGATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTTGTGACAGGAGCGGATGACATGCAGATTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR GCA 90 bp GGTTTTGTGGAACTGGCTTCTATCCTAGTAATACTGTTTGCATGCTaGAAAGCTAAGGAAACAATGACCTGTGATGACATCCTAGGAAGA +
Preference number: 1 (lower is better)
Translates to: GFVELASILVILFAC*KAKETMTCDDILGR
Trigger: TCTTCCTAGGATGTCATCACAGGTCATTGTTTCCTTAGCTTTGCAGCATGCAAACAGTATTACTAGGATAGAAGCCAGTTCCACAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 90 bp GGAAAACACAGTGATTTAAATGCTGCACATAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATA +
Preference number: 1 (lower is better)
Translates to: GKHSDLNAAHKLFLR*CGHCAPSGPQHLHI
Trigger: TATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAGAGTTTATGTGCAGCATTTAAATCACTGTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 90 bp TTTATTCTGATAATCCCATATTTTAACAAGACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTCCCCACCACTGTAGTAATCAATGCA +
Preference number: 1 (lower is better)
Translates to: FILIIPYFNKTVICT*NEVWLVPTTVVINA
Trigger: TGCATTGATTACTACAGTGGTGGGGACAAGCCATACCTCATTTCAGGTGCAGATGACCGTCTTGTTAAAATATGGGATTATCAGAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR TCA 90 bp AGTCAGACCAGAAAATATGTTTGGGCTGAATTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGTCATAGAAGGCTAAGCCATTTACAG +
Preference number: 1 (lower is better)
Translates to: SQTRKYVWAEFQFFV*VLYCPSHRRLSHLQ
Trigger: CTGTAAATGGCTTAGCCTTCTATGACTGGGACAATACAGAACTCATACGAAGAATTGAAATTCAGCCCAAACATATTTTCTGGTCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 90 bp TACTCATCACATGTAAGCTTTACATCTGAAGCAATTCATGCTTACTaGGAGGGAAGTTTGAGTACTTACTTAGCTTTTCCTGCTATTCCT +
Preference number: 1 (lower is better)
Translates to: YSSHVSFTSEAIHAY*EGSLSTYLAFPAIP
Trigger: AGGAATAGCAGGAAAAGCTAAGTAAGTACTCAAACTTCCCTCCCAGTAAGCATGAATTGCTTCAGATGTAAAGCTTACATGTGATGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 90 bp AGTGTGATGCTTGTATATCATCAAGCCTTAGCTGTATTGTCATTTTaGAGCTGCATACCTCTCAAAACCATGGGCTTATGTACATTTATC +
Preference number: 1 (lower is better)
Translates to: SVMLVYHQALAVLSF*SCIPLKTMGLCTFI
Trigger: GATAAATGTACATAAGCCCATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAATACAGCTAAGGCTTGATGATATACAAGCATCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 90 bp CTACTCACTTTTCGTAGGCTACAAGGATATTTGAGTGCCTGGTTATaGATTTCTCAAATCATGTTAGATGAGCGTACGGTTAAAAAGTCT +
Preference number: 1 (lower is better)
Translates to: LLTFRRLQGYLSAWL*ISQIMLDERTVKKS
Trigger: AGACTTTTTAACCGTACGCTCATCTAACATGATTTGAGAAATTCATAACCAGGCACTCAAATATCCTTGTAGCCTACGAAAAGTGAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCAGAACGCAGGGAAGGCTaGAGAGTGCTAGCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSERREG*RVLAAE
Trigger: TTCCGCAGCTAGCACTCTTCAGCCTTCCCTGCGTTC...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGCTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 2 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKLVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 2 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAGAGCACTGGAAGGGCTaGGCTGCATCTGAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGEHWKG*AASEVF
Trigger: GAACACCTCAGATGCAGCTCAGCCCTTCCAGTGCTC...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGCCTCCAGCGATGAGATaGCAAATGGTGGGAAAGTGT +
Preference number: 2 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKPPAMR*QMVGKC
Trigger: ACACTTTCCCACCATTTGCCATCTCATCGCTGGAGG...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGGTAGATCTTGAGGGCTaGAAGTCTTTTCCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKVDLEG*KSFPSS
Trigger: GGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTAC...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGGCCCATATCCTTTACTaGCAGTGGCAATCTTTCACC +
Preference number: 2 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKAHILY*QWQSFT
Trigger: GGTGAAAGATTGCCACTGGCAGTAAAGGATATGGGC...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 2 (lower is better)
Translates to: NWTLPAVTPALAASRSWCWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGACTATTACATGCTGGTaGAGTAAGCTGGCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKTITCW*SKLAWK
Trigger: TTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGT...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACTTTGAGATCCCTGTaGCCACCACCCTCCTGCTTA +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGTLRSL*PPPSCL
Trigger: TAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGT...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGACTTTGAGATCCCTGTaGCCACCACCCTCCTGCTTA +
Preference number: 2 (lower is better)
Translates to: QGRLKSASCGSTELGCPQTLRSL*PPPSCL
Trigger: TAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGT...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTGTGCCCTCCAGCGATaGGATGGCAAATGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSCALQR*DGKWWE
Trigger: TTCCCACCATTTGCCATCTCATCGCTGGAGGGCACA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGGCAAGACCTGTGGAATaGTGCAATGAGGTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKARPVE*CNEVKK
Trigger: TTTCTTGACCTCATTGCATCATTCCACAGGTCTTGC...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAAAATTGGACACTTCCTaGAGTGACTCCTGCCCTAGC +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGKLDTS*SDSCPS
Trigger: GCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTCTGGACAGTAGAGGGTaGATATCCTCACTGAGTGGA +
Preference number: 2 (lower is better)
Translates to: NWTLPAVTPALAASRSWCLDSRG*ISSLSG
Trigger: TCCACTCAGTGAGGATATGCACCCTCTACTGTCCAG...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGACTGCAAACCACAGGCTaGACAGTAGAGGGTGCATAT +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGLQTTG*TVEGAY
Trigger: ATATGCACCCTCTACTGTCCAGCCTGTGGTTTGCAG...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGACGCATGACAGCTGTCTaGTATTCCAGGACTGAAACC +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGRMTAV*YSRTET
Trigger: GGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCG...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCATCGGGGCAAGACCTGTaGAATGATGCAATGAGGTCA +
Preference number: 2 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSSGQDL*NDAMRS
Trigger: TGACCTCATTGCATCATTCCACAGGTCTTGCCCCGA...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTCGGGGCAAGACCTGTaGAATGATGCAATGAGGTCA +
Preference number: 2 (lower is better)
Translates to: NWTLPAVTPALAASRSWCSGQDL*NDAMRS
Trigger: TGACCTCATTGCATCATTCCACAGGTCTTGCCCCGA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCATCACATCGGGGGAAATaGGCATGTGTCAAGAAGTGG +
Preference number: 2 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSSHRGK*ACVKKW
Trigger: CCACTTCTTGACACATGCCCATTTCCCCCGATGTGA...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAACTTTGAGATCCCTGTaGCCACCACCCTCCTGCTTA +
Preference number: 2 (lower is better)
Translates to: RVSSALHSQLEASSSLSVTLRSL*PPPSCL
Trigger: TAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGT...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTACAGCTCTGTTTTCCTaGGAGATGGCCTTTAGGGTA +
Preference number: 2 (lower is better)
Translates to: NWTLPAVTPALAASRSWCTALFS*EMAFRV
Trigger: TACCCTAAAGGCCATCTCTCAGGAAAACAGAGCTGT...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGGGTGCATATCCTCACTaGGTGGAGCTCAGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVGAYPH*VELRKE
Trigger: TTCTTTTCTGAGCTCCACTCAGTGAGGATATGCACC...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGGGCCTGCTGGACTTCTaGATGCTTGGCCCAAATTAT +
Preference number: 2 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQGLLDF*MLGPNY
Trigger: ATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCC...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCAGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 2 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTGCTGGTGAAGTAAGCTaGCCTGGAAATTGTCTACCA +
Preference number: 2 (lower is better)
Translates to: NWTLPAVTPALAASRSWCAGEVS*PGNCLP
Trigger: TGGTAGACAATTTCCAGGCCAGCTTACTTCACCAGC...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGTGCTCAGAATATACATaGTTTTGTGGAACTGGCTTC +
Preference number: 2 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKCSEYT*FCGTGF
Trigger: GAAGCCAGTTCCACAAAACCATGTATATTCTGAGCA...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGGTTAAGACAGATTGCTaGTGTAGAACCCGATTTTCC +
Preference number: 2 (lower is better)
Translates to: SGQKQQAPIILCMMQALLVKTDC*CRTRFS
Trigger: GGAAAATCGGGTTCTACATCAGCAATCTGTCTTAAC...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 2 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAAAGTGTCGTTTTTCTGTaGCCTCCAGCGATGAGATGG +
Preference number: 2 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTESVVFL*PPAMRW
Trigger: CCATCTCATCGCTGGAGGGCACAGAAAAACGACACT...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGCCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATC +
Preference number: 2 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVPCNKL*SSNRKI
Trigger: GATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGG...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR GCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTGAACACTCTAATCTaGATGTCATCCGCTCCTGTC +
Preference number: 2 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVLNTLI*MSSAPV
Trigger: GACAGGAGCGGATGACATGCAGATTAGAGTGTTCAA...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR CCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGACCCTCCTGCTTATGTaGGATGAAGCTGTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQTLLLM*DEAVFL
Trigger: CAGAAACACAGCTTCATCCCACATAAGCAGGAGGGT...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCAGGTTCCTCCCGACCCTCCAGCGATGAGATaGCAAATGGTGGGAAAGTGT +
Preference number: 2 (lower is better)
Translates to: WPKLSFHWHPWTWQVPPDPPAMR*QMVGKC
Trigger: ACACTTTCCCACCATTTGCCATCTCATCGCTGGAGG...GTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCCCTCCATTCCCAACTaGAAGCCAGTAGTTCACTTA +
Preference number: 2 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSPSIPN*KPVVHL
Trigger: TAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGACTATTACATGCTGGTaGAGTAAGCTGGCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRTITCW*SKLAWK
Trigger: TTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGT...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGGTTAAGACAGATTGCTaGTGTAGAACCCGATTTTCC +
Preference number: 2 (lower is better)
Translates to: QGRLKSASCGSTELGCPQVKTDC*CRTRFS
Trigger: GGAAAATCGGGTTCTACATCAGCAATCTGTCTTAAC...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAAAAGCACAAGCATTTTaGGTGTCGTTTTTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGKAQAF*VSFFCA
Trigger: GGCACAGAAAAACGACACTCAAAATGCTTGTGCTTT...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGACAGAACTTGTGTAAATaGAGCAATCGCCTACCCAAA +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGQNLCK*SNRLPK
Trigger: TTTGGGTAGGCGATTGCTTCATTTACACAAGTTCTG...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTAAGTGTCGTTTTTCTGTaGCCTCCAGCGATGAGATGG +
Preference number: 2 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVSVVFL*PPAMRW
Trigger: CCATCTCATCGCTGGAGGGCACAGAAAAACGACACT...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 2 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: HISISRGSGQKQQAPIILLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...CAGGATTATGGGGGCCTGCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTACTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: RVSSALHSQLEASSSLSVLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCAGGTTCCTCCCGACGCTGGTGAAGTAAGCTaGCCTGGAAATTGTCTACCA +
Preference number: 2 (lower is better)
Translates to: WPKLSFHWHPWTWQVPPDAGEVS*PGNCLP
Trigger: TGGTAGACAATTTCCAGGCCAGCTTACTTCACCAGC...GTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR CAA 90 bp GCATCTCCCATTGCTTTTAGGTTGGCCTGCTGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCAGGT +
Preference number: 2 (lower is better)
Translates to: ASPIAFRLACWTSEC*AQIIFPLASMDMAG
Trigger: ACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTGTGTTTCTGTCCTCTaGGTTGGATTAGACTATTAC +
Preference number: 2 (lower is better)
Translates to: NWTLPAVTPALAASRSWCCVSVL*VGLDYY
Trigger: GTAATAGTCTAATCCAACTCAGAGGACAGAAACACA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCAACAGCTCTGTTTTCCTaGGAGATGGCCTTTAGGGTA +
Preference number: 2 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPTALFS*EMAFRV
Trigger: TACCCTAAAGGCCATCTCTCAGGAAAACAGAGCTGT...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCAAAGTGAAGTTTGGTaGCGAAGAGCCCAACTGCCA +
Preference number: 2 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHQSEVW*RRAQLP
Trigger: TGGCAGTTGGGCTCTTCGTCACCAAACTTCACTTTG...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR TCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTAATTGGCAACTCAGGATaGAAGCTGGCACAAGACACA +
Preference number: 2 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVIGNSG*KLAQDT
Trigger: TGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAAT...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR TCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAGGACATCTGTGGTCTTaGAAACATCAGTATGATTTG +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGGHLWS*KHQYDL
Trigger: CAAATCATACTGATGTTTTCAAGACCACAGATGTCC...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTAAATTGGACACTTCCTaGAGTGACTCCTGCCCTAGC +
Preference number: 2 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGKLDTS*SDSCPS
Trigger: GCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAGGTATATTTCACAACTaGCCATATCCTTTACTGCCA +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGGIFHN*PYPLLP
Trigger: TGGCAGTAAAGGATATGGGCAGTTGTGAAATATACC...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCATTGTCATTTTGGAGCTaGATACCTCTCAAAACCATG +
Preference number: 2 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSLSFWS*IPLKTM
Trigger: CATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAA...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 2 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAAAATTATCTTTCCATTaGCATCCATGGACATGGCAG +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGKLSFH*HPWTWQ
Trigger: CTGCCATGTCCATGGATGCCAATGGAAAGATAATTT...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGATCGTCCTGTCCAAGTaGGCAATGGTGACTATTTCT +
Preference number: 2 (lower is better)
Translates to: HISISRGSGQKQQAPIILIVLSK*AMVTIS
Trigger: AGAAATAGTCACCATTGCCCACTTGGACAGGACGAT...CAGGATTATGGGGGCCTGCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGTCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 2 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTGCTCAGAATATACATaGTTTTGTGGAACTGGCTTC +
Preference number: 2 (lower is better)
Translates to: NWTLPAVTPALAASRSWCCSEYT*FCGTGF
Trigger: GAAGCCAGTTCCACAAAACCATGTATATTCTGAGCA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CAA 90 bp AATGCCACATTATTTTTGCCATCTCTCTCCGCACCCTCTGCTAGCTaGTTCACCATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: NATLFLPSLSAPSAS*FTILAFPEAVAKSS
Trigger: GCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATGGTGAACAAGCTAGCAGAGGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGTGTGTTTCTGTCCTCTaGGTTGGATTAGACTATTAC +
Preference number: 2 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRCVSVL*VGLDYY
Trigger: GTAATAGTCTAATCCAACTCAGAGGACAGAAACACA...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCAGGTTCCTCCCGACGTTAAGACAGATTGCTaGTGTAGAACCCGATTTTCC +
Preference number: 2 (lower is better)
Translates to: WPKLSFHWHPWTWQVPPDVKTDC*CRTRFS
Trigger: GGAAAATCGGGTTCTACATCAGCAATCTGTCTTAAC...GTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGAAAGTGTCAGCTGTGTaGAAAGATAGTGATTGTTTG +
Preference number: 2 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVKVSAV*KDSDCL
Trigger: CAAACAATCACTATCTTTTCACACAGCTGACACTTT...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCTGTGCCCTCCAGCGATaGGATGGCAAATGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: GIILKHEPNEALNIPTGSCALQR*DGKWWE
Trigger: TTCCCACCATTTGCCATCTCATCGCTGGAGGGCACA...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCAAGGCTACCAAGGCTTaGGGAATTCTGTACTTACTC +
Preference number: 2 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTKATKA*GILYLL
Trigger: GAGTAAGTACAGAATTCCTCAAGCCTTGGTAGCCTT...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AAGGACCTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCTGCTCTTGTTGTCTCTaGCTTGAAAATCCACCCATG +
Preference number: 2 (lower is better)
Translates to: KDLISHAKVPPHDSCLVFCSCCL*LENPPM
Trigger: CATGGGTGGATTTTCAAGTCAGAGACAACAAGAGCA...GAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR TCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 2 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR TCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 2 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGSHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTGTGGAATGATGCAATaGGGTCAAGAAAAAGGGTTT +
Preference number: 2 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQCGMMQ*GQEKGF
Trigger: AAACCCTTTTTCTTGACCTCATTGCATCATTCCACA...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTGAGCACTGGAAGGGCTaGGCTGCATCTGAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVEHWKG*AASEVF
Trigger: GAACACCTCAGATGCAGCTCAGCCCTTCCAGTGCTC...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGCACTGTAGTAATCAATaGAATTCACGCCTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: QGRLKSASCGSTELGCPQHCSNQ*NSRLSH
Trigger: ATGAGAAAGGCGTGAATTGCATTGATTACTACAGTG...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR GCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCTGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 2 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTACTCAGTCGCCATTCTaGAGCTTCCTAAAAATATTT +
Preference number: 2 (lower is better)
Translates to: NWTLPAVTPALAASRSWCTQSPF*SFLKIF
Trigger: AAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGT...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 2 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTCTGTCCTCTGAGTTaGATTAGACTATTACATGCT +
Preference number: 2 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVFCPLS*IRLLHA
Trigger: AGCATGTAATAGTCTAATCCAACTCAGAGGACAGAA...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTACCCTCCTGCTTATGTaGGATGAAGCTGTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGTLLLM*DEAVFL
Trigger: CAGAAACACAGCTTCATCCCACATAAGCAGGAGGGT...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRGLLNA*PKLSFH
Trigger: ATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATCGTGCTCCATCCAGATaGCCAGTCGGCTCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYRAPSR*PVGSRG
Trigger: GCCCCTTGAGCCGACTGGCCATCTGGATGGAGCACG...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CAA 90 bp ATAACATTAAACCCTTTCATTCTCAGAATCGATGATGCAACCAACTaGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCT +
Preference number: 2 (lower is better)
Translates to: ITLNPFILRIDDATN*VQLYHVLHPDGQSA
Trigger: AGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATCGATTCTGAGAATGAAAGGGTTTAATGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTACTATTACATGCTGGTaGAGTAAGCTGGCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGTITCW*SKLAWK
Trigger: TTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGT...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTCCTGCTTATGTGGGATaGAGCTGTGTTTCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSPAYVG*SCVSVL
Trigger: GAGGACAGAAACACAGCTTCATCCCACATAAGCAGG...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGACTTTGAGATCCCTGTaGCCACCACCCTCCTGCTTA +
Preference number: 2 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKTLRSL*PPPSCL
Trigger: TAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGT...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGAAAGCACAAGCATTTTaGGTGTCGTTTTTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQKAQAF*VSFFCA
Trigger: GGCACAGAAAAACGACACTCAAAATGCTTGTGCTTT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGTGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 2 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAGTGTCGTTTTTCTGTaGCCTCCAGCGATGAGATGG +
Preference number: 2 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQSVVFL*PPAMRW
Trigger: CCATCTCATCGCTGGAGGGCACAGAAAAACGACACT...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTAGAATCGTGGGCCCATaGAAACTCCTGAGCAGATCC +
Preference number: 2 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCRIVGP*KLLSRS
Trigger: GGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGATCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 2 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGSLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 2 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSALLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGTTCACTTTCATAAATTaGACACTTCCTGCAGTGACT +
Preference number: 2 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVFTFIN*TLPAVT
Trigger: AGTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAA...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCATGTGTTTCTGTCCTCTaGGTTGGATTAGACTATTAC +
Preference number: 2 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPCVSVL*VGLDYY
Trigger: GTAATAGTCTAATCCAACTCAGAGGACAGAAACACA...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTCCTGCTTATGTGGGATaGAGCTGTGTTTCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCPAYVG*SCVSVL
Trigger: GAGGACAGAAACACAGCTTCATCCCACATAAGCAGG...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCCCTGCTTATGTGGGATaGAGCTGTGTTTCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: GIILKHEPNEALNIPTGSPAYVG*SCVSVL
Trigger: GAGGACAGAAACACAGCTTCATCCCACATAAGCAGG...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTAAAGCACAAGCATTTTaGGTGTCGTTTTTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGKAQAF*VSFFCA
Trigger: GGCACAGAAAAACGACACTCAAAATGCTTGTGCTTT...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: HISISRGSGQKQQAPIILFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...CAGGATTATGGGGGCCTGCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGAAATTGGACACTTCCTaGAGTGACTCCTGCCCTAGC +
Preference number: 2 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKKLDTS*SDSCPS
Trigger: GCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCCTGAAGAGTGCTAGCTaGGGAAGCACTGAATTAGGG +
Preference number: 2 (lower is better)
Translates to: GIILKHEPNEALNIPTGSLKSAS*GSTELG
Trigger: CCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAG...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp CATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGGCCGTAGATACTTTCTaGTCCAAAATCTGGTTTAAA +
Preference number: 2 (lower is better)
Translates to: HISISRGSGQKQQAPIILAVDTF*SKIWFK
Trigger: TTTAAACCAGATTTTGGAGCAGAAAGTATCTACGGC...CAGGATTATGGGGGCCTGCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCTCTTTAAGTATGGGTaGGGTGTTAAGCTAAATTTA +
Preference number: 2 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSLFKYG*GVKLNL
Trigger: TAAATTTAGCTTAACACCCCACCCATACTTAAAGAG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCTCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 2 (lower is better)
Translates to: GIILKHEPNEALNIPTGSSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAACTATTACATGCTGGTaGAGTAAGCTGGCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQTITCW*SKLAWK
Trigger: TTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGT...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTGTAAGCTTTACATCTaGAGCAATTCATGCTTACTG +
Preference number: 2 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQCKLYI*SNSCLL
Trigger: CAGTAAGCATGAATTGCTTCAGATGTAAAGCTTACA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCTTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCA +
Preference number: 2 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGVFTIS*ISPRTS
Trigger: TGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAAC...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSANPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR GCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 2 (lower is better)
Translates to: IILKHEPNEALNIPTGSSDEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR GCA 90 bp CATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 2 (lower is better)
Translates to: HISISRGSGQKQQAPIILSLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...CAGGATTATGGGGGCCTGCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCGCTGGTGAAGTAAGCTaGCCTGGAAATTGTCTACCA +
Preference number: 2 (lower is better)
Translates to: GIILKHEPNEALNIPTGSAGEVS*PGNCLP
Trigger: TGGTAGACAATTTCCAGGCCAGCTTACTTCACCAGC...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTTCTGTCCTCTGAGTTaGATTAGACTATTACATGCT +
Preference number: 2 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQFCPLS*IRLLHA
Trigger: AGCATGTAATAGTCTAATCCAACTCAGAGGACAGAA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGACCCTCCTGCTTATGTaGGATGAAGCTGTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKTLLLM*DEAVFL
Trigger: CAGAAACACAGCTTCATCCCACATAAGCAGGAGGGT...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 2 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTAATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: RLIKKHSVAILQLPKNILMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCTGAAGAGTGCTAGCTaGGGAAGCACTGAATTAGGG +
Preference number: 2 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINLKSAS*GSTELG
Trigger: CCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTGATACTGTAAGAGCTTaGTGCTTGAAGCCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCDTVRA*CLKPCF
Trigger: AAAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATC...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGATTCTGTCCTCTGAGTTaGATTAGACTATTACATGCT +
Preference number: 2 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGFCPLS*IRLLHA
Trigger: AGCATGTAATAGTCTAATCCAACTCAGAGGACAGAA...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTATCGTCCTGTCCAAGTaGGCAATGGTGACTATTTCT +
Preference number: 2 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCIVLSK*AMVTIS
Trigger: AGAAATAGTCACCATTGCCCACTTGGACAGGACGAT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 2 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CAA 90 bp GAAGTGGAGAGTGTGATGCTTGTATATCATCAAGCCTTAGCTGTATaGTCATTTTGGAGCTGCATACCTCTCAAAACCATGGGCTTATGT +
Preference number: 2 (lower is better)
Translates to: EVESVMLVYHQALAV*SFWSCIPLKTMGLC
Trigger: ACATAAGCCCATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAATACAGCTAAGGCTTGATGATATACAAGCATCACACTCTCCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGACAGCTCTGTTTTCCTaGGAGATGGCCTTTAGGGTA +
Preference number: 2 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLTALFS*EMAFRV
Trigger: TACCCTAAAGGCCATCTCTCAGGAAAACAGAGCTGT...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 2 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATTTTGCTTCACTAGGATaGTATTTTACTAATGCGTTC +
Preference number: 2 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHFASLG*YFTNAF
Trigger: GAACGCATTAGTAAAATAGCATCCTAGTGAAGCAAA...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTTTTGCTTCACTAGGATaGTATTTTACTAATGCGTTC +
Preference number: 2 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGFASLG*YFTNAF
Trigger: GAACGCATTAGTAAAATAGCATCCTAGTGAAGCAAA...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTTTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGC +
Preference number: 2 (lower is better)
Translates to: IILKHEPNEALNIPTGSSFHNSV*SQAGRC
Trigger: GCACCTACCGGCTTGAGAGCACACTGAATTATGGAA...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR GCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 2 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 2 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTTCACTTTCATAAATTaGACACTTCCTGCAGTGACT +
Preference number: 2 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAFTFIN*TLPAVT
Trigger: AGTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTGCTGGTGAAGTAAGCTaGCCTGGAAATTGTCTACCA +
Preference number: 2 (lower is better)
Translates to: IILKHEPNEALNIPTGSSAGEVS*PGNCLP
Trigger: TGGTAGACAATTTCCAGGCCAGCTTACTTCACCAGC...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATCTTCCTGTCTTTGTGTaGTCACATCACATCGGGGGA +
Preference number: 2 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYLPVFV*SHHIGG
Trigger: TCCCCCGATGTGATGTGACCACACAAAGACAGGAAG...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CAA 90 bp AATCTTTCACCATCTTTAATTTCAGCATCTCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAATGCTTGGCCCAAATTATCTTTCCA +
Preference number: 2 (lower is better)
Translates to: NLSPSLISASPIAFR*ACWTSECLAQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAATTAAAGATGGTGAAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTCCTGCTTATGTGGGATaGAGCTGTGTTTCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: NFISSNAQNIHGFVELASPAYVG*SCVSVL
Trigger: GAGGACAGAAACACAGCTTCATCCCACATAAGCAGG...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATAAGGCTACCAAGGCTTaGGGAATTCTGTACTTACTC +
Preference number: 2 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINKATKA*GILYLL
Trigger: GAGTAAGTACAGAATTCCTCAAGCCTTGGTAGCCTT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTACCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 2 (lower is better)
Translates to: RLIKKHSVAILQLPKNILPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTAAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: RLIKKHSVAILQLPKNILSHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINLSCRS*GLKVFS
Trigger: GGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCCTGAAGAGTGCTAGCTaGGGAAGCACTGAATTAGGG +
Preference number: 2 (lower is better)
Translates to: LYISEKYRPEELNSCSVFLKSAS*GSTELG
Trigger: CCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAG...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTCTGGACAGTAGAGGGTaGATATCCTCACTGAGTGGA +
Preference number: 2 (lower is better)
Translates to: NFISSNAQNIHGFVELASLDSRG*ISSLSG
Trigger: TCCACTCAGTGAGGATATGCACCCTCTACTGTCCAG...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 2 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCCWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTACTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: RLIKKHSVAILQLPKNILLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCTTCACTTTCATAAATTaGACACTTCCTGCAGTGACT +
Preference number: 2 (lower is better)
Translates to: SVAIQTSSPESDQKICLGFTFIN*TLPAVT
Trigger: AGTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAA...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 2 (lower is better)
Translates to: IILKHEPNEALNIPTGSSGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTTGCTCAGAATATACATaGTTTTGTGGAACTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCCSEYT*FCGTGF
Trigger: GAAGCCAGTTCCACAAAACCATGTATATTCTGAGCA...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTGGTGCATATCCTCACTaGGTGGAGCTCAGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: NFISSNAQNIHGFVELASGAYPH*VELRKE
Trigger: TTCTTTTCTGAGCTCCACTCAGTGAGGATATGCACC...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCTGTAAGCTTTACATCTaGAGCAATTCATGCTTACTG +
Preference number: 2 (lower is better)
Translates to: GIILKHEPNEALNIPTGSCKLYI*SNSCLL
Trigger: CAGTAAGCATGAATTGCTTCAGATGTAAAGCTTACA...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTAAGCCGGTAGGTGCTTaGATGCCAAATACGTACTGT +
Preference number: 2 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIKPVGA*MPNTYC
Trigger: ACAGTACGTATTTGGCATTCAAGCACCTACCGGCTT...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR TCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: LYISEKYRPEELNSCSVFSHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGCCATTTCAAAGCCCCTaGTCTGAAACTGATGTCACT +
Preference number: 2 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRPFQSP*SETDVT
Trigger: AGTGACATCAGTTTCAGAGCAGGGGCTTTGAAATGG...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
3UTR-3UTR GCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTATACTGTTTGCATGCTaGAAAGCTAAGGAAACAATG +
Preference number: 2 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCILFAC*KAKETM
Trigger: CATTGTTTCCTTAGCTTTGCAGCATGCAAACAGTAT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCCCCTCCATTCCCAACTaGAAGCCAGTAGTTCACTTA +
Preference number: 2 (lower is better)
Translates to: LYISEKYRPEELNSCSVFPSIPN*KPVVHL
Trigger: TAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGG...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCTTGAAAATCCACCCATaGAAACTTGTACTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: GIILKHEPNEALNIPTGSLKIHP*KLVLPF
Trigger: AAAGGGAAGTACAAGTTTCCATGGGTGGATTTTCAA...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR CAA 90 bp GAGTGTGATGCTTGTATATCATCAAGCCTTAGCTGTATTGTCATTTaGGAGCTGCATACCTCTCAAAACCATGGGCTTATGTACATTTAT +
Preference number: 2 (lower is better)
Translates to: ECDACISSSLSCIVI*ELHTSQNHGLMYIY
Trigger: ATAAATGTACATAAGCCCATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAATACAGCTAAGGCTTGATGATATACAAGCATCACACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTTGTGTTTCTGTCCTCTaGGTTGGATTAGACTATTAC +
Preference number: 2 (lower is better)
Translates to: IILKHEPNEALNIPTGSSCVSVL*VGLDYY
Trigger: GTAATAGTCTAATCCAACTCAGAGGACAGAAACACA...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTAAGGCTACCAAGGCTTaGGGAATTCTGTACTTACTC +
Preference number: 2 (lower is better)
Translates to: NFISSNAQNIHGFVELASKATKA*GILYLL
Trigger: GAGTAAGTACAGAATTCCTCAAGCCTTGGTAGCCTT...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCAACCTAATGAAGCCCTaGACATACCAACAGGTAGCA +
Preference number: 2 (lower is better)
Translates to: LYISEKYRPEELNSCSVFNLMKP*TYQQVA
Trigger: TGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTAACCTAATGAAGCCCTaGACATACCAACAGGTAGCA +
Preference number: 2 (lower is better)
Translates to: NFISSNAQNIHGFVELASNLMKP*TYQQVA
Trigger: TGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTT...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATG +
Preference number: 2 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYTANVV*VCFKHM
Trigger: CATATGTTTGAAGCACACTCAGACTACATTCGCTGT...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR GCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 2 (lower is better)
Translates to: LYISEKYRPEELNSCSVFASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGAAAGTGTCAGCTGTGTaGAAAGATAGTGATTGTTTG +
Preference number: 2 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLKVSAV*KDSDCL
Trigger: CAAACAATCACTATCTTTTCACACAGCTGACACTTT...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTAAAGCACAAGCATTTTaGGTGTCGTTTTTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: NFISSNAQNIHGFVELASKAQAF*VSFFCA
Trigger: GGCACAGAAAAACGACACTCAAAATGCTTGTGCTTT...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACTTATCCGTGGGTTCATaGTTCAAAGTGAGAACTAAG +
Preference number: 2 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYLSVGS*FKVRTK
Trigger: CTTAGTTCTCACTTTGAATCATGAACCCACGGATAA...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
3UTR-3UTR TCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATCAAGGATCAGGCTGCTaGGGGAATAAATTTAATCAA +
Preference number: 2 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYQGSGC*GNKFNQ
Trigger: TTGATTAAATTTATTCCCTCAGCAGCCTGATCCTTG...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR GCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 2 (lower is better)
Translates to: NFISSNAQNIHGFVELASVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR TCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATAAAGTGTCAGCTGTGTaGAAAGATAGTGATTGTTTG +
Preference number: 2 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYKVSAV*KDSDCL
Trigger: CAAACAATCACTATCTTTTCACACAGCTGACACTTT...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 2 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 72 bp CAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATaGCCAGTCGGCTCAAGGGGCCAAGGATCAGGCTGC +
Preference number: 3 (lower is better)
Translates to: QLGPAVSRAPSR*PVGSRGQGSGC
Trigger: GCAGCCTGATCCTTGGCCCCTTGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR GCA 72 bp TCGATGATGCAACCAACTTGGTCCAGCTGTATCACGTaGTCCATCCAGATGGCCAGTCGGCTCAAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: SMMQPTWSSCIT*SIQMASRLKGP
Trigger: TGGCCCCTTGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGCCCAACTGCCACACCTaGATAGTCCTGTCCAAAGAG +
Preference number: 3 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVPNCHT*IVLSKE
Trigger: CTCTTTGGACAGGACTATCAAGGTGTGGCAGTTGGG...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR CAA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCAACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 3 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 3 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 3 (lower is better)
Translates to: SGQKQQAPIILCMMQALLADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTGTAAGAGCTTGCTGCTaGAAGCCCTGCTTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: NWTLPAVTPALAASRSWCVRACC*KPCFSK
Trigger: TTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTAC...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 3 (lower is better)
Translates to: NWTLPAVTPALAASRSWCGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGCTTGTTGTCTCTGACTaGAAAATCCACCCATGGAAA +
Preference number: 3 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGLVVSD*KIHPWK
Trigger: TTTCCATGGGTGGATTTTCAAGTCAGAGACAACAAG...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR CAA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAAGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 3 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTEGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR CAA 90 bp TGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCAGGTTCCTCCCGACCCAAAGCGACATTGTTaGACCCTCTTAGACTGGCCA +
Preference number: 3 (lower is better)
Translates to: WPKLSFHWHPWTWQVPPDPKRHC*TLLDWP
Trigger: TGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGG...GTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGATTCACTTTCATAAATaGGACACTTCCTGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: SGQKQQAPIILCMMQALLIHFHK*DTSCSD
Trigger: GTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAAT...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGAAGCTGGCCTGGAAATaGTCTACCATTAGGAATGCT +
Preference number: 3 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVKLAWK*STIRNA
Trigger: AGCATTCCTAATGGTAGACAATTTCCAGGCCAGCTT...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTCCACCCATGGAAACTaGTACTTCCCTTTCATAATG +
Preference number: 3 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVSTHGN*YFPFIM
Trigger: CATTATGAAAGGGAAGTACAAGTTTCCATGGGTGGA...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR TCA 72 bp CACGCCTTTCTCATGTCCTTCCAAAGTGAAGTTTGGTaGCGAAGAGCCCAACTGCCACACCTTGATAGTCCT +
Preference number: 3 (lower is better)
Translates to: HAFLMSFQSEVW*RRAQLPHLDSP
Trigger: AGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTCACCAAACTTCACTTTGGAAGGACATGAGAAAGGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR GCA 72 bp CCACGCACCATACCCTCTCCATTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGCTTGAATGCCAAATAC +
Preference number: 3 (lower is better)
Translates to: PRTIPSPFHNSV*SQAGRCLNAKY
Trigger: GTATTTGGCATTCAAGCACCTACCGGCTTGAGAGCACACTGAATTATGGAATGGAGAGGGTATGGTGCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR CCA 72 bp ACCCTTTCATTCTCAGAATCGATGATGCAACCAACTTaGTCCAGCTGTATCACGTGCTCCATCCAGATGGCC +
Preference number: 3 (lower is better)
Translates to: TLSFSESMMQPT*SSCITCSIQMA
Trigger: GGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATCGATTCTGAGAATGAAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGATACTGGGAGGGAAGTTaGAGTACTTACTTAGCTTTT +
Preference number: 3 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGYWEGS*STYLAF
Trigger: AAAAGCTAAGTAAGTACTCAAACTTCCCTCCCAGTA...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGCAAATTATCTTTCCATaGGCATCCATGGACATGGCA +
Preference number: 3 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRQIIFP*ASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTG...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 3 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTAAGTCTGGTGTGTTTTaGTGTTACCAAATAGGGCAA +
Preference number: 3 (lower is better)
Translates to: NWTLPAVTPALAASRSWCKSGVF*CYQIGQ
Trigger: TTGCCCTATTTGGTAACACAAAAACACACCAGACTT...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCAAAGTCAAAAGTTAGTTaGGTAACTCTTAGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSKSKVS*VTLSLQ
Trigger: CTGGAGGCTAAGAGTTACCAAACTAACTTTTGACTT...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 72 bp GTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCTAATGATGTTCAATTC +
Preference number: 3 (lower is better)
Translates to: VPPHDSCLVFQD*NQQGIANDVQF
Trigger: GAATTGAACATCATTAGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 72 bp CATAGCCCAAAGCGACATTGTTTGACCCTCTTAGACTaGCCACGCACCATACCCTCTCCATTCCATAATTCA +
Preference number: 3 (lower is better)
Translates to: HSPKRHCLTLLD*PRTIPSPFHNS
Trigger: TGAATTATGGAATGGAGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGGGCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR CCA 72 bp CTCTTCATTTGGCGTGACAAGTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGTTTCCTTCACCCATTC +
Preference number: 3 (lower is better)
Translates to: LFIWRDKWVLFG*PQISMCFLHPF
Trigger: GAATGGGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCACGCCAAATGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGATTCACTTTCATAAATaGGACACTTCCTGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRIHFHK*DTSCSD
Trigger: GTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAAT...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 3 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 3 (lower is better)
Translates to: NWTLPAVTPALAASRSWCIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR GCA 72 bp CATGTCATCCGCTCCTGTCACAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCGAACAGGAAGATCACA +
Preference number: 3 (lower is better)
Translates to: HVIRSCHNPILP*NKLCSSNRKIT
Trigger: TGTGATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTTGTGACAGGAGCGGATGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR GCA 72 bp CCCATTGCTTTTAGGTTGGCCTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTTCCATTGGCATCCATG +
Preference number: 3 (lower is better)
Translates to: PIAFRLACWTSE*LAQIIFPLASM
Trigger: CATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 3 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR TCA 72 bp TGTCCCAGTCATAGAAGGCTAAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGCCGTAGATACTTTCTG +
Preference number: 3 (lower is better)
Translates to: CPSHRRLSHLQI*LPIRSRRRYFL
Trigger: CAGAAAGTATCTACGGCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCTTAGCCTTCTATGACTGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR GCA 72 bp CCATTCCATAATTCAGTGTGCTCTCAAGCCGGTAGGTaGTTGAATGCCAAATACGTACTGTTCCATCTTCTG +
Preference number: 3 (lower is better)
Translates to: PFHNSVCSQAGR*LNAKYVLFHLL
Trigger: CAGAAGATGGAACAGTACGTATTTGGCATTCAAGCACCTACCGGCTTGAGAGCACACTGAATTATGGAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR GCA 72 bp AAACGATGCTCAGGATCTGTGGATACTGTAAGAGCTTaGTGCTTGAAGCCCTGCTTTTCCAAAAAGTGTGCA +
Preference number: 3 (lower is better)
Translates to: KRCSGSVDTVRA*CLKPCFSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATCCACAGATCCTGAGCATCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 72 bp TTGCTTTTAGGTTGGCCTGCTGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCATTGGCATCCATGGACA +
Preference number: 3 (lower is better)
Translates to: LLLGWPAGLLNA*PKLSFHWHPWT
Trigger: TGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCTGGCCTGGAAATaGTCTACCATTAGGAATGCT +
Preference number: 3 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQKLAWK*STIRNA
Trigger: AGCATTCCTAATGGTAGACAATTTCCAGGCCAGCTT...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCTTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: GIILKHEPNEALNIPTGSFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 3 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 3 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 72 bp CTGGGTTGGATGAACAGCAATACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATGAACTCTCTCCAGAGT +
Preference number: 3 (lower is better)
Translates to: LGWMNSNTANVV*VCFKHMNSLQS
Trigger: ACTCTGGAGAGAGTTCATATGTTTGAAGCACACTCAGACTACATTCGCTGTATTGCTGTTCATCCAACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR TCA 72 bp CAATCGCCTACCCAAAGCCCTGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCAAAGGCATCTTCAATG +
Preference number: 3 (lower is better)
Translates to: QSPTQSPVFTIS*ISPRTSKASSM
Trigger: CATTGAAGATGCCTTTGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAACAGGGCTTTGGGTAGGCGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 72 bp AGGTTTCCCATCAAGTTCCTGTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCCCTCTTCCATGACATT +
Preference number: 3 (lower is better)
Translates to: RFPIKFLLSCRS*GLKVFSLFHDI
Trigger: AATGTCATGGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAACAGGAACTTGATGGGAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 72 bp ATTTCAGCATCTCCCATTGCTTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCCCAAATTATCTTTCCA +
Preference number: 3 (lower is better)
Translates to: ISASPIAFRLAC*TSECLAQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGTTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 3 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGLLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 3 (lower is better)
Translates to: GIILKHEPNEALNIPTGSADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCGCACCCTCTGCTAGCTaGTTCACCATATTAGCATTT +
Preference number: 3 (lower is better)
Translates to: GIILKHEPNEALNIPTGSAPSAS*FTILAF
Trigger: AAATGCTAATATGGTGAACAAGCTAGCAGAGGGTGC...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCRVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 72 bp AGTGATTTAAATGCTGCACATAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCCAGTGGTCCACAGCAT +
Preference number: 3 (lower is better)
Translates to: SDLNAAHKLFLR*CGHCAPSGPQH
Trigger: ATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAGAGTTTATGTGCAGCATTTAAATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 72 bp CAGGCATTATACTTAAGCATGAACCTAATGAAGCCCTaGACATACCAACAGGTAGCAGTCCAGTTAAGCTCT +
Preference number: 3 (lower is better)
Translates to: QALYLSMNLMKP*TYQQVAVQLSS
Trigger: AGAGCTTAACTGGACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 72 bp ATAATCCCATATTTTAACAAGACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTCCCCACCACTGTAGTA +
Preference number: 3 (lower is better)
Translates to: IIPYFNKTVICT*NEVWLVPTTVV
Trigger: TACTACAGTGGTGGGGACAAGCCATACCTCATTTCAGGTGCAGATGACCGTCTTGTTAAAATATGGGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGCTGTATTGTCATTTaGGAGCTGCATACCTCTCAA +
Preference number: 3 (lower is better)
Translates to: GIILKHEPNEALNIPTGSSCIVI*ELHTSQ
Trigger: TTGAGAGGTATGCAGCTCCAAAATGACAATACAGCT...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATGATGATGCAACCAACTaGGTCCAGCTGTATCACGTG +
Preference number: 3 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYDDATN*VQLYHV
Trigger: CACGTGATACAGCTGGACCAAGTTGGTTGCATCATC...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 72 bp CTAGATAACATTAAACCCTTTCATTCTCAGAATCGATaGTGCAACCAACTTGGTCCAGCTGTATCACGTGCT +
Preference number: 3 (lower is better)
Translates to: LDNIKPFHSQNR*CNQLGPAVSRA
Trigger: AGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATCGATTCTGAGAATGAAAGGGTTTAATGTTATCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCTACTGGGAGGGAAGTTaGAGTACTTACTTAGCTTTT +
Preference number: 3 (lower is better)
Translates to: GIILKHEPNEALNIPTGSYWEGS*STYLAF
Trigger: AAAAGCTAAGTAAGTACTCAAACTTCCCTCCCAGTA...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 3 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 3 (lower is better)
Translates to: LYISEKYRPEELNSCSVFTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAAGTCTGGTGTGTTTTaGTGTTACCAAATAGGGCAA +
Preference number: 3 (lower is better)
Translates to: GIILKHEPNEALNIPTGSKSGVF*CYQIGQ
Trigger: TTGCCCTATTTGGTAACACAAAAACACACCAGACTT...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCA +
Preference number: 3 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINWTSEC*AQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTGTAAGAGCTTGCTGCTaGAAGCCCTGCTTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIVRACC*KPCFSK
Trigger: TTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTAC...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYRVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 3 (lower is better)
Translates to: NFISSNAQNIHGFVELASGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTAGAATATACATGGTTTaGTGGAACTGGCTTCTATCC +
Preference number: 3 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVRIYMV*WNWLLS
Trigger: GGATAGAAGCCAGTTCCACAAAACCATGTATATTCT...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 72 bp AGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTaGCCTGGAAATTGTCTACCATTAGGAATGCTGTTT +
Preference number: 3 (lower is better)
Translates to: SWIRLLHAGEVS*PGNCLPLGMLF
Trigger: AAACAGCATTCCTAATGGTAGACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGTGTTGCTCTCTCTTATaGCATACTCTGAAGAATCGT +
Preference number: 3 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLCCSLL*HTLKNR
Trigger: ACGATTCTTCAGAGTATGCAATAAGAGAGAGCAACA...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 72 bp TTTCGTAGGCTACAAGGATATTTGAGTGCCTGGTTATaGATTTCTCAAATCATGTTAGATGAGCGTACGGTT +
Preference number: 3 (lower is better)
Translates to: FRRLQGYLSAWL*ISQIMLDERTV
Trigger: AACCGTACGCTCATCTAACATGATTTGAGAAATTCATAACCAGGCACTCAAATATCCTTGTAGCCTACGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 72 bp ACTCTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTaGTCCACAGCATTTACATATAAAAATCTAAGAAGT +
Preference number: 3 (lower is better)
Translates to: TLLKMMWALCSQ*STAFTYKNLRS
Trigger: ACTTCTTAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 72 bp CATGTAAGCTTTACATCTGAAGCAATTCATGCTTACTaGGAGGGAAGTTTGAGTACTTACTTAGCTTTTCCT +
Preference number: 3 (lower is better)
Translates to: HVSFTSEAIHAY*EGSLSTYLAFP
Trigger: AGGAAAAGCTAAGTAAGTACTCAAACTTCCCTCCCAGTAAGCATGAATTGCTTCAGATGTAAAGCTTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CCA 72 bp TATTGTCATTTTGGAGCTGCATACCTCTCAAAACCATaGGCTTATGTACATTTATCTGTAAGTGCTGAGAGT +
Preference number: 3 (lower is better)
Translates to: YCHFGAAYLSKP*AYVHLSVSAES
Trigger: ACTCTCAGCACTTACAGATAAATGTACATAAGCCCATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTAATTCACTTTCATAAATaGGACACTTCCTGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: RLIKKHSVAILQLPKNILIHFHK*DTSCSD
Trigger: GTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAAT...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATTGTTGCTCTCTCTTATaGCATACTCTGAAGAATCGT +
Preference number: 3 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYCCSLL*HTLKNR
Trigger: ACGATTCTTCAGAGTATGCAATAAGAGAGAGCAACA...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 3 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR TCA 72 bp ATTATAGTATTACTCATCACATGTAAGCTTTACATCTaGAGCAATTCATGCTTACTGGGAGGGAAGTTTGAG +
Preference number: 3 (lower is better)
Translates to: IIVLLITCKLYI*SNSCLLGGKFE
Trigger: CTCAAACTTCCCTCCCAGTAAGCATGAATTGCTTCAGATGTAAAGCTTACATGTGATGAGTAATACTATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGGAACGCAGGGAAGGCTaGAGAGTGCTAGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKERREG*RVLAAE
Trigger: TTCCGCAGCTAGCACTCTTCAGCCTTCCCTGCGTTC...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTCGTGCTCCATCCAGATaGCCAGTCGGCTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCRAPSR*PVGSRG
Trigger: GCCCCTTGAGCCGACTGGCCATCTGGATGGAGCACG...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCACGTGCTCCATCCAGATaGCCAGTCGGCTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSRAPSR*PVGSRG
Trigger: GCCCCTTGAGCCGACTGGCCATCTGGATGGAGCACG...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGCGTGCTCCATCCAGATaGCCAGTCGGCTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQRAPSR*PVGSRG
Trigger: GCCCCTTGAGCCGACTGGCCATCTGGATGGAGCACG...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGTCGCAGAGGCATGGCTaGGTCGGTCCAATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRSQRHG*VGPIPG
Trigger: TCCCGGGATTGGACCGACGCAGCCATGCCTCTGCGA...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCATGCCCAGCATGGCTaGGTCGGTCCAATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSHAQHG*VGPIPG
Trigger: TCCCGGGATTGGACCGACGCAGCCATGCTGGGCATG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514508.2
CDS-3UTR CCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGCGTGCTCCATCCAGATaGCCAGTCGGCTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVRAPSR*PVGSRG
Trigger: GCCCCTTGAGCCGACTGGCCATCTGGATGGAGCACG...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGGGCCTGCTGGACTTCTaGATGCTTGGCCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKGLLDF*MLGPNY
Trigger: ATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCC...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGGAGCACTGGAAGGGCTaGGCTGCATCTGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVEHWKG*AASEVF
Trigger: GAACACCTCAGATGCAGCTCAGCCCTTCCAGTGCTC...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTCGCAGAGGCATGGCTaGGTCGGTCCAATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTSQRHG*VGPIPG
Trigger: TCCCGGGATTGGACCGACGCAGCCATGCCTCTGCGA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333188.10
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCAGGGCCGGAGCGCCTaGGCAAACTGCGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYQGRSA*ANCAQG
Trigger: GCCCTGCGCGCAGTTTGCGCAGGCGCTCCGGCCCTG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGAAGCCGGTAGGTGCTTaGATGCCAAATACGTACTGT +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKKPVGA*MPNTYC
Trigger: ACAGTACGTATTTGGCATTCAAGCACCTACCGGCTT...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGGCCCATGCAAACTCCTaGGCAGATCCAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SGQKQQAPIILCMMQALLAHANS*ADPKLL
Trigger: CAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGC...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGCAGAGGCGTCAGACTaGCTGACGTGGAACTTCCGG +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSAEASD*LTWNFR
Trigger: CCGGAAGTTCCACGTCAGTCAGTCTGACGCCTCTGC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507777.6
CDS-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGGGTGCATATCCTCACTaGGTGGAGCTCAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKGAYPH*VELRKE
Trigger: TTCTTTTCTGAGCTCCACTCAGTGAGGATATGCACC...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAGACCGTCAGACTGACTaGCGTGGAACTTCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVDRQTD*RGTSGS
Trigger: GCTCCCGGAAGTTCCACGTCAGTCAGTCTGACGGTC...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503326.6
CDS-3UTR GCA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAGAATCGTGGGCCCATaGAAACTCCTGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGRIVGP*KLLSRS
Trigger: GGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCT...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCATGAAGTCCATGGCTaGGTCGGTCCAATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSHEVHG*VGPIPG
Trigger: TCCCGGGATTGGACCGACGCAGCCATGGACTTCATG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512242.6
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCAAGTCGCAGAGGCATaGCTGCGTCGGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSQVAEA*LRRSNP
Trigger: GGGATTGGACCGACGCAGCCATGCCTCTGCGACTTG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333188.10
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGATGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 4 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKWVLFG*PQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCA...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGAGCCCCTTTGTTCTTTaGAGCACTGGAAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SGQKQQAPIILCMMQALLSPFVL*STGRAE
Trigger: CTCAGCCCTTCCAGTGCTCCAAAGAACAAAGGGGCT...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGCCCTCCATTCCCAACTaGAAGCCAGTAGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKPSIPN*KPVVHL
Trigger: TAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGG...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTCTACCATGCCCAGCATaGCTGCGTCGGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTLPCPA*LRRSNP
Trigger: GGGATTGGACCGACGCAGCCATGCTGGGCATGGTAG...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514508.2
CDS-3UTR TCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGTGTGCCCTCCAGCGATaGGATGGCAAATGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRCALQR*DGKWWE
Trigger: TTCCCACCATTTGCCATCTCATCGCTGGAGGGCACA...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGAAGGCTACCAAGGCTTaGGGAATTCTGTACTTACTC +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKKATKA*GILYLL
Trigger: GAGTAAGTACAGAATTCCTCAAGCCTTGGTAGCCTT...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGACCGTCAGACTGACTaGCGTGGAACTTCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQDRQTD*RGTSGS
Trigger: GCTCCCGGAAGTTCCACGTCAGTCAGTCTGACGGTC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR GCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGTTGAACACTCTAATCTaGATGTCATCCGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKLNTLI*MSSAPV
Trigger: GACAGGAGCGGATGACATGCAGATTAGAGTGTTCAA...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVDEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTCGTCCAGGCTGGAGTaGAGTGGCGAAGTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQSSRLE*SGEVSL
Trigger: GAGCGAGACTTCGCCACTGCACTCCAGCCTGGACGA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR CCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGTTGACCCTCTTAGACTaGCCACGCACCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQLTLLD*PRTIPS
Trigger: AGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAA...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGATCTGGACCTACCATaGCTGCGTCGGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSDLDLP*LRRSNP
Trigger: GGGATTGGACCGACGCAGCCATGGTAGGTCCAGATC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510181.6
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCATCTGCACCTGAAATaGGGTATGGCTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSHLHLK*GMACPH
Trigger: GTGGGGACAAGCCATACCTCATTTCAGGTGCAGATG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGCATCTGCACCTGAAATaGGGTATGGCTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQHLHLK*GMACPH
Trigger: GTGGGGACAAGCCATACCTCATTTCAGGTGCAGATG...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTGGCCTGCTGGACTTCTaGATGCTTGGCCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCGLLDF*MLGPNY
Trigger: ATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCC...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGCCCATGCAAACTCCTaGGCAGATCCAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSAHANS*ADPKLL
Trigger: CAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCAGGGCTGAGCTGCATCTaGGGTGTTCAAGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPGLSCI*GVQATN
Trigger: GTTGGTGGCTTGAACACCTCAGATGCAGCTCAGCCC...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGCCTGCTTATGTGGGATaGAGCTGTGTTTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQPAYVG*SCVSVL
Trigger: GAGGACAGAAACACAGCTTCATCCCACATAAGCAGG...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGCCTGCTTATGTGGGATaGAGCTGTGTTTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVPAYVG*SCVSVL
Trigger: GAGGACAGAAACACAGCTTCATCCCACATAAGCAGG...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTCGCAGAGGCATGGCTaGGTCGGTCCAATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSASQRHG*VGPIPG
Trigger: TCCCGGGATTGGACCGACGCAGCCATGCCTCTGCGA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333188.10
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGGCACAAGACACATTTTaGGCATGTCCTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGAQDTF*ACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGC...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTTCCATTGGCATCCATaGACATGGCAGGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSFHWHP*TWQVPP
Trigger: GGGAGGAACCTGCCATGTCCATGGATGCCAATGGAA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGATTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGCCCTCCATTCCCAACTaGAAGCCAGTAGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: SGQKQQAPIILCMMQALLPSIPN*KPVVHL
Trigger: TAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGG...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGCTGCAAACCACAGGCTaGACAGTAGAGGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVLQTTG*TVEGAY
Trigger: ATATGCACCCTCTACTGTCCAGCCTGTGGTTTGCAG...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCGGCTACTCAGGCCTTaGGATAAACCCACCGATCCA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQRLLRP*DKPTDP
Trigger: TGGATCGGTGGGTTTATCTCAAGGCCTGAGTAGCCG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVTVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGAAGCCGGTAGGTGCTTaGATGCCAAATACGTACTGT +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQKPVGA*MPNTYC
Trigger: ACAGTACGTATTTGGCATTCAAGCACCTACCGGCTT...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGACCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCACCAAGTGGGCAATGGTaGCTATTTCTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSPSGQW*LFLLQH
Trigger: ATGTTGGAGGAGAAATAGTCACCATTGCCCACTTGG...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTCACGCCTTTCTCATGTCCTTCCAAAGTGAAGTTTGGTGACGAAGAGCCCAACGGGCTGAGCTGCATCTaGGGTGTTCAAGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: FTPFSCPSKVKFGDEEPNGLSCI*GVQATN
Trigger: GTTGGTGGCTTGAACACCTCAGATGCAGCTCAGCCC...GTTGGGCTCTTCGTCACCAAACTTCACTTTGGAAGGACATGAGAAAGGCGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
CDS-3UTR TCA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGTGTGTTTCTGTCCTCTaGGTTGGATTAGACTATTAC +
Preference number: 4 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKCVSVL*VGLDYY
Trigger: GTAATAGTCTAATCCAACTCAGAGGACAGAAACACA...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCTGATCTCTGCTCACTaGAACCTCTGCTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQLISAH*NLCFPG
Trigger: ACCCGGGAAGCAGAGGTTTCAGTGAGCAGAGATCAG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR TCA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGCGACCAAGCATCTTCTaGACCTGTGATAATGATTGG +
Preference number: 4 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGRPSIF*TCDNDW
Trigger: CCAATCATTATCACAGGTTCAGAAGATGCTTGGTCG...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677309.1
CDS-3UTR GCA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGCATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGGCCATTGTAAAGACTTaGCAACATCCATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SGQKQQAPIILCMMQALLAIVKT*QHPWLC
Trigger: ACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGC...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSDEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVDEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCFHNSV*SQAGRC
Trigger: GCACCTACCGGCTTGAGAGCACACTGAATTATGGAA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCAGAATCGTGGGCCCATaGAAACTCCTGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSRIVGP*KLLSRS
Trigger: GGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGGGCAGGCATCAACCTTaGCCTGTAAAAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQGRHQP*PVKSSS
Trigger: TGAGCTACTTTTTACAGGGCAAGGTTGATGCCTGCC...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTCCAGCTGTATCACGTaGTCCATCCAGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTESSCIT*SIQMAS
Trigger: ACTGGCCATCTGGATGGAGCACGTGATACAGCTGGA...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGAAATTGGACACTTCCTaGAGTGACTCCTGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVKLDTS*SDSCPS
Trigger: GCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGAGTGTCGTTTTTCTGTaGCCTCCAGCGATGAGATGG +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVSVVFL*PPAMRW
Trigger: CCATCTCATCGCTGGAGGGCACAGAAAAACGACACT...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGGGACTACAGGCGCATaGTACCATGCCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAGTTGA*YHAQHG
Trigger: GCCATGCTGGGCATGGTAGCATGCGCCTGTAGTCCC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514508.2
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAGTGGCGCTGATCTCTaGTCACTGAAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSSGADL*SLKPLL
Trigger: AAGCAGAGGTTTCAGTGAGCAGAGATCAGCGCCACT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGGGACTACAGGCGCATaGTACCATGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSGTTGA*YHAQLI
Trigger: AATTAGCTGGGCATGGTAGCATGCGCCTGTAGTCCC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512242.6
CDS-3UTR CCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGACTTGCCAACATCCATaGCTCTGTAGGATGCAGATC +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVTCQHP*LCRMQI
Trigger: GATCTGCATCCTACAGAGCCATGGATGTTGGCAAGT...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCAGCACAAGACACATTTTaGGCATGTCCTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSAQDTF*ACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGC...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTTGACCCTCTTAGACTaGCCACGCACCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: LISHAKVPPHDSCLVFQDLTLLD*PRTIPS
Trigger: AGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAA...GTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTATGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 4 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTTCCATTGGCATCCATaGACATGGCAGGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSFHWHP*TWQVPP
Trigger: GGGAGGAACCTGCCATGTCCATGGATGCCAATGGAA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGCGCATGACAGCTGTCTaGTATTCCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVRMTAV*YSRTET
Trigger: GGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCG...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCGCATGACAGCTGTCTaGTATTCCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSRMTAV*YSRTET
Trigger: GGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVWVLFG*PQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCA...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAAGCCCCTTTGTTCTTTaGAGCACTGGAAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVSPFVL*STGRAE
Trigger: CTCAGCCCTTCCAGTGCTCCAAAGAACAAAGGGGCT...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGCCTCCAGCGATGAGATaGCAAATGGTGGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQPPAMR*QMVGKC
Trigger: ACACTTTCCCACCATTTGCCATCTCATCGCTGGAGG...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCTGCAAACCACAGGCTaGACAGTAGAGGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSLQTTG*TVEGAY
Trigger: ATATGCACCCTCTACTGTCCAGCCTGTGGTTTGCAG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGCTGGAGTGCAGTaGCGAAGTCTCGCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAQAGVQ*RSLALS
Trigger: CGACAGAGCGAGACTTCGCCACTGCACTCCAGCCTG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR TCA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATG +
Preference number: 4 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGTANVV*VCFKHM
Trigger: CATATGTTTGAAGCACACTCAGACTACATTCGCTGT...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTACAAAGTGAAGTTTGGTaGCGAAGAGCCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVQSEVW*RRAQLP
Trigger: TGGCAGTTGGGCTCTTCGTCACCAAACTTCACTTTG...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGGACCTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCATCTGCACCTGAAATaGGGTATGGCTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KDLISHAKVPPHDSCLVFHLHLK*GMACPH
Trigger: GTGGGGACAAGCCATACCTCATTTCAGGTGCAGATG...GAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAGGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSTVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGATTGGCAACTCAGGATaGAAGCTGGCACAAGACACA +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRIGNSG*KLAQDT
Trigger: TGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAAT...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAGCCGGTAGGTGCTTaGATGCCAAATACGTACTGT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSKPVGA*MPNTYC
Trigger: ACAGTACGTATTTGGCATTCAAGCACCTACCGGCTT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGCCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSSHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSLVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGTAGATCTTGAGGGCTaGAAGTCTTTTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSVDLEG*KSFPSS
Trigger: GGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTAC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTGCAAGACCTGTGGAATaGTGCAATGAGGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCARPVE*CNEVKK
Trigger: TTTCTTGACCTCATTGCATCATTCCACAGGTCTTGC...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGCATTCTCAGAATCGATaGTGCAACCAACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQHSQNR*CNQLGP
Trigger: TGGACCAAGTTGGTTGCATCATCGATTCTGAGAATG...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTACTATTACATGCTGGTaGAGTAAGCTGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCTITCW*SKLAWK
Trigger: TTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGT...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCAACTTTGAGATCCCTGTaGCCACCACCCTCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPTLRSL*PPPSCL
Trigger: TAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGT...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCAAACCTAATGAAGCCCTaGACATACCAACAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSNLMKP*TYQQVA
Trigger: TGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTT...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGACCGTCAGACTGACTaGCGTGGAACTTCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYDRQTD*RGTSGS
Trigger: GCTCCCGGAAGTTCCACGTCAGTCAGTCTGACGGTC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
CDS-3UTR GCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGACATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAGCCATTGTAAAGACTTaGCAACATCCATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGAIVKT*QHPWLC
Trigger: ACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGC...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTTGAACACTCTAATCTaGATGTCATCCGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCLNTLI*MSSAPV
Trigger: GACAGGAGCGGATGACATGCAGATTAGAGTGTTCAA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSFHNSV*SQAGRC
Trigger: GCACCTACCGGCTTGAGAGCACACTGAATTATGGAA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAATGCCACATTATTTTTaGCATCTCTCTCCGCACCCT +
Preference number: 4 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGMPHYF*HLSPHP
Trigger: AGGGTGCGGAGAGAGATGGCAAAAATAATGTGGCAT...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGCAGGCATCAACCTTaGCCTGTAAAAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRGRHQP*PVKSSS
Trigger: TGAGCTACTTTTTACAGGGCAAGGTTGATGCCTGCC...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGGCAGGCATCAACCTTaGCCTGTAAAAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSGRHQP*PVKSSS
Trigger: TGAGCTACTTTTTACAGGGCAAGGTTGATGCCTGCC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGCTGAAGAGTGCTAGCTaGGGAAGCACTGAATTAGGG +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTELKSAS*GSTELG
Trigger: CCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAG...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTACTGGACAGTAGAGGGTaGATATCCTCACTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVLDSRG*ISSLSG
Trigger: TCCACTCAGTGAGGATATGCACCCTCTACTGTCCAG...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCAGTGGCGCTGATCTCTaGTCACTGAAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSSGADL*SLKPLL
Trigger: AAGCAGAGGTTTCAGTGAGCAGAGATCAGCGCCACT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR CCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGACTTGCCAACATCCATaGCTCTGTAGGATGCAGATC +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRTCQHP*LCRMQI
Trigger: GATCTGCATCCTACAGAGCCATGGATGTTGGCAAGT...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTACTTGCCAACATCCATaGCTCTGTAGGATGCAGATC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSTCQHP*LCRMQI
Trigger: GATCTGCATCCTACAGAGCCATGGATGTTGGCAAGT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTTGACCCTCTTAGACTaGCCACGCACCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQLTLLD*PRTIPS
Trigger: AGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCGCATGACAGCTGTCTaGTATTCCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSRMTAV*YSRTET
Trigger: GGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGCCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGCCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: HISISRGSGQKQQAPIILPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...CAGGATTATGGGGGCCTGCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGGTTTTCATACTCTGTTaGGTCAGCAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVVFILC*VSKGFC
Trigger: GCAGAATCCCTTGCTGACCCAACAGAGTATGAAAAC...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTCGGGGCAAGACCTGTaGAATGATGCAATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTESGQDL*NDAMRS
Trigger: TGACCTCATTGCATCATTCCACAGGTCTTGCCCCGA...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTCACATCGGGGGAAATaGGCATGTGTCAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LISHAKVPPHDSCLVFQDSHRGK*ACVKKW
Trigger: CCACTTCTTGACACATGCCCATTTCCCCCGATGTGA...GTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTAAGCCCCTTTGTTCTTTaGAGCACTGGAAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVSPFVL*STGRAE
Trigger: CTCAGCCCTTCCAGTGCTCCAAAGAACAAAGGGGCT...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGATGATGCAACCAACTTaGTCCAGCTGTATCACGTGC +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRMMQPT*SSCITC
Trigger: GCACGTGATACAGCTGGACCAAGTTGGTTGCATCAT...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGATGATGCAACCAACTTaGTCCAGCTGTATCACGTGC +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVMMQPT*SSCITC
Trigger: GCACGTGATACAGCTGGACCAAGTTGGTTGCATCAT...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGCCTCCAGCGATGAGATaGCAAATGGTGGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEPPAMR*QMVGKC
Trigger: ACACTTTCCCACCATTTGCCATCTCATCGCTGGAGG...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGCTGCAAACCACAGGCTaGACAGTAGAGGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTELQTTG*TVEGAY
Trigger: ATATGCACCCTCTACTGTCCAGCCTGTGGTTTGCAG...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCGGCTACTCAGGCCTTaGGATAAACCCACCGATCCA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSARLLRP*DKPTDP
Trigger: TGGATCGGTGGGTTTATCTCAAGGCCTGAGTAGCCG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 4 (lower is better)
Translates to: LISHAKVPPHDSCLVFQDKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...GTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTCATCTGCACCTGAAATaGGGTATGGCTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGHLHLK*GMACPH
Trigger: GTGGGGACAAGCCATACCTCATTTCAGGTGCAGATG...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQTVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTCCTCCCGACCAAGCTTAACAATGATGCTCCCTTCATCATAGCCCAAAGCGACACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: FLPTKLNNDAPFIIAQSDTVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...GTCGCTTTGGGCTATGATGAAGGGAGCATCATTGTTAAGCTTGGTCGGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAATTGGCAACTCAGGATaGAAGCTGGCACAAGACACA +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVIGNSG*KLAQDT
Trigger: TGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAAT...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCATTGGCAACTCAGGATaGAAGCTGGCACAAGACACA +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSIGNSG*KLAQDT
Trigger: TGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAAT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGATTGGCAACTCAGGATaGAAGCTGGCACAAGACACA +
Preference number: 4 (lower is better)
Translates to: HISISRGSGQKQQAPIILIGNSG*KLAQDT
Trigger: TGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAAT...CAGGATTATGGGGGCCTGCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCAAGCCGGTAGGTGCTTaGATGCCAAATACGTACTGT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSKPVGA*MPNTYC
Trigger: ACAGTACGTATTTGGCATTCAAGCACCTACCGGCTT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCAGGCCTGCTGGACTTCTaGATGCTTGGCCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPGLLDF*MLGPNY
Trigger: ATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCC...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTESHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVSHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGCAGAACTTGTGTAAATaGAGCAATCGCCTACCCAAA +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQQNLCK*SNRLPK
Trigger: TTTGGGTAGGCGATTGCTTCATTTACACAAGTTCTG...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTCCAAGTGGGCAATGGTaGCTATTTCTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTPSGQW*LFLLQH
Trigger: ATGTTGGAGGAGAAATAGTCACCATTGCCCACTTGG...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGCCAAGTGGGCAATGGTaGCTATTTCTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEPSGQW*LFLLQH
Trigger: ATGTTGGAGGAGAAATAGTCACCATTGCCCACTTGG...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGGTAGATCTTGAGGGCTaGAAGTCTTTTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEVDLEG*KSFPSS
Trigger: GGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTAC...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAGGGCTGAGCTGCATCTaGGGTGTTCAAGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQGLSCI*GVQATN
Trigger: GTTGGTGGCTTGAACACCTCAGATGCAGCTCAGCCC...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCATTCTCAGAATCGATaGTGCAACCAACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSHSQNR*CNQLGP
Trigger: TGGACCAAGTTGGTTGCATCATCGATTCTGAGAATG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAGTTAAGACAGATTGCTaGTGTAGAACCCGATTTTCC +
Preference number: 4 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGVKTDC*CRTRFS
Trigger: GGAAAATCGGGTTCTACATCAGCAATCTGTCTTAAC...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAACAGCTCTGTTTTCCTaGGAGATGGCCTTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVTALFS*EMAFRV
Trigger: TACCCTAAAGGCCATCTCTCAGGAAAACAGAGCTGT...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGGCCATTGTAAAGACTTaGCAACATCCATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVAIVKT*QHPWLC
Trigger: ACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGC...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTCCAAACACACACACTaGCATTGTAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCSKHTH*HCKDLP
Trigger: TGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSPCNKL*SSNRKI
Trigger: GATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGCCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVPCNKL*SSNRKI
Trigger: GATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGG...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCAAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSNPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTTGAACACTCTAATCTaGATGTCATCCGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSLNTLI*MSSAPV
Trigger: GACAGGAGCGGATGACATGCAGATTAGAGTGTTCAA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTCTCAAGCCGGTAGGTaGTTGAATGCCAAATACGTA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSSQAGR*LNAKYV
Trigger: TACGTATTTGGCATTCAAGCACCTACCGGCTTGAGA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGTCTCAAGCCGGTAGGTaGTTGAATGCCAAATACGTA +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVSQAGR*LNAKYV
Trigger: TACGTATTTGGCATTCAAGCACCTACCGGCTTGAGA...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTFHNSV*SQAGRC
Trigger: GCACCTACCGGCTTGAGAGCACACTGAATTATGGAA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGCTTTTCCAAAAAGTGTaGAACTCTGGTCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVLFQKV*NSGPLF
Trigger: GAACAGAGGACCAGAGTTGCACACTTTTTGGAAAAG...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGATACTGTAAGAGCTTaGTGCTTGAAGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSDTVRA*CLKPCF
Trigger: AAAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTGGCAGGCATCAACCTTaGCCTGTAAAAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTGRHQP*PVKSSS
Trigger: TGAGCTACTTTTTACAGGGCAAGGTTGATGCCTGCC...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTCCTCCCGACCAAGCTTAACAATGATGCTCCCTTCATCATAGCCCAAAGCGACAAATTGGACACTTCCTaGAGTGACTCCTGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: FLPTKLNNDAPFIIAQSDKLDTS*SDSCPS
Trigger: GCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT...GTCGCTTTGGGCTATGATGAAGGGAGCATCATTGTTAAGCTTGGTCGGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGGACCTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCAAATTGGACACTTCCTaGAGTGACTCCTGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: KDLISHAKVPPHDSCLVFKLDTS*SDSCPS
Trigger: GCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT...GAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAGGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTCGTCCAGGCTGGAGTaGAGTGGCGCTGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTSSRLE*SGADLC
Trigger: GCAGAGATCAGCGCCACTGCACTCCAGCCTGGACGA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR CCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGCAAGTCGCAGAGGCATaGCTGCGTCGGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKQVAEA*LRRSNP
Trigger: GGGATTGGACCGACGCAGCCATGCCTCTGCGACTTG...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTAGATCAAGTCGCAGAGGCATaGCTGCGTCGGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: KLLSRSKALVSQCHCCVDQVAEA*LRRSNP
Trigger: GGGATTGGACCGACGCAGCCATGCCTCTGCGACTTG...ATCTACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCACTTGCCAACATCCATaGCTCTGTAGGATGCAGATC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSTCQHP*LCRMQI
Trigger: GATCTGCATCCTACAGAGCCATGGATGTTGGCAAGT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGCACAAGACACATTTTaGGCATGTCCTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSAQDTF*ACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTTTGACCCTCTTAGACTaGCCACGCACCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGLTLLD*PRTIPS
Trigger: AGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAA...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATTTCCATTGGCATCCATaGACATGGCAGGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHFHWHP*TWQVPP
Trigger: GGGAGGAACCTGCCATGTCCATGGATGCCAATGGAA...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTTTCCATTGGCATCCATaGACATGGCAGGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGFHWHP*TWQVPP
Trigger: GGGAGGAACCTGCCATGTCCATGGATGCCAATGGAA...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGGLLNA*PKLSFH
Trigger: ATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGTTTTCATACTCTGTTaGGTCAGCAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSVFILC*VSKGFC
Trigger: GCAGAATCCCTTGCTGACCCAACAGAGTATGAAAAC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTWVLFG*PQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGATTTGGCGTGACAAGTaGGTATTGTTTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEIWRDK*VLFGWP
Trigger: TGGCCAGCCAAACAATACCCACTTGTCACGCCAAAT...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTATCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 4 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCTCACATCGGGGGAAATaGGCATGTGTCAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTSHRGK*ACVKKW
Trigger: CCACTTCTTGACACATGCCCATTTCCCCCGATGTGA...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGCATATTTCTTCAGCCTaGACAATAGAAACAGACAGG +
Preference number: 4 (lower is better)
Translates to: SGQKQQAPIILCMMQALLHISSA*TIETDR
Trigger: CCTGTCTGTTTCTATTGTCCAGGCTGAAGAAATATG...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAGCTGGTGAAGTAAGCTaGCCTGGAAATTGTCTACCA +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVAGEVS*PGNCLP
Trigger: TGGTAGACAATTTCCAGGCCAGCTTACTTCACCAGC...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTGCTGGTGAAGTAAGCTaGCCTGGAAATTGTCTACCA +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTAGEVS*PGNCLP
Trigger: TGGTAGACAATTTCCAGGCCAGCTTACTTCACCAGC...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTACCTCCAGCGATGAGATaGCAAATGGTGGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVPPAMR*QMVGKC
Trigger: ACACTTTCCCACCATTTGCCATCTCATCGCTGGAGG...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCCCTTCTACGGGATCTaGACCTACCATGGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYPFYGI*TYHGCV
Trigger: GACGCAGCCATGGTAGGTCCAGATCCCGTAGAAGGG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510181.6
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCGGCTACTCAGGCCTTaGGATAAACCCACCGATCCA +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYRLLRP*DKPTDP
Trigger: TGGATCGGTGGGTTTATCTCAAGGCCTGAGTAGCCG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTGTGCTTCAAACATATaGACTCTCTCCAGAGTATTG +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCCASNI*TLSRVL
Trigger: CAATACTCTGGAGAGAGTTCATATGTTTGAAGCACA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATG +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSTANVV*VCFKHM
Trigger: CATATGTTTGAAGCACACTCAGACTACATTCGCTGT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGAACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGTVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGCCCATGCAAACTCCTaGGCAGATCCAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAAHANS*ADPKLL
Trigger: CAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQSHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCAAGTGGGCAATGGTaGCTATTTCTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQPSGQW*LFLLQH
Trigger: ATGTTGGAGGAGAAATAGTCACCATTGCCCACTTGG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGGACCTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCCAAGTGGGCAATGGTaGCTATTTCTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: KDLISHAKVPPHDSCLVFPSGQW*LFLLQH
Trigger: ATGTTGGAGGAGAAATAGTCACCATTGCCCACTTGG...GAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAGGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSLSCRS*GLKVFS
Trigger: GGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAAAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTEKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAAGGCGTCAGACTGACTaGCGTGGAACTTCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLRRQTD*RGTSGS
Trigger: GCTCCCGGAAGTTCCACGTCAGTCAGTCTGACGCCT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507777.6
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCAGTTAGCTTTCTTTTaGTATCAAGTCGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSQLAFF*YQVAEA
Trigger: CGCCTCTGCGACTTGATATCAAAAGAAAGCTAACTG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507777.6
ENST00000510181.6
CDS-3UTR TCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAGGCTACAAGGATATTTaGGTGCCTGGTTATGAATTT +
Preference number: 4 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGGYKDI*VPGYEF
Trigger: AAATTCATAACCAGGCACTCAAATATCCTTGTAGCC...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTGAGCACTGGAAGGGCTaGGCTGCATCTGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCEHWKG*AASEVF
Trigger: GAACACCTCAGATGCAGCTCAGCCCTTCCAGTGCTC...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGAGCACTGGAAGGGCTaGGCTGCATCTGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTEHWKG*AASEVF
Trigger: GAACACCTCAGATGCAGCTCAGCCCTTCCAGTGCTC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGTTTTGTGGTGGTAATTaGGCTGGGAAAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: SGQKQQAPIILCMMQALLFCGGN*AGKNSE
Trigger: TTCTGAATTTTTCCCAGCTCAATTACCACCACAAAA...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCACAAGGATCAGGCTGCTaGGGGAATAAATTTAATCAA +
Preference number: 4 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSQGSGC*GNKFNQ
Trigger: TTGATTAAATTTATTCCCTCAGCAGCCTGATCCTTG...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAAAAGGCTACCAAGGCTTaGGGAATTCTGTACTTACTC +
Preference number: 4 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTEKATKA*GILYLL
Trigger: GAGTAAGTACAGAATTCCTCAAGCCTTGGTAGCCTT...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCACAGCTCTGTTTTCCTaGGAGATGGCCTTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTTALFS*EMAFRV
Trigger: TACCCTAAAGGCCATCTCTCAGGAAAACAGAGCTGT...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCTGATCTCTGCTCACTaGAACCTCTGCTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYLISAH*NLCFPG
Trigger: ACCCGGGAAGCAGAGGTTTCAGTGAGCAGAGATCAG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR GCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGTCGCAGAGGCATGGCTaGGTCGGTCCAATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLSQRHG*VGPIPG
Trigger: TCCCGGGATTGGACCGACGCAGCCATGCCTCTGCGA...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTGCCATTGTAAAGACTTaGCAACATCCATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTAIVKT*QHPWLC
Trigger: ACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGC...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGCCATTGTAAAGACTTaGCAACATCCATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSAIVKT*QHPWLC
Trigger: ACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTCCAAACACACACACTaGCATTGTAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSSKHTH*HCKDLP
Trigger: TGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGCCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEPCNKL*SSNRKI
Trigger: GATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGG...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSPCNKL*SSNRKI
Trigger: GATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATTGAACACTCTAATCTaGATGTCATCCGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVLNTLI*MSSAPV
Trigger: GACAGGAGCGGATGACATGCAGATTAGAGTGTTCAA...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSADEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCAGCCCATATCCTTTACTaGCAGTGGCAATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPAHILY*QWQSFT
Trigger: GGTGAAAGATTGCCACTGGCAGTAAAGGATATGGGC...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTAGAATCGTGGGCCCATaGAAACTCCTGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSARIVGP*KLLSRS
Trigger: GGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGGATACTGTAAGAGCTTaGTGCTTGAAGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEDTVRA*CLKPCF
Trigger: AAAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATC...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTGATACTGTAAGAGCTTaGTGCTTGAAGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTDTVRA*CLKPCF
Trigger: AAAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATC...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTATGCCACATTATTTTTaGCATCTCTCTCCGCACCCT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTMPHYF*HLSPHP
Trigger: AGGGTGCGGAGAGAGATGGCAAAAATAATGTGGCAT...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGGCAGGCATCAACCTTaGCCTGTAAAAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQGRHQP*PVKSSS
Trigger: TGAGCTACTTTTTACAGGGCAAGGTTGATGCCTGCC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GCTGGACTTCTGAATGCTTGGCCCAAATTATCTTTCCATTGGCATCCATGGACAATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: AGLLNAWPKLSFHWHPWTMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...TGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGCTGAAGAGTGCTAGCTaGGGAAGCACTGAATTAGGG +
Preference number: 4 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGLKSAS*GSTELG
Trigger: CCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAG...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGCTTTATAAGGCCACATaGCTAAGCTCCAAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQLYKAT*LSSKGN
Trigger: ATTCCCTTTGGAGCTTAGGCATGTGGCCTTATAAAG...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTCGTCCAGGCTGGAGTaGAGTGGCGAAGTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNSSRLE*SGEVSL
Trigger: GAGCGAGACTTCGCCACTGCACTCCAGCCTGGACGA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTGGACCTACCATGGCTaGGTCGGTCCAATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNWTYHG*VGPIPG
Trigger: TCCCGGGATTGGACCGACGCAGCCATGGTAGGTCCA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510181.6
CDS-3UTR GCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGAGCGCCTGCGCAAACTaGGCGCAGGGCCGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRSACAN*AQGRRF
Trigger: GAAACGACGGCCCTGCGCGCAGTTTGCGCAGGCGCT...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCAAGTCGCAGAGGCATaGCTGCGTCGGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYQVAEA*LRRSNP
Trigger: GGGATTGGACCGACGCAGCCATGCCTCTGCGACTTG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333188.10
ENST00000512309.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTTGACCCTCTTAGACTaGCCACGCACCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSALTLLD*PRTIPS
Trigger: AGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TGCAAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTATGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 4 (lower is better)
Translates to: CKLLSRSKALVSQCHCCVWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...TACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTTCCATTGGCATCCATaGACATGGCAGGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAFHWHP*TWQVPP
Trigger: GGGAGGAACCTGCCATGTCCATGGATGCCAATGGAA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCATCGTCCTGTCCAAGTaGGCAATGGTGACTATTTCT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSIVLSK*AMVTIS
Trigger: AGAAATAGTCACCATTGCCCACTTGGACAGGACGAT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGTTTTCATACTCTGTTaGGTCAGCAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSVFILC*VSKGFC
Trigger: GCAGAATCCCTTGCTGACCCAACAGAGTATGAAAAC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTWVLFG*PQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCA...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATTCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGTGTCAGGGTCTTAATTaGATACTTCTGGTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SGQKQQAPIILCMMQALLCQGLN*ILLVFR
Trigger: TCTAAACACCAGAAGTATCCAATTAAGACCCTGACA...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGTCGGCTCATGCTCAGAATATACATaGTTTTGTGGAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: NQLGPAVSRAPSRWPVGSCSEYT*FCGTGF
Trigger: GAAGCCAGTTCCACAAAACCATGTATATTCTGAGCA...TGAGCCGACTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCTTCCTGTCTTTGTGTaGTCACATCACATCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHLPVFV*SHHIGG
Trigger: TCCCCCGATGTGATGTGACCACACAAAGACAGGAAG...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTAACCCTCCTGCTTATGTaGGATGAAGCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVTLLLM*DEAVFL
Trigger: CAGAAACACAGCTTCATCCCACATAAGCAGGAGGGT...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCATCGGCCGTAACCTATaGGACCCCGCTCCCTTCTAC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTIGRNL*DPAPFY
Trigger: GTAGAAGGGAGCGGGGTCCCATAGGTTACGGCCGAT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510181.6
3UTR CAA 72 bp AACCCTTTCATTCTCAGAATCGATGATGCAACCAACTaGGTCCAGCTGTATCACGTGCTCCATCCAGATGGC +
Preference number: 4 (lower is better)
Translates to: NPFILRIDDATN*VQLYHVLHPDG
Trigger: GCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATCGATTCTGAGAATGAAAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCCGGCTACTCAGGCCTTaGGATAAACCCACCGATCCA +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSRLLRP*DKPTDP
Trigger: TGGATCGGTGGGTTTATCTCAAGGCCTGAGTAGCCG...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATG +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTTANVV*VCFKHM
Trigger: CATATGTTTGAAGCACACTCAGACTACATTCGCTGT...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATG +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSTANVV*VCFKHM
Trigger: CATATGTTTGAAGCACACTCAGACTACATTCGCTGT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGAGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAAAGTGAAGTTTGGTaGCGAAGAGCCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAQSEVW*RRAQLP
Trigger: TGGCAGTTGGGCTCTTCGTCACCAAACTTCACTTTG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSATVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGGCCTGCTGGACTTCTaGATGCTTGGCCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAGLLDF*MLGPNY
Trigger: ATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGCCCATGCAAACTCCTaGGCAGATCCAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYAHANS*ADPKLL
Trigger: CAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHSHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSVFTIS*ISPRTS
Trigger: TGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAAC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSALVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTTTAACTCTCCAAGCTaGAGAGCAAGCTCAAAACGA +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSFNSPS*RASSKR
Trigger: TCGTTTTGAGCTTGCTCTTCAGCTTGGAGAGTTAAA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAATTTAACTCTCCAAGCTaGAGAGCAAGCTCAAAACGA +
Preference number: 4 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTEFNSPS*RASSKR
Trigger: TCGTTTTGAGCTTGCTCTTCAGCTTGGAGAGTTAAA...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGGTAGATCTTGAGGGCTaGAAGTCTTTTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGVDLEG*KSFPSS
Trigger: GGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTAC...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQLSCRS*GLKVFS
Trigger: GGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTLSCRS*GLKVFS
Trigger: GGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAA...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGTAAGTGCTGAGAGTTaGGATGATATTTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSVSAES*DDIFRK
Trigger: CTTCCTGAAAATATCATCTCAACTCTCAGCACTTAC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGGGACATCTGTGGTCTTaGAAACATCAGTATGATTTG +
Preference number: 4 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQGHLWS*KHQYDL
Trigger: CAAATCATACTGATGTTTTCAAGACCACAGATGTCC...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGTGTGTTTCTGTCCTCTaGGTTGGATTAGACTATTAC +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVCVSVL*VGLDYY
Trigger: GTAATAGTCTAATCCAACTCAGAGGACAGAAACACA...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTACTTTGAGATCCCTGTaGCCACCACCCTCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSTLRSL*PPPSCL
Trigger: TAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGT...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGTGTGCCCTCCAGCGATaGGATGGCAAATGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKCALQR*DGKWWE
Trigger: TTCCCACCATTTGCCATCTCATCGCTGGAGGGCACA...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAAAAAGCACAAGCATTTTaGGTGTCGTTTTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTEKAQAF*VSFFCA
Trigger: GGCACAGAAAAACGACACTCAAAATGCTTGTGCTTT...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACAAAGCACAAGCATTTTaGGTGTCGTTTTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LISHAKVPPHDSCLVFQDKAQAF*VSFFCA
Trigger: GGCACAGAAAAACGACACTCAAAATGCTTGTGCTTT...GTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTAAACCTAATGAAGCCCTaGACATACCAACAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVNLMKP*TYQQVA
Trigger: TGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTT...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGACCGTCAGACTGACTaGCGTGGAACTTCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINDRQTD*RGTSGS
Trigger: GCTCCCGGAAGTTCCACGTCAGTCAGTCTGACGGTC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
CDS-3UTR GCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGTCGCAGAGGCATGGCTaGGTCGGTCCAATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRSQRHG*VGPIPG
Trigger: TCCCGGGATTGGACCGACGCAGCCATGCCTCTGCGA...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGCCATTGTAAAGACTTaGCAACATCCATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQAIVKT*QHPWLC
Trigger: ACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTCCAAACACACACACTaGCATTGTAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSSKHTH*HCKDLP
Trigger: TGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTCCAAACACACACACTaGCATTGTAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTESKHTH*HCKDLP
Trigger: TGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGA...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVNPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTCTCAAGCCGGTAGGTaGTTGAATGCCAAATACGTA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQSQAGR*LNAKYV
Trigger: TACGTATTTGGCATTCAAGCACCTACCGGCTTGAGA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCTCTCAAGCCGGTAGGTaGTTGAATGCCAAATACGTA +
Preference number: 4 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTSQAGR*LNAKYV
Trigger: TACGTATTTGGCATTCAAGCACCTACCGGCTTGAGA...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATTTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHFHNSV*SQAGRC
Trigger: GCACCTACCGGCTTGAGAGCACACTGAATTATGGAA...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRCWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSCWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGAGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGAGCCCATATCCTTTACTaGCAGTGGCAATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGAHILY*QWQSFT
Trigger: GGTGAAAGATTGCCACTGGCAGTAAAGGATATGGGC...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATGCCCATATCCTTTACTaGCAGTGGCAATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHAHILY*QWQSFT
Trigger: GGTGAAAGATTGCCACTGGCAGTAAAGGATATGGGC...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGGTATATTTCACAACTaGCCATATCCTTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSGIFHN*PYPLLP
Trigger: TGGCAGTAAAGGATATGGGCAGTTGTGAAATATACC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGGTTTCTCAATGCCATTaGTGTGTAGATGATATACTC +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVVSQCH*CVDDIL
Trigger: GAGTATATCATCTACACAGCAATGGCATTGAGAAAC...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGGCCGTAGATACTTTCTaGTCCAAAATCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVAVDTF*SKIWFK
Trigger: TTTAAACCAGATTTTGGAGCAGAAAGTATCTACGGC...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAGCCGTAGATACTTTCTaGTCCAAAATCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGAVDTF*SKIWFK
Trigger: TTTAAACCAGATTTTGGAGCAGAAAGTATCTACGGC...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCTTTTCCAAAAAGTGTaGAACTCTGGTCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSLFQKV*NSGPLF
Trigger: GAACAGAGGACCAGAGTTGCACACTTTTTGGAAAAG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTACTTTTCCAAAAAGTGTaGAACTCTGGTCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVLFQKV*NSGPLF
Trigger: GAACAGAGGACCAGAGTTGCACACTTTTTGGAAAAG...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GCTGGACTTCTGAATGCTTGGCCCAAATTATCTTTCCATTGGCATCCATGGACACTGGACAGTAGAGGGTaGATATCCTCACTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: AGLLNAWPKLSFHWHPWTLDSRG*ISSLSG
Trigger: TCCACTCAGTGAGGATATGCACCCTCTACTGTCCAG...TGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTCGTCCAGGCTGGAGTaGAGTGGCGCTGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINSSRLE*SGADLC
Trigger: GCAGAGATCAGCGCCACTGCACTCCAGCCTGGACGA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCAAGTCGCAGAGGCATaGCTGCGTCGGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINQVAEA*LRRSNP
Trigger: GGGATTGGACCGACGCAGCCATGCCTCTGCGACTTG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333188.10
ENST00000512309.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTTGACCCTCTTAGACTaGCCACGCACCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYLTLLD*PRTIPS
Trigger: AGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAATTCCATTGGCATCCATaGACATGGCAGGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQFHWHP*TWQVPP
Trigger: GGGAGGAACCTGCCATGTCCATGGATGCCAATGGAA...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGAAATTATCTTTCCATTaGCATCCATGGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVKLSFH*HPWTWQ
Trigger: CTGCCATGTCCATGGATGCCAATGGAAAGATAATTT...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSGLLNA*PKLSFH
Trigger: ATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGATCGTCCTGTCCAAGTaGGCAATGGTGACTATTTCT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQIVLSK*AMVTIS
Trigger: AGAAATAGTCACCATTGCCCACTTGGACAGGACGAT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAACGCATGACAGCTGTCTaGTATTCCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQRMTAV*YSRTET
Trigger: GGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCG...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTAGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGAATTTGGCGTGACAAGTaGGTATTGTTTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGIWRDK*VLFGWP
Trigger: TGGCCAGCCAAACAATACCCACTTGTCACGCCAAAT...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAACTTCCTGTCTTTGTGTaGTCACATCACATCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQLPVFV*SHHIGG
Trigger: TCCCCCGATGTGATGTGACCACACAAAGACAGGAAG...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATGCTGGTGAAGTAAGCTaGCCTGGAAATTGTCTACCA +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHAGEVS*PGNCLP
Trigger: TGGTAGACAATTTCCAGGCCAGCTTACTTCACCAGC...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGACCCTCCATTCCCAACTaGAAGCCAGTAGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGPSIPN*KPVVHL
Trigger: TAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGG...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCAGGCTGGAGTGCAGTaGCGAAGTCTCGCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINQAGVQ*RSLALS
Trigger: CGACAGAGCGAGACTTCGCCACTGCACTCCAGCCTG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCGGCTACTCAGGCCTTaGGATAAACCCACCGATCCA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNRLLRP*DKPTDP
Trigger: TGGATCGGTGGGTTTATCTCAAGGCCTGAGTAGCCG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCACAGTTAGCTTTCTTTTaGTATCAAGTCGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPQLAFF*YQVAEA
Trigger: TGCCTCTGCGACTTGATATCAAAAGAAAGCTAACTG...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGAGTGTCTGTGTTTCATaGTTCCAAACACACACACTG +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQSVCVS*FQTHTL
Trigger: CAGTGTGTGTGTTTGGAATCATGAAACACAGACACT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000512242.6
ENST00000514508.2
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTGTGCTTCAAACATATaGACTCTCTCCAGAGTATTG +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTCASNI*TLSRVL
Trigger: CAATACTCTGGAGAGAGTTCATATGTTTGAAGCACA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAAGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTCATCTGCACCTGAAATaGGGTATGGCTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCHLHLK*GMACPH
Trigger: GTGGGGACAAGCCATACCTCATTTCAGGTGCAGATG...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCATCTGCACCTGAAATaGGGTATGGCTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTHLHLK*GMACPH
Trigger: GTGGGGACAAGCCATACCTCATTTCAGGTGCAGATG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTACTGTTCCATCTTCTaGACCTGTGATAATGATTGG +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTYCSIF*TCDNDW
Trigger: CCAATCATTATCACAGGTTCAGAAGATGGAACAGTA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGCCCATGCAAACTCCTaGGCAGATCCAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTAHANS*ADPKLL
Trigger: CAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSASYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSASHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVVFTIS*ISPRTS
Trigger: TGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAAC...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCAGAACTTGTGTAAATaGAGCAATCGCCTACCCAAA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQQNLCK*SNRLPK
Trigger: TTTGGGTAGGCGATTGCTTCATTTACACAAGTTCTG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCCAAGTGGGCAATGGTaGCTATTTCTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAPSGQW*LFLLQH
Trigger: ATGTTGGAGGAGAAATAGTCACCATTGCCCACTTGG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TGCAAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTACTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: CKLLSRSKALVSQCHCCVLVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...TACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTTTAACTCTCCAAGCTaGAGAGCAAGCTCAAAACGA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQFNSPS*RASSKR
Trigger: TCGTTTTGAGCTTGCTCTTCAGCTTGGAGAGTTAAA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTCCTCCCGACCAAGCTTAACAATGATGCTCCCTTCATCATAGCCCAAAGCGACTTTAACTCTCCAAGCTaGAGAGCAAGCTCAAAACGA +
Preference number: 4 (lower is better)
Translates to: FLPTKLNNDAPFIIAQSDFNSPS*RASSKR
Trigger: TCGTTTTGAGCTTGCTCTTCAGCTTGGAGAGTTAAA...GTCGCTTTGGGCTATGATGAAGGGAGCATCATTGTTAAGCTTGGTCGGGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGTAGATCTTGAGGGCTaGAAGTCTTTTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAVDLEG*KSFPSS
Trigger: GGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTAC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGLSCRS*GLKVFS
Trigger: GGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAA...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTACAAGGATCAGGCTGCTaGGGGAATAAATTTAATCAA +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVQGSGC*GNKFNQ
Trigger: TTGATTAAATTTATTCCCTCAGCAGCCTGATCCTTG...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCACTTTGAGATCCCTGTaGCCACCACCCTCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSTLRSL*PPPSCL
Trigger: TAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGT...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTCCTCCCGACCAAGCTTAACAATGATGCTCCCTTCATCATAGCCCAAAGCGACGTTAAGACAGATTGCTaGTGTAGAACCCGATTTTCC +
Preference number: 4 (lower is better)
Translates to: FLPTKLNNDAPFIIAQSDVKTDC*CRTRFS
Trigger: GGAAAATCGGGTTCTACATCAGCAATCTGTCTTAAC...GTCGCTTTGGGCTATGATGAAGGGAGCATCATTGTTAAGCTTGGTCGGGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTTGTGCCCTCCAGCGATaGGATGGCAAATGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVCALQR*DGKWWE
Trigger: TTCCCACCATTTGCCATCTCATCGCTGGAGGGCACA...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGAACGCAGGGAAGGCTaGAGAGTGCTAGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLERREG*RVLAAE
Trigger: TTCCGCAGCTAGCACTCTTCAGCCTTCCCTGCGTTC...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATAAGGCTACCAAGGCTTaGGGAATTCTGTACTTACTC +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHKATKA*GILYLL
Trigger: GAGTAAGTACAGAATTCCTCAAGCCTTGGTAGCCTT...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGTGTAAGCTTTACATCTaGAGCAATTCATGCTTACTG +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRCKLYI*SNSCLL
Trigger: CAGTAAGCATGAATTGCTTCAGATGTAAAGCTTACA...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGCACTGTAGTAATCAATaGAATTCACGCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVHCSNQ*NSRLSH
Trigger: ATGAGAAAGGCGTGAATTGCATTGATTACTACAGTG...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAFHNSV*SQAGRC
Trigger: GCACCTACCGGCTTGAGAGCACACTGAATTATGGAA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTCWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GCTGGACTTCTGAATGCTTGGCCCAAATTATCTTTCCATTGGCATCCATGGACAGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: AGLLNAWPKLSFHWHPWTAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...TGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAGGTATATTTCACAACTaGCCATATCCTTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVGIFHN*PYPLLP
Trigger: TGGCAGTAAAGGATATGGGCAGTTGTGAAATATACC...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCAGAATCGTGGGCCCATaGAAACTCCTGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTRIVGP*KLLSRS
Trigger: GGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGAATCGTGGGCCCATaGAAACTCCTGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSRIVGP*KLLSRS
Trigger: GGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCT...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGTCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQSLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCSLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCACTTTTCCAAAAAGTGTaGAACTCTGGTCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPLFQKV*NSGPLF
Trigger: GAACAGAGGACCAGAGTTGCACACTTTTTGGAAAAG...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGATGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCAGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGACTCAGTCGCCATTCTaGAGCTTCCTAAAAATATTT +
Preference number: 4 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRTQSPF*SFLKIF
Trigger: AAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGT...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGATACTGTTTGCATGCTaGAAAGCTAAGGAAACAATG +
Preference number: 4 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQILFAC*KAKETM
Trigger: CATTGTTTCCTTAGCTTTGCAGCATGCAAACAGTAT...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGTCCAGCTGTATCACGTaGTCCATCCAGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKSSCIT*SIQMAS
Trigger: ACTGGCCATCTGGATGGAGCACGTGATACAGCTGGA...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCAGTGTCGTTTTTCTGTaGCCTCCAGCGATGAGATGG +
Preference number: 4 (lower is better)
Translates to: SVAIQTSSPESDQKICLGSVVFL*PPAMRW
Trigger: CCATCTCATCGCTGGAGGGCACAGAAAAACGACACT...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCTGAAGAGTGCTAGCTaGGGAAGCACTGAATTAGGG +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYLKSAS*GSTELG
Trigger: CCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTCCTCCCGACCAAGCTTAACAATGATGCTCCCTTCATCATAGCCCAAAGCGACCTTTATAAGGCCACATaGCTAAGCTCCAAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: FLPTKLNNDAPFIIAQSDLYKAT*LSSKGN
Trigger: ATTCCCTTTGGAGCTTAGGCATGTGGCCTTATAAAG...GTCGCTTTGGGCTATGATGAAGGGAGCATCATTGTTAAGCTTGGTCGGGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAACTGGACAGTAGAGGGTaGATATCCTCACTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQLDSRG*ISSLSG
Trigger: TCCACTCAGTGAGGATATGCACCCTCTACTGTCCAG...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTACTTGCCAACATCCATaGCTCTGTAGGATGCAGATC +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSATCQHP*LCRMQI
Trigger: GATCTGCATCCTACAGAGCCATGGATGTTGGCAAGT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAAACTTGCCAACATCCATaGCTCTGTAGGATGCAGATC +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQTCQHP*LCRMQI
Trigger: GATCTGCATCCTACAGAGCCATGGATGTTGGCAAGT...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGACCTGTGATAATGATTaGCAACTCAGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTETCDND*QLRMKA
Trigger: AGCTTTCATCCTGAGTTGCCAATCATTATCACAGGT...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTACCTGTGATAATGATTaGCAACTCAGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTTCDND*QLRMKA
Trigger: AGCTTTCATCCTGAGTTGCCAATCATTATCACAGGT...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCAGGTTCCTCCCGACACCTGTGATAATGATTaGCAACTCAGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: WPKLSFHWHPWTWQVPPDTCDND*QLRMKA
Trigger: AGCTTTCATCCTGAGTTGCCAATCATTATCACAGGT...GTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTTGACCCTCTTAGACTaGCCACGCACCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTLTLLD*PRTIPS
Trigger: AGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATGGCATCCATGGACATaGCAGGTTCCTCCCGACCAA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLWHPWT*QVPPDQ
Trigger: TTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACAAATTATCTTTCCATTaGCATCCATGGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: LISHAKVPPHDSCLVFQDKLSFH*HPWTWQ
Trigger: CTGCCATGTCCATGGATGCCAATGGAAAGATAATTT...GTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSGLLNA*PKLSFH
Trigger: ATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCGCATGACAGCTGTCTaGTATTCCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYRMTAV*YSRTET
Trigger: GGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTCGGGGCAAGACCTGTaGAATGATGCAATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYSGQDL*NDAMRS
Trigger: TGACCTCATTGCATCATTCCACAGGTCTTGCCCCGA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGTACCTCTCAAAACCATaGGCTTATGTACATTTATCT +
Preference number: 4 (lower is better)
Translates to: QGRLKSASCGSTELGCPQYLSKP*AYVHLS
Trigger: AGATAAATGTACATAAGCCCATGGTTTTGAGAGGTA...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCATATTTCTTCAGCCTaGACAATAGAAACAGACAGG +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSHISSA*TIETDR
Trigger: CCTGTCTGTTTCTATTGTCCAGGCTGAAGAAATATG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTCTCTTTAAGTATGGGTaGGGTGTTAAGCTAAATTTA +
Preference number: 4 (lower is better)
Translates to: NWTLPAVTPALAASRSWCLFKYG*GVKLNL
Trigger: TAAATTTAGCTTAACACCCCACCCATACTTAAAGAG...ACACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CAA 72 bp TTTCTCTCTTCATTTGGCGTGACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCATGTGTTTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: FLSSFGVTSGYC*AGHRSACVSFT
Trigger: GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCACGCCAAATGAAGAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCAGTTAGCTTTCTTTTaGTATCAAGTCGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHQLAFF*YQVAEA
Trigger: TGCCTCTGCGACTTGATATCAAAAGAAAGCTAACTG...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTAGTGTCTGTGTTTCATaGTTCCAAACACACACACTG +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGSVCVS*FQTHTL
Trigger: CAGTGTGTGTGTTTGGAATCATGAAACACAGACACT...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCATCTGCACCTGAAATaGGGTATGGCTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNHLHLK*GMACPH
Trigger: GTGGGGACAAGCCATACCTCATTTCAGGTGCAGATG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACATCTGCACCTGAAATaGGGTATGGCTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLHLHLK*GMACPH
Trigger: GTGGGGACAAGCCATACCTCATTTCAGGTGCAGATG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCATCTGCACCTGAAATaGGGTATGGCTTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYHLHLK*GMACPH
Trigger: GTGGGGACAAGCCATACCTCATTTCAGGTGCAGATG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTTVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTACTGTTCCATCTTCTaGACCTGTGATAATGATTGG +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQYCSIF*TCDNDW
Trigger: CCAATCATTATCACAGGTTCAGAAGATGGAACAGTA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAGCCGGTAGGTGCTTaGATGCCAAATACGTACTGT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYKPVGA*MPNTYC
Trigger: ACAGTACGTATTTGGCATTCAAGCACCTACCGGCTT...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGCCCATGCAAACTCCTaGGCAGATCCAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLAHANS*ADPKLL
Trigger: CAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTGCCCATGCAAACTCCTaGGCAGATCCAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVAHANS*ADPKLL
Trigger: CAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGC...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGCCCATGCAAACTCCTaGGCAGATCCAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYAHANS*ADPKLL
Trigger: CAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGCCCATGCAAACTCCTaGGCAGATCCAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNAHANS*ADPKLL
Trigger: CAAGAGCTTTGGATCTGCTCAGGAGTTTGCATGGGC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAATTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTEFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQVFTIS*ISPRTS
Trigger: TGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAAC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTCAGAACTTGTGTAAATaGAGCAATCGCCTACCCAAA +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGQNLCK*SNRLPK
Trigger: TTTGGGTAGGCGATTGCTTCATTTACACAAGTTCTG...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCCTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSLVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTLVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAATGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAAAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTACAGCTCTGTTTTCCTaGGAGATGGCCTTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSTALFS*EMAFRV
Trigger: TACCCTAAAGGCCATCTCTCAGGAAAACAGAGCTGT...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TGCAAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTAGGTGCATATCCTCACTaGGTGGAGCTCAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: CKLLSRSKALVSQCHCCVGAYPH*VELRKE
Trigger: TTCTTTTCTGAGCTCCACTCAGTGAGGATATGCACC...TACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTGCTCTTGTTGTCTCTaGCTTGAAAATCCACCCATG +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSACSCCL*LENPPM
Trigger: CATGGGTGGATTTTCAAGTCAGAGACAACAAGAGCA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510181.6
ENST00000677073.1
CDS-3UTR TCA 90 bp GCTGGACTTCTGAATGCTTGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGCTCTTGTTGTCTCTaGCTTGAAAATCCACCCATG +
Preference number: 4 (lower is better)
Translates to: AGLLNAWPKLSFHWHPWTCSCCL*LENPPM
Trigger: CATGGGTGGATTTTCAAGTCAGAGACAACAAGAGCA...TGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677073.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGCCATTGTAAAGACTTaGCAACATCCATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAAIVKT*QHPWLC
Trigger: ACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAACCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQPCNKL*SSNRKI
Trigger: GATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGG...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHNPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLDEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTCACTGTAGTAATCAATaGAATTCACGCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTHCSNQ*NSRLSH
Trigger: ATGAGAAAGGCGTGAATTGCATTGATTACTACAGTG...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCACTGTAGTAATCAATaGAATTCACGCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSHCSNQ*NSRLSH
Trigger: ATGAGAAAGGCGTGAATTGCATTGATTACTACAGTG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYFHNSV*SQAGRC
Trigger: GCACCTACCGGCTTGAGAGCACACTGAATTATGGAA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 4 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSSLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGCCGTAGATACTTTCTaGTCCAAAATCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSAVDTF*SKIWFK
Trigger: TTTAAACCAGATTTTGGAGCAGAAAGTATCTACGGC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSACCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTATGCCACATTATTTTTaGCATCTCTCTCCGCACCCT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAMPHYF*HLSPHP
Trigger: AGGGTGCGGAGAGAGATGGCAAAAATAATGTGGCAT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TGCAAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTAGGCAGGCATCAACCTTaGCCTGTAAAAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: CKLLSRSKALVSQCHCCVGRHQP*PVKSSS
Trigger: TGAGCTACTTTTTACAGGGCAAGGTTGATGCCTGCC...TACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAAATACTGTTTGCATGCTaGAAAGCTAAGGAAACAATG +
Preference number: 4 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTEILFAC*KAKETM
Trigger: CATTGTTTCCTTAGCTTTGCAGCATGCAAACAGTAT...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTCCTCCCGACCAAGCTTAACAATGATGCTCCCTTCATCATAGCCCAAAGCGACTTGTCATTTTGGAGCTaGATACCTCTCAAAACCATG +
Preference number: 4 (lower is better)
Translates to: FLPTKLNNDAPFIIAQSDLSFWS*IPLKTM
Trigger: CATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAA...GTCGCTTTGGGCTATGATGAAGGGAGCATCATTGTTAAGCTTGGTCGGGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTAGTGTCGTTTTTCTGTaGCCTCCAGCGATGAGATGG +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCSVVFL*PPAMRW
Trigger: CCATCTCATCGCTGGAGGGCACAGAAAAACGACACT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTAGATCTGAAGAGTGCTAGCTaGGGAAGCACTGAATTAGGG +
Preference number: 4 (lower is better)
Translates to: KLLSRSKALVSQCHCCVDLKSAS*GSTELG
Trigger: CCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAG...ATCTACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCTGGACAGTAGAGGGTaGATATCCTCACTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTLDSRG*ISSLSG
Trigger: TCCACTCAGTGAGGATATGCACCCTCTACTGTCCAG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGCACAAGACACATTTTaGGCATGTCCTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYAQDTF*ACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGACCTGTGATAATGATTaGCAACTCAGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQTCDND*QLRMKA
Trigger: AGCTTTCATCCTGAGTTGCCAATCATTATCACAGGT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTTGACCCTCTTAGACTaGCCACGCACCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYLTLLD*PRTIPS
Trigger: AGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATTGACCCTCTTAGACTaGCCACGCACCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLLTLLD*PRTIPS
Trigger: AGAGGGTATGGTGCGTGGCCAGTCTAAGAGGGTCAA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGAAATTATCTTTCCATTaGCATCCATGGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQKLSFH*HPWTWQ
Trigger: CTGCCATGTCCATGGATGCCAATGGAAAGATAATTT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTATCGTCCTGTCCAAGTaGGCAATGGTGACTATTTCT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAIVLSK*AMVTIS
Trigger: AGAAATAGTCACCATTGCCCACTTGGACAGGACGAT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCGCATGACAGCTGTCTaGTATTCCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTRMTAV*YSRTET
Trigger: GGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCAAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTTCTGTCCTCTGAGTTaGATTAGACTATTACATGCT +
Preference number: 4 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSFCPLS*IRLLHA
Trigger: AGCATGTAATAGTCTAATCCAACTCAGAGGACAGAA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCACCCTCCTGCTTATGTaGGATGAAGCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SVAIQTSSPESDQKICLGTLLLM*DEAVFL
Trigger: CAGAAACACAGCTTCATCCCACATAAGCAGGAGGGT...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTCCTCCAGCGATGAGATaGCAAATGGTGGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCPPAMR*QMVGKC
Trigger: ACACTTTCCCACCATTTGCCATCTCATCGCTGGAGG...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGCTCTTTAAGTATGGGTaGGGTGTTAAGCTAAATTTA +
Preference number: 4 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVLFKYG*GVKLNL
Trigger: TAAATTTAGCTTAACACCCCACCCATACTTAAAGAG...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CAA 72 bp ATTGCTTTTAGGTTGGCCTGCTGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCATTGGCATCCATGGAC +
Preference number: 4 (lower is better)
Translates to: IAFRLACWTSEC*AQIIFPLASMD
Trigger: GTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
3UTR CAA 72 bp GACATTTCTCTCTTCATTTGGCGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: DISLFIWRDKWV*FGWPQISMCFL
Trigger: AAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCACGCCAAATGAAGAGAGAAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACAAAGTGAAGTTTGGTaGCGAAGAGCCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLQSEVW*RRAQLP
Trigger: TGGCAGTTGGGCTCTTCGTCACCAAACTTCACTTTG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCAAAGTGAAGTTTGGTaGCGAAGAGCCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYQSEVW*RRAQLP
Trigger: TGGCAGTTGGGCTCTTCGTCACCAAACTTCACTTTG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCAAAGTGAAGTTTGGTaGCGAAGAGCCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNQSEVW*RRAQLP
Trigger: TGGCAGTTGGGCTCTTCGTCACCAAACTTCACTTTG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLTVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNTVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGGCCTGCTGGACTTCTaGATGCTTGGCCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNGLLDF*MLGPNY
Trigger: ATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGGCCTGCTGGACTTCTaGATGCTTGGCCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLGLLDF*MLGPNY
Trigger: ATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGCCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGAACTTGTGTAAATaGAGCAATCGCCTACCCAAA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAQNLCK*SNRLPK
Trigger: TTTGGGTAGGCGATTGCTTCATTTACACAAGTTCTG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLLVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYLVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNLVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGTAGATCTTGAGGGCTaGAAGTCTTTTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTVDLEG*KSFPSS
Trigger: GGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTAC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCAGTTAGCTTTCTTTTaGTATCAAGTCGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYQLAFF*YQVAEA
Trigger: CGCCTCTGCGACTTGATATCAAAAGAAAGCTAACTG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507777.6
ENST00000510181.6
CDS-3UTR TCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTGTAAGTGCTGAGAGTTaGGATGATATTTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGVSAES*DDIFRK
Trigger: CTTCCTGAAAATATCATCTCAACTCTCAGCACTTAC...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTAAGAAGTGGAGAGTGTaGTGCTTGTATATCATCAAG +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGKKWRV*CLYIIK
Trigger: CTTGATGATATACAAGCATCACACTCTCCACTTCTT...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGAGGACATCTGTGGTCTTaGAAACATCAGTATGATTTG +
Preference number: 4 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGGHLWS*KHQYDL
Trigger: CAAATCATACTGATGTTTTCAAGACCACAGATGTCC...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTATTTTGTGGTGGTAATTaGGCTGGGAAAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVFCGGN*AGKNSE
Trigger: TTCTGAATTTTTCCCAGCTCAATTACCACCACAAAA...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATTGTGTTTCTGTCCTCTaGGTTGGATTAGACTATTAC +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHCVSVL*VGLDYY
Trigger: GTAATAGTCTAATCCAACTCAGAGGACAGAAACACA...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCGGTGCATATCCTCACTaGGTGGAGCTCAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSGAYPH*VELRKE
Trigger: TTCTTTTCTGAGCTCCACTCAGTGAGGATATGCACC...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTCCTCCCGACCAAGCTTAACAATGATGCTCCCTTCATCATAGCCCAAAGCGACTGTAAGCTTTACATCTaGAGCAATTCATGCTTACTG +
Preference number: 4 (lower is better)
Translates to: FLPTKLNNDAPFIIAQSDCKLYI*SNSCLL
Trigger: CAGTAAGCATGAATTGCTTCAGATGTAAAGCTTACA...GTCGCTTTGGGCTATGATGAAGGGAGCATCATTGTTAAGCTTGGTCGGGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCATGTAAGCTTTACATCTaGAGCAATTCATGCTTACTG +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPCKLYI*SNSCLL
Trigger: CAGTAAGCATGAATTGCTTCAGATGTAAAGCTTACA...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYPCNKL*SSNRKI
Trigger: GATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINDEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCACTGTAGTAATCAATaGAATTCACGCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQHCSNQ*NSRLSH
Trigger: ATGAGAAAGGCGTGAATTGCATTGATTACTACAGTG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGGACCTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCACTGTAGTAATCAATaGAATTCACGCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KDLISHAKVPPHDSCLVFHCSNQ*NSRLSH
Trigger: ATGAGAAAGGCGTGAATTGCATTGATTACTACAGTG...GAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAGGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTCCTCCCGACCAAGCTTAACAATGATGCTCCCTTCATCATAGCCCAAAGCGACCACTGTAGTAATCAATaGAATTCACGCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: FLPTKLNNDAPFIIAQSDHCSNQ*NSRLSH
Trigger: ATGAGAAAGGCGTGAATTGCATTGATTACTACAGTG...GTCGCTTTGGGCTATGATGAAGGGAGCATCATTGTTAAGCTTGGTCGGGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTCTCAAGCCGGTAGGTaGTTGAATGCCAAATACGTA +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYSQAGR*LNAKYV
Trigger: TACGTATTTGGCATTCAAGCACCTACCGGCTTGAGA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTAGATGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: KLLSRSKALVSQCHCCVDAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...ATCTACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGCCCATATCCTTTACTaGCAGTGGCAATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTAHILY*QWQSFT
Trigger: GGTGAAAGATTGCCACTGGCAGTAAAGGATATGGGC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATAGAATCGTGGGCCCATaGAAACTCCTGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINRIVGP*KLLSRS
Trigger: GGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 4 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTSLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAATCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 4 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTESLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGCCGTAGATACTTTCTaGTCCAAAATCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQAVDTF*SKIWFK
Trigger: TTTAAACCAGATTTTGGAGCAGAAAGTATCTACGGC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAGATACTGTAAGAGCTTaGTGCTTGAAGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQDTVRA*CLKPCF
Trigger: AAAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATC...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATATGCCACATTATTTTTaGCATCTCTCTCCGCACCCT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYMPHYF*HLSPHP
Trigger: AGGGTGCGGAGAGAGATGGCAAAAATAATGTGGCAT...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAATGCCACATTATTTTTaGCATCTCTCTCCGCACCCT +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQMPHYF*HLSPHP
Trigger: AGGGTGCGGAGAGAGATGGCAAAAATAATGTGGCAT...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGGCAGGCATCAACCTTaGCCTGTAAAAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTGRHQP*PVKSSS
Trigger: TGAGCTACTTTTTACAGGGCAAGGTTGATGCCTGCC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCCATTTCAAAGCCCCTaGTCTGAAACTGATGTCACT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYPFQSP*SETDVT
Trigger: AGTGACATCAGTTTCAGAGCAGGGGCTTTGAAATGG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGCACAAGACACATTTTaGGCATGTCCTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTAQDTF*ACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTTTCCATTGGCATCCATaGACATGGCAGGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSFHWHP*TWQVPP
Trigger: GGGAGGAACCTGCCATGTCCATGGATGCCAATGGAA...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTTCCATTGGCATCCATaGACATGGCAGGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINFHWHP*TWQVPP
Trigger: GGGAGGAACCTGCCATGTCCATGGATGCCAATGGAA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTATCGTCCTGTCCAAGTaGGCAATGGTGACTATTTCT +
Preference number: 4 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSIVLSK*AMVTIS
Trigger: AGAAATAGTCACCATTGCCCACTTGGACAGGACGAT...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ACCACACACCACCACAAACCGCCCATTAGGATTGTGCTGAATAGTCTGAGGGTAGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: TTHHHKPPIRIVLNSLRVASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...TACCCTCAGACTATTCAGCACAATCCTAATGGGCGGTTTGTGGTGGTGTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTWVLFG*PQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTAGATTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: KLLSRSKALVSQCHCCVDWVLFG*PQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCA...ATCTACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCATTTGGCGTGACAAGTaGGTATTGTTTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTIWRDK*VLFGWP
Trigger: TGGCCAGCCAAACAATACCCACTTGTCACGCCAAAT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGATTTGGCGTGACAAGTaGGTATTGTTTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKIWRDK*VLFGWP
Trigger: TGGCCAGCCAAACAATACCCACTTGTCACGCCAAAT...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATACCTCTCAAAACCATaGGCTTATGTACATTTATCT +
Preference number: 4 (lower is better)
Translates to: RVSSALHSQLEASSSLSVYLSKP*AYVHLS
Trigger: AGATAAATGTACATAAGCCCATGGTTTTGAGAGGTA...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCATTCACTTTCATAAATTaGACACTTCCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPFTFIN*TLPAVT
Trigger: AGTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAA...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCTTGAAAATCCACCCATaGAAACTTGTACTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTLKIHP*KLVLPF
Trigger: AAAGGGAAGTACAAGTTTCCATGGGTGGATTTTCAA...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR CAA 72 bp TTCCATAATTCAGTGTGCTCTCAAGCCGGTAGGTGCTaGAATGCCAAATACGTACTGTTCCATCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: FHNSVCSQAGRC*NAKYVLFHLLN
Trigger: GTTCAGAAGATGGAACAGTACGTATTTGGCATTCAAGCACCTACCGGCTTGAGAGCACACTGAATTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677073.1
3UTR CAA 72 bp CCATCTTTAATTTCAGCATCTCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAATGCTTGGCCCAAATT +
Preference number: 4 (lower is better)
Translates to: PSLISASPIAFR*ACWTSECLAQI
Trigger: AATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAATTAAAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAGTGTCTGTGTTTCATaGTTCCAAACACACACACTG +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYSVCVS*FQTHTL
Trigger: CAGTGTGTGTGTTTGGAATCATGAAACACAGACACT...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATG +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYTANVV*VCFKHM
Trigger: CATATGTTTGAAGCACACTCAGACTACATTCGCTGT...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTACGGTCATCTGCACCTaGAATGAGGTATGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSTVICT*NEVWLV
Trigger: GACAAGCCATACCTCATTTCAGGTGCAGATGACCGT...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATATTGGCAACTCAGGATaGAAGCTGGCACAAGACACA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNIGNSG*KLAQDT
Trigger: TGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAAT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTACTGTTCCATCTTCTaGACCTGTGATAATGATTGG +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAYCSIF*TCDNDW
Trigger: CCAATCATTATCACAGGTTCAGAAGATGGAACAGTA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATAAGCCGGTAGGTGCTTaGATGCCAAATACGTACTGT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYKPVGA*MPNTYC
Trigger: ACAGTACGTATTTGGCATTCAAGCACCTACCGGCTT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNSHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAAGCCATTTACAGATCTaGCTCCCAATAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLSHLQI*LPIRSR
Trigger: GCGGCTTCTTATTGGGAGTCAGATCTGTAAATGGCT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAVFTIS*ISPRTS
Trigger: TGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAAC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCCAAGTGGGCAATGGTaGCTATTTCTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNPSGQW*LFLLQH
Trigger: ATGTTGGAGGAGAAATAGTCACCATTGCCCACTTGG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGTGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGTAGATCTTGAGGGCTaGAAGTCTTTTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLVDLEG*KSFPSS
Trigger: GGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTAC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGTAGATCTTGAGGGCTaGAAGTCTTTTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNVDLEG*KSFPSS
Trigger: GGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTAC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTLSCRS*GLKVFS
Trigger: GGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTGTGGAATGATGCAATaGGGTCAAGAAAAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSACGMMQ*GQEKGF
Trigger: AAACCCTTTTTCTTGACCTCATTGCATCATTCCACA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTCCTGCTTATGTGGGATaGAGCTGTGTTTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSPAYVG*SCVSVL
Trigger: GAGGACAGAAACACAGCTTCATCCCACATAAGCAGG...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTAACTTTGAGATCCCTGTaGCCACCACCCTCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: RLIKKHSVAILQLPKNILTLRSL*PPPSCL
Trigger: TAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGT...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTTGTGCCCTCCAGCGATaGGATGGCAAATGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: NFISSNAQNIHGFVELASCALQR*DGKWWE
Trigger: TTCCCACCATTTGCCATCTCATCGCTGGAGGGCACA...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGAACCTAATGAAGCCCTaGACATACCAACAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKNLMKP*TYQQVA
Trigger: TGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTT...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTTAGCTTTCTTTTaGTATCAAGTCGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAQLAFF*YQVAEV
Trigger: AACCTCTGCGACTTGATATCAAAAGAAAGCTAACTG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGTATCCTCCAGATATTaGTGGGGAGGAAGATGGGGT +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINVSSRY*WGGRWG
Trigger: ACCCCATCTTCCTCCCCATCAATATCTGGAGGATAC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATAAGAAGTGTTATTCATaGAGTCCATGGCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYKKCYS*SPWLRR
Trigger: CCGACGCAGCCATGGACTTCATGAATAACACTTCTT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512242.6
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TGCAAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTATCCAAACACACACACTaGCATTGTAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: CKLLSRSKALVSQCHCCVSKHTH*HCKDLP
Trigger: TGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGA...TACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCTCCAAACACACACACTaGCATTGTAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: SVAIQTSSPESDQKICLGSKHTH*HCKDLP
Trigger: TGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGA...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYNPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYDEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYDEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSACWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGCCCATATCCTTTACTaGCAGTGGCAATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLAHILY*QWQSFT
Trigger: GGTGAAAGATTGCCACTGGCAGTAAAGGATATGGGC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGCCCATATCCTTTACTaGCAGTGGCAATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNAHILY*QWQSFT
Trigger: GGTGAAAGATTGCCACTGGCAGTAAAGGATATGGGC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGCCCATATCCTTTACTaGCAGTGGCAATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYAHILY*QWQSFT
Trigger: GGTGAAAGATTGCCACTGGCAGTAAAGGATATGGGC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGGTATATTTCACAACTaGCCATATCCTTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAGIFHN*PYPLLP
Trigger: TGGCAGTAAAGGATATGGGCAGTTGTGAAATATACC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTGTTTCTCAATGCCATTaGTGTGTAGATGATATACTC +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGVSQCH*CVDDIL
Trigger: GAGTATATCATCTACACAGCAATGGCATTGAGAAAC...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGAGCCGTAGATACTTTCTaGTCCAAAATCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGAVDTF*SKIWFK
Trigger: TTTAAACCAGATTTTGGAGCAGAAAGTATCTACGGC...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCATGCCACATTATTTTTaGCATCTCTCTCCGCACCCT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTMPHYF*HLSPHP
Trigger: AGGGTGCGGAGAGAGATGGCAAAAATAATGTGGCAT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGGCAGGCATCAACCTTaGCCTGTAAAAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLGRHQP*PVKSSS
Trigger: TGAGCTACTTTTTACAGGGCAAGGTTGATGCCTGCC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAATTGTCATTTTGGAGCTaGATACCTCTCAAAACCATG +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQLSFWS*IPLKTM
Trigger: CATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAA...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATTCCAGCTGTATCACGTaGTCCATCCAGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYSSCIT*SIQMAS
Trigger: ACTGGCCATCTGGATGGAGCACGTGATACAGCTGGA...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGAGTGTCGTTTTTCTGTaGCCTCCAGCGATGAGATGG +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLSVVFL*PPAMRW
Trigger: CCATCTCATCGCTGGAGGGCACAGAAAAACGACACT...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTGGCCAAGGATCAGGCTaGTTTTCTTCTTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVGQGSG*FSSLLA
Trigger: AGCCAACAAAGAAGAAAAGCAGCCTGATCCTTGGCC...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503326.6
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATACTTGCCAACATCCATaGCTCTGTAGGATGCAGATC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNTCQHP*LCRMQI
Trigger: GATCTGCATCCTACAGAGCCATGGATGTTGGCAAGT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATACTTGCCAACATCCATaGCTCTGTAGGATGCAGATC +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYTCQHP*LCRMQI
Trigger: GATCTGCATCCTACAGAGCCATGGATGTTGGCAAGT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGCACAAGACACATTTTaGGCATGTCCTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNAQDTF*ACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTAAATTATCTTTCCATTaGCATCCATGGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAKLSFH*HPWTWQ
Trigger: CTGCCATGTCCATGGATGCCAATGGAAAGATAATTT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAAAAATTATCTTTCCATTaGCATCCATGGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQKLSFH*HPWTWQ
Trigger: CTGCCATGTCCATGGATGCCAATGGAAAGATAATTT...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCATCGTCCTGTCCAAGTaGGCAATGGTGACTATTTCT +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSIVLSK*AMVTIS
Trigger: AGAAATAGTCACCATTGCCCACTTGGACAGGACGAT...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCATCGTCCTGTCCAAGTaGGCAATGGTGACTATTTCT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTIVLSK*AMVTIS
Trigger: AGAAATAGTCACCATTGCCCACTTGGACAGGACGAT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCGCATGACAGCTGTCTaGTATTCCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINRMTAV*YSRTET
Trigger: GGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTCGCATGACAGCTGTCTaGTATTCCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSRMTAV*YSRTET
Trigger: GGTTTCAGTCCTGGAATACCAGACAGCTGTCATGCG...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GCTGGACTTCTGAATGCTTGGCCCAAATTATCTTTCCATTGGCATCCATGGACAAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: AGLLNAWPKLSFHWHPWTKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...TGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGTTTTCATACTCTGTTaGGTCAGCAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTVFILC*VSKGFC
Trigger: GCAGAATCCCTTGCTGACCCAACAGAGTATGAAAAC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNWVLFG*PQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYWVLFG*PQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATATTTGGCGTGACAAGTaGGTATTGTTTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYIWRDK*VLFGWP
Trigger: TGGCCAGCCAAACAATACCCACTTGTCACGCCAAAT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTCTTTGTTGGCTGTGTaGGAGGCCACAATAACCGGA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINSLLAV*EATITG
Trigger: TCCGGTTATTGTGGCCTCCCACACAGCCAACAAAGA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTAGATGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 4 (lower is better)
Translates to: KLLSRSKALVSQCHCCVDALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...ATCTACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTCGGGGCAAGACCTGTaGAATGATGCAATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINSGQDL*NDAMRS
Trigger: TGACCTCATTGCATCATTCCACAGGTCTTGCCCCGA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTTGTCAGGGTCTTAATTaGATACTTCTGGTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGCQGLN*ILLVFR
Trigger: TCTAAACACCAGAAGTATCCAATTAAGACCCTGACA...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAACATATTTCTTCAGCCTaGACAATAGAAACAGACAGG +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQHISSA*TIETDR
Trigger: CCTGTCTGTTTCTATTGTCCAGGCTGAAGAAATATG...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATTTCACTTTCATAAATTaGACACTTCCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHFTFIN*TLPAVT
Trigger: AGTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAA...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACCCTCCATTCCCAACTaGAAGCCAGTAGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLPSIPN*KPVVHL
Trigger: TAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTAGTGTCTGTGTTTCATaGTTCCAAACACACACACTG +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCSVCVS*FQTHTL
Trigger: CAGTGTGTGTGTTTGGAATCATGAAACACAGACACT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCAGTGTCTGTGTTTCATaGTTCCAAACACACACACTG +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTSVCVS*FQTHTL
Trigger: CAGTGTGTGTGTTTGGAATCATGAAACACAGACACT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATG +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCTANVV*VCFKHM
Trigger: CATATGTTTGAAGCACACTCAGACTACATTCGCTGT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTACAAAGTGAAGTTTGGTaGCGAAGAGCCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: RLIKKHSVAILQLPKNILQSEVW*RRAQLP
Trigger: TGGCAGTTGGGCTCTTCGTCACCAAACTTCACTTTG...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATATTGGCAACTCAGGATaGAAGCTGGCACAAGACACA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINIGNSG*KLAQDT
Trigger: TGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAAT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTACTGTTCCATCTTCTaGACCTGTGATAATGATTGG +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYYCSIF*TCDNDW
Trigger: CCAATCATTATCACAGGTTCAGAAGATGGAACAGTA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATAAGCCGGTAGGTGCTTaGATGCCAAATACGTACTGT +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINKPVGA*MPNTYC
Trigger: ACAGTACGTATTTGGCATTCAAGCACCTACCGGCTT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACGGCCTGCTGGACTTCTaGATGCTTGGCCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYGLLDF*MLGPNY
Trigger: ATAATTTGGGCCAAGCATTCAGAAGTCCAGCAGGCC...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCAGAACTTGTGTAAATaGAGCAATCGCCTACCCAAA +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTQNLCK*SNRLPK
Trigger: TTTGGGTAGGCGATTGCTTCATTTACACAAGTTCTG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTACTGGTATTCCAGGACTaGAACCAGCAGGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: RLIKKHSVAILQLPKNILLVFQD*NQQGIA
Trigger: AGCTATTCCCTGCTGGTTTCAGTCCTGGAATACCAG...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTAGATCTTGAGGGCTaGAAGTCTTTTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLVDLEG*KSFPSS
Trigger: GGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTAC...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNLSCRS*GLKVFS
Trigger: GGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYLSCRS*GLKVFS
Trigger: GGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR TCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAGTAAGTGCTGAGAGTTaGGATGATATTTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQVSAES*DDIFRK
Trigger: CTTCCTGAAAATATCATCTCAACTCTCAGCACTTAC...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTTTTGTGGTGGTAATTaGGCTGGGAAAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAFCGGN*AGKNSE
Trigger: TTCTGAATTTTTCCCAGCTCAATTACCACCACAAAA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCGTTAAGACAGATTGCTaGTGTAGAACCCGATTTTCC +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSVKTDC*CRTRFS
Trigger: GGAAAATCGGGTTCTACATCAGCAATCTGTCTTAAC...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCAAAGCACAAGCATTTTaGGTGTCGTTTTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTKAQAF*VSFFCA
Trigger: GGCACAGAAAAACGACACTCAAAATGCTTGTGCTTT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTACAGCTCTGTTTTCCTaGGAGATGGCCTTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSTALFS*EMAFRV
Trigger: TACCCTAAAGGCCATCTCTCAGGAAAACAGAGCTGT...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCAATACTCCCATCTTCTaGACCTGTGATAATGATTGG +
Preference number: 4 (lower is better)
Translates to: SVAIQTSSPESDQKICLGNTPIF*TCDNDW
Trigger: CCAATCATTATCACAGGTTCAGAAGATGGGAGTATT...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGCCATTGTAAAGACTTaGCAACATCCATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNAIVKT*QHPWLC
Trigger: ACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTNPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATTGAACACTCTAATCTaGATGTCATCCGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLLNTLI*MSSAPV
Trigger: GACAGGAGCGGATGACATGCAGATTAGAGTGTTCAA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTGACGAAGAGCCCAACTaGCACACCTTGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIDEEPN*HTLIVL
Trigger: CAGGACTATCAAGGTGTGGCAGTTGGGCTCTTCGTC...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTTCCATAATTCAGTGTaGTCTCAAGCCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINFHNSV*SQAGRC
Trigger: GCACCTACCGGCTTGAGAGCACACTGAATTATGGAA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAATGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQCWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGCCCATATCCTTTACTaGCAGTGGCAATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINAHILY*QWQSFT
Trigger: GGTGAAAGATTGCCACTGGCAGTAAAGGATATGGGC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCGGTATATTTCACAACTaGCCATATCCTTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: SVAIQTSSPESDQKICLGGIFHN*PYPLLP
Trigger: TGGCAGTAAAGGATATGGGCAGTTGTGAAATATACC...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGATACTGTAAGAGCTTaGTGCTTGAAGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLDTVRA*CLKPCF
Trigger: AAAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGATACTGTAAGAGCTTaGTGCTTGAAGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNDTVRA*CLKPCF
Trigger: AAAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATATGCCACATTATTTTTaGCATCTCTCTCCGCACCCT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNMPHYF*HLSPHP
Trigger: AGGGTGCGGAGAGAGATGGCAAAAATAATGTGGCAT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATATGCCACATTATTTTTaGCATCTCTCTCCGCACCCT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYMPHYF*HLSPHP
Trigger: AGGGTGCGGAGAGAGATGGCAAAAATAATGTGGCAT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCATGATGTGGGCATTGTaGTCCCAGTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFMMWAL*SQWSTA
Trigger: TGCTGTGGACCACTGGGAGCACAATGCCCACATCAT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGTTTGCTTCACTAGGATaGTATTTTACTAATGCGTTC +
Preference number: 4 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGFASLG*YFTNAF
Trigger: GAACGCATTAGTAAAATAGCATCCTAGTGAAGCAAA...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGTTTAGGTTGGCCTGCTaGACTTCTGAATGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRFRLAC*TSECLA
Trigger: GGCCAAGCATTCAGAAGTCCAGCAGGCCAACCTAAA...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATATCGTCCTGTCCAAGTaGGCAATGGTGACTATTTCT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYIVLSK*AMVTIS
Trigger: AGAAATAGTCACCATTGCCCACTTGGACAGGACGAT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACCCCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYPLKPD*VSKFGP
Trigger: TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGG...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGTTTTCATACTCTGTTaGGTCAGCAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLVFILC*VSKGFC
Trigger: GCAGAATCCCTTGCTGACCCAACAGAGTATGAAAAC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINWVLFG*PQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATATTTGGCGTGACAAGTaGGTATTGTTTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINIWRDK*VLFGWP
Trigger: TGGCCAGCCAAACAATACCCACTTGTCACGCCAAAT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLLLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCTGCTCAGAATATACATaGTTTTGTGGAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SVAIQTSSPESDQKICLGCSEYT*FCGTGF
Trigger: GAAGCCAGTTCCACAAAACCATGTATATTCTGAGCA...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAATTCACTTTCATAAATTaGACACTTCCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQFTFIN*TLPAVT
Trigger: AGTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAA...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAATTCTGTCCTCTGAGTTaGATTAGACTATTACATGCT +
Preference number: 4 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQFCPLS*IRLLHA
Trigger: AGCATGTAATAGTCTAATCCAACTCAGAGGACAGAA...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CAA 72 bp ACATCTGAAGCAATTCATGCTTACTGGGAGGGAAGTTaGAGTACTTACTTAGCTTTTCCTGCTATTCCTAGG +
Preference number: 4 (lower is better)
Translates to: TSEAIHAYWEGS*STYLAFPAIPR
Trigger: CCTAGGAATAGCAGGAAAAGCTAAGTAAGTACTCAAACTTCCCTCCCAGTAAGCATGAATTGCTTCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CAA 72 bp GCTTGTATATCATCAAGCCTTAGCTGTATTGTCATTTaGGAGCTGCATACCTCTCAAAACCATGGGCTTATG +
Preference number: 4 (lower is better)
Translates to: ACISSSLSCIVI*ELHTSQNHGLM
Trigger: CATAAGCCCATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAATACAGCTAAGGCTTGATGATATACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACAGTTAGCTTTCTTTTaGTATCAAGTCGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLQLAFF*YQVAEA
Trigger: TGCCTCTGCGACTTGATATCAAAAGAAAGCTAACTG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333188.10
ENST00000512309.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAAGTGTCTGTGTTTCATaGTTCCAAACACACACACTG +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLSVCVS*FQTHTL
Trigger: CAGTGTGTGTGTTTGGAATCATGAAACACAGACACT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTGTGCTTCAAACATATaGACTCTCTCCAGAGTATTG +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTCASNI*TLSRVL
Trigger: CAATACTCTGGAGAGAGTTCATATGTTTGAAGCACA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTTGTGCTTCAAACATATaGACTCTCTCCAGAGTATTG +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCCASNI*TLSRVL
Trigger: CAATACTCTGGAGAGAGTTCATATGTTTGAAGCACA...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGAAAGGCTGGGTTGGATaGACAGCAATACAGCGAATG +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRKGWVG*TAIQRM
Trigger: CATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTT...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR TCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGATTGGCAACTCAGGATaGAAGCTGGCACAAGACACA +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRIGNSG*KLAQDT
Trigger: TGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAAT...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR TCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTTACTGTTCCATCTTCTaGACCTGTGATAATGATTGG +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCYCSIF*TCDNDW
Trigger: CCAATCATTATCACAGGTTCAGAAGATGGAACAGTA...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503326.6
ENST00000677073.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTACTGTTCCATCTTCTaGACCTGTGATAATGATTGG +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTYCSIF*TCDNDW
Trigger: CCAATCATTATCACAGGTTCAGAAGATGGAACAGTA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
CDS-3UTR TCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTAAAGCCGGTAGGTGCTTaGATGCCAAATACGTACTGT +
Preference number: 4 (lower is better)
Translates to: RLIKKHSVAILQLPKNILKPVGA*MPNTYC
Trigger: ACAGTACGTATTTGGCATTCAAGCACCTACCGGCTT...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATCCATTGCTGTGTAGATaGTATACTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYPLLCR*YTPHHH
Trigger: GTGGTGATGGGGAGTATATCATCTACACAGCAATGG...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR TCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCAGAACTTGTGTAAATaGAGCAATCGCCTACCCAAA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNQNLCK*SNRLPK
Trigger: TTTGGGTAGGCGATTGCTTCATTTACACAAGTTCTG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTTTTAACTCTCCAAGCTaGAGAGCAAGCTCAAAACGA +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVFNSPS*RASSKR
Trigger: TCGTTTTGAGCTTGCTCTTCAGCTTGGAGAGTTAAA...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTTTAACTCTCCAAGCTaGAGAGCAAGCTCAAAACGA +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYFNSPS*RASSKR
Trigger: TCGTTTTGAGCTTGCTCTTCAGCTTGGAGAGTTAAA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATTTAACTCTCCAAGCTaGAGAGCAAGCTCAAAACGA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLFNSPS*RASSKR
Trigger: TCGTTTTGAGCTTGCTCTTCAGCTTGGAGAGTTAAA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTTGGGCTAGGCCAAACTaGCATTTACTAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSWARPN*HLLMAS
Trigger: ACTTGCCATTAGTAAATGTCAGTTTGGCCTAGCCCA...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: NFISSNAQNIHGFVELASPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTCCATCAAGTTCCTGTTaGGCTGTAGATCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIPSSSC*AVDLEG
Trigger: GCCCTCAAGATCTACAGCTCAACAGGAACTTGATGG...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTAAACTCTTCTTAAGATaGTGTGGGCATTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSKLFLR*CGHCAP
Trigger: GGGAGCACAATGCCCACATCATCTTAAGAAGAGTTT...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGTGTGGAATGATGCAATaGGGTCAAGAAAAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKCGMMQ*GQEKGF
Trigger: AAACCCTTTTTCTTGACCTCATTGCATCATTCCACA...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTGCAAGACCTGTGGAATaGTGCAATGAGGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSARPVE*CNEVKK
Trigger: TTTCTTGACCTCATTGCATCATTCCACAGGTCTTGC...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGACTATTACATGCTGGTaGAGTAAGCTGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLTITCW*SKLAWK
Trigger: TTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGT...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCTGTGTTTCTGTCCTCTaGGTTGGATTAGACTATTAC +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSCVSVL*VGLDYY
Trigger: GTAATAGTCTAATCCAACTCAGAGGACAGAAACACA...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCCCTGCTTATGTGGGATaGAGCTGTGTTTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFPAYVG*SCVSVL
Trigger: GAGGACAGAAACACAGCTTCATCCCACATAAGCAGG...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTGTTAAGACAGATTGCTaGTGTAGAACCCGATTTTCC +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVVKTDC*CRTRFS
Trigger: GGAAAATCGGGTTCTACATCAGCAATCTGTCTTAAC...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TGCAAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTAAAAGTGTCAGCTGTGTaGAAAGATAGTGATTGTTTG +
Preference number: 4 (lower is better)
Translates to: CKLLSRSKALVSQCHCCVKVSAV*KDSDCL
Trigger: CAAACAATCACTATCTTTTCACACAGCTGACACTTT...TACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACCCGCACCCGGCCAATaGATTTTAAATATTCACAAA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLPAPGQ*ILNIHK
Trigger: TTTGTGAATATTTAAAATTCATTGGCCGGGTGCGGG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512242.6
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATCCAAACACACACACTaGCATTGTAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLSKHTH*HCKDLP
Trigger: TGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTCCAAACACACACACTaGCATTGTAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNSKHTH*HCKDLP
Trigger: TGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINPCNKL*SSNRKI
Trigger: GATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLNPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYNPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVNPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTTGAACACTCTAATCTaGATGTCATCCGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINLNTLI*MSSAPV
Trigger: GACAGGAGCGGATGACATGCAGATTAGAGTGTTCAA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTCACTGTAGTAATCAATaGAATTCACGCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSHCSNQ*NSRLSH
Trigger: ATGAGAAAGGCGTGAATTGCATTGATTACTACAGTG...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTCTCAAGCCGGTAGGTaGTTGAATGCCAAATACGTA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINSQAGR*LNAKYV
Trigger: TACGTATTTGGCATTCAAGCACCTACCGGCTTGAGA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTCWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTAGATTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: KLLSRSKALVSQCHCCVDCWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...ATCTACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATGCTTTTAGGTTGGCCTaGTGGACTTCTGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYAFRLA*WTSECL
Trigger: CAAGCATTCAGAAGTCCAGCAGGCCAACCTAAAAGC...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGTTTCTCAATGCCATTaGTGTGTAGATGATATACTC +
Preference number: 4 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYVSQCH*CVDDIL
Trigger: GAGTATATCATCTACACAGCAATGGCATTGAGAAAC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAGTTTCTCAATGCCATTaGTGTGTAGATGATATACTC +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQVSQCH*CVDDIL
Trigger: GAGTATATCATCTACACAGCAATGGCATTGAGAAAC...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 4 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSASLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACTTTTCCAAAAAGTGTaGAACTCTGGTCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLLFQKV*NSGPLF
Trigger: GAACAGAGGACCAGAGTTGCACACTTTTTGGAAAAG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCTTTTCCAAAAAGTGTaGAACTCTGGTCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYLFQKV*NSGPLF
Trigger: GAACAGAGGACCAGAGTTGCACACTTTTTGGAAAAG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTCTTTTCCAAAAAGTGTaGAACTCTGGTCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVLFQKV*NSGPLF
Trigger: GAACAGAGGACCAGAGTTGCACACTTTTTGGAAAAG...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGTGCTGCTTGAAGCCCTaGTTTTCCAAAAAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLCCLKP*FSKKCA
Trigger: TGCACACTTTTTGGAAAAGCAGGGCTTCAAGCAGCA...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGATACTGTAAGAGCTTaGTGCTTGAAGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINDTVRA*CLKPCF
Trigger: AAAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCACTCAGTCGCCATTCTaGAGCTTCCTAAAAATATTT +
Preference number: 4 (lower is better)
Translates to: SVAIQTSSPESDQKICLGTQSPF*SFLKIF
Trigger: AAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGT...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCATACTGTTTGCATGCTaGAAAGCTAAGGAAACAATG +
Preference number: 4 (lower is better)
Translates to: SVAIQTSSPESDQKICLGILFAC*KAKETM
Trigger: CATTGTTTCCTTAGCTTTGCAGCATGCAAACAGTAT...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCAAATTGGACACTTCCTaGAGTGACTCCTGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFKLDTS*SDSCPS
Trigger: GCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCTTTATAAGGCCACATaGCTAAGCTCCAAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYLYKAT*LSSKGN
Trigger: ATTCCCTTTGGAGCTTAGGCATGTGGCCTTATAAAG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGCACAAGACACATTTTaGGCATGTCCTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRAQDTF*ACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGC...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATGCACAAGACACATTTTaGGCATGTCCTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYAQDTF*ACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGC...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCACCTGTGATAATGATTaGCAACTCAGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTTCDND*QLRMKA
Trigger: AGCTTTCATCCTGAGTTGCCAATCATTATCACAGGT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTACCTGTGATAATGATTaGCAACTCAGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCTCDND*QLRMKA
Trigger: AGCTTTCATCCTGAGTTGCCAATCATTATCACAGGT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKGLLNA*PKLSFH
Trigger: ATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGGTCCTCTGTTCTTTTaGAATGGTAGGAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINGPLFF*NGRKDL
Trigger: AAGGTCCTTCCTACCATTCCAAAAGAACAGAGGACC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGTTTTCATACTCTGTTaGGTCAGCAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINVFILC*VSKGFC
Trigger: GCAGAATCCCTTGCTGACCCAACAGAGTATGAAAAC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGATTTGGCGTGACAAGTaGGTATTGTTTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRIWRDK*VLFGWP
Trigger: TGGCCAGCCAAACAATACCCACTTGTCACGCCAAAT...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCCTTCCTGTCTTTGTGTaGTCACATCACATCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFLPVFV*SHHIGG
Trigger: TCCCCCGATGTGATGTGACCACACAAAGACAGGAAG...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTCTGCAAACCACAGGCTaGACAGTAGAGGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDILQTTG*TVEGAY
Trigger: ATATGCACCCTCTACTGTCCAGCCTGTGGTTTGCAG...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTCAGTTAGCTTTCTTTTaGTATCAAGTCGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IILKHEPNEALNIPTGSSQLAFF*YQVAEA
Trigger: TGCCTCTGCGACTTGATATCAAAAGAAAGCTAACTG...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATAGTGTCTGTGTTTCATaGTTCCAAACACACACACTG +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINSVCVS*FQTHTL
Trigger: CAGTGTGTGTGTTTGGAATCATGAAACACAGACACT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTGTGCTTCAAACATATaGACTCTCTCCAGAGTATTG +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNCASNI*TLSRVL
Trigger: CAATACTCTGGAGAGAGTTCATATGTTTGAAGCACA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTGTGCTTCAAACATATaGACTCTCTCCAGAGTATTG +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYCASNI*TLSRVL
Trigger: CAATACTCTGGAGAGAGTTCATATGTTTGAAGCACA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTTGTGCTTCAAACATATaGACTCTCTCCAGAGTATTG +
Preference number: 4 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVCASNI*TLSRVL
Trigger: CAATACTCTGGAGAGAGTTCATATGTTTGAAGCACA...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATG +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINTANVV*VCFKHM
Trigger: CATATGTTTGAAGCACACTCAGACTACATTCGCTGT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCGAGGCACTGGCAAACTaGTTGTTATCTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFEALAN*LLSLGL
Trigger: CAACCCCAAAGATAACAATCAGTTTGCCAGTGCCTC...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTATTGGCAACTCAGGATaGAAGCTGGCACAAGACACA +
Preference number: 4 (lower is better)
Translates to: NFISSNAQNIHGFVELASIGNSG*KLAQDT
Trigger: TGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAAT...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCTCTTATTGCATACTCTaGAGAATCGTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFSYCIL*RIVGPC
Trigger: GCATGGGCCCACGATTCTTCAGAGTATGCAATAAGA...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYVFTIS*ISPRTS
Trigger: TGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAAC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLVFTIS*ISPRTS
Trigger: TGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAAC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTCCAAGTGGGCAATGGTaGCTATTTCTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: NFISSNAQNIHGFVELASPSGQW*LFLLQH
Trigger: ATGTTGGAGGAGAAATAGTCACCATTGCCCACTTGG...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTTTAACTCTCCAAGCTaGAGAGCAAGCTCAAAACGA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINFNSPS*RASSKR
Trigger: TCGTTTTGAGCTTGCTCTTCAGCTTGGAGAGTTAAA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYLSCRS*GLKVFS
Trigger: GGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAA...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTAACTATTACATGCTGGTaGAGTAAGCTGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RLIKKHSVAILQLPKNILTITCW*SKLAWK
Trigger: TTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGT...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAAAGTGTCAGCTGTGTaGAAAGATAGTGATTGTTTG +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSKVSAV*KDSDCL
Trigger: CAAACAATCACTATCTTTTCACACAGCTGACACTTT...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCAAAGTGTCAGCTGTGTaGAAAGATAGTGATTGTTTG +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTKVSAV*KDSDCL
Trigger: CAAACAATCACTATCTTTTCACACAGCTGACACTTT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACAGTTAGCTTTCTTTTaGTATCAAGTCGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLQLAFF*YQVAEV
Trigger: AACCTCTGCGACTTGATATCAAAAGAAAGCTAACTG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTCCAAACACACACACTaGCATTGTAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINSKHTH*HCKDLP
Trigger: TGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGCCTTGCAACAAACTTTaGAGCTCGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRPCNKL*SSNRKI
Trigger: GATCTTCCTGTTCGAGCTGCAAAGTTTGTTGCAAGG...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATAACCCAATTCTTCCTTaGAACAAACTTTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINNPILP*NKLCSS
Trigger: CGAGCTGCAAAGTTTGTTGCAAGGAAGAATTGGGTT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACTTGAACACTCTAATCTaGATGTCATCCGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYLNTLI*MSSAPV
Trigger: GACAGGAGCGGATGACATGCAGATTAGAGTGTTCAA...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACTCTCAAGCCGGTAGGTaGTTGAATGCCAAATACGTA +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYSQAGR*LNAKYV
Trigger: TACGTATTTGGCATTCAAGCACCTACCGGCTTGAGA...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNCWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGGTATATTTCACAACTaGCCATATCCTTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNGIFHN*PYPLLP
Trigger: TGGCAGTAAAGGATATGGGCAGTTGTGAAATATACC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGGTATATTTCACAACTaGCCATATCCTTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLGIFHN*PYPLLP
Trigger: TGGCAGTAAAGGATATGGGCAGTTGTGAAATATACC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGTTTCTCAATGCCATTaGTGTGTAGATGATATACTC +
Preference number: 4 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTVSQCH*CVDDIL
Trigger: GAGTATATCATCTACACAGCAATGGCATTGAGAAAC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCGTTTCTCAATGCCATTaGTGTGTAGATGATATACTC +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSVSQCH*CVDDIL
Trigger: GAGTATATCATCTACACAGCAATGGCATTGAGAAAC...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCGCCGTAGATACTTTCTaGTCCAAAATCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: GIILKHEPNEALNIPTGSAVDTF*SKIWFK
Trigger: TTTAAACCAGATTTTGGAGCAGAAAGTATCTACGGC...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAATTTGCTTCACTAGGATaGTATTTTACTAATGCGTTC +
Preference number: 4 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQFASLG*YFTNAF
Trigger: GAACGCATTAGTAAAATAGCATCCTAGTGAAGCAAA...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTGCACAAGACACATTTTaGGCATGTCCTTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIAQDTF*ACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGC...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATACCTGTGATAATGATTaGCAACTCAGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYTCDND*QLRMKA
Trigger: AGCTTTCATCCTGAGTTGCCAATCATTATCACAGGT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATAAATTATCTTTCCATTaGCATCCATGGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNKLSFH*HPWTWQ
Trigger: CTGCCATGTCCATGGATGCCAATGGAAAGATAATTT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNGLLNA*PKLSFH
Trigger: ATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAAAAAGTGTGCAACTCTaGTCCTCTGTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLKSVQL*SSVLLE
Trigger: TTCCAAAAGAACAGAGGACCAGAGTTGCACACTTTT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACGTTTTCATACTCTGTTaGGTCAGCAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYVFILC*VSKGFC
Trigger: GCAGAATCCCTTGCTGACCCAACAGAGTATGAAAAC...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTAGTTTTCATACTCTGTTaGGTCAGCAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: RLIKKHSVAILQLPKNILVFILC*VSKGFC
Trigger: GCAGAATCCCTTGCTGACCCAACAGAGTATGAAAAC...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCATTTGGCGTGACAAGTaGGTATTGTTTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFIWRDK*VLFGWP
Trigger: TGGCCAGCCAAACAATACCCACTTGTCACGCCAAAT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACGCATTGTGCTCCCAGTaGTCCACAGCATTTACATAT +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYALCSQ*STAFTY
Trigger: ATATGTAAATGCTGTGGACCACTGGGAGCACAATGC...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTCTTCTTAAGATGATGTaGGCATTGTGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDILLKMM*ALCSQW
Trigger: CCACTGGGAGCACAATGCCCACATCATCTTAAGAAG...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGTGTCAGGGTCTTAATTaGATACTTCTGGTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKCQGLN*ILLVFR
Trigger: TCTAAACACCAGAAGTATCCAATTAAGACCCTGACA...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTATGATGCAACCAACTTaGTCCAGCTGTATCACGTGC +
Preference number: 4 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIMMQPT*SSCITC
Trigger: GCACGTGATACAGCTGGACCAAGTTGGTTGCATCAT...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGTTCTGTCCTCTGAGTTaGATTAGACTATTACATGCT +
Preference number: 4 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKFCPLS*IRLLHA
Trigger: AGCATGTAATAGTCTAATCCAACTCAGAGGACAGAA...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCACCCTCCTGCTTATGTaGGATGAAGCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFTLLLM*DEAVFL
Trigger: CAGAAACACAGCTTCATCCCACATAAGCAGGAGGGT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTCTCTTTAAGTATGGGTaGGGTGTTAAGCTAAATTTA +
Preference number: 4 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSLFKYG*GVKLNL
Trigger: TAAATTTAGCTTAACACCCCACCCATACTTAAAGAG...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
3UTR CAA 72 bp AGTGTGATGCTTGTATATCATCAAGCCTTAGCTGTATaGTCATTTTGGAGCTGCATACCTCTCAAAACCATG +
Preference number: 4 (lower is better)
Translates to: SVMLVYHQALAV*SFWSCIPLKTM
Trigger: CATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAATACAGCTAAGGCTTGATGATATACAAGCATCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLVFTIS*ISPRTS
Trigger: TGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAAC...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATCAGAACTTGTGTAAATaGAGCAATCGCCTACCCAAA +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYQNLCK*SNRLPK
Trigger: TTTGGGTAGGCGATTGCTTCATTTACACAAGTTCTG...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTGCAAGACCTGTGGAATaGTGCAATGAGGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIARPVE*CNEVKK
Trigger: TTTCTTGACCTCATTGCATCATTCCACAGGTCTTGC...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCAAGGATCAGGCTGCTaGGGGAATAAATTTAATCAA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINQGSGC*GNKFNQ
Trigger: TTGATTAAATTTATTCCCTCAGCAGCCTGATCCTTG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTCATTCTCAGAATCGATaGTGCAACCAACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: NFISSNAQNIHGFVELASHSQNR*CNQLGP
Trigger: TGGACCAAGTTGGTTGCATCATCGATTCTGAGAATG...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTCATTCTCAGAATCGATaGTGCAACCAACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIHSQNR*CNQLGP
Trigger: TGGACCAAGTTGGTTGCATCATCGATTCTGAGAATG...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCCATGGCTCTGTAGGATaGAGATCCACACTCTTAACT +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFHGSVG*RSTLLT
Trigger: AGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATG...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGGTATATTTCACAACTaGCCATATCCTTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINGIFHN*PYPLLP
Trigger: TGGCAGTAAAGGATATGGGCAGTTGTGAAATATACC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGTTTCTCAATGCCATTaGTGTGTAGATGATATACTC +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYVSQCH*CVDDIL
Trigger: GAGTATATCATCTACACAGCAATGGCATTGAGAAAC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGCCGTAGATACTTTCTaGTCCAAAATCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLAVDTF*SKIWFK
Trigger: TTTAAACCAGATTTTGGAGCAGAAAGTATCTACGGC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACCTTTTCCAAAAAGTGTaGAACTCTGGTCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYLFQKV*NSGPLF
Trigger: GAACAGAGGACCAGAGTTGCACACTTTTTGGAAAAG...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTGCAAGCTCAAAACGATaGTCAGGATCTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: NFISSNAQNIHGFVELASASSKR*SGSVDT
Trigger: AGTATCCACAGATCCTGAGCATCGTTTTGAGCTTGC...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACGTCAGCAAGGGATTCTaGTGCTTTCTGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYVSKGF*CFLIDF
Trigger: AAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGAC...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATACTCAGTCGCCATTCTaGAGCTTCCTAAAAATATTT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYTQSPF*SFLKIF
Trigger: AAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATCTTTATAAGGCCACATaGCTAAGCTCCAAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYLYKAT*LSSKGN
Trigger: ATTCCCTTTGGAGCTTAGGCATGTGGCCTTATAAAG...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTGTGATAATGATTaGCAACTCAGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINTCDND*QLRMKA
Trigger: AGCTTTCATCCTGAGTTGCCAATCATTATCACAGGT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLGLLNA*PKLSFH
Trigger: ATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINGLLNA*PKLSFH
Trigger: ATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTTGAAAATCCACCCATaGAAACTTGTACTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYLKIHP*KLVLPF
Trigger: AAAGGGAAGTACAAGTTTCCATGGGTGGATTTTCAA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510181.6
ENST00000677073.1
CDS-3UTR TCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATTGTGCTTCAAACATATaGACTCTCTCCAGAGTATTG +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYCASNI*TLSRVL
Trigger: CAATACTCTGGAGAGAGTTCATATGTTTGAAGCACA...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCACAGCGAATGTAGTCTaGGTGTGCTTCAAACATATG +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFTANVV*VCFKHM
Trigger: CATATGTTTGAAGCACACTCAGACTACATTCGCTGT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACTACTGTTCCATCTTCTaGACCTGTGATAATGATTGG +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYYCSIF*TCDNDW
Trigger: CCAATCATTATCACAGGTTCAGAAGATGGAACAGTA...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR TCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATGTTTTCACAATTTCCTaGATCTCACCAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYVFTIS*ISPRTS
Trigger: TGAGGTTCTTGGTGAGATTCAGGAAATTGTGAAAAC...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATAAGAAGTGGAGAGTGTaGTGCTTGTATATCATCAAG +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYKKWRV*CLYIIK
Trigger: CTTGATGATATACAAGCATCACACTCTCCACTTCTT...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTAGGACATCTGTGGTCTTaGAAACATCAGTATGATTTG +
Preference number: 4 (lower is better)
Translates to: RLIKKHSVAILQLPKNILGHLWS*KHQYDL
Trigger: CAAATCATACTGATGTTTTCAAGACCACAGATGTCC...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCAAAGCACAAGCATTTTaGGTGTCGTTTTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFKAQAF*VSFFCA
Trigger: GGCACAGAAAAACGACACTCAAAATGCTTGTGCTTT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATTTTGAGTATGATGTCTaGCCTACCTTTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINFEYDV*PTFSSL
Trigger: CAAAGAAGAAAAGGTAGGTCAGACATCATACTCAAA...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR TCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGTTATCCGTGGGTTCATaGTTCAAAGTGAGAACTAAG +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRLSVGS*FKVRTK
Trigger: CTTAGTTCTCACTTTGAATCATGAACCCACGGATAA...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCACTGTAGTAATCAATaGAATTCACGCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINHCSNQ*NSRLSH
Trigger: ATGAGAAAGGCGTGAATTGCATTGATTACTACAGTG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACGGTATATTTCACAACTaGCCATATCCTTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYGIFHN*PYPLLP
Trigger: TGGCAGTAAAGGATATGGGCAGTTGTGAAATATACC...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 4 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYSLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGCCGTAGATACTTTCTaGTCCAAAATCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINAVDTF*SKIWFK
Trigger: TTTAAACCAGATTTTGGAGCAGAAAGTATCTACGGC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGAAATTATCTTTCCATTaGCATCCATGGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRKLSFH*HPWTWQ
Trigger: CTGCCATGTCCATGGATGCCAATGGAAAGATAATTT...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGGACTTCTGAATGCTTaGCCCAAATTATCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRGLLNA*PKLSFH
Trigger: ATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTATGCTCAGAATATACATaGTTTTGTGGAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RLIKKHSVAILQLPKNILCSEYT*FCGTGF
Trigger: GAAGCCAGTTCCACAAAACCATGTATATTCTGAGCA...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTACCTCTCAAAACCATaGGCTTATGTACATTTATCT +
Preference number: 4 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNYLSKP*AYVHLS
Trigger: AGATAAATGTACATAAGCCCATGGTTTTGAGAGGTA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTGGCTACAAGGATATTTaGGTGCCTGGTTATGAATTT +
Preference number: 4 (lower is better)
Translates to: NFISSNAQNIHGFVELASGYKDI*VPGYEF
Trigger: AAATTCATAACCAGGCACTCAAATATCCTTGTAGCC...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCAAGAAGTGGAGAGTGTaGTGCTTGTATATCATCAAG +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFKKWRV*CLYIIK
Trigger: CTTGATGATATACAAGCATCACACTCTCCACTTCTT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTTGCTGGACTTCTGAATaGTTGGCCCAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: NFISSNAQNIHGFVELASCWTSE*LAQIIF
Trigger: AAAGATAATTTGGGCCAAGCATTCAGAAGTCCAGCA...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTTTGTCATTTTGGAGCTaGATACCTCTCAAAACCATG +
Preference number: 4 (lower is better)
Translates to: NFISSNAQNIHGFVELASLSFWS*IPLKTM
Trigger: CATGGTTTTGAGAGGTATGCAGCTCCAAAATGACAA...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACGCTTCCACTGCTAACTaGTATGCAATTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYASTAN*YAIFNS
Trigger: AGAGTTAAAAATTGCATACCAGTTAGCAGTGGAAGC...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATTTCACTTTCATAAATTaGACACTTCCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYFTFIN*TLPAVT
Trigger: AGTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAA...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CCA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGCTCTTTAAGTATGGGTaGGGTGTTAAGCTAAATTTA +
Preference number: 4 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLLFKYG*GVKLNL
Trigger: TAAATTTAGCTTAACACCCCACCCATACTTAAAGAG...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR TCA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCTTTCAATTCTTCGTATaGGTTCTGTATTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LYISEKYRPEELNSCSVFFQFFV*VLYCPS
Trigger: ACTGGGACAATACAGAACTCATACGAAGAATTGAAA...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR GCA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGTCTTTACAATGCTGTTaGTCTCTCTTATTGCATACT +
Preference number: 4 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRSLQCC*SLLLHT
Trigger: AGTATGCAATAAGAGAGAGCAACAGCATTGTAAAGA...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR GCA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATTTTGCTTCACTAGGATaGTATTTTACTAATGCGTTC +
Preference number: 4 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYFASLG*YFTNAF
Trigger: GAACGCATTAGTAAAATAGCATCCTAGTGAAGCAAA...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS CCA 90 bp GGCGCGGCCCTCAGTCCAGAAGCTCCAGGAATCGGCCGTAACCTATaGGACCCCGCTCCCTTCTACGGGATCTGGACCTACCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: GAALSPEAPGIGRNL*DPAPFYGIWTYHGC
Trigger: GCAGCCATGGTAGGTCCAGATCCCGTAGAAGGGAGCGGGGTCCCATAGGTTACGGCCGATTCCTGGAGCTTCTGGACTGAGGGCCGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510181.6
ENST00000512153.5
CDS CCA 90 bp AGCGCGGCCCTCAGTCCAGAAGCTCCAGGAATCGGCCGTAACCTATaGGACCCCGCTCCCTTCTACGGGATCTGGACCTACCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: SAALSPEAPGIGRNL*DPAPFYGIWTYHGC
Trigger: GCAGCCATGGTAGGTCCAGATCCCGTAGAAGGGAGCGGGGTCCCATAGGTTACGGCCGATTCCTGGAGCTTCTGGACTGAGGGCCGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513274.5
CDS CCA 90 bp GGAATCGGCCGTAACCTATGGGACCCCGCTCCCTTCTACGGGATCTaGACCTACCATGGCTGCGTCGGTCCAATCCCGGGAACCCTCGTT +
Preference number: 5 (lower is better)
Translates to: GIGRNLWDPAPFYGI*TYHGCVGPIPGTLV
Trigger: AACGAGGGTTCCCGGGATTGGACCGACGCAGCCATGGTAGGTCCAGATCCCGTAGAAGGGAGCGGGGTCCCATAGGTTACGGCCGATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510181.6
ENST00000512153.5
ENST00000513274.5
CDS GCA 90 bp CTATGGGACCCCGCTCCCTTCTACGGGATCTGGACCTACCATGGCTaGGTCGGTCCAATCCCGGGAACCCTCGTTTGTTACCGGCTACTC +
Preference number: 5 (lower is better)
Translates to: LWDPAPFYGIWTYHG*VGPIPGTLVCYRLL
Trigger: GAGTAGCCGGTAACAAACGAGGGTTCCCGGGATTGGACCGACGCAGCCATGGTAGGTCCAGATCCCGTAGAAGGGAGCGGGGTCCCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510181.6
ENST00000512153.5
ENST00000513274.5
CDS TCA 90 bp GGTCCAATCCCGGGAACCCTCGTTTGTTACCGGCTACTCAGGCCTTaGGATAAACCCACCGATCCACTGACCGTCAGACTGACTGACGTG +
Preference number: 5 (lower is better)
Translates to: GPIPGTLVCYRLLRP*DKPTDPLTVRLTDV
Trigger: CACGTCAGTCAGTCTGACGGTCAGTGGATCGGTGGGTTTATCTCAAGGCCTGAGTAGCCGGTAACAAACGAGGGTTCCCGGGATTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000503326.6
ENST00000512153.5
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677309.1
ENST00000677601.1
ENST00000677882.1
CDS-3UTR CAA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTCCCGGGAACCCTCGTTaGTTACCGGCTACTCAGGCC +
Preference number: 5 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTPGNPR*LPATQA
Trigger: GGCCTGAGTAGCCGGTAACAAACGAGGGTTCCCGGG...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGCGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATC +
Preference number: 5 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGRDKWV*FGWPQI
Trigger: GATCTGTGGCCAGCCAAACAATACCCACTTGTCACG...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGCTCTTTTCTTCTTTGTaGGCTGTGTGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: LYLLPLSPCSSSPSSGKGLFSSL*AVWEAT
Trigger: TGTGGCCTCCCACACAGCCAACAAAGAAGAAAAGAG...CCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCCCGGGAACCCTCGTTaGTTACCGGCTACTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAPGNPR*LPATQA
Trigger: GGCCTGAGTAGCCGGTAACAAACGAGGGTTCCCGGG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CAGGGAAGGCTGAAGAGTGCTAGCTGCGGAAGCACTGAATTAGGGTGTCCTCAGCAAGCCGGTAGGTGCTaGAATGCCAAATACGTACTG +
Preference number: 5 (lower is better)
Translates to: QGRLKSASCGSTELGCPQQAGRC*NAKYVL
Trigger: CAGTACGTATTTGGCATTCAAGCACCTACCGGCTTG...CTGAGGACACCCTAATTCAGTGCTTCCGCAGCTAGCACTCTTCAGCCTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGACCAAAGCGACATTGTTaGACCCTCTTAGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGPKRHC*TLLDWP
Trigger: TGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGG...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGAACGCAGGGAAGGCTGAAGCAAATTATCTTTCCATaGGCATCCATGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: HPALHPPAQVRGTQGRLKQIIFP*ASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTG...CTTCAGCCTTCCCTGCGTTCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGGTAAGAGCTTGCTGCTaGAAGCCCTGCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SGQKQQAPIILCMMQALLVRACC*KPCFSK
Trigger: TTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTAC...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATC +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSRDKWV*FGWPQI
Trigger: GATCTGTGGCCAGCCAAACAATACCCACTTGTCACG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTCCCAACTGCCACACCTaGATAGTCCTGTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTPNCHT*IVLSKE
Trigger: CTCTTTGGACAGGACTATCAAGGTGTGGCAGTTGGG...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGGTAAGAGCTTGCTGCTaGAAGCCCTGCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVVRACC*KPCFSK
Trigger: TTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTAC...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTCTCTTTTCTTCTTTGTaGGCTGTGTGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSLFSSL*AVWEAT
Trigger: TGTGGCCTCCCACACAGCCAACAAAGAAGAAAAGAG...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGATGATGCAACCAACTaGGTCCAGCTGTATCACGTG +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSDDATN*VQLYHV
Trigger: CACGTGATACAGCTGGACCAAGTTGGTTGCATCATC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTCCCGGGAACCCTCGTTaGTTACCGGCTACTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCPGNPR*LPATQA
Trigger: GGCCTGAGTAGCCGGTAACAAACGAGGGTTCCCGGG...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTGCCATTGTAAAGACTaGCCAACATCCATGGCTCTG +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSCHCKD*PTSMAL
Trigger: CAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCAAGCCGGTAGGTGCTaGAATGCCAAATACGTACTG +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSQAGRC*NAKYVL
Trigger: CAGTACGTATTTGGCATTCAAGCACCTACCGGCTTG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCCCAAAGCGACATTGTTaGACCCTCTTAGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSPKRHC*TLLDWP
Trigger: TGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGG...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LISHAKVPPHDSCLVFQDPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...GTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGGGATACTGTAAGAGCTaGCTGCTTGAAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEGYCKS*LLEALL
Trigger: AAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATCC...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 5 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVRVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGGACCTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATC +
Preference number: 5 (lower is better)
Translates to: KDLISHAKVPPHDSCLVFRDKWV*FGWPQI
Trigger: GATCTGTGGCCAGCCAAACAATACCCACTTGTCACG...GAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAGGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS CCA 90 bp CTTGACATCCTGGCCACTCACCGTGACAAGTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGTTTCCTTCACCCATTCTTCAACAAC +
Preference number: 5 (lower is better)
Translates to: LDILATHRDKWVLFG*PQISMCFLHPFFNN
Trigger: GTTGTTGAAGAATGGGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCACGGTGAGTGGCCAGGATGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502734.2
CDS CCA 90 bp GGACTTCTGAATGCTTGGCCCAAATTATCTTTCCATTGGCATCCATaGACATGGCAGGTTCCTCCCGACCAAGCATCTTCTGAACCTGTG +
Preference number: 5 (lower is better)
Translates to: GLLNAWPKLSFHWHP*TWQVPPDQASSEPV
Trigger: CACAGGTTCAGAAGATGCTTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677309.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCCCGGGAACCCTCGTTaGTTACCGGCTACTCAGGCC +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNPGNPR*LPATQA
Trigger: GGCCTGAGTAGCCGGTAACAAACGAGGGTTCCCGGG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACCCGGGAACCCTCGTTaGTTACCGGCTACTCAGGCC +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLPGNPR*LPATQA
Trigger: GGCCTGAGTAGCCGGTAACAAACGAGGGTTCCCGGG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTGCCATTGTAAAGACTaGCCAACATCCATGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSCHCKD*PTSMAL
Trigger: CAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCAAAGCGACATTGTTaGACCCTCTTAGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQPKRHC*TLLDWP
Trigger: TGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GATGATGCAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGATGGCCAGGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: DDATNLVQLYHVLHPDGQADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...CTGGCCATCTGGATGGAGCACGTGATACAGCTGGACCAAGTTGGTTGCATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGTAAGAGCTTGCTGCTaGAAGCCCTGCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSVRACC*KPCFSK
Trigger: TTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTAC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGGTAAGAGCTTGCTGCTaGAAGCCCTGCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: HISISRGSGQKQQAPIILVRACC*KPCFSK
Trigger: TTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTAC...CAGGATTATGGGGGCCTGCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTGCACCCTCTGCTAGCTaGTTCACCATATTAGCATTT +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSAPSAS*FTILAF
Trigger: AAATGCTAATATGGTGAACAAGCTAGCAGAGGGTGC...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 5 (lower is better)
Translates to: RVSSALHSQLEASSSLSVNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGTGCATGATGCAGGCACTCCTGAGAATATACATGGTTTaGTGGAACTGGCTTCTATCC +
Preference number: 5 (lower is better)
Translates to: SGQKQQAPIILCMMQALLRIYMV*WNWLLS
Trigger: GGATAGAAGCCAGTTCCACAAAACCATGTATATTCT...CAGGAGTGCCTGCATCATGCACAGGATTATGGGGGCCTGCTGCTTTTGGCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGCAAGCCTTAGCTGTATaGTCATTTTGGAGCTGCATA +
Preference number: 5 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVQALAV*SFWSCI
Trigger: TATGCAGCTCCAAAATGACAATACAGCTAAGGCTTG...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGACAAGCCTTAGCTGTATaGTCATTTTGGAGCTGCATA +
Preference number: 5 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGQALAV*SFWSCI
Trigger: TATGCAGCTCCAAAATGACAATACAGCTAAGGCTTG...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AGGGTGTCCTCAGCCCTCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTAGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RVSSALHSQLEASSSLSVAVSFL*ISSRRG
Trigger: GCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGC...TACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGAGGGCTGAGGACACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTGCCATTGTAAAGACTaGCCAACATCCATGGCTCTG +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQCHCKD*PTSMAL
Trigger: CAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGACAAGCCGGTAGGTGCTaGAATGCCAAATACGTACTG +
Preference number: 5 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGQAGRC*NAKYVL
Trigger: CAGTACGTATTTGGCATTCAAGCACCTACCGGCTTG...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATTCTGAACAGAAGAGTGAGCTTACTGCAAACCACAGGCTGGACAGTAGAGGGTCCAAAGCGACATTGTTaGACCCTCTTAGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: ILNRRVSLLQTTGWTVEGPKRHC*TLLDWP
Trigger: TGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGG...ACCCTCTACTGTCCAGCCTGTGGTTTGCAGTAAGCTCACTCTTCTGTTCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCA +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSWTSEC*AQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGTGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCA +
Preference number: 5 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVWTSEC*AQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCA...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GTGACAAGTGGGTATTGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTTCACCTTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: VTSGYCLAGHRSACVSFTFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGGTGTGTTGCTCTCTCTTATaGCATACTCTGAAGAATCGT +
Preference number: 5 (lower is better)
Translates to: KLDTSCSDSCPSCLTELVCCSLL*HTLKNR
Trigger: ACGATTCTTCAGAGTATGCAATAAGAGAGAGCAACA...CACCAACTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTCTCCAGAGTTTCACTACCCTTGAAACCTGACTGGGTAAGTAAGTTCGGGCCAGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: LSRVSLPLKPDWVSKFGPGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...TGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGAACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCTCTTTTCTTCTTTGTaGGCTGTGTGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHLFSSL*AVWEAT
Trigger: TGTGGCCTCCCACACAGCCAACAAAGAAGAAAAGAG...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS GCA 90 bp CTTACTATCTACCAGGAGCCTGACAGTGTATCAGGTAGTGCCTCATaGACTGGACCAACAGTGGGAAATAAGATGAGGGTAATCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LTIYQEPDSVSGSAS*TGPTVGNKMRVILV
Trigger: GACAAGGATTACCCTCATCTTATTTCCCACTGTTGGTCCAGTGCATGAGGCACTACCTGATACACTGTCAGGCTCCTGGTAGATAGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504295.1
CDS CCA 90 bp CTGAATGCTTGGCCCAAATTATCTTTCCATTGGCATCCATGGACATaGCAGGTTCCTCCCGACCAAGCATCTTCTGAACCTGTGATAATG +
Preference number: 5 (lower is better)
Translates to: LNAWPKLSFHWHPWT*QVPPDQASSEPVIM
Trigger: CATTATCACAGGTTCAGAAGATGCTTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677309.1
CDS CCA 90 bp ACCTCCCCTCTCCCACCTCATGACAAAGAAGACAGGTTTATTCTTTaGAGAGGACAAACTAAAGAGTCTCCAGACCAGGAGATTCCAAGC +
Preference number: 5 (lower is better)
Translates to: TSPLPPHDKEDRFIL*RGQTKESPDQEIPS
Trigger: GCTTGGAATCTCCTGGTCTGGAGACTCTTTAGTTTGTCCTCTCCAAAGAATAAACCTGTCTTCTTTGTCATGAGGTGGGAGAGGGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQAVSFL*ISSRRG
Trigger: GCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGGGATTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: CTYSHCHPALHPPAQVRGLLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...TCCCCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCCCAACTGCCACACCTaGATAGTCCTGTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYPNCHT*IVLSKE
Trigger: CTCTTTGGACAGGACTATCAAGGTGTGGCAGTTGGG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAACCCAACTGCCACACCTaGATAGTCCTGTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQPNCHT*IVLSKE
Trigger: CTCTTTGGACAGGACTATCAAGGTGTGGCAGTTGGG...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCCAAAGCGACATTGTTaGACCCTCTTAGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAPKRHC*TLLDWP
Trigger: TGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTCAAATTATCTTTCCATaGGCATCCATGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTQIIFP*ASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTG...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAACAAATTATCTTTCCATaGGCATCCATGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTEQIIFP*ASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTG...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCA +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSWTSEC*AQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATTTTGAGTGTCGTTTTTCTGTGCCCTCCAGCGATGAGATGGCAAATGGTGGGATTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ILSVVFLCPPAMRWQMVGFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...TCCCACCATTTGCCATCTCATCGCTGGAGGGCACAGAAAAACGACACTCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGTTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGGATACTGTAAGAGCTaGCTGCTTGAAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAGYCKS*LLEALL
Trigger: AAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATCC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQRVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTCCTCCCGACCAAGCTTAACAATGATGCTCCCTTCATCATAGCCCAAAGCGACAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: FLPTKLNNDAPFIIAQSDRVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...GTCGCTTTGGGCTATGATGAAGGGAGCATCATTGTTAAGCTTGGTCGGGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSATSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCAGGTTCCTCCCGACAGCTGTATTGTCATTTaGGAGCTGCATACCTCTCAA +
Preference number: 5 (lower is better)
Translates to: WPKLSFHWHPWTWQVPPDSCIVI*ELHTSQ
Trigger: TTGAGAGGTATGCAGCTCCAAAATGACAATACAGCT...GTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATCCCCCAGCTCAGGTAAGGTACTGGGAGGGAAGTTaGAGTACTTACTTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: FCTYSHCHPALHPPAQVRYWEGS*STYLAF
Trigger: AAAAGCTAAGTAAGTACTCAAACTTCCCTCCCAGTA...CCTTACCTGAGCTGGGGGATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS TCA 90 bp GACCAAGCATCTTCTGAACCTGTGATAATGATTGGCAACTCAGGATaGAAGCTGGCACAAGACACATTTTGGGCATGTCCTTCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: DQASSEPVIMIGNSG*KLAQDTFWACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAATCATTATCACAGGTTCAGAAGATGCTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677309.1
CDS-3UTR CAA 90 bp CTACCAAGGCTTGAGGAATTCTGTACTTACTCCCACTGTCACCCTGCTCTTCATGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LPRLEEFCTYSHCHPALHAVSFL*ISSRRG
Trigger: GCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGC...ATGAAGAGCAGGGTGACAGTGGGAGTAAGTACAGAATTCCTCAAGCCTTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CAGCTTAATGAGGTCAGAGGAACAGAGGTTTCACATCCTGACTCCAGAAATGGGGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: QLNEVRGTEVSHPDSRNGAVSFL*ISSRRG
Trigger: GCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGC...CCCATTTCTGGAGTCAGGATGTGAAACCTCTGTTCCTCTGACCTCATTAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTTTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSLLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GACTTTGAGATCCCTGTGACCACCACCCTCCTGCTTATGTGGGATGAAGCTGTGTTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: DFEIPVTTTLLLMWDEAVLLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...CACAGCTTCATCCCACATAAGCAGGAGGGTGGTGGTCACAGGGATCTCAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCCCAACTGCCACACCTaGATAGTCCTGTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTPNCHT*IVLSKE
Trigger: CTCTTTGGACAGGACTATCAAGGTGTGGCAGTTGGG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCAAATTATCTTTCCATaGGCATCCATGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQQIIFP*ASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCTGTTGCTCTCTCTTATaGCATACTCTGAAGAATCGT +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSCCSLL*HTLKNR
Trigger: ACGATTCTTCAGAGTATGCAATAAGAGAGAGCAACA...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 5 (lower is better)
Translates to: EKTVGLIPRQGVVSAQPSIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...AGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGGATACTGTAAGAGCTaGCTGCTTGAAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYGYCKS*LLEALL
Trigger: AAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATCC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATCTCTTTTCTTCTTTGTaGGCTGTGTGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYLFSSL*AVWEAT
Trigger: TGTGGCCTCCCACACAGCCAACAAAGAAGAAAAGAG...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCCTCTTTTCTTCTTTGTaGGCTGTGTGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: SVAIQTSSPESDQKICLGLFSSL*AVWEAT
Trigger: TGTGGCCTCCCACACAGCCAACAAAGAAGAAAAGAG...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTATCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACAAGTCTGGTGTGTTTTaGTGTTACCAAATAGGGCAA +
Preference number: 5 (lower is better)
Translates to: LISHAKVPPHDSCLVFQDKSGVF*CYQIGQ
Trigger: TTGCCCTATTTGGTAACACAAAAACACACCAGACTT...GTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGATGATGCAACCAACTaGGTCCAGCTGTATCACGTG +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYDDATN*VQLYHV
Trigger: CACGTGATACAGCTGGACCAAGTTGGTTGCATCATC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTGATGATGCAACCAACTaGGTCCAGCTGTATCACGTG +
Preference number: 5 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSDDATN*VQLYHV
Trigger: CACGTGATACAGCTGGACCAAGTTGGTTGCATCATC...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGATTCACTTTCATAAATaGGACACTTCCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTEIHFHK*DTSCSD
Trigger: GTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAAT...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CATATTAGCATTTCCAGAGGCAGTGGCCAAAAGCAGCAGGCCCCCATAATCCTGATTCACTTTCATAAATaGGACACTTCCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: HISISRGSGQKQQAPIILIHFHK*DTSCSD
Trigger: GTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAAT...CAGGATTATGGGGGCCTGCTGCTTTTGGCCACTGCCTCTGGAAATGCTAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCAGCCATGCTAAAGTCCCTCCGCATGACAGCTGTCTGGTATTCCAGGACTGAATACTGGGAGGGAAGTTaGAGTACTTACTTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: SAMLKSLRMTAVWYSRTEYWEGS*STYLAF
Trigger: AAAAGCTAAGTAAGTACTCAAACTTCCCTCCCAGTA...TTCAGTCCTGGAATACCAGACAGCTGTCATGCGGAGGGACTTTAGCATGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAATGCTTTTCTTCTTTGTaGGCTGTGTGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQCFSSL*AVWEAT
Trigger: TGTGGCCTCCCACACAGCCAACAAAGAAGAAAAGCA...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503326.6
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTCCACCCATGGAAACTaGTACTTCCCTTTCATAATG +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQSTHGN*YFPFIM
Trigger: CATTATGAAAGGGAAGTACAAGTTTCCATGGGTGGA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510181.6
ENST00000677073.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCTTGTTGTCTCTGACTaGAAAATCCACCCATGGAAA +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQLVVSD*KIHPWK
Trigger: TTTCCATGGGTGGATTTTCAAGTCAGAGACAACAAG...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510181.6
ENST00000677073.1
CDS TCA 90 bp ATACTCCCATCTTCTGAACCTGTGATAATGATTGGCAACTCAGGATaGAAGCTGGCACAAGACACATTTTGGGCATGTCCTTCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: ILPSSEPVIMIGNSG*KLAQDTFWACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAATCATTATCACAGGTTCAGAAGATGGGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAAVSFL*ISSRRG
Trigger: GCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTTCATAAATTGGACACTTCCTGCAGTGACTCCTGCCCTAGCTGCCTCACGGAGTTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: FHKLDTSCSDSCPSCLTELLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...CTCCGTGAGGCAGCTAGGGCAGGAGTCACTGCAGGAAGTGTCCAATTTATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTTTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTLLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCCCAACTGCCACACCTaGATAGTCCTGTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNPNCHT*IVLSKE
Trigger: CTCTTTGGACAGGACTATCAAGGTGTGGCAGTTGGG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCCCAACTGCCACACCTaGATAGTCCTGTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYPNCHT*IVLSKE
Trigger: CTCTTTGGACAGGACTATCAAGGTGTGGCAGTTGGG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: GIILKHEPNEALNIPTGSGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCAAGCCGGTAGGTGCTaGAATGCCAAATACGTACTG +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTQAGRC*NAKYVL
Trigger: CAGTACGTATTTGGCATTCAAGCACCTACCGGCTTG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: GIILKHEPNEALNIPTGSPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGTGTTGCTCTCTCTTATaGCATACTCTGAAGAATCGT +
Preference number: 5 (lower is better)
Translates to: YKEKTVGLIPRQGVVSAQCCSLL*HTLKNR
Trigger: ACGATTCTTCAGAGTATGCAATAAGAGAGAGCAACA...CTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 5 (lower is better)
Translates to: TVGLIPRQGVVSAQPSKTIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...AGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAGCCTTCTAAAACTAGAAGCATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 5 (lower is better)
Translates to: GLIPRQGVVSAQPSKTRSIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...GCTTCTAGTTTTAGAAGGCTGAGCCGAAACTACACCTTGCCTAGGGATCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCGGATACTGTAAGAGCTaGCTGCTTGAAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTGYCKS*LLEALL
Trigger: AAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATCC...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSARVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATC +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLRDKWV*FGWPQI
Trigger: GATCTGTGGCCAGCCAAACAATACCCACTTGTCACG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATC +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNRDKWV*FGWPQI
Trigger: GATCTGTGGCCAGCCAAACAATACCCACTTGTCACG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCTCTTTTCTTCTTTGTaGGCTGTGTGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTLFSSL*AVWEAT
Trigger: TGTGGCCTCCCACACAGCCAACAAAGAAGAAAAGAG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCAGGGAGCAGCCCCTTaGTTCTTTGGAGCACTGGAA +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINQGAAP*FFGALE
Trigger: TTCCAGTGCTCCAAAGAACAAAGGGGCTGCTCCCTG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TGGCCCAAATTATCTTTCCATTGGCATCCATGGACATGGCAGGTTCCTCCCGACAAACATCAGTATGATTaGTCCCCATATTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: WPKLSFHWHPWTWQVPPDKHQYD*SPYFFS
Trigger: GCTGAAGAAATATGGGGACAAATCATACTGATGTTT...GTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTAAGCTGGCCTGGAAATaGTCTACCATTAGGAATGCT +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAKLAWK*STIRNA
Trigger: AGCATTCCTAATGGTAGACAATTTCCAGGCCAGCTT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS TCA 90 bp AACTTACCATCTTCTGAACCTGTGATAATGATTGGCAACTCAGGATaGAAGCTGGCACAAGACACATTTTGGGCATGTCCTTCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: NLPSSEPVIMIGNSG*KLAQDTFWACPSSV
Trigger: GACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCCAGCTTTCATCCTGAGTTGCCAATCATTATCACAGGTTCAGAAGATGGTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS TCA 90 bp GGGTTCTGTCTGGCTATATCTTCAGGATGGCTTTATCATCAAGTTTaGAATGTTTTAACTTCTCAGCTTATACAGGCTGCCAACCCGCCC +
Preference number: 5 (lower is better)
Translates to: GFCLAISSGWLYHQV*NVLTSQLIQAANPP
Trigger: GGGCGGGTTGGCAGCCTGTATAAGCTGAGAAGTTAAAACATTTCAAACTTGATGATAAAGCCATCCTGAAGATATAGCCAGACAGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS GCA 90 bp TTCACCTGCTGCCAAAATTTTAAGTTTCCTGAGGCCTCCCAGTCATaGTTCCTGTTAAGCCTGTGGAACTGTGAGTCAATTAAACCTCTT +
Preference number: 5 (lower is better)
Translates to: FTCCQNFKFPEASQS*FLLSLWNCESIKPL
Trigger: AAGAGGTTTAATTGACTCACAGTTCCACAGGCTTAACAGGAAGCATGACTGGGAGGCCTCAGGAAACTTAAAATTTTGGCAGCAGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504295.1
CDS CCA 90 bp ATTCCAAACACACACACTGCCATTGTAAAGACTTGCCAACATCCATaGCTCTGTAGGATGCAGATCCACACTCTTAACTCGATCAGATCT +
Preference number: 5 (lower is better)
Translates to: IPNTHTAIVKTCQHP*LCRMQIHTLNSIRS
Trigger: AGATCTGATCGAGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCAGTGTGTGTGTTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000333188.10
ENST00000503326.6
ENST00000504295.1
ENST00000507777.6
ENST00000510181.6
ENST00000510491.5
ENST00000512153.5
ENST00000512242.6
ENST00000512309.2
ENST00000513274.5
ENST00000514508.2
ENST00000515006.5
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
ENST00000677882.1
CDS-3UTR CAA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTTGCCATTGTAAAGACTaGCCAACATCCATGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCCHCKD*PTSMAL
Trigger: CAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCA...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCTGCCATTGTAAAGACTaGCCAACATCCATGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GIILKHEPNEALNIPTGSCHCKD*PTSMAL
Trigger: CAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCA...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCCCAACTGCCACACCTaGATAGTCCTGTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINPNCHT*IVLSKE
Trigger: CTCTTTGGACAGGACTATCAAGGTGTGGCAGTTGGG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACAAGCCGGTAGGTGCTaGAATGCCAAATACGTACTG +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLQAGRC*NAKYVL
Trigger: CAGTACGTATTTGGCATTCAAGCACCTACCGGCTTG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCAAGCCGGTAGGTGCTaGAATGCCAAATACGTACTG +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNQAGRC*NAKYVL
Trigger: CAGTACGTATTTGGCATTCAAGCACCTACCGGCTTG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCCAAAGCGACATTGTTaGACCCTCTTAGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYPKRHC*TLLDWP
Trigger: TGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACCAAAGCGACATTGTTaGACCCTCTTAGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLPKRHC*TLLDWP
Trigger: TGGCCAGTCTAAGAGGGTCAAACAATGTCGCTTTGG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTCAAATTATCTTTCCATaGGCATCCATGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAQIIFP*ASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTG...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGGATACTGTAAGAGCTaGCTGCTTGAAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNGYCKS*LLEALL
Trigger: AAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATCC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGGATACTGTAAGAGCTaGCTGCTTGAAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYGYCKS*LLEALL
Trigger: AAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATCC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCAGTAGCAATACAGACTAGCTCTCCAGAGTCAGACCAGAAAATATGTTTGGGCAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: SVAIQTSSPESDQKICLGRVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...GCCCAAACATATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATC +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINRDKWV*FGWPQI
Trigger: GATCTGTGGCCAGCCAAACAATACCCACTTGTCACG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTACTCTTTTCTTCTTTGTaGGCTGTGTGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLLFSSL*AVWEAT
Trigger: TGTGGCCTCCCACACAGCCAACAAAGAAGAAAAGAG...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATTGCATACTCTGAAGAATCGTGGGCCCATGCAAACTCCTGAGCAGATCCAAAGCTGTATTGTCATTTaGGAGCTGCATACCTCTCAA +
Preference number: 5 (lower is better)
Translates to: LLHTLKNRGPMQTPEQIQSCIVI*ELHTSQ
Trigger: TTGAGAGGTATGCAGCTCCAAAATGACAATACAGCT...TTGGATCTGCTCAGGAGTTTGCATGGGCCCACGATTCTTCAGAGTATGCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS TCA 90 bp AAATCTGAAGTCCTGAATGTACTTCCACCCTGTAGTTACAATAAATaGAGCTTGACATCCTGGCCACTCACCGTGACAAGTGGGTATTGT +
Preference number: 5 (lower is better)
Translates to: KSEVLNVLPPCSYNK*SLTSWPLTVTSGYC
Trigger: ACAATACCCACTTGTCACGGTGAGTGGCCAGGATGTCAAGCTTCATTTATTGTAACTACAGGGTGGAAGTACATTCAGGACTTCAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502734.2
CDS-3UTR CAA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTTGCCATTGTAAAGACTaGCCAACATCCATGGCTCTG +
Preference number: 5 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVCHCKD*PTSMAL
Trigger: CAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCA...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTGCCATTGTAAAGACTaGCCAACATCCATGGCTCTG +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYCHCKD*PTSMAL
Trigger: CAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTGCCATTGTAAAGACTaGCCAACATCCATGGCTCTG +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNCHCKD*PTSMAL
Trigger: CAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGCCCAACTGCCACACCTaGATAGTCCTGTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRPNCHT*IVLSKE
Trigger: CTCTTTGGACAGGACTATCAAGGTGTGGCAGTTGGG...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CAA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTCAAGCCGGTAGGTGCTaGAATGCCAAATACGTACTG +
Preference number: 5 (lower is better)
Translates to: IILKHEPNEALNIPTGSSQAGRC*NAKYVL
Trigger: CAGTACGTATTTGGCATTCAAGCACCTACCGGCTTG...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTTGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCA +
Preference number: 5 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSWTSEC*AQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCA...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGCCCATTGCTTTTAGGTaGGCCTGCTGGACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLPIAFR*ACWTSE
Trigger: TTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGG...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTTTCAGCATCTCCCATaGCTTTTAGGTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNFQHLP*LLGWPA
Trigger: AGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGTAAGAGCTTGCTGCTaGAAGCCCTGCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLVRACC*KPCFSK
Trigger: TTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTAC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGTAAGAGCTTGCTGCTaGAAGCCCTGCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYVRACC*KPCFSK
Trigger: TTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTAC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AGAAAAGAATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGGATACTGTAAGAGCTaGCTGCTTGAAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RKELGFCTHLFQTQFPLLGYCKS*LLEALL
Trigger: AAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATCC...CAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAATTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGGCACCCTCTGCTAGCTaGTTCACCATATTAGCATTT +
Preference number: 5 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKAPSAS*FTILAF
Trigger: AAATGCTAATATGGTGAACAAGCTAGCAGAGGGTGC...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTGCACCCTCTGCTAGCTaGTTCACCATATTAGCATTT +
Preference number: 5 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCAPSAS*FTILAF
Trigger: AAATGCTAATATGGTGAACAAGCTAGCAGAGGGTGC...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGGTTTTCATACTCTGTaGGGTCAGCAAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYGFHTL*GQQGIL
Trigger: CAGAATCCCTTGCTGACCCAACAGAGTATGAAAACC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINTSGYC*AGHRSA
Trigger: TGCTGATCTGTGGCCAGCCAAACAATACCCACTTGT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGCGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATC +
Preference number: 5 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRRDKWV*FGWPQI
Trigger: GATCTGTGGCCAGCCAAACAATACCCACTTGTCACG...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCTCTTTTCTTCTTTGTaGGCTGTGTGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINLFSSL*AVWEAT
Trigger: TGTGGCCTCCCACACAGCCAACAAAGAAGAAAAGAG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTCAGGGAGCAGCCCCTTaGTTCTTTGGAGCACTGGAA +
Preference number: 5 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIQGAAP*FFGALE
Trigger: TTCCAGTGCTCCAAAGAACAAAGGGGCTGCTCCCTG...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCAAGCTGGCCTGGAAATaGTCTACCATTAGGAATGCT +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTKLAWK*STIRNA
Trigger: AGCATTCCTAATGGTAGACAATTTCCAGGCCAGCTT...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTTACTGGGAGGGAAGTTaGAGTACTTACTTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAYWEGS*STYLAF
Trigger: AAAAGCTAAGTAAGTACTCAAACTTCCCTCCCAGTA...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS TCA 90 bp CACAATTTTGTGCCCAGGTCAATAGTGTCATATCAGGAAATATTCTaGAGAAGTGTTATTCATGAAGTCCATGGCTGCGTCGGTCCAATC +
Preference number: 5 (lower is better)
Translates to: HNFVPRSIVSYQEIF*RSVIHEVHGCVGPI
Trigger: GATTGGACCGACGCAGCCATGGACTTCATGAATAACACTTCTTCAGAATATTTCCTGATATGACACTATTGACCTGGGCACAAAATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512242.6
CDS CCA 90 bp TCCACTAGCATTGATATAGATAACATAAAACCCAAGAGTGGAGGATaGAAGATCTCTGGAACTAGTCAGATACAGCCAAGGGCAAAACAC +
Preference number: 5 (lower is better)
Translates to: STSIDIDNIKPKSGG*KISGTSQIQPRAKH
Trigger: GTGTTTTGCCCTTGGCTGTATCTGACTAGTTCCAGAGATCTTCCATCCTCCACTCTTGGGTTTTATGTTATCTATATCAATGCTAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNAVSFL*ISSRRG
Trigger: GCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512309.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLAVSFL*ISSRRG
Trigger: GCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512309.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTTGCCATTGTAAAGACTaGCCAACATCCATGGCTCTG +
Preference number: 5 (lower is better)
Translates to: IILKHEPNEALNIPTGSSCHCKD*PTSMAL
Trigger: CAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCA...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AATTATCCAAATCTACTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGGCACAAGACACATTTaGGGCATGTCCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: NYPNLLLVRVNSADKRKRGTRHI*GMSFQC
Trigger: ACACTGGAAGGACATGCCCAAAATGTGTCTTGTGCC...CCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAGTAGATTTGGATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCAAATTATCTTTCCATaGGCATCCATGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTQIIFP*ASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGTGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCA +
Preference number: 5 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKWTSEC*AQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCA...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCA +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTWTSEC*AQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TGCAAACTCCTGAGCAGATCCAAAGCTCTTGTTTCTCAATGCCATTGCTGTGTATGTTGCTCTCTCTTATaGCATACTCTGAAGAATCGT +
Preference number: 5 (lower is better)
Translates to: CKLLSRSKALVSQCHCCVCCSLL*HTLKNR
Trigger: ACGATTCTTCAGAGTATGCAATAAGAGAGAGCAACA...TACACAGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGCTCAGGAGTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACAAAGAAAAGACAGTGGGGCTGATCCCTAGGCAAGGTGTAGTTTCGGCTATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 5 (lower is better)
Translates to: LYKEKTVGLIPRQGVVSAIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...AGCCGAAACTACACCTTGCCTAGGGATCAGCCCCACTGTCTTTTCTTTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGCACCCTCTGCTAGCTaGTTCACCATATTAGCATTT +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYAPSAS*FTILAF
Trigger: AAATGCTAATATGGTGAACAAGCTAGCAGAGGGTGC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNRVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCCGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATC +
Preference number: 5 (lower is better)
Translates to: LYISEKYRPEELNSCSVFRDKWV*FGWPQI
Trigger: GATCTGTGGCCAGCCAAACAATACCCACTTGTCACG...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGCCATCTTCAGTAACTCCCTCATGTGTTTCCTGTGCAGCCAAGACTTTTTCTAAGTCAAAAGTTAGTTaGGTAACTCTTAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: MPSSVTPSCVSCAAKTFSKSKVS*VTLSLQ
Trigger: CTGGAGGCTAAGAGTTACCAAACTAACTTTTGACTT...AGAAAAAGTCTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACGGGGTAGAGGGAGGTTaGAGTATGATGTCTGACCTA +
Preference number: 5 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYGVEGG*SMMSDL
Trigger: TAGGTCAGACATCATACTCAAACCTCCCTCTACCCC...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CAA 90 bp AACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAAAGCACAAGTCCACCCATGGAAACTaGTACTTCCCTTTCATAATG +
Preference number: 5 (lower is better)
Translates to: NWKPVVHLVYIAEPQKHKSTHGN*YFPFIM
Trigger: CATTATGAAAGGGAAGTACAAGTTTCCATGGGTGGA...CTTGTGCTTTTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677073.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCCTTGTTGTCTCTGACTaGAAAATCCACCCATGGAAA +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTLVVSD*KIHPWK
Trigger: TTTCCATGGGTGGATTTTCAAGTCAGAGACAACAAG...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510181.6
ENST00000677073.1
CDS TCA 90 bp CACATTCATGACATAACAGAGCCTGATTTTGAACCCAGGTTTGTTTaGCTCCAAAGCACATGCTTTTTCAGTTTCTCTTTAGGACAGCTG +
Preference number: 5 (lower is better)
Translates to: HIHDITEPDFEPRFV*LQSTCFFSFSLGQL
Trigger: CAGCTGTCCTAAAGAGAAACTGAAAAAGCATGTGCTTTGGAGTCAAACAAACCTGGGTTCAAAATCAGGCTCTGTTATGTCATGAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS-3UTR CAA 90 bp CTTCTTAAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATTTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: LLKMMWALCSQWSTAFTYLLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...ATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTTAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCAAATTATCTTTCCATaGGCATCCATGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNQIIFP*ASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTG...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATGGACTTCTGAATGCTaGGCCCAAATTATCTTTCCA +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLWTSEC*AQIIFP
Trigger: TGGAAAGATAATTTGGGCCAAGCATTCAGAAGTCCA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTGTTGCTCTCTCTTATaGCATACTCTGAAGAATCGT +
Preference number: 5 (lower is better)
Translates to: SKKFLIVQSTVVRVAINTCCSLL*HTLKNR
Trigger: ACGATTCTTCAGAGTATGCAATAAGAGAGAGCAACA...GGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TCCATTCCCAACTGGAAGCCAGTAGTTCACTTAGTGTATATAGCAGAGCCTCAAATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 5 (lower is better)
Translates to: SIPNWKPVVHLVYIAEPQIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...TTGAGGCTCTGCTATATACACTAAGTGAACTACTGGCTTCCAGTTGGGAATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTGGATACTGTAAGAGCTaGCTGCTTGAAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: NFISSNAQNIHGFVELASGYCKS*LLEALL
Trigger: AAGCAGGGCTTCAAGCAGCAAGCTCTTACAGTATCC...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATGCACCCTCTGCTAGCTaGTTCACCATATTAGCATTT +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINAPSAS*FTILAF
Trigger: AAATGCTAATATGGTGAACAAGCTAGCAGAGGGTGC...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINRVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTGAGTTGGATTAGACTATTACATGCTGGTGAAGTAAGCTGGCCTGGAAATTGTAAGTCAAAAGTTAGTTaGGTAACTCTTAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSWIRLLHAGEVSWPGNCKSKVS*VTLSLQ
Trigger: CTGGAGGCTAAGAGTTACCAAACTAACTTTTGACTT...ACAATTTCCAGGCCAGCTTACTTCACCAGCATGTAATAGTCTAATCCAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GGCATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGAATATACATGGTTTaGTGGAACTGGCTTCTATCC +
Preference number: 5 (lower is better)
Translates to: GIILKHEPNEALNIPTGSRIYMV*WNWLLS
Trigger: GGATAGAAGCCAGTTCCACAAAACCATGTATATTCT...GCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCGATGATGCAACCAACTaGGTCCAGCTGTATCACGTG +
Preference number: 5 (lower is better)
Translates to: LYISEKYRPEELNSCSVFDDATN*VQLYHV
Trigger: CACGTGATACAGCTGGACCAAGTTGGTTGCATCATC...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNAVSFL*ISSRRG
Trigger: ACCTCTGCGACTTGATATCAAAAGAAAGCTAACTGC...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYAVSFL*ISSRRG
Trigger: ACCTCTGCGACTTGATATCAAAAGAAAGCTAACTGC...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512242.6
ENST00000514508.2
CDS CCA 90 bp CTCCCAACGACACACAGAAAGGGAGAGGAAACAGTAACAAAAGTTTaGAAGCTGGAAAGCTGGTGGAGGAATATAAACATTTTGTTAAAA +
Preference number: 5 (lower is better)
Translates to: LPTTHRKGEETVTKV*KLESWWRNINILLK
Trigger: TTTTAACAAAATGTTTATATTCCTCCACCAGCTTTCCAGCTTCCAAACTTTTGTTACTGTTTCCTCTCCCTTTCTGTGTGTCGTTGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATCAAATTATCTTTCCATaGGCATCCATGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINQIIFP*ASMDMA
Trigger: TGCCATGTCCATGGATGCCAATGGAAAGATAATTTG...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AGACTTATCAAGAAGCACTCAGTCGCCATTCTGCAGCTTCCTAAAAATATTTTAGCAGATCCAAAGCTCTaGTTTCTCAATGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: RLIKKHSVAILQLPKNILADPKL*FLNAIA
Trigger: AGCAATGGCATTGAGAAACAAGAGCTTTGGATCTGC...TAAAATATTTTTAGGAAGCTGCAGAATGGCGACTGAGTGCTTCTTGATAAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTGTTGCTCTCTCTTATaGCATACTCTGAAGAATCGT +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYCCSLL*HTLKNR
Trigger: ACGATTCTTCAGAGTATGCAATAAGAGAGAGCAACA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTATGTTGCTCTCTCTTATaGCATACTCTGAAGAATCGT +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLCCSLL*HTLKNR
Trigger: ACGATTCTTCAGAGTATGCAATAAGAGAGAGCAACA...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCGTAAGAGCTTGCTGCTaGAAGCCCTGCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LYISEKYRPEELNSCSVFVRACC*KPCFSK
Trigger: TTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTAC...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCAATGCCACATTATTTTaGCCATCTCTCTCCGCACCC +
Preference number: 5 (lower is better)
Translates to: LYISEKYRPEELNSCSVFNATLF*PSLSAP
Trigger: GGGTGCGGAGAGAGATGGCAAAAATAATGTGGCATT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CTTCTAGTTCGAGTAAACTCTGCAGACAAAAGGAAGAGGGTAATTAAGTTTTACAGAGTTTCACTACCCTaGAAACCTGACTGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: LLVRVNSADKRKRVIKFYRVSLP*KPDWVS
Trigger: ACTTACCCAGTCAGGTTTCAAGGGTAGTGAAACTCT...GTAAAACTTAATTACCCTCTTCCTTTTGTCTGCAGAGTTTACTCGAACTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS-3UTR CAA 90 bp ATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATCTAAAGTCTGGTGTGTTTTaGTGTTACCAAATAGGGCAA +
Preference number: 5 (lower is better)
Translates to: MMWALCSQWSTAFTYKNLKSGVF*CYQIGQ
Trigger: TTGCCCTATTTGGTAACACAAAAACACACCAGACTT...TAGATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTAAGTCAAAAGTTAGTTaGGTAACTCTTAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVKSKVS*VTLSLQ
Trigger: CTGGAGGCTAAGAGTTACCAAACTAACTTTTGACTT...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS TCA 90 bp CCTACCAAGGCCTACCATGATTATAACATTTCAGTACAACAGAGATaGCATTCAGAAAGTTTCCACAGAGAAAAACCAGGTCATGTACTA +
Preference number: 5 (lower is better)
Translates to: PTKAYHDYNISVQQR*HSESFHREKPGHVL
Trigger: TAGTACATGACCTGGTTTTTCTCTGTGGAAACTTTCTGAATGTCATCTCTGTTGTACTGAAATGTTATAATCATGGTAGGCCTTGGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS-3UTR CAA 90 bp GAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATACCTATATTTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: EVSHSPKHCGQGSNQYLYLLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...ATATAGGTATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATTTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNLLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAGATGATGTGGGCATTGTGCTCCCAGTGGTCCACAGCATTTACATATAAAAATATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 5 (lower is better)
Translates to: KMMWALCSQWSTAFTYKNIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...ATTTTTATATGTAAATGCTGTGGACCACTGGGAGCACAATGCCCACATCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000507777.6
ENST00000510181.6
ENST00000512242.6
ENST00000512309.2
ENST00000514508.2
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCGCACCCTCTGCTAGCTaGTTCACCATATTAGCATTT +
Preference number: 5 (lower is better)
Translates to: LYISEKYRPEELNSCSVFAPSAS*FTILAF
Trigger: AAATGCTAATATGGTGAACAAGCTAGCAGAGGGTGC...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTAGAATATACATGGTTTaGTGGAACTGGCTTCTATCC +
Preference number: 5 (lower is better)
Translates to: IILKHEPNEALNIPTGSSRIYMV*WNWLLS
Trigger: GGATAGAAGCCAGTTCCACAAAACCATGTATATTCT...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATGAGATGGCAAATGGTGGGAAAGTGTCAGCTGTGTGAAAAGATAGTGATTGTTAAACATCAGTATGATTaGTCCCCATATTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: MRWQMVGKCQLCEKIVIVKHQYD*SPYFFS
Trigger: GCTGAAGAAATATGGGGACAAATCATACTGATGTTT...AACAATCACTATCTTTTCACACAGCTGACACTTTCCCACCATTTGCCATCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATATTCACTTTCATAAATaGGACACTTCCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINIHFHK*DTSCSD
Trigger: GTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAAT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATTATACTTAAGCATGAACCTAATGAAGCCCTGAACATACCAACAGGTAGCAGTTACTGGGAGGGAAGTTaGAGTACTTACTTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: IILKHEPNEALNIPTGSSYWEGS*STYLAF
Trigger: AAAAGCTAAGTAAGTACTCAAACTTCCCTCCCAGTA...ACTGCTACCTGTTGGTATGTTCAGGGCTTCATTAGGTTCATGCTTAAGTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCAGCTGTATTGTCATTTaGGAGCTGCATACCTCTCAA +
Preference number: 5 (lower is better)
Translates to: LYISEKYRPEELNSCSVFSCIVI*ELHTSQ
Trigger: TTGAGAGGTATGCAGCTCCAAAATGACAATACAGCT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTCAAGCCTTAGCTGTATaGTCATTTTGGAGCTGCATA +
Preference number: 5 (lower is better)
Translates to: NFISSNAQNIHGFVELASQALAV*SFWSCI
Trigger: TATGCAGCTCCAAAATGACAATACAGCTAAGGCTTG...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AAATCTAAGAAGTTTCTCATAGTCCAAAGCACTGTGGTCAGGGTAGCAATCAATAAACATCAGTATGATTaGTCCCCATATTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KSKKFLIVQSTVVRVAINKHQYD*SPYFFS
Trigger: GCTGAAGAAATATGGGGACAAATCATACTGATGTTT...ATTGATTGCTACCCTGACCACAGTGCTTTGGACTATGAGAAACTTCTTAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp ATTAGGATTCTGCACACATTTATTCCAGACTCAGTTCCCACTGTTGGTTTTTATATTCACTTTCATAAATaGGACACTTCCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: IRILHTFIPDSVPTVGFYIHFHK*DTSCSD
Trigger: GTCACTGCAGGAAGTGTCCAATTTATGAAAGTGAAT...ATAAAAACCAACAGTGGGAACTGAGTCTGGAATAAATGTGTGCAGAATCCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp AATTTCATCTCTTCTAATGCTCAGAATATACATGGTTTTGTGGAACTGGCTTCTTTGTTATCTTTGGGGTaGATCACAATCTGCATAACA +
Preference number: 5 (lower is better)
Translates to: NFISSNAQNIHGFVELASLLSLG*ITICIT
Trigger: TGTTATGCAGATTGTGATCAACCCCAAAGATAACAA...AGAAGCCAGTTCCACAAAACCATGTATATTCTGAGCATTAGAAGAGATGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp TTATACATTTCTGAGAAGTACAGACCAGAAGAACTGAATTCTTGTTCTGTCTTCATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 5 (lower is better)
Translates to: LYISEKYRPEELNSCSVFIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...GAAGACAGAACAAGAATTCAGTTCTTCTGGTCTGTACTTCTCAGAAATGTATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503326.6
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS-3UTR CAA 90 bp CCTACAAAGCAAAAATTATTACCCTACTCACTTTTCGTAGGCTACAAGGATATTATCTTTACAATGCTGTaGCTCTCTCTTATTGCATAC +
Preference number: 5 (lower is better)
Translates to: PTKQKLLPYSLFVGYKDIIFTML*LSLIAY
Trigger: GTATGCAATAAGAGAGAGCAACAGCATTGTAAAGAT...AATATCCTTGTAGCCTACGAAAAGTGAGTAGGGTAATAATTTTTGCTTTGTAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
CDS CCA 72 bp CGTAACCTATGGGACCCCGCTCCCTTCTACGGGATCTaGACCTACCATGGCTGCGTCGGTCCAATCCCGGGA +
Preference number: 6 (lower is better)
Translates to: RNLWDPAPFYGI*TYHGCVGPIPG
Trigger: TCCCGGGATTGGACCGACGCAGCCATGGTAGGTCCAGATCCCGTAGAAGGGAGCGGGGTCCCATAGGTTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510181.6
ENST00000512153.5
ENST00000513274.5
CDS GCA 72 bp CCCGCTCCCTTCTACGGGATCTGGACCTACCATGGCTaGGTCGGTCCAATCCCGGGAACCCTCGTTTGTTAC +
Preference number: 6 (lower is better)
Translates to: PAPFYGIWTYHG*VGPIPGTLVCY
Trigger: GTAACAAACGAGGGTTCCCGGGATTGGACCGACGCAGCCATGGTAGGTCCAGATCCCGTAGAAGGGAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510181.6
ENST00000512153.5
ENST00000513274.5
CDS CCA 72 bp CTCAGTCCAGAAGCTCCAGGAATCGGCCGTAACCTATaGGACCCCGCTCCCTTCTACGGGATCTGGACCTAC +
Preference number: 6 (lower is better)
Translates to: LSPEAPGIGRNL*DPAPFYGIWTY
Trigger: GTAGGTCCAGATCCCGTAGAAGGGAGCGGGGTCCCATAGGTTACGGCCGATTCCTGGAGCTTCTGGACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510181.6
ENST00000512153.5
ENST00000513274.5
CDS TCA 72 bp CCGGGAACCCTCGTTTGTTACCGGCTACTCAGGCCTTaGGATAAACCCACCGATCCACTGACCGTCAGACTG +
Preference number: 6 (lower is better)
Translates to: PGTLVCYRLLRP*DKPTDPLTVRL
Trigger: CAGTCTGACGGTCAGTGGATCGGTGGGTTTATCTCAAGGCCTGAGTAGCCGGTAACAAACGAGGGTTCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000333188.10
ENST00000503326.6
ENST00000504295.1
ENST00000510181.6
ENST00000512153.5
ENST00000512242.6
ENST00000512309.2
ENST00000513274.5
ENST00000514508.2
ENST00000515006.5
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
ENST00000677882.1
CDS CCA 72 bp GCTTTTAAACCAGGGGTCTCCCAAACAACCAGTCTGTaGCCTGTTAGGAATCAGGCCGCACAGCAGAGGGTG +
Preference number: 6 (lower is better)
Translates to: AFKPGVSQTTSL*PVRNQAAQQRV
Trigger: CACCCTCTGCTGTGCGGCCTGATTCCTAACAGGCCACAGACTGGTTGTTTGGGAGACCCCTGGTTTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS CCA 72 bp CTGGCCACTCACCGTGACAAGTGGGTATTGTTTGGCTaGCCACAGATCAGCATGTGTTTCCTTCACCCATTC +
Preference number: 6 (lower is better)
Translates to: LATHRDKWVLFG*PQISMCFLHPF
Trigger: GAATGGGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCACGGTGAGTGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502734.2
CDS CAA 72 bp ACATCCTGGCCACTCACCGTGACAAGTGGGTATTGTTaGGCTGGCCACAGATCAGCATGTGTTTCCTTCACC +
Preference number: 6 (lower is better)
Translates to: TSWPLTVTSGYC*AGHRSACVSFT
Trigger: GGTGAAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCACGGTGAGTGGCCAGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502734.2
CDS CCA 72 bp ATGAAGCTTGACATCCTGGCCACTCACCGTGACAAGTaGGTATTGTTTGGCTGGCCACAGATCAGCATGTGT +
Preference number: 6 (lower is better)
Translates to: MKLDILATHRDK*VLFGWPQISMC
Trigger: ACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCACGGTGAGTGGCCAGGATGTCAAGCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502734.2
CDS CAA 72 bp CTTGACATCCTGGCCACTCACCGTGACAAGTGGGTATaGTTTGGCTGGCCACAGATCAGCATGTGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: LDILATHRDKWV*FGWPQISMCFL
Trigger: AAGGAAACACATGCTGATCTGTGGCCAGCCAAACAATACCCACTTGTCACGGTGAGTGGCCAGGATGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502734.2
CDS CCA 72 bp TGGCCCAAATTATCTTTCCATTGGCATCCATGGACATaGCAGGTTCCTCCCGACCAAGCATCTTCTGAACCT +
Preference number: 6 (lower is better)
Translates to: WPKLSFHWHPWT*QVPPDQASSEP
Trigger: AGGTTCAGAAGATGCTTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677309.1
CDS TCA 72 bp GGAAGATGGGGTAGAGGGAGGTTTGAGTATGATGTCTaGCCTACCTTTTCTTCTTTGTTGGCTGTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: GRWGRGRFEYDV*PTFSSLLAVWE
Trigger: CTCCCACACAGCCAACAAAGAAGAAAAGGTAGGTCAGACATCATACTCAAACCTCCCTCTACCCCATCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512309.2
CDS CCA 72 bp AATGCTTGGCCCAAATTATCTTTCCATTGGCATCCATaGACATGGCAGGTTCCTCCCGACCAAGCATCTTCT +
Preference number: 6 (lower is better)
Translates to: NAWPKLSFHWHP*TWQVPPDQASS
Trigger: AGAAGATGCTTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677309.1
CDS CAA 72 bp CTCTTAACTCGATCAGATCTAGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGCGCGGCCCTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: LLTRSDLAVSFL*ISSRRGAALSP
Trigger: TGGACTGAGGGCCGCGCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGCTAGATCTGATCGAGTTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510181.6
ENST00000512153.5
CDS CCA 72 bp ACACACACTGCCATTGTAAAGACTTGCCAACATCCATaGCTCTGTAGGATGCAGATCCACACTCTTAACTCG +
Preference number: 6 (lower is better)
Translates to: THTAIVKTCQHP*LCRMQIHTLNS
Trigger: CGAGTTAAGAGTGTGGATCTGCATCCTACAGAGCCATGGATGTTGGCAAGTCTTTACAATGGCAGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000333188.10
ENST00000503326.6
ENST00000504295.1
ENST00000507777.6
ENST00000510181.6
ENST00000510491.5
ENST00000512153.5
ENST00000512242.6
ENST00000512309.2
ENST00000513274.5
ENST00000514508.2
ENST00000515006.5
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
ENST00000677882.1
CDS CAA 72 bp CTCTTAACTCGATCAGATCTAGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGCATGGCTGCGTCGGTC +
Preference number: 6 (lower is better)
Translates to: LLTRSDLAVSFL*ISSRRGMAASV
Trigger: GACCGACGCAGCCATGCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGCTAGATCTGATCGAGTTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333188.10
ENST00000503326.6
ENST00000504295.1
ENST00000512309.2
ENST00000515006.5
ENST00000677073.1
ENST00000677309.1
ENST00000677601.1
ENST00000677882.1
CDS TCA 72 bp ATGAAGTGCTCTACTGACCTGTTGAGCTGTAGATCTTaGGGGCTGAAAGTCTTTTCCCTCTTCCATGACATT +
Preference number: 6 (lower is better)
Translates to: MKCSTDLLSCRS*GLKVFSLFHDI
Trigger: AATGTCATGGAAGAGGGAAAAGACTTTCAGCCCTCAAGATCTACAGCTCAACAGGTCAGTAGAGCACTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502734.2
CDS TCA 72 bp GAAATCCATGATGAGAGCAGGAAAACCAGTGCAGTCTaGAGGAGACTAAGCAAACTGAAAGGAGATCTTCAG +
Preference number: 6 (lower is better)
Translates to: EIHDESRKTSAV*RRLSKLKGDLQ
Trigger: CTGAAGATCTCCTTTCAGTTTGCTTAGTCTCCTTCAGACTGCACTGGTTTTCCTGCTCTCATCATGGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS GCA 72 bp TGCCAAAATTTTAAGTTTCCTGAGGCCTCCCAGTCATaGTTCCTGTTAAGCCTGTGGAACTGTGAGTCAATT +
Preference number: 6 (lower is better)
Translates to: CQNFKFPEASQS*FLLSLWNCESI
Trigger: AATTGACTCACAGTTCCACAGGCTTAACAGGAAGCATGACTGGGAGGCCTCAGGAAACTTAAAATTTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504295.1
CDS GCA 72 bp AAACGATGCTCAGGATCTGTGGATACTGTAAGAGCTTaGTGCTTGAAGCCCTATTCCTTTATTGTTGGTCTC +
Preference number: 6 (lower is better)
Translates to: KRCSGSVDTVRA*CLKPYSFIVGL
Trigger: GAGACCAACAATAAAGGAATAGGGCTTCAAGCAGCAAGCTCTTACAGTATCCACAGATCCTGAGCATCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676700.1
CDS CCA 72 bp CACCGTGACTTATATGTTCCTCCGAGCTGCTCAGAATaGAATTATACACATAGGATAAAGGTAGAGACCCTC +
Preference number: 6 (lower is better)
Translates to: HRDLYVPPSCSE*NYTHRIKVETL
Trigger: GAGGGTCTCTACCTTTATCCTATGTGTATAATTCCATTCTGAGCAGCTCGGAGGAACATATAAGTCACGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504295.1
CDS CAA 72 bp CTCTTAACTCGATCAGATCTAGCAGTTAGCTTTCTTTaGATATCAAGTCGCAGAGGCGTCAGACTGACTGAC +
Preference number: 6 (lower is better)
Translates to: LLTRSDLAVSFL*ISSRRGVRLTD
Trigger: GTCAGTCAGTCTGACGCCTCTGCGACTTGATATCAAAAGAAAGCTAACTGCTAGATCTGATCGAGTTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507777.6
CDS CAA 72 bp CTAAAGAGTCTCCAGACCAGGAGATTCCAAGCACACTaGGAGGAAAAAGTACAGAGTATCAAAGGAAGACAG +
Preference number: 6 (lower is better)
Translates to: LKSLQTRRFQAH*EEKVQSIKGRQ
Trigger: CTGTCTTCCTTTGATACTCTGTACTTTTTCCTCCAAGTGTGCTTGGAATCTCCTGGTCTGGAGACTCTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS CAA 90 bp AGGGTTCTGTCTGGCTATATCTTCAGGATGGCTTTATCATCAAGTTaGAAATGTTTTAACTTCTCAGCTTATACAGGCTGCCAACCCGCC +
Preference number: 6 (lower is better)
Translates to: RVLSGYIFRMALSSS*KCFNFSAYTGCQPA
Trigger: GGCGGGTTGGCAGCCTGTATAAGCTGAGAAGTTAAAACATTTCAAACTTGATGATAAAGCCATCCTGAAGATATAGCCAGACAGAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS TCA 72 bp TCTAGGTTCTGTGCTCTTTATGAGACTCTTAATGCCTaGCGATCTGAGGTGGAACAGTTTCATCCTGAAATG +
Preference number: 6 (lower is better)
Translates to: SRFCALYETLNA*RSEVEQFHPEM
Trigger: CATTTCAGGATGAAACTGTTCCACCTCAGATCGTCAGGCATTAAGAGTCTCATAAAGAGCACAGAACCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS GCA 72 bp CCATTCCATAATTCAGTGTGCTCTCAAGCCGGTAGGTaGTTGAATGCCAAATACGTACTGTTCCTAAAAAGA +
Preference number: 6 (lower is better)
Translates to: PFHNSVCSQAGR*LNAKYVLFLKR
Trigger: TCTTTTTAGGAACAGTACGTATTTGGCATTCAAGCACCTACCGGCTTGAGAGCACACTGAATTATGGAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677601.1
ENST00000677882.1
CDS CCA 72 bp TTCCTAAAATTAAAAGTCTGTACCTTGAAACCTGACTaGGTAAGTAAGTTCGGGCCAAGAAGGCAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: FLKLKVCTLKPD*VSKFGPRRQLL
Trigger: CAGAAGCTGCCTTCTTGGCCCGAACTTACTTACCCAGTCAGGTTTCAAGGTACAGACTTTTAATTTTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502734.2
CDS CAA 72 bp AAAACGATGCTCAGGATCTGTGGATACTGTAAGAGCTaGCTGCTTGAAGCCCTATTCCTTTATTGTTGGTCT +
Preference number: 6 (lower is better)
Translates to: KTMLRICGYCKS*LLEALFLYCWS
Trigger: AGACCAACAATAAAGGAATAGGGCTTCAAGCAGCAAGCTCTTACAGTATCCACAGATCCTGAGCATCGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676700.1
CDS CAA 72 bp TTCCATAATTCAGTGTGCTCTCAAGCCGGTAGGTGCTaGAATGCCAAATACGTACTGTTCCTAAAAAGAACA +
Preference number: 6 (lower is better)
Translates to: FHNSVCSQAGRC*NAKYVLFLKRT
Trigger: TGTTCTTTTTAGGAACAGTACGTATTTGGCATTCAAGCACCTACCGGCTTGAGAGCACACTGAATTATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677601.1
ENST00000677882.1
CDS TCA 72 bp AGTAATAGGGACCGGTTCATAAGAACTGTCCTACTCTaGCTTTTCAAGCCAGAGTTCAAAGATTCTTTAGAC +
Preference number: 6 (lower is better)
Translates to: SNRDRFIRTVLL*LFKPEFKDSLD
Trigger: GTCTAAAGAATCTTTGAACTCTGGCTTGAAAAGTCAGAGTAGGACAGTTCTTATGAACCGGTCCCTATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504295.1
CDS TCA 72 bp CTGGCTATATCTTCAGGATGGCTTTATCATCAAGTTTaGAATGTTTTAACTTCTCAGCTTATACAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LAISSGWLYHQV*NVLTSQLIQAA
Trigger: GGCAGCCTGTATAAGCTGAGAAGTTAAAACATTTCAAACTTGATGATAAAGCCATCCTGAAGATATAGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS GCA 72 bp AGGATTTCCTGGGTAAAGTGTTTCCTATGTGCCAGATaGTTTCTACCCACAATTTCTTCTCACTATAATTTT +
Preference number: 6 (lower is better)
Translates to: RISWVKCFLCAR*FLPTISSHYNF
Trigger: AAAATTATAGTGAGAAGAAATTGTGGGTAGAAAGCATCTGGCACATAGGAAACACTTTACCCAGGAAATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS CAA 72 bp TCTGGCTATATCTTCAGGATGGCTTTATCATCAAGTTaGAAATGTTTTAACTTCTCAGCTTATACAGGCTGC +
Preference number: 6 (lower is better)
Translates to: SGYIFRMALSSS*KCFNFSAYTGC
Trigger: GCAGCCTGTATAAGCTGAGAAGTTAAAACATTTCAAACTTGATGATAAAGCCATCCTGAAGATATAGCCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677882.1
CDS TCA 72 bp TTTGAAGGATATGTTATTTACTCAGGTGAAAGAGAATaGGTCAAGCATTCAGGCAGACAATCTGTAAGATGT +
Preference number: 6 (lower is better)
Translates to: FEGYVIYSGERE*VKHSGRQSVRC
Trigger: ACATCTTACAGATTGTCTGCCTGAATGCTTGACTCATTCTCTTTCACCTGAGTAAATAACATATCCTTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504295.1
CDS GCA 72 bp TTAGACTTCAACAATAACTACAAGGCAATGGAACAATaGCTTCAAAATTCTGAGAGAAAATTACCTCCAACA +
Preference number: 6 (lower is better)
Translates to: LDFNNNYKAMEQ*LQNSERKLPPT
Trigger: TGTTGGAGGTAATTTTCTCTCAGAATTTTGAAGGCATTGTTCCATTGCCTTGTAGTTATTGTTGAAGTCTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677882.1