RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COPA (Homo sapiens)

Ensembl gene IDs: ENSG00000122218

Ensembl transcript IDs: ENST00000241704.8, ENST00000368069.7, ENST00000481040.1, ENST00000481522.1, ENST00000541366.1, ENST00000545266.1, ENST00000647683.1, ENST00000647693.1, ENST00000647799.1, ENST00000647899.1, ENST00000648280.1, ENST00000648501.1, ENST00000648805.1, ENST00000649231.1, ENST00000649676.1, ENST00000649787.1, ENST00000649963.1, ENST00000650154.1

Found 2189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATAGCCATACATGGAGGGTAGGCAGGGCAGAGCCTGATAGGTTGTaGGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCTTGTAGGGGC +
Preference number: 1 (lower is better)
Translates to: DSHTWRVGRAEPDRL*GLGRMSVGTVACRG
Trigger: GCCCCTACAAGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGGCTCTGCCCTGCCTACCCTCCATGTATGGCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp GAGGGCTGTACGCAGCACCAGGATCATGTGCACAGGCTGCAGGTTTaGGTGGGTGAAATAGGCTGCCATCTCACAGATGCGCTTCTGCTG +
Preference number: 1 (lower is better)
Translates to: EGCTQHQDHVHRLQV*VGEIGCHLTDALLL
Trigger: CAGCAGAAGCGCATCTGTGAGATGGCAGCCTATTTCACCCACTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCTGCGTACAGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp CAGACCAGAAATATCCCAAACGCGCACAGTCTGGTCCAGGCTGGCTaGTACTACCAAGTCTTCTGTGGGGTGGAACTGAGCACACATCAC +
Preference number: 1 (lower is better)
Translates to: QTRNIPNAHSLVQAG*YYQVFCGVELSTHH
Trigger: GTGATGTGTGCTCAGTTCCACCCCACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTGGGATATTTCTGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR CCA 90 bp CAGCTGCAACCGTTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTaGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTAGG +
Preference number: 1 (lower is better)
Translates to: QLQPLDEVIKLQAHS*YTILQPCILPVAIR
Trigger: CCTAATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAACGGTTGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 90 bp CGCGCACAGTCTGGTCCAGGCTGGCTGATACTACCAAGTCTTCTGTaGGGTGGAACTGAGCACACATCACATAATGGTTGTGCCCTGTTA +
Preference number: 1 (lower is better)
Translates to: RAQSGPGWLILPSLL*GGTEHTSHNGCALL
Trigger: TAACAGGGCACAACCATTATGTGATGTGTGCTCAGTTCCACCCCACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAGACTGTGCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR CCA 90 bp TCCTCAGACCAGAAATATCCCAAACGCGCACAGTCTGGTCCAGGCTaGCTGATACTACCAAGTCTTCTGTGGGGTGGAACTGAGCACACA +
Preference number: 1 (lower is better)
Translates to: SSDQKYPKRAQSGPG*LILPSLLWGGTEHT
Trigger: TGTGTGCTCAGTTCCACCCCACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTGGGATATTTCTGGTCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR GCA 90 bp CAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTTGTCATCCAGTaGTTTGGCTGCTTCCAGAGCAATCTCAATGTTTCCACACTCCAG +
Preference number: 1 (lower is better)
Translates to: QGHFSQLFPAVLVIQ*FGCFQSNLNVSTLQ
Trigger: CTGGAGTGTGGAAACATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp ATCATACCACCATCATGGCCTGCTGCAAAGAGGTTAAGGTTAGGGTaGGCAGCTAGGACCCAGAAACGATCATGGTCTCTGCGGAAAGTC +
Preference number: 1 (lower is better)
Translates to: IIPPSWPAAKRLRLG*AARTQKRSWSLRKV
Trigger: GACTTTCCGCAGAGACCATGATCGTTTCTGGGTCCTAGCTGCTCACCCTAACCTTAACCTCTTTGCAGCAGGCCATGATGGTGGTATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 90 bp AGGCTGCCATCTCACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTaGGCAGCTTCTTCCTTTCTGTCTCCACGGACAAACCCACAATGT +
Preference number: 1 (lower is better)
Translates to: RLPSHRCASAVLESL*AASSFLSPRTNPQC
Trigger: ACATTGTGGGTTTGTCCGTGGAGACAGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTGAGATGGCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp CTGACCCATGCACACAAAGGGGGCCTTAGCGAAACTGCAGAGGACTaGTCCTTAAACCAATCACATCTTTGCCAATCTCTGTCACTGTGG +
Preference number: 1 (lower is better)
Translates to: LTHAHKGGLSETAED*SLNQSHLCQSLSLW
Trigger: CCACAGTGACAGAGATTGGCAAAGATGTGATTGGTTTAAGGATCAGTCCTCTGCAGTTTCGCTAAGGCCCCCTTTGTGTGCATGGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR GCA 90 bp CCCTACTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTaGCAGGATGTGATCAACTGGAAGCTGAGAGTTATTACACCAGAT +
Preference number: 1 (lower is better)
Translates to: PYLVMKEPHGCFERA*QDVINWKLRVITPD
Trigger: ATCTGGTGTAATAACTCTCAGCTTCCAGTTGATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAGTAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 90 bp GAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATCAACTaGAAGCTGAGAGTTATTACACCAGATCTGAGTTGGACTTGTTCC +
Preference number: 1 (lower is better)
Translates to: EPHGCFERACQDVIN*KLRVITPDLSWTCS
Trigger: GGAACAAGTCCAACTCAGATCTGGTGTAATAACTCTCAGCTTCCAGTTGATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 90 bp AATAAAGGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTaGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATTGTCTCCTTC +
Preference number: 1 (lower is better)
Translates to: NKGQLVSNGMIGAGG*SSLALGSMSGIVSF
Trigger: GAAGGAGACAATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCCTTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp GATATGATGCAGCACAAATGTCAAAGGGGTTGTGCATGTCATAATTaGGCTGGTAGGCATCTGTGGGATTCTTCTCACAGGCAGACAGGA +
Preference number: 1 (lower is better)
Translates to: DMMQHKCQRGCACHN*AGRHLWDSSHRQTG
Trigger: TCCTGTCTGCCTGTGAGAAGAATCCCACAGATGCCTACCAGCTCAATTATGACATGCACAACCCCTTTGACATTTGTGCTGCATCATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp GAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATaGTGCAGCACAAATGTCAAAGGGGTTGTGCATGTCATAATTGAG +
Preference number: 1 (lower is better)
Translates to: EWTLFYWLSTVDGPI*CSTNVKGVVHVIIE
Trigger: CTCAATTATGACATGCACAACCCCTTTGACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp CCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTaGGAAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGC +
Preference number: 1 (lower is better)
Translates to: PLQSLVYCPQQEVAH*EGWNGIFPQPPQIC
Trigger: GCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp GCTAGCTCTTGTACAAAGCAGGACTGCATTTTCTGCTGGATTGTATaGCATATTGAATACTGGAAACTTGGAACCACTCCGCAACTGCAT +
Preference number: 1 (lower is better)
Translates to: ASSCTKQDCIFCWIV*HIEYWKLGTTPQLH
Trigger: ATGCAGTTGCGGAGTGGTTCCAAGTTTCCAGTATTCAATATGTCATACAATCCAGCAGAAAATGCAGTCCTGCTTTGTACAAGAGCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp TTGTACAAAGCAGGACTGCATTTTCTGCTGGATTGTATGACATATTaGATACTGGAAACTTGGAACCACTCCGCAACTGCATCACAGCTA +
Preference number: 1 (lower is better)
Translates to: LYKAGLHFLLDCMTY*ILETWNHSATASQL
Trigger: TAGCTGTGATGCAGTTGCGGAGTGGTTCCAAGTTTCCAGTATTCAATATGTCATACAATCCAGCAGAAAATGCAGTCCTGCTTTGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 90 bp GTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATAAATACTaGAGGGATTTACTAAACAAATGTCCATCACAGAGTTTTCCTTTT +
Preference number: 1 (lower is better)
Translates to: VDRKESCCGERRDKY*RDLLNKCPSQSFPF
Trigger: AAAAGGAAAACTCTGTGATGGACATTTGTTTAGTAAATCCCTTCAGTATTTATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTCAGTGGGATCAATGGTaGGTACCCGGGGACGACACT +
Preference number: 2 (lower is better)
Translates to: PQAWARVLVGAEQRWQLSQWDQW*VPGDDT
Trigger: AGTGTCGTCCCCGGGTACTCACCATTGATCCCACTG...AGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCATCTGGTGGTTCCCCTaGAGCAGGGCCACTTCTCCC +
Preference number: 2 (lower is better)
Translates to: ASGPQLVHHSSALHPSSCIWWFP*SRATSP
Trigger: GGGAGAAGTGGCCCTGCTGCAGGGGAACCACCAGAT...GCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCCCCACCAGCTACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 2 (lower is better)
Translates to: GLVPLVGGTKKPSSAPPATPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...AGCTGGTGGGGCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGTGCCCTTCACCCGTGTaGCATAGATGGGTAAATCCA +
Preference number: 2 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKCPSPV*HRWVNP
Trigger: TGGATTTACCCATCTATGTCACACGGGTGAAGGGCA...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: ASGPQLVHHSSALHPSSCGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...GCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 2 (lower is better)
Translates to: SVGFFSQADRIFRVCWATTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...GGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTGTCCTCAGAATTGCTaGGGATCAACTCTTGGCGAG +
Preference number: 2 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFCPQNC*GSTLGE
Trigger: CTCGCCAAGAGTTGATCCTCAGCAATTCTGAGGACA...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCCTCGAAGCAGGAGATTaGCTGTGCCAGCATAGAAGA +
Preference number: 2 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFLEAGD*LCQHRR
Trigger: TCTTCTATGCTGGCACAGGCAATCTCCTGCTTCGAG...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCGTTCTTGTCATCCAGTaGTTTGGCTGCTTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFVLVIQ*FGCFQS
Trigger: GCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAAC...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCAGGTCTCGAACTCCTaGCCTCAGATGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRQVSNS*PQMICP
Trigger: TGGGCAGATCATCTGAGGCCAGGAGTTCGAGACCTG...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GCCATGGGTAGCAGCTGTGAGATAGGCCAGGGACTTCTGTCCACAGTTCTTCAGTCTCTGCGGAAAGTCTaGACCCCAGTCCGCTTAGAC +
Preference number: 2 (lower is better)
Translates to: AMGSSCEIGQGLLSTVLQSLRKV*TPVRLD
Trigger: GTCTAAGCGGACTGGGGTTCAGACTTTCCGCAGAGA...CTGAAGAACTGTGGACAGAAGTCCCTGGCCTATCTCACAGCTGCTACCCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCCAGTGGGATCAATGGTaGGTACCCGGGGACGACACT +
Preference number: 2 (lower is better)
Translates to: ASVGFFSQADRIFRVCWAQWDQW*VPGDDT
Trigger: AGTGTCGTCCCCGGGTACTCACCATTGATCCCACTG...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp AAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTAACGGCTGTCAGGCCTaGGGATCGTTTCCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: KLQAHSWYTILQPCILPVNGCQA*GSFPFR
Trigger: CCTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTT...AACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TGTAGCCTCCACAAACCCATCTTCATCCAACTGCAGCTCTGCATCCTCTCCCCAAACGGCTGTCAGGCCTaGGGATCGTTTCCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: CSLHKPIFIQLQLCILSPNGCQA*GSFPFR
Trigger: CCTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTT...TGGGGAGAGGATGCAGAGCTGCAGTTGGATGAAGATGGGTTTGTGGAGGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGACACACTCGGATGGTCTaGTCATCGGAGGCACTCAGA +
Preference number: 2 (lower is better)
Translates to: FRPTAGTPFFSPASFQLRHTRMV*SSEALR
Trigger: TCTGAGTGCCTCCGATGATCAGACCATCCGAGTGTG...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR GCA 90 bp CCCCTACTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGAGCCAGAGTCCGCTTCTaGTGTACGTCAAAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: PLLGHEGAAWLFRKSLPGARVRF*CTSKSV
Trigger: CACACTCTTTGACGTACAGCAGAAGCGGACTCTGGC...TCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAGTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACATCTGGTGGTTCCCCTaGAGCAGGGCCACTTCTCCC +
Preference number: 2 (lower is better)
Translates to: VDTFLLAFHGRWADMMQHIWWFP*SRATSP
Trigger: GGGAGAAGTGGCCCTGCTGCAGGGGAACCACCAGAT...GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCGAGCTGCTGGGCCTCTaGAATCTCTTGTTTATTGTC +
Preference number: 2 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFELLGL*NLLFIV
Trigger: GACAATAAACAAGAGATTGCAGAGGCCCAGCAGCTC...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GAGCCTGATAGGTTGTGCGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCTTGTCAGGTCTCGAACTCCTaGCCTCAGATGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: EPDRLCGLGRMSVGTVACQVSNS*PQMICP
Trigger: TGGGCAGATCATCTGAGGCCAGGAGTTCGAGACCTG...ACAAGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATAAGGGGCATAGTGGGGTaGAAGGCAGCCCAGTTTACT +
Preference number: 2 (lower is better)
Translates to: GPTEWTLFYWLSTVDGPIRGIVG*KAAQFT
Trigger: AGTAAACTGGGCTGCCTTCCACCCCACTATGCCCCT...TATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATAGTTCGAATGATCCCGTaGTCCCCAGTGGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: GPTEWTLFYWLSTVDGPIVRMIP*SPVVTA
Trigger: TGCTGTCACCACTGGGGACCACGGGATCATTCGAAC...TATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGGTTCGAATGATCCCGTaGTCCCCAGTGGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: SFRPTAGTPFFSPASFQLVRMIP*SPVVTA
Trigger: TGCTGTCACCACTGGGGACCACGGGATCATTCGAAC...CAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCCCCACCAGCTATTTCCACAATCTGGTaGTTCCCCTGCAGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GLVPLVGGTKKPSSAPPAISTIW*FPCSRA
Trigger: GGCCCTGCTGCAGGGGAACCACCAGATTGTGGAAAT...AGCTGGTGGGGCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CCCCTACTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGACACATTTCCACAATCTaGTGGTTCCCCTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: PLLGHEGAAWLFRKSLPGHISTI*WFPCSR
Trigger: CCTGCTGCAGGGGAACCACCAGATTGTGGAAATGTG...TCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAGTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GATCAACCCCAGTTATTCCTCTCACATCCGATTCCACCGCACCAGGGGACAGGTCTGGTCCAGGCTGGCTaGTACTACCAAGTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: DQPQLFLSHPIPPHQGTGLVQAG*YYQVFC
Trigger: ACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAG...ACCTGTCCCCTGGTGCGGTGGAATCGGATGTGAGAGGAATAACTGGGGTTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR GCA 90 bp AGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGTTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SFRPTAGTPFFSPASFQLFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...CAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TGGTGGTTCCCCTGCAGCAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTTGAGAAATCTTCACAGATaGCAGAGTCCGCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: WWFPCSRATSPSFSQQFLRNLHR*QSPLLL
Trigger: CAGCAGAAGCGGACTCTGGCATCTGTGAAGATTTCT...CAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTGCTGCAGGGGAACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCATCCAACTGCAGCTCTaGATCCTCTCCCCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFIQLQL*ILSPAL
Trigger: GAGGGCTGGGGAGAGGATGCAGAGCTGCAGTTGGAT...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAATTCAGCCCCACCAGCTaGCCCAGGGGATATATCCAG +
Preference number: 2 (lower is better)
Translates to: FHSLLKFANCGELVAQLQFSPTS*PRGYIQ
Trigger: CTGGATATATCCCCTGGGGCAGCTGGTGGGGCTGAA...TTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCTGCCATCTCACAGATaGGCTTCTGCTGTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRLPSHR*ASAVLE
Trigger: CTCTAGAACAGCAGAAGCGCATCTGTGAGATGGCAG...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: LDEVIKLQAHSWYTILQPGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAAGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: FHSLLKFANCGELVAQLQGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...TTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCCTGAGGATCAACTCTTaGCGAGGGTGGAAGACGGCA +
Preference number: 2 (lower is better)
Translates to: ASVGFFSQADRIFRVCWALRINS*RGWKTA
Trigger: TGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAG...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGATGAACAGCATAGGCTaGCCGTTCCCGTTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: SFRPTAGTPFFSPASFQLMNSIG*PFPFQL
Trigger: AAGCTGGAACGGGAACGGCCAGCCTATGCTGTTCAT...CAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCATAGGTGCAGGTGGCTaGAGCAGCTTGGCATTAGGG +
Preference number: 2 (lower is better)
Translates to: QWHDRCRWLEQLGIRVNVIGAGG*SSLALG
Trigger: CCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTAT...GACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGATGGTGATGAGCTGCTaGGCCTCTGCAATCTCTTGT +
Preference number: 2 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRMVMSC*ASAISC
Trigger: ACAAGAGATTGCAGAGGCCCAGCAGCTCATCACCAT...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 90 bp GCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTTGAAGAACAGATaGAGGGCTGTACGCAGCACCAGGATCATGTGCACAGGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: AKVAAVLKFLSLKNR*RAVRSTRIMCTGCR
Trigger: CCTGCAGCCTGTGCACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 90 bp AGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTaGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGC +
Preference number: 2 (lower is better)
Translates to: SRRRAKVAAVLKFLS*KNRLRAVRSTRIMC
Trigger: GCACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGGGAACATATGGTGACTaGCCCATGCACACAAAGGGG +
Preference number: 2 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLGTYGD*PMHTKG
Trigger: CCCCTTTGTGTGCATGGGTCAGTCACCATATGTTCC...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTGCCACACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 2 (lower is better)
Translates to: LQCQTKASFLILDKMQCHTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...GTGGCACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp ACCAGATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 2 (lower is better)
Translates to: TRSELDLFPWLGAQRNHLTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...AAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGCATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 2 (lower is better)
Translates to: DGTEFFHSLLKFANCGELHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATCAACCGCCAGATCTTCACTTaGCGATCATCTGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: VMKEPHGCFERACQDVINRQIFT*RSSAPD
Trigger: ATCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCG...GTTGATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GGCCAGCTTGAATTTGAACTCAGTGGGATCAATGGTGAGTACCCGGGGACGACACGCCAGATCTTCACTTaGCGATCATCTGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: GQLEFELSGINGEYPGTTRQIFT*RSSAPD
Trigger: ATCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCG...TGTCGTCCCCGGGTACTCACCATTGATCCCACTGAGTTCAAATTCAAGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAATCCAGAGTTCGAATaGTCCCGTGGTCCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: PIGIQWHDRCRWLEQLGINPEFE*SRGPQW
Trigger: CCACTGGGGACCACGGGATCATTCGAACTCTGGATT...AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAAAATCCAGAGTTCGAATaGTCCCGTGGTCCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: FHSLLKFANCGELVAQLQNPEFE*SRGPQW
Trigger: CCACTGGGGACCACGGGATCATTCGAACTCTGGATT...TTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCAACGATCATGGTCTCTaGGGAAAGTCTGAACCCCAG +
Preference number: 2 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSNDHGL*GKSEPQ
Trigger: CTGGGGTTCAGACTTTCCGCAGAGACCATGATCGTT...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGGAACCACTCCGCAACTaGATCACAGCTACATCTTTG +
Preference number: 2 (lower is better)
Translates to: RIFRVCWATSGLGPSSSREPLRN*ITATSL
Trigger: CAAAGATGTAGCTGTGATGCAGTTGCGGAGTGGTTC...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGAGAAATCTTCACAGATaGCAGAGTCCGCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRRNLHR*QSPLLL
Trigger: CAGCAGAAGCGGACTCTGGCATCTGTGAAGATTTCT...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATCAATGGCATGATAGGTaGAGGTGGCTGGAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDQWHDR*RWLEQL
Trigger: AAGCTGCTCCAGCCACCTGCACCTATCATGCCATTG...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTTGAAGAACAGATTGAGCCTGATAGGTTGTaGGGCCTCGGGCGTATGTCT +
Preference number: 2 (lower is better)
Translates to: APSKGGSCLEVLELEEQIEPDRL*GLGRMS
Trigger: AGACATACGCCCGAGGCCGCACAACCTATCAGGCTC...AATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCCTTTCTGGAGCCTGATAGGTTGTaGGGCCTCGGGCGTATGTCT +
Preference number: 2 (lower is better)
Translates to: HRCASAVLESLWAASSFLEPDRL*GLGRMS
Trigger: AGACATACGCCCGAGGCCGCACAACCTATCAGGCTC...CAGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCAGGGGCATAGTGGGGTaGAAGGCAGCCCAGTTTACT +
Preference number: 2 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFRGIVG*KAAQFT
Trigger: AGTAAACTGGGCTGCCTTCCACCCCACTATGCCCCT...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGTTCGAATGATCCCGTaGTCCCCAGTGGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: WMRSLSFRPTAGTPFFSPVRMIP*SPVVTA
Trigger: TGCTGTCACCACTGGGGACCACGGGATCATTCGAAC...AGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATCACATTTCCACAATCTaGTGGTTCCCCTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDHISTI*WFPCSR
Trigger: CCTGCTGCAGGGGAACCACCAGATTGTGGAAATGTG...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGCACATTTCCACAATCTaGTGGTTCCCCTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQHISTI*WFPCSR
Trigger: CCTGCTGCAGGGGAACCACCAGATTGTGGAAATGTG...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAACCGTTGGATGAGGTCATTATAGGTGCAGGTGGCTaGAGCAGCTTGGCATTAGGG +
Preference number: 2 (lower is better)
Translates to: FANCGELVAQLQPLDEVIIGAGG*SSLALG
Trigger: CCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTAT...AATGACCTCATCCAACGGTTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGCATGATAGGTGCAGGTaGCTGGAGCAGCTTGGCATT +
Preference number: 2 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQHDRCR*LEQLGI
Trigger: AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTTCCACGGTAGATaGGCCGATATGATGCAGCAC +
Preference number: 2 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQAFHGR*ADMMQH
Trigger: GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGC...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCCTACCAAGