RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COPB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000129083

Ensembl transcript IDs: ENST00000249923.7, ENST00000439561.7, ENST00000525214.1, ENST00000526191.1, ENST00000526527.1, ENST00000529210.1, ENST00000529866.5, ENST00000532088.1, ENST00000533096.5, ENST00000533533.5, ENST00000534234.5, ENST00000534771.1

Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGACCCACCACGCCTCTaGGACTGGGGGCTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGDPPRL*DWGLVA
Trigger: GGCCACAAGCCCCCAGTCCCAGAGGCGTGGTGGGTC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249923.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCGTCTACTCCGGCTATaGACCGCAGCAGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFRLLRL*TAAAAA
Trigger: CGCCGCCGCTGCTGCGGTTCATAGCCGGAGTAGACG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249923.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGGCTCCGAGGGGCAGTaGTTTGGTGCAGCCGCGGAT +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGGSEGQ*FGAAAD
Trigger: ATCCGCGGCTGCACCAAACCACTGCCCCTCGGAGCC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACCACGCCTCTGGGACTaGGGGCTTGTGGCCCACTAC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGPRLWD*GLVAHY
Trigger: GTAGTGGGCCACAAGCCCCCAGTCCCAGAGGCGTGG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249923.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCGCGGATCCGTCTACTaGGGCTCCGTCTACTCCGGC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFRGSVY*GSVYSG
Trigger: GCCGGAGTAGACGGAGCCGCAGTAGACGGATCCGCG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGGGGCAGTGGTTTGGTaGAGCCGCGGATCCGTCTAC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGGAVVW*SRGSVY
Trigger: GTAGACGGATCCGCGGCTGCACCAAACCACTGCCCC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCGAGGGGCAGTGGTTTaGTGCAGCCGCGGATCCGTC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFRGAVV*CSRGSV
Trigger: GACGGATCCGCGGCTGCACCAAACCACTGCCCCTCG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTGGGACTGGGGGCTTGTaGCCCACTACCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLGTGGL*PTTRLR
Trigger: TCGGAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCC...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTGGGACTGGGGGCTTGTaGCCCACTACCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFGTGGL*PTTRLR
Trigger: TCGGAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCC...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTGGGGCAGTGGTTTGGTaGAGCCGCGGATCCGTCTAC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFGAVVW*SRGSVY
Trigger: GTAGACGGATCCGCGGCTGCACCAAACCACTGCCCC...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTTCACGCCTCTGGGACTaGGGGCTTGTGGCCCACTAC +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLSRLWD*GLVAHY
Trigger: GTAGTGGGCCACAAGCCCCCAGTCCCAGAGGCGTGA...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAGTTCTTCCGACTCTaGCCGACCCACCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLQFFRL*PTHHAS
Trigger: AGAGGCGTGGTGGGTCGGGCAGAGTCGGAAGAACTG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249923.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAAATCCGGTCCCTTCTaGCAGGCCCAGACGCAAGCG +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLKSGPF*QAQTQA
Trigger: CGCTTGCGTCTGGGCCTGGCAGAAGGGACCGGATTT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249923.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAAGAAAATCACGCCTCTaGGACTGGGGGCTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGRKSRL*DWGLVA
Trigger: GGCCACAAGCCCCCAGTCCCAGAGGCGTGATTTTCT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGCATCTGGTCCCTGGTaGATTGGCTTCTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGASGPW*IGFSML
Trigger: CAGCATTGAGAAGCCAATTCACCAGGGACCAGATGC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTGCATCTGGTCCCTGGTaGATTGGCTTCTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFASGPW*IGFSML
Trigger: CAGCATTGAGAAGCCAATTCACCAGGGACCAGATGC...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAAGCAGCAGCCTTGATTaGAGTTGGTGCACTAGAGAG +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGSSSLD*SWCTRE
Trigger: CTCTCTAGTGCACCAACTGCAATCAAGGCTGCTGCT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATCTTGGTCAGAGTTGTaGCAAGGGAGGCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGSWSEL*QGRQQQ
Trigger: TTGTTGCTGCCTCCCTTGCCACAACTCTGACCAAGA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGGTAACAGCAGCATCTaGTCCCTGGTGAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGGNSSI*SLVNWL
Trigger: AAGCCAATTCACCAGGGACCAGATGCTGCTGTTACC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAATTCGGCCCACATCTaGCGGAATTCTGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLNSAHI*RNSASV
Trigger: CACTGATGCAGAATTCCGTCAGATGTGGGCCGAATT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTGACATCAGCAGCTGCTaGTTCGTTGTTGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFDISSC*FVVVTE
Trigger: CTCAGTGACAACAACGAAGCAGCAGCTGCTGATGTC...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACATCTGACGGAATTCTaGATCAGTGCAAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGHLTEF*ISASCR
Trigger: CCTGCAACTTGCACTGATGCAGAATTCCGTCAGATG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAAGCCTTGATTGCAGTTaGTGCACTAGAGAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGSLDCS*CTRECH
Trigger: GTGACACTCTCTAGTGCACCAACTGCAATCAAGGCT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTTCTTGGTCAGAGTTGTaGCAAGGGAGGCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFSWSEL*QGRQQQ
Trigger: TTGTTGCTGCCTCCCTTGCCACAACTCTGACCAAGA...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTAGCGCAATGCAATCTTaGTCAGAGTTGTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFSAMQS*SELWQG
Trigger: CCCTTGCCACAACTCTGACCAAGATTGCATTGCGCT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTGGTAACAGCAGCATCTaGTCCCTGGTGAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLGNSSI*SLVNWL
Trigger: AAGCCAATTCACCAGGGACCAGATGCTGCTGTTACC...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAAGGTTATCAAAGCGCTaGATGGCTTCACGAACAAAC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGRLSKR*MASRTN
Trigger: GTTTGTTCGTGAAGCCATTCAGCGCTTTGATAACCT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCGGACAGAACAGGAATaGAATGTTCGCACTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFRTEQE*NVRTRS
Trigger: ACTCCTAGTGCGAACATTGCATTCCTGTTCTGTCCG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCAAGACATCAGCAGCTaGTGCTTCGTTGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFQDISS*CFVVVT
Trigger: AGTGACAACAACGAAGCAGCAGCTGCTGATGTCTTG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGACATCAGCAGCTaGTGCTTCGTTGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLQDISS*CFVVVT
Trigger: AGTGACAACAACGAAGCAGCAGCTGCTGATGTCTTG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGAGGATTTTCCCAAATaGAGGATAGTAGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGEDFPK*RIVAMS
Trigger: GCTCATGGCTACTATCCTGCATTTGGGAAAATCCTC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATGCATCAGTGCAAGTTaGAGGCTGGATATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGCISAS*RLDIVH
Trigger: ATGGACTATATCCAGCCTGCAACTTGCACTGATGCA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAAGCATAAAGGTTGGCTaGCATAAAGCCACAGTAACC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGSIKVG*HKATVT
Trigger: GGTTACTGTGGCTTTATGGCAGCCAACCTTTATGCT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACATTCCCTGGCTCTTTaGACGAATTCTTATATGGCC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGHSLAL*TNSYMA
Trigger: GGCCATATAAGAATTCGTGCAAAGAGCCAGGGAATG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAGCCTTGATTGCAGTTaGTGCACTAGAGAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLSLDCS*CTRECH
Trigger: GTGACACTCTCTAGTGCACCAACTGCAATCAAGGCT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATGGTCCCTGGTGAATTaGCTTCTCAATGCTGACATT +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGWSLVN*LLNADI
Trigger: AATGTCAGCATTGAGAAGCCAATTCACCAGGGACCA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGCACGAATTCTTATATaGCCGGTAACAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGARILI*PVTAAS
Trigger: AGATGCTGCTGTTACCGGCCATATAAGAATTCGTGC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAGGTTATCAAAGCGCTaGATGGCTTCACGAACAAAC +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLRLSKR*MASRTN
Trigger: GTTTGTTCGTGAAGCCATTCAGCGCTTTGATAACCT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATGCATATACAGGATCTaGGAAACCTGTCAATTGGGT +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGCIYRI*ETCQLG
Trigger: ACCCAATTGACAGGTTTCTCAGATCCTGTATATGCA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAATATTTGCGAAGTCATaGGGAGCAAGAGTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGIFAKS*GARVKG
Trigger: TCCTTTGACTCTTGCTCCTCATGACTTCGCAAATAT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGCTGGATATAGTCCATaGTGTCGATGTGAATATCAC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGAGYSP*CRCEYH
Trigger: GTGATATTCACATCGACATCATGGACTATATCCAGC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTAAGGGCACTCTGAGTTaGATAGGTACCCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFKGTLS*IGTHFS
Trigger: ACTGAAATGGGTACCTATGCAACTCAGAGTGCCCTT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAAGGGCACTCTGAGTTaGATAGGTACCCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLKGTLS*IGTHFS
Trigger: ACTGAAATGGGTACCTATGCAACTCAGAGTGCCCTT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTGAGGATTTTCCCAAATaGAGGATAGTAGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLEDFPK*RIVAMS
Trigger: GCTCATGGCTACTATCCTGCATTTGGGAAAATCCTC...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTTGCATCAGTGCAAGTTaGAGGCTGGATATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLCISAS*RLDIVH
Trigger: ATGGACTATATCCAGCCTGCAACTTGCACTGATGCA...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCATTCCCTGGCTCTTTaGACGAATTCTTATATGGCC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFHSLAL*TNSYMA
Trigger: GGCCATATAAGAATTCGTGCAAAGAGCCAGGGAATG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAATTTGCAGCCATATCTaGAAATCGGACAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGICSHI*KSDRTG
Trigger: TCCTGTTCTGTCCGATTTCCAGATATGGCTGCAAAT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATATCAAAGCGCTGAATaGCTTCACGAACAAACTCCA +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGYQSAE*LHEQTP
Trigger: TGGAGTTTGTTCGTGAAGCCATTCAGCGCTTTGATA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTTGGTCCCTGGTGAATTaGCTTCTCAATGCTGACATT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFWSLVN*LLNADI
Trigger: AATGTCAGCATTGAGAAGCCAATTCACCAGGGACCA...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTGCACGAATTCTTATATaGCCGGTAACAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLARILI*PVTAAS
Trigger: AGATGCTGCTGTTACCGGCCATATAAGAATTCGTGC...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCTTAAGGCCATTCCCTaGCTCTTTGCACGAATTCTT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLLKAIP*LFARIL
Trigger: AAGAATTCGTGCAAAGAGCCAGGGAATGGCCTTAAG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCTTAAGGCCATTCCCTaGCTCTTTGCACGAATTCTT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFLKAIP*LFARIL
Trigger: AAGAATTCGTGCAAAGAGCCAGGGAATGGCCTTAAG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGAGTACAAAAGATGTTaGAGTCCAGTAAGCCCATAC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGEYKRC*SPVSPY
Trigger: GTATGGGCTTACTGGACTCCAACATCTTTTGTACTC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTTTCAGATGGTGGTTCTaGATCCATTGGCACGTTAAT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLFRWWF*IHWHVN
Trigger: ATTAACGTGCCAATGGATTCAGAACCACCATCTGAA...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTTTCAGATGGTGGTTCTaGATCCATTGGCACGTTAAT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFFRWWF*IHWHVN
Trigger: ATTAACGTGCCAATGGATTCAGAACCACCATCTGAA...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTAAAACGAGCTCTTTCTaGTGGATTAGCATGACAGAC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFKTSSF*WISMTD
Trigger: GTCTGTCATGCTAATCCATCAGAAAGAGCTCGTTTT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAAAACGAGCTCTTTCTaGTGGATTAGCATGACAGAC +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLKTSSF*WISMTD
Trigger: GTCTGTCATGCTAATCCATCAGAAAGAGCTCGTTTT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAAGCGATCCAAAACTATaGGTTTTACATTGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGSDPKL*VLHCCR
Trigger: GCGACAACAATGTAAAACTCATAGTTTTGGATCGCT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATGTAGTACTCGTTCATaGGCAGGATGCTCTTTTAAT +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGCSTRS*AGCSFN
Trigger: ATTAAAAGAGCATCCTGCTCATGAACGAGTACTACA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTCGTTGTTGTCACTaGGAAATTCCATTAACACAG +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGLRCCH*EIPLTQ
Trigger: CTGTGTTAATGGAATTTCTCAGTGACAACAACGAAG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATCAGTAACCAATTTCTaGACTGGCCCTACAGTTATT +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGSVTNF*TGPTVI
Trigger: AATAACTGTAGGGCCAGTTCAGAAATTGGTTACTGA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTTTAGCAGATAACATGTaGGAAAGGGACTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLLADNM*ERDCLH
Trigger: ATGCAGACAGTCCCTTTCTCACATGTTATCTGCTAA...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTTCCATGATGTCGATGTaGATATCACTGAGAACCACA +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFSMMSM*ISLRTT
Trigger: TGTGGTTCTCAGTGATATTCACATCGACATCATGGA...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTTCCATGATGTCGATGTaGATATCACTGAGAACCACA +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLSMMSM*ISLRTT
Trigger: TGTGGTTCTCAGTGATATTCACATCGACATCATGGA...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTTTGGCTTCTCAATGCTaGCATTTGCAAGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLLASQC*HLQVHL
Trigger: AAGATGCACTTGCAAATGTCAGCATTGAGAAGCCAA...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTTTGGCTTCTCAATGCTaGCATTTGCAAGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFLASQC*HLQVHL
Trigger: AAGATGCACTTGCAAATGTCAGCATTGAGAAGCCAA...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAAGATCCAGTGCTAACTaGAGAGTTTTCTTTCGTACT +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGRSSAN*RVFFRT
Trigger: AGTACGAAAGAAAACTCTGCAGTTAGCACTGGATCT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACACAGGAATAACATTTaGAGCCATATCTGGAAATCG +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGHRNNI*SHIWKS
Trigger: CGATTTCCAGATATGGCTGCAAATGTTATTCCTGTG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAGCTACATAGCGCAATaGAATCTTGGTCAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLSYIAQ*NLGQSC
Trigger: ACAACTCTGACCAAGATTGCATTGCGCTATGTAGCT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTAGCTACATAGCGCAATaGAATCTTGGTCAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFSYIAQ*NLGQSC
Trigger: ACAACTCTGACCAAGATTGCATTGCGCTATGTAGCT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATTCTTAGCAGTTAGTTaGATGAAGGAAATGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGFLAVS*MKEMGS
Trigger: TGACCCCATTTCCTTCATGCAACTAACTGCTAAGAA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGCTGACATTTGCAAGTaGATCTTCACCAAATATGGA +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGADICK*IFTKYG
Trigger: TCCATATTTGGTGAAGATGCACTTGCAAATGTCAGC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTATTTGCAGCCATATCTaGAAATCGGACAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFICSHI*KSDRTG
Trigger: TCCTGTTCTGTCCGATTTCCAGATATGGCTGCAAAT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACATCTTCACCAAATATaGAACGAGCATAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGHLHQI*NEHKGW
Trigger: CCAACCTTTATGCTCGTTCCATATTTGGTGAAGATG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTGAGTACAAAAGATGTTaGAGTCCAGTAAGCCCATAC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFEYKRC*SPVSPY
Trigger: GTATGGGCTTACTGGACTCCAACATCTTTTGTACTC...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTAGCGATCCAAAACTATaGGTTTTACATTGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFSDPKL*VLHCCR
Trigger: GCGACAACAATGTAAAACTCATAGTTTTGGATCGCT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTTGTAGTACTCGTTCATaGGCAGGATGCTCTTTTAAT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFCSTRS*AGCSFN
Trigger: ATTAAAAGAGCATCCTGCTCATGAACGAGTACTACA...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCTTCGTTGTTGTCACTaGGAAATTCCATTAACACAG +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFLRCCH*EIPLTQ
Trigger: CTGTGTTAATGGAATTTCTCAGTGACAACAACGAAG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTTCAGTAACCAATTTCTaGACTGGCCCTACAGTTATT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFSVTNF*TGPTVI
Trigger: AATAACTGTAGGGCCAGTTCAGAAATTGGTTACTGA...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACAATATCATATTGGTTaGCATGAACGTAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGQYHIG*HERKLL
Trigger: CAGAAGCTTACGTTCATGTCAACCAATATGATATTG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCTGTTTATTGTACTGTaGAAAGGGTCTTGGTACATG +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLLFIVL*KGSWYM
Trigger: CATGTACCAAGACCCTTTTCACAGTACAATAAACAG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCTGTTTATTGTACTGTaGAAAGGGTCTTGGTACATG +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFLFIVL*KGSWYM
Trigger: CATGTACCAAGACCCTTTTCACAGTACAATAAACAG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTATTCCTTTTGCAACTTaGATCCTTCTCATTCACCAG +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLIPFAT*ILLIHQ
Trigger: CTGGTGAATGAGAAGGATGCAAGTTGCAAAAGGAAT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTAGATCCAGTGCTAACTaGAGAGTTTTCTTTCGTACT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFRSSAN*RVFFRT
Trigger: AGTACGAAAGAAAACTCTGCAGTTAGCACTGGATCT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCACAGGAATAACATTTaGAGCCATATCTGGAAATCG +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFHRNNI*SHIWKS
Trigger: CGATTTCCAGATATGGCTGCAAATGTTATTCCTGTG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTATTTCTGTCACTTGCTaGTCCAGAGACATCATAAAC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFISVTC*SRDIIN
Trigger: GTTTATGATGTCTCTGGAGCAGCAAGTGACAGAAAT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTACAATTTCTGTCACTTaGTGCTCCAGAGACATCATA +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFTISVT*CSRDII
Trigger: TATGATGTCTCTGGAGCAGCAAGTGACAGAAATTGT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTACAATTTCTGTCACTTaGTGCTCCAGAGACATCATA +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLTISVT*CSRDII
Trigger: TATGATGTCTCTGGAGCAGCAAGTGACAGAAATTGT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCTCAATGCTGACATTTaGAAGTGCATCTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFLNADI*KCIFTK
Trigger: TTTGGTGAAGATGCACTTGCAAATGTCAGCATTGAG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCGCCGTCATGGTTTCTaGTTATATTATAACCAATCC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFRRHGF*LYYNQS
Trigger: GGATTGGTTATAATATAACCAGAAACCATGACGGCG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTTCTGAATGTCTTCCTTaGTACTACAGTATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLSECLP*YYSILP
Trigger: TGGGAGAATACTGTAGTACCAAGGAAGACATTCAGA...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTTCTGAATGTCTTCCTTaGTACTACAGTATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFSECLP*YYSILP
Trigger: TGGGAGAATACTGTAGTACCAAGGAAGACATTCAGA...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGAGAAACCTGTCAATTaGGTGACCTTGTTAAGTTTA +
Preference number: 4 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGEKPVN*VTLLSL
Trigger: TAAACTTAACAAGGTCACCCAATTGACAGGTTTCTC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAGAAAGGGCCTTTTCTaGAGTCAGGCATTTCATATT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLRKGLF*SQAFHI
Trigger: AATATGAAATGCCTGACTCCAGAAAAGGCCCTTTCT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCATCTTCACCAAATATaGAACGAGCATAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLHLHQI*NEHKGW
Trigger: CCAACCTTTATGCTCGTTCCATATTTGGTGAAGATG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAAGCTTCAGTCTTTaGCTTTACATCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLQSFSL*LYISFF
Trigger: GAAAAAGGAGATGTAAAGTCAAAGACTGAAGCTTTG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCAAAGCTTCAGTCTTTaGCTTTACATCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFQSFSL*LYISFF
Trigger: GAAAAAGGAGATGTAAAGTCAAAGACTGAAGCTTTG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR TCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAATATCATATTGGTTaGCATGAACGTAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLQYHIG*HERKLL
Trigger: CAGAAGCTTACGTTCATGTCAACCAATATGATATTG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCTTCTAAGTCTGGTGTaGTCAATACTCTTAGGATAT +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLLLSLV*SILLGY
Trigger: ATATCCTAAGAGTATTGAGCACACCAGACTTAGAAG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCTTCTAAGTCTGGTGTaGTCAATACTCTTAGGATAT +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFLLSLV*SILLGY
Trigger: ATATCCTAAGAGTATTGAGCACACCAGACTTAGAAG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTGTTAGCTTTAATATTTaGGAAGTCATGAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLVSFNI*EVMRSK
Trigger: CTTGCTCCTCATGACTTCGCAAATATTAAAGCTAAC...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR GCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTGTTAGCTTTAATATTTaGGAAGTCATGAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFVSFNI*EVMRSK
Trigger: CTTGCTCCTCATGACTTCGCAAATATTAAAGCTAAC...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTATCATCATCAGTAATTaGCTTCTTAGGAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFIIISN*LLRKRG
Trigger: TCCTCTCTTCCTAAGAAGCCAATTACTGATGATGAT...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAAAGTATCACTGGTTTaGTTCACAACAAGTACATCC +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLKVSLV*FTTSTS
Trigger: GGATGTACTTGTTGTGAACCAAACCAGTGATACTTT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CCA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTTCTGCAAAGTATCACTaGTTTGGTTCACAACAAGTA +
Preference number: 4 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLSAKYH*FGSQQV
Trigger: TACTTGTTGTGAACCAAACCAGTGATACTTTGCAGA...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS GCA 90 bp AGGCTCCGAGGGGCAGTGGTTTGGTGCAGCCGCGGATCCGTCTACTaGGGCTCCGTCTACTCCGGCTATGAACCGCAGCAGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: RLRGAVVWCSRGSVY*GSVYSGYEPQQRRR
Trigger: CCGCCGCCGCTGCTGCGGTTCATAGCCGGAGTAGACGGAGCCGCAGTAGACGGATCCGCGGCTGCACCAAACCACTGCCCCTCGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000529210.1
ENST00000529866.5
CDS CCA 90 bp TTCCGACTCTGCCCGACCCACCACGCCTCTGGGACTGGGGGCTTGTaGCCCACTACCAGGCTCCGAGGGGCAGTGGTTTGGTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: FRLCPTHHASGTGGL*PTTRLRGAVVWCSR
Trigger: GCGGCTGCACCAAACCACTGCCCCTCGGAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCCAGAGGCGTGGTGGGTCGGGCAGAGTCGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000529866.5
CDS CCA 90 bp CTGGGACTGGGGGCTTGTGGCCCACTACCAGGCTCCGAGGGGCAGTaGTTTGGTGCAGCCGCGGATCCGTCTACTGCGGCTCCGTCTACT +
Preference number: 5 (lower is better)
Translates to: LGLGACGPLPGSEGQ*FGAAADPSTAAPST
Trigger: AGTAGACGGAGCCGCAGTAGACGGATCCGCGGCTGCACCAAACCACTGCCCCTCGGAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000529210.1
ENST00000529866.5
ENST00000533533.5
CDS CCA 90 bp GCTAGAAAGCCAGTTCTTCCGACTCTGCCCGACCCACCACGCCTCTaGGACTGGGGGCTTGTGGCCCACTACCAGGCTCCGAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: ARKPVLPTLPDPPRL*DWGLVAHYQAPRGS
Trigger: ACTGCCCCTCGGAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCCAGAGGCGTGGTGGGTCGGGCAGAGTCGGAAGAACTGGCTTTCTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000529866.5
CDS GCA 90 bp CTCCCCTTCCGCATCTTCCAGCTAGAAAGCCAGTTCTTCCGACTCTaGCCGACCCACCACGCCTCTGGGACTGGGGGCTTGTGGCCCACT +
Preference number: 5 (lower is better)
Translates to: LPFRIFQLESQFFRL*PTHHASGTGGLWPT
Trigger: AGTGGGCCACAAGCCCCCAGTCCCAGAGGCGTGGTGGGTCGGGCAGAGTCGGAAGAACTGGCTTTCTAGCTGGAAGATGCGGAAGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000529866.5
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCCGAGGGGCAGTGGTTaGGTGCAGCCGCGGATCCGT +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLPRGSG*VQPRIR
Trigger: ACGGATCCGCGGCTGCACCAAACCACTGCCCCTCGG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCCGAGGGGCAGTGGTTaGGTGCAGCCGCGGATCCGT +
Preference number: 5 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFPRGSG*VQPRIR
Trigger: ACGGATCCGCGGCTGCACCAAACCACTGCCCCTCGG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS CCA 90 bp CTGGCTCTTTGCACGAATTCTTATATGGCCGGTAACAGCAGCATCTaGTCCCTGGTGAATTGGCTTCTCAATGCTGACATTTGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: LALCTNSYMAGNSSI*SLVNWLLNADICKC
Trigger: GCACTTGCAAATGTCAGCATTGAGAAGCCAATTCACCAGGGACCAGATGCTGCTGTTACCGGCCATATAAGAATTCGTGCAAAGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000525214.1
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTTCTGGGACTGGGGGCTaGTGGCCCACTACCAGGCTC +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLSGTGG*WPTTRL
Trigger: GAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCCAGA...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTTCTGGGACTGGGGGCTaGTGGCCCACTACCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFSGTGG*WPTTRL
Trigger: GAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCCAGA...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS GCA 90 bp AAGGATGCCAGAAAATGGCGACTCAGAGAGGACATGCTTTCTTTGTaGAGCGCTTGCGCGCTGCAAGTATATCCTATTTTCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: KDARKWRLREDMLSL*SACALQVYPIFFLF
Trigger: GAAGAGGAAGAAAATAGGATATACTTGCAGCGCGCAAGCGCTGCACAAAGAAAGCATGTCCTCTCTGAGTCGCCATTTTCTGGCATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534771.1
CDS CCA 90 bp CAAGGGACCTGCGGATCTCAGTCATCACACTCTGAATGTCTTCCTTaGTACTACAGTATTCTCCCAGGATCCATAATGCTCCTCGGTAAA +
Preference number: 5 (lower is better)
Translates to: QGTCGSQSSHSECLP*YYSILPGSIMLLGK
Trigger: TTTACCGAGGAGCATTATGGATCCTGGGAGAATACTGTAGTACCAAGGAAGACATTCAGAGTGTGATGACTGAGATCCGCAGGTCCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS CCA 90 bp CCTGAACCAAAGCTACATAGCGCAATGCAATCTTGGTCAGAGTTGTaGCAAGGGAGGCAGCAACAAAGAAATCTCCATCCAGAAGGAATC +
Preference number: 5 (lower is better)
Translates to: PEPKLHSAMQSWSEL*QGRQQQRNLHPEGI
Trigger: GATTCCTTCTGGATGGAGATTTCTTTGTTGCTGCCTCCCTTGCCACAACTCTGACCAAGATTGCATTGCGCTATGTAGCTTTGGTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526191.1
CDS TCA 90 bp ATTGGGATCTCTCCAAGGGACCTGCGGATCTCAGTCATCACACTCTaGATGTCTTCCTTGGTACTACAGTATTCTCCCAGGATCCATAAT +
Preference number: 5 (lower is better)
Translates to: IGISPRDLRISVITL*MSSLVLQYSPRIHN
Trigger: ATTATGGATCCTGGGAGAATACTGTAGTACCAAGGAAGACATTCAGAGTGTGATGACTGAGATCCGCAGGTCCCTTGGAGAGATCCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS GCA 90 bp TTCCTCTTTCTTGGTGGGTCTAGAACTGCTAAGGGCACTCTGAGTTaGATAGGTACCCATTTCAGTAACCAATTTCTGAACTGGCCCTAC +
Preference number: 5 (lower is better)
Translates to: FLFLGGSRTAKGTLS*IGTHFSNQFLNWPY
Trigger: GTAGGGCCAGTTCAGAAATTGGTTACTGAAATGGGTACCTATGCAACTCAGAGTGCCCTTAGCAGTTCTAGACCCACCAAGAAAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS GCA 90 bp AGCAGCATCTGGTCCCTGGTGAATTGGCTTCTCAATGCTGACATTTaGAAGTGCATCTTCACCAAATATGGAACGAGCATAAAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: SSIWSLVNWLLNADI*KCIFTKYGTSIKVG
Trigger: GCCAACCTTTATGCTCGTTCCATATTTGGTGAAGATGCACTTGCAAATGTCAGCATTGAGAAGCCAATTCACCAGGGACCAGATGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000525214.1
CDS GCA 90 bp TTCAAATTCGGCCCACATCTGACGGAATTCTGCATCAGTGCAAGTTaGAGGCTGGATATAGTCCATGATGTCGATGTGAATATCACTGAG +
Preference number: 5 (lower is better)
Translates to: FKFGPHLTEFCISAS*RLDIVHDVDVNITE
Trigger: CTCAGTGATATTCACATCGACATCATGGACTATATCCAGCCTGCAACTTGCACTGATGCAGAATTCCGTCAGATGTGGGCCGAATTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526527.1
CDS GCA 90 bp CACTTTGTTTTCCCATTCAAATTCGGCCCACATCTGACGGAATTCTaGATCAGTGCAAGTTGCAGGCTGGATATAGTCCATGATGTCGAT +
Preference number: 5 (lower is better)
Translates to: HFVFPFKFGPHLTEF*ISASCRLDIVHDVD
Trigger: ATCGACATCATGGACTATATCCAGCCTGCAACTTGCACTGATGCAGAATTCCGTCAGATGTGGGCCGAATTTGAATGGGAAAACAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526527.1
CDS GCA 90 bp ATCTGGTCCCTGGTGAATTGGCTTCTCAATGCTGACATTTGCAAGTaGATCTTCACCAAATATGGAACGAGCATAAAGGTTGGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: IWSLVNWLLNADICK*IFTKYGTSIKVGCH
Trigger: ATGGCAGCCAACCTTTATGCTCGTTCCATATTTGGTGAAGATGCACTTGCAAATGTCAGCATTGAGAAGCCAATTCACCAGGGACCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000525214.1
CDS GCA 90 bp GCTGCCATGGGAGCACCACCATTCTTGCTTAGTCTCTTTGCAATTTaGTGTCAACAACTTACTGTCAGTGTGCAAACGTACAGTTCACAT +
Preference number: 5 (lower is better)
Translates to: AAMGAPPFLLSLFAI*CQQLTVSVQTYSSH
Trigger: ATGTGAACTGTACGTTTGCACACTGACAGTAAGTTGTTGACAGCAAATTGCAAAGAGACTAAGCAAGAATGGTGGTGCTCCCATGGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532088.1
CDS CCA 90 bp GCTTTTTCTTCTCCTGAACCAAAGCTACATAGCGCAATGCAATCTTaGTCAGAGTTGTGGCAAGGGAGGCAGCAACAAAGAAATCTCCAT +
Preference number: 5 (lower is better)
Translates to: AFSSPEPKLHSAMQS*SELWQGRQQQRNLH
Trigger: ATGGAGATTTCTTTGTTGCTGCCTCCCTTGCCACAACTCTGACCAAGATTGCATTGCGCTATGTAGCTTTGGTTCAGGAGAAGAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526191.1
CDS TCA 90 bp TCAAGCATCTTCTCAACAATAAGCATTCTCAGGTTATCAAAGCGCTaGATGGCTTCACGAACAAACTCCAAGACATCAGCAGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSIFSTISILRLSKR*MASRTNSKTSAAAA
Trigger: AGCAGCAGCTGCTGATGTCTTGGAGTTTGTTCGTGAAGCCATTCAGCGCTTTGATAACCTGAGAATGCTTATTGTTGAGAAGATGCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACAATCTTGGTCAGAGTaGTGGCAAGGGAGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGQSWSE*WQGRQQ
Trigger: TTGCTGCCTCCCTTGCCACAACTCTGACCAAGATTG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS CCA 90 bp AATTCTTATATGGCCGGTAACAGCAGCATCTGGTCCCTGGTGAATTaGCTTCTCAATGCTGACATTTGCAAGTGCATCTTCACCAAATAT +
Preference number: 5 (lower is better)
Translates to: NSYMAGNSSIWSLVN*LLNADICKCIFTKY
Trigger: ATATTTGGTGAAGATGCACTTGCAAATGTCAGCATTGAGAAGCCAATTCACCAGGGACCAGATGCTGCTGTTACCGGCCATATAAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000525214.1
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTGCATCAGTGCAAGTaGCAGGCTGGATATAGTCCA +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGLHQCK*QAGYSP
Trigger: TGGACTATATCCAGCCTGCAACTTGCACTGATGCAG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS TCA 90 bp GAGAAGGACATTTCCTTCACTGGTCCTGAACTAATCCCAGCAAACTaGGGTGACTTCATAAATCCTTTCTCTTCCACTGGAATAATCACA +
Preference number: 5 (lower is better)
Translates to: EKDISFTGPELIPAN*GDFINPFSSTGIIT
Trigger: TGTGATTATTCCAGTGGAAGAGAAAGGATTTATGAAGTCACCTCAGTTTGCTGGGATTAGTTCAGGACCAGTGAAGGAAATGTCCTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526191.1
CDS-3UTR CAA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTGCAGCTGCTGCTTCGTaGTTGTCACTGAGAAATTCC +
Preference number: 5 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFAAAAS*LSLRNS
Trigger: GGAATTTCTCAGTGACAACAACGAAGCAGCAGCTGC...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATTTCTGACTCTACAATaGGGATCTCTCCAAGGGACC +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGFLTLQ*GSLQGT
Trigger: GGTCCCTTGGAGAGATCCCAATTGTAGAGTCAGAAA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACATTCAGACAAGACCTaGAGGCACAGGGAAATTCGA +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGHSDKT*RHREIR
Trigger: TCGAATTTCCCTGTGCCTCAAGGTCTTGTCTGAATG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGATCTGTGTGTTACCCATaGCTGCCAGTAAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGSVCYP*LPVNSA
Trigger: AGCTGAGTTTACTGGCAGCAATGGGTAACACACAGA...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCTGCATCAGTGCAAGTaGCAGGCTGGATATAGTCCA +
Preference number: 5 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFLHQCK*QAGYSP
Trigger: TGGACTATATCCAGCCTGCAACTTGCACTGATGCAG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS TCA 90 bp TCTGTTGATGCTACTTTGACGTTAGCTTTAATATTTGCGAAGTCATaGGGAGCAAGAGTCAAAGGAGACGGCTTTTCCACAAGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: SVDATLTLALIFAKS*GARVKGDGFSTSFR
Trigger: TCTGAAACTTGTGGAAAAGCCGTCTCCTTTGACTCTTGCTCCTCATGACTTCGCAAATATTAAAGCTAACGTCAAAGTAGCATCAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS GCA 90 bp GGAATAACATTTGCAGCCATATCTGGAAATCGGACAGAACAGGAATaGAATGTTCGCACTAGGAGTTGTCTGTATTTGTCAGTATCTTCA +
Preference number: 5 (lower is better)
Translates to: GITFAAISGNRTEQE*NVRTRSCLYLSVSS
Trigger: TGAAGATACTGACAAATACAGACAACTCCTAGTGCGAACATTGCATTCCTGTTCTGTCCGATTTCCAGATATGGCTGCAAATGTTATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS GCA 90 bp ACAAGTTTCAGATCCCCTAGTGTAGCTAGTTCTAATGTGCAATTCTaGAAAGTATCACTGGTTTGGTTCACAACAAGTACATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: TSFRSPSVASSNVQF*KVSLVWFTTSTSRT
Trigger: TGTCCTGGATGTACTTGTTGTGAACCAAACCAGTGATACTTTGCAGAATTGCACATTAGAACTAGCTACACTAGGGGATCTGAAACTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGCTGCTGCTTCGTTGTaGTCACTGAGAAATTCCATT +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGAAASL*SLRNSI
Trigger: AATGGAATTTCTCAGTGACAACAACGAAGCAGCAGC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCTGTCTTCCTCTTTCTaGGTGGGTCTAGAACTGCTA +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLLSSSF*VGLELL
Trigger: TAGCAGTTCTAGACCCACCAAGAAAGAGGAAGACAG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCATTCAGACAAGACCTaGAGGCACAGGGAAATTCGA +
Preference number: 5 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFHSDKT*RHREIR
Trigger: TCGAATTTCCCTGTGCCTCAAGGTCTTGTCTGAATG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCCATTCCCTGGCTCTTaGCACGAATTCTTATATGGC +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLPFPGS*HEFLYG
Trigger: GCCATATAAGAATTCGTGCAAAGAGCCAGGGAATGG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS TCA 90 bp TGGTTTGGTTCACAACAAGTACATCCAGGACAATATCATATTGGTTaGCATGAACGTAAGCTTCTGCATATACAGGATCTGAGAAACCTG +
Preference number: 5 (lower is better)
Translates to: WFGSQQVHPGQYHIG*HERKLLHIQDLRNL
Trigger: CAGGTTTCTCAGATCCTGTATATGCAGAAGCTTACGTTCATGTCAACCAATATGATATTGTCCTGGATGTACTTGTTGTGAACCAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCACAATTTCTGTCACTaGCTGCTCCAGAGACATCAT +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLHNFCH*LLQRHH
Trigger: ATGATGTCTCTGGAGCAGCAAGTGACAGAAATTGTG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTCACAATTTCTGTCACTaGCTGCTCCAGAGACATCAT +
Preference number: 5 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFHNFCH*LLQRHH
Trigger: ATGATGTCTCTGGAGCAGCAAGTGACAGAAATTGTG...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAAGAGTACAAAAGATGTaGGAGTCCAGTAAGCCCATA +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGRVQKM*ESSKPI
Trigger: TATGGGCTTACTGGACTCCAACATCTTTTGTACTCT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCATTCCTTTTGCAACTaGCATCCTTCTCATTCACCA +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLHSFCN*HPSHSP
Trigger: TGGTGAATGAGAAGGATGCAAGTTGCAAAAGGAATG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACAAAGTATCACTGGTTaGGTTCACAACAAGTACATC +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGQSITG*VHNKYI
Trigger: GATGTACTTGTTGTGAACCAAACCAGTGATACTTTG...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTAGAGTACAAAAGATGTaGGAGTCCAGTAAGCCCATA +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLRVQKM*ESSKPI
Trigger: TATGGGCTTACTGGACTCCAACATCTTTTGTACTCT...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS CCA 90 bp AGTGTAGCTAGTTCTAATGTGCAATTCTGCAAAGTATCACTGGTTTaGTTCACAACAAGTACATCCAGGACAATATCATATTGGTTGACA +
Preference number: 5 (lower is better)
Translates to: SVASSNVQFCKVSLV*FTTSTSRTISYWLT
Trigger: TGTCAACCAATATGATATTGTCCTGGATGTACTTGTTGTGAACCAAACCAGTGATACTTTGCAGAATTGCACATTAGAACTAGCTACACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAATAAATGCATTCCTTTaGCAACTTGCATCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGINAFL*QLASFS
Trigger: TGAGAAGGATGCAAGTTGCAAAAGGAATGCATTTAT...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAGGACAATATCATATaGGTTGACATGAACGTAAGC +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLQDNII*VDMNVS
Trigger: GCTTACGTTCATGTCAACCAATATGATATTGTCCTG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAAGTATCACTGGTTaGGTTCACAACAAGTACATC +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLQSITG*VHNKYI
Trigger: GATGTACTTGTTGTGAACCAAACCAGTGATACTTTG...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGTGTTAACTGTCACTTaGTTTTCCCATTCAAATTCG +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGVLTVT*FSHSNS
Trigger: CGAATTTGAATGGGAAAACAAAGTGACAGTTAACAC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp AAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGAGTCAGGCATTTCATATaGGTTGACTTTAATATGTGC +
Preference number: 5 (lower is better)
Translates to: KMLESSKPIPKLTVKLQGVRHFI*VDFNMC
Trigger: GCACATATTAAAGTCAACCAATATGAAATGCCTGAC...TCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS GCA 90 bp AGTGACAAGGTTCTCCACCTGGTTCTCCACCAAATAATCTGTCTTTaGTCAAGTCATTTATCTCTGGAAATCAGACTCTTTATATATAAT +
Preference number: 5 (lower is better)
Translates to: SDKVLHLVLHQIICL*SSHLSLEIRLFIYN
Trigger: ATTATATATAAAGAGTCTGATTTCCAGAGATAAATGACTTGAGCAAAGACAGATTATTTGGTGGAGAACCAGGTGGAGAACCTTGTCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529210.1
ENST00000533096.5
ENST00000533533.5
CDS-3UTR CAA 90 bp TTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTCAAGGACTTTTTGTGTTAACTGTCACTTaGTTTTCCCATTCAAATTCG +
Preference number: 5 (lower is better)
Translates to: LESSKPIPKLTVKLQGLFVLTVT*FSHSNS
Trigger: CGAATTTGAATGGGAAAACAAAGTGACAGTTAACAC...AAAAAGTCCTTGAAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS-3UTR CAA 90 bp GTACAAAAGATGTTGGAGTCCAGTAAGCCCATACCTAAATTAACTGTAAAGCTTGTCAGGCATTTCATATaGGTTGACTTTAATATGTGC +
Preference number: 5 (lower is better)
Translates to: VQKMLESSKPIPKLTVKLVRHFI*VDFNMC
Trigger: GCACATATTAAAGTCAACCAATATGAAATGCCTGAC...AAGCTTTACAGTTAATTTAGGTATGGGCTTACTGGACTCCAACATCTTTTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS CCA 72 bp CTTCCGACTCTGCCCGACCCACCACGCCTCTGGGACTaGGGGCTTGTGGCCCACTACCAGGCTCCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: LPTLPDPPRLWD*GLVAHYQAPRG
Trigger: GCCCCTCGGAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCCAGAGGCGTGGTGGGTCGGGCAGAGTCGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000529866.5
CDS CCA 72 bp TGCCCGACCCACCACGCCTCTGGGACTGGGGGCTTGTaGCCCACTACCAGGCTCCGAGGGGCAGTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: CPTHHASGTGGL*PTTRLRGAVVW
Trigger: CCAAACCACTGCCCCTCGGAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCCAGAGGCGTGGTGGGTCGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000529866.5
CDS CCA 72 bp GGGGCTTGTGGCCCACTACCAGGCTCCGAGGGGCAGTaGTTTGGTGCAGCCGCGGATCCGTCTACTGCGGCT +
Preference number: 6 (lower is better)
Translates to: GACGPLPGSEGQ*FGAAADPSTAA
Trigger: AGCCGCAGTAGACGGATCCGCGGCTGCACCAAACCACTGCCCCTCGGAGCCTGGTAGTGGGCCACAAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000529210.1
ENST00000529866.5
ENST00000533533.5
CDS CCA 72 bp CCAGTTCTTCCGACTCTGCCCGACCCACCACGCCTCTaGGACTGGGGGCTTGTGGCCCACTACCAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: PVLPTLPDPPRL*DWGLVAHYQAP
Trigger: CGGAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCCAGAGGCGTGGTGGGTCGGGCAGAGTCGGAAGAACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000529866.5
CDS CAA 90 bp TTCTTCCGACTCTGCCCGACCCACCACGCCTCTGGGACTGGGGGCTaGTGGCCCACTACCAGGCTCCGAGGGGCAGTGGTTTGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: FFRLCPTHHASGTGG*WPTTRLRGAVVWCS
Trigger: GCTGCACCAAACCACTGCCCCTCGGAGCCTGGTAGTGGGCCACAAGCCCCCAGTCCCAGAGGCGTGGTGGGTCGGGCAGAGTCGGAAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000529866.5
CDS GCA 72 bp GGGGCAGTGGTTTGGTGCAGCCGCGGATCCGTCTACTaGGGCTCCGTCTACTCCGGCTATGAACCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: GAVVWCSRGSVY*GSVYSGYEPQQ
Trigger: CTGCTGCGGTTCATAGCCGGAGTAGACGGAGCCGCAGTAGACGGATCCGCGGCTGCACCAAACCACTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000529210.1
ENST00000529866.5
CDS GCA 72 bp CGCATCTTCCAGCTAGAAAGCCAGTTCTTCCGACTCTaGCCGACCCACCACGCCTCTGGGACTGGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: RIFQLESQFFRL*PTHHASGTGGL
Trigger: CAAGCCCCCAGTCCCAGAGGCGTGGTGGGTCGGGCAGAGTCGGAAGAACTGGCTTTCTAGCTGGAAGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000529866.5
CDS GCA 72 bp AGTAGAAGCCAGGGCCACAAACATGCAGTTAGGTACTaGTTCCCAGTGCTCTTGACCCCCGCCCCCAACACC +
Preference number: 6 (lower is better)
Translates to: SRSQGHKHAVRY*FPVLLTPAPNT
Trigger: GGTGTTGGGGGCGGGGGTCAAGAGCACTGGGAAGCAGTACCTAACTGCATGTTTGTGGCCCTGGCTTCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532088.1
CDS TCA 72 bp TCTCCAAGGGACCTGCGGATCTCAGTCATCACACTCTaGATGTCTTCCTTGGTACTACAGTATTCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SPRDLRISVITL*MSSLVLQYSPR
Trigger: CCTGGGAGAATACTGTAGTACCAAGGAAGACATTCAGAGTGTGATGACTGAGATCCGCAGGTCCCTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS GCA 72 bp TTAAGGATGCCAGAAAATGGCGACTCAGAGAGGACATaGTTTCTTTGTGCAGCGCTTGCGCGCTGCAAGTAT +
Preference number: 6 (lower is better)
Translates to: LRMPENGDSERT*FLCAALARCKY
Trigger: ATACTTGCAGCGCGCAAGCGCTGCACAAAGAAAGCATGTCCTCTCTGAGTCGCCATTTTCTGGCATCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534771.1
CDS CAA 72 bp GGGGATCTGCTGCCTCTTTCCTCTGTGTGTTACCCATaGCTGCCAGTAAACTCAGCTGAAACTGATCTTCCT +
Preference number: 6 (lower is better)
Translates to: GDLLPLSSVCYP*LPVNSAETDLP
Trigger: AGGAAGATCAGTTTCAGCTGAGTTTACTGGCAGCAATGGGTAACACACAGAGGAAAGAGGCAGCAGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS CAA 72 bp GCCAGAAAATGGCGACTCAGAGAGGACATGCTTTCTTaGTGCAGCGCTTGCGCGCTGCAAGTATATCCTATT +
Preference number: 6 (lower is better)
Translates to: ARKWRLREDMLS*CSACALQVYPI
Trigger: AATAGGATATACTTGCAGCGCGCAAGCGCTGCACAAAGAAAGCATGTCCTCTCTGAGTCGCCATTTTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534771.1
CDS TCA 72 bp GTCACTTTGTTTTCCCATTCAAATTCGGCCCACATCTaGCGGAATTCTGCATCAGTGCAAGTTGCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: VTLFSHSNSAHI*RNSASVQVAGW
Trigger: CCAGCCTGCAACTTGCACTGATGCAGAATTCCGTCAGATGTGGGCCGAATTTGAATGGGAAAACAAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526527.1
CDS GCA 72 bp GGCCCACATCTGACGGAATTCTGCATCAGTGCAAGTTaGAGGCTGGATATAGTCCATGATGTCGATGTGAAT +
Preference number: 6 (lower is better)
Translates to: GPHLTEFCISAS*RLDIVHDVDVN
Trigger: ATTCACATCGACATCATGGACTATATCCAGCCTGCAACTTGCACTGATGCAGAATTCCGTCAGATGTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526527.1
CDS GCA 72 bp CGACTCAGAGAGGACATGCTTTCTTTGTGCAGCGCTTaGGCGCTGCAAGTATATCCTATTTTCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: RLREDMLSLCSA*ALQVYPIFFLF
Trigger: GAAGAGGAAGAAAATAGGATATACTTGCAGCGCGCAAGCGCTGCACAAAGAAAGCATGTCCTCTCTGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534771.1
CDS GCA 72 bp ACATCCTCCAGATATGCAGCATCACACTTCAGTTTCTaGCTCCAAGCCTCTTCCAAGTTCTCTGATGATGCC +
Preference number: 6 (lower is better)
Translates to: TSSRYAASHFSF*LQASSKFSDDA
Trigger: GGCATCATCAGAGAACTTGGAAGAGGCTTGGAGGCAGAAACTGAAGTGTGATGCTGCATATCTGGAGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532088.1
CDS CCA 72 bp TCTCCTGAACCAAAGCTACATAGCGCAATGCAATCTTaGTCAGAGTTGTGGCAAGGGAGGCAGCAACAAAGA +
Preference number: 6 (lower is better)
Translates to: SPEPKLHSAMQS*SELWQGRQQQR
Trigger: TCTTTGTTGCTGCCTCCCTTGCCACAACTCTGACCAAGATTGCATTGCGCTATGTAGCTTTGGTTCAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526191.1
CDS CAA 90 bp TCTCCTGAACCAAAGCTACATAGCGCAATGCAATCTTGGTCAGAGTaGTGGCAAGGGAGGCAGCAACAAAGAAATCTCCATCCAGAAGGA +
Preference number: 6 (lower is better)
Translates to: SPEPKLHSAMQSWSE*WQGRQQQRNLHPEG
Trigger: TCCTTCTGGATGGAGATTTCTTTGTTGCTGCCTCCCTTGCCACAACTCTGACCAAGATTGCATTGCGCTATGTAGCTTTGGTTCAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526191.1
CDS CAA 90 bp GTTCTCAGCCGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATCCCCACCCGGTCCCT +
Preference number: 6 (lower is better)
Translates to: VLSRRHGFWLYYNQS*TQDLRMPENPHPVP
Trigger: AGGGACCGGGTGGGGATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCGGCTGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529866.5
ENST00000533096.5
CDS CAA 90 bp TTTAAGGATGCCAGAAAATGGCGACTCAGAGAGGACATGCTTTCTTaGTGCAGCGCTTGCGCGCTGCAAGTATATCCTATTTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: FKDARKWRLREDMLS*CSACALQVYPIFFL
Trigger: GAGGAAGAAAATAGGATATACTTGCAGCGCGCAAGCGCTGCACAAAGAAAGCATGTCCTCTCTGAGTCGCCATTTTCTGGCATCCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534771.1
CDS CAA 90 bp GTTCTCAGCCGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATCAGGCTCCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: VLSRRHGFWLYYNQS*TQDLRMPENQAPRG
Trigger: GCCCCTCGGAGCCTGATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCGGCTGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534234.5
CDS GCA 72 bp TTCCCATTCAAATTCGGCCCACATCTGACGGAATTCTaGATCAGTGCAAGTTGCAGGCTGGATATAGTCCAT +
Preference number: 6 (lower is better)
Translates to: FPFKFGPHLTEF*ISASCRLDIVH
Trigger: ATGGACTATATCCAGCCTGCAACTTGCACTGATGCAGAATTCCGTCAGATGTGGGCCGAATTTGAATGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526527.1
CDS GCA 72 bp AGAAAATGGCGACTCAGAGAGGACATGCTTTCTTTGTaGAGCGCTTGCGCGCTGCAAGTATATCCTATTTTC +
Preference number: 6 (lower is better)
Translates to: RKWRLREDMLSL*SACALQVYPIF
Trigger: GAAAATAGGATATACTTGCAGCGCGCAAGCGCTGCACAAAGAAAGCATGTCCTCTCTGAGTCGCCATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534771.1
CDS CCA 72 bp AAGCTACATAGCGCAATGCAATCTTGGTCAGAGTTGTaGCAAGGGAGGCAGCAACAAAGAAATCTCCATCCA +
Preference number: 6 (lower is better)
Translates to: KLHSAMQSWSEL*QGRQQQRNLHP
Trigger: TGGATGGAGATTTCTTTGTTGCTGCCTCCCTTGCCACAACTCTGACCAAGATTGCATTGCGCTATGTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526191.1
CDS CCA 72 bp TGCACGAATTCTTATATGGCCGGTAACAGCAGCATCTaGTCCCTGGTGAATTGGCTTCTCAATGCTGACATT +
Preference number: 6 (lower is better)
Translates to: CTNSYMAGNSSI*SLVNWLLNADI
Trigger: AATGTCAGCATTGAGAAGCCAATTCACCAGGGACCAGATGCTGCTGTTACCGGCCATATAAGAATTCGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000525214.1
CDS CAA 72 bp CCAAAGCTACATAGCGCAATGCAATCTTGGTCAGAGTaGTGGCAAGGGAGGCAGCAACAAAGAAATCTCCAT +
Preference number: 6 (lower is better)
Translates to: PKLHSAMQSWSE*WQGRQQQRNLH
Trigger: ATGGAGATTTCTTTGTTGCTGCCTCCCTTGCCACAACTCTGACCAAGATTGCATTGCGCTATGTAGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526191.1
CDS CAA 90 bp GTTCTCAGCCGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATCCGGTCCCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: VLSRRHGFWLYYNQS*TQDLRMPENPVPSA
Trigger: GGCAGAAGGGACCGGATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCGGCTGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249923.7
CDS TCA 72 bp CAGCATCTGGTCCCTGGTGAATTGGCTTCTCAATGCTaGCATTTGCAAGTGCATCTTCACCAAATATGGAAC +
Preference number: 6 (lower is better)
Translates to: QHLVPGELASQC*HLQVHLHQIWN
Trigger: GTTCCATATTTGGTGAAGATGCACTTGCAAATGTCAGCATTGAGAAGCCAATTCACCAGGGACCAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000525214.1
CDS GCA 72 bp CTTGGTGGGTCTAGAACTGCTAAGGGCACTCTGAGTTaGATAGGTACCCATTTCAGTAACCAATTTCTGAAC +
Preference number: 6 (lower is better)
Translates to: LGGSRTAKGTLS*IGTHFSNQFLN
Trigger: GTTCAGAAATTGGTTACTGAAATGGGTACCTATGCAACTCAGAGTGCCCTTAGCAGTTCTAGACCCACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000526191.1
CDS CAA 72 bp ATGGAGGACCAACTGCATACCATTGTAAATGGGTGTTaGGTTAGAACGGTCAGAAGCTACAAAGCAGGCATG +
Preference number: 6 (lower is better)
Translates to: MEDQLHTIVNGC*VRTVRSYKAGM
Trigger: CATGCCTGCTTTGTAGCTTCTGACCGTTCTAACCAAACACCCATTTACAATGGTATGCAGTTGGTCCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526191.1
CDS CAA 90 bp GTTCTCAGCCGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATCACGCCTCTGGGACT +
Preference number: 6 (lower is better)
Translates to: VLSRRHGFWLYYNQS*TQDLRMPENHASGT
Trigger: AGTCCCAGAGGCGTGATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCGGCTGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439561.7
ENST00000529210.1
ENST00000533533.5
CDS CAA 90 bp GCTGTGAATATGGAGGACCAACTGCATACCATTGTAAATGGGTGTTaGGTTAGAACGGTCAGAAGCTACAAAGCAGGCATGAACTACAGA +
Preference number: 6 (lower is better)
Translates to: AVNMEDQLHTIVNGC*VRTVRSYKAGMNYR
Trigger: TCTGTAGTTCATGCCTGCTTTGTAGCTTCTGACCGTTCTAACCAAACACCCATTTACAATGGTATGCAGTTGGTCCTCCATATTCACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526191.1
CDS CAA 90 bp GTTCTCAGCCGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATGGCGACTCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: VLSRRHGFWLYYNQS*TQDLRMPENGDSER
Trigger: CCTCTCTGAGTCGCCATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCGGCTGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534771.1
CDS GCA 72 bp ATCTTCACCAAATATGGAACGAGCATAAAGGTTGGCTaGCATAAAGCCACAGTAACCAGAAAGGGCCTTTTC +
Preference number: 6 (lower is better)
Translates to: IFTKYGTSIKVG*HKATVTRKGLF
Trigger: GAAAAGGCCCTTTCTGGTTACTGTGGCTTTATGGCAGCCAACCTTTATGCTCGTTCCATATTTGGTGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000525214.1
CDS GCA 72 bp GGAGCACCACCATTCTTGCTTAGTCTCTTTGCAATTTaGTGTCAACAACTTACTGTCAGTGTGCAAACGTAC +
Preference number: 6 (lower is better)
Translates to: GAPPFLLSLFAI*CQQLTVSVQTY
Trigger: GTACGTTTGCACACTGACAGTAAGTTGTTGACAGCAAATTGCAAAGAGACTAAGCAAGAATGGTGGTGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532088.1
CDS TCA 72 bp GCTACTTTGACGTTAGCTTTAATATTTGCGAAGTCATaGGGAGCAAGAGTCAAAGGAGACGGCTTTTCCACA +
Preference number: 6 (lower is better)
Translates to: ATLTLALIFAKS*GARVKGDGFST
Trigger: TGTGGAAAAGCCGTCTCCTTTGACTCTTGCTCCTCATGACTTCGCAAATATTAAAGCTAACGTCAAAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS TCA 72 bp ATTTCCTTCACTGGTCCTGAACTAATCCCAGCAAACTaGGGTGACTTCATAAATCCTTTCTCTTCCACTGGA +
Preference number: 6 (lower is better)
Translates to: ISFTGPELIPAN*GDFINPFSSTG
Trigger: TCCAGTGGAAGAGAAAGGATTTATGAAGTCACCTCAGTTTGCTGGGATTAGTTCAGGACCAGTGAAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526191.1
CDS TCA 72 bp ACAAATCCCACTTGCATTCTTTTGTCACTGCATGACTaGCTTCTCAGAGATTCTGCCATTGCTGGTTACTTC +
Preference number: 6 (lower is better)
Translates to: TNPTCILLSLHD*LLRDSAIAGYF
Trigger: GAAGTAACCAGCAATGGCAGAATCTCTGAGAAGTCAGTCATGCAGTGACAAAAGAATGCAAGTGGGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525214.1
CDS GCA 72 bp TTTGCAGCCATATCTGGAAATCGGACAGAACAGGAATaGAATGTTCGCACTAGGAGTTGTCTGTATTTGTCA +
Preference number: 6 (lower is better)
Translates to: FAAISGNRTEQE*NVRTRSCLYLS
Trigger: TGACAAATACAGACAACTCCTAGTGCGAACATTGCATTCCTGTTCTGTCCGATTTCCAGATATGGCTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS GCA 72 bp TCTTTGCAATTTGCTGTCAACAACTTACTGTCAGTGTaGAAACGTACAGTTCACATCCTCCAGATATGCAGC +
Preference number: 6 (lower is better)
Translates to: SLQFAVNNLLSV*KRTVHILQICS
Trigger: GCTGCATATCTGGAGGATGTGAACTGTACGTTTGCACACTGACAGTAAGTTGTTGACAGCAAATTGCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532088.1
CDS CAA 72 bp CGAACAAACTCCAAGACATCAGCAGCTGCTGCTTCGTaGTTGTCACTGAGAAATTCCATTAACACAGGAATA +
Preference number: 6 (lower is better)
Translates to: RTNSKTSAAAAS*LSLRNSINTGI
Trigger: TATTCCTGTGTTAATGGAATTTCTCAGTGACAACAACGAAGCAGCAGCTGCTGATGTCTTGGAGTTTGTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS CAA 90 bp ATGGCTTCACGAACAAACTCCAAGACATCAGCAGCTGCTGCTTCGTaGTTGTCACTGAGAAATTCCATTAACACAGGAATAACATTTGCA +
Preference number: 6 (lower is better)
Translates to: MASRTNSKTSAAAAS*LSLRNSINTGITFA
Trigger: TGCAAATGTTATTCCTGTGTTAATGGAATTTCTCAGTGACAACAACGAAGCAGCAGCTGCTGATGTCTTGGAGTTTGTTCGTGAAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS TCA 72 bp AGGATATCCATAACCAGATCCTGTAGTACTCGTTCATaGGCAGGATGCTCTTTTAATTCTATCAAGCGATCC +
Preference number: 6 (lower is better)
Translates to: RISITRSCSTRS*AGCSFNSIKRS
Trigger: GGATCGCTTGATAGAATTAAAAGAGCATCCTGCTCATGAACGAGTACTACAGGATCTGGTTATGGATATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS TCA 72 bp TTCTCAACAATAAGCATTCTCAGGTTATCAAAGCGCTaGATGGCTTCACGAACAAACTCCAAGACATCAGCA +
Preference number: 6 (lower is better)
Translates to: FSTISILRLSKR*MASRTNSKTSA
Trigger: TGCTGATGTCTTGGAGTTTGTTCGTGAAGCCATTCAGCGCTTTGATAACCTGAGAATGCTTATTGTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS GCA 72 bp CTGGTGAATTGGCTTCTCAATGCTGACATTTGCAAGTaGATCTTCACCAAATATGGAACGAGCATAAAGGTT +
Preference number: 6 (lower is better)
Translates to: LVNWLLNADICK*IFTKYGTSIKV
Trigger: AACCTTTATGCTCGTTCCATATTTGGTGAAGATGCACTTGCAAATGTCAGCATTGAGAAGCCAATTCACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000525214.1
CDS CAA 72 bp CGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATCCGGTC +
Preference number: 6 (lower is better)
Translates to: RRHGFWLYYNQS*TQDLRMPENPV
Trigger: GACCGGATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249923.7
CDS CAA 72 bp ACAAACTCCAAGACATCAGCAGCTGCTGCTTCGTTGTaGTCACTGAGAAATTCCATTAACACAGGAATAACA +
Preference number: 6 (lower is better)
Translates to: TNSKTSAAAASL*SLRNSINTGIT
Trigger: TGTTATTCCTGTGTTAATGGAATTTCTCAGTGACAACAACGAAGCAGCAGCTGCTGATGTCTTGGAGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS CAA 72 bp CGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATCACGCC +
Preference number: 6 (lower is better)
Translates to: RRHGFWLYYNQS*TQDLRMPENHA
Trigger: GGCGTGATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439561.7
ENST00000529210.1
ENST00000533533.5
CDS CAA 72 bp CGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATCCCCAC +
Preference number: 6 (lower is better)
Translates to: RRHGFWLYYNQS*TQDLRMPENPH
Trigger: GTGGGGATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529866.5
ENST00000533096.5
CDS CAA 72 bp CGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATGGCGAC +
Preference number: 6 (lower is better)
Translates to: RRHGFWLYYNQS*TQDLRMPENGD
Trigger: GTCGCCATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534771.1
CDS CAA 72 bp CGCCGTCATGGTTTCTGGTTATATTATAACCAATCCTaGACACAAGATTTAAGGATGCCAGAAAATCAGGCT +
Preference number: 6 (lower is better)
Translates to: RRHGFWLYYNQS*TQDLRMPENQA
Trigger: AGCCTGATTTTCTGGCATCCTTAAATCTTGTGTCAAGGATTGGTTATAATATAACCAGAAACCATGACGGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534234.5
CDS CAA 90 bp CGGACAGAACAGGAATGCAATGTTCGCACTAGGAGTTGTCTGTATTaGTCAGTATCTTCATGCTCAGACACATTATTTGTTTTTATCACT +
Preference number: 6 (lower is better)
Translates to: RTEQECNVRTRSCLY*SVSSCSDTLFVFIT
Trigger: AGTGATAAAAACAAATAATGTGTCTGAGCATGAAGATACTGACAAATACAGACAACTCCTAGTGCGAACATTGCATTCCTGTTCTGTCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS TCA 72 bp TCACAACAAGTACATCCAGGACAATATCATATTGGTTaGCATGAACGTAAGCTTCTGCATATACAGGATCTG +
Preference number: 6 (lower is better)
Translates to: SQQVHPGQYHIG*HERKLLHIQDL
Trigger: CAGATCCTGTATATGCAGAAGCTTACGTTCATGTCAACCAATATGATATTGTCCTGGATGTACTTGTTGTGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS GCA 72 bp GCTGCAGAATGTCTCCAAATGTTTGAACTTGATCAATaGAAGTACTTAAGTAATCCAAAGCTCGATCCTGAT +
Preference number: 6 (lower is better)
Translates to: AAECLQMFELDQ*KYLSNPKLDPD
Trigger: ATCAGGATCGAGCTTTGGATTACTTAAGTACTTGCATTGATCAAGTTCAAACATTTGGAGACATTCTGCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS CAA 72 bp TTGGTTCACAACAAGTACATCCAGGACAATATCATATaGGTTGACATGAACGTAAGCTTCTGCATATACAGG +
Preference number: 6 (lower is better)
Translates to: LVHNKYIQDNII*VDMNVSFCIYR
Trigger: CCTGTATATGCAGAAGCTTACGTTCATGTCAACCAATATGATATTGTCCTGGATGTACTTGTTGTGAACCAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7
CDS CAA 90 bp AGTAACCAGAAAGGGCCTTTTCTGGAGTCAGGCATTTCATATTGGTaGACTTTAATATGTGCTGTAAGTAGTCATTTAAATCAACCATGT +
Preference number: 6 (lower is better)
Translates to: SNQKGPFLESGISYW*TLICAVSSHLNQPC
Trigger: ACATGGTTGATTTAAATGACTACTTACAGCACATATTAAAGTCAACCAATATGAAATGCCTGACTCCAGAAAAGGCCCTTTCTGGTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000525214.1
CDS CAA 90 bp CGAATAGCTGGCATTAAAGGTTCTAGCAATTCTGCTTCTTTCAATTaGCAAAGAAAACGAAGAGTAGATCCTCGAATAAATTCATTAGGA +
Preference number: 6 (lower is better)
Translates to: RIAGIKGSSNSASFN*QRKRRVDPRINSLG
Trigger: TCCTAATGAATTTATTCGAGGATCTACTCTTCGTTTTCTTTGCAAATTGAAAGAAGCAGAATTGCTAGAACCTTTAATGCCAGCTATTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249923.7
ENST00000439561.7
ENST00000534234.5
CDS CCA 72 bp AGTTCTAATGTGCAATTCTGCAAAGTATCACTGGTTTaGTTCACAACAAGTACATCCAGGACAATATCATAT +
Preference number: 6 (lower is better)
Translates to: SSNVQFCKVSLV*FTTSTSRTISY
Trigger: ATATGATATTGTCCTGGATGTACTTGTTGTGAACCAAACCAGTGATACTTTGCAGAATTGCACATTAGAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249923.7
ENST00000439561.7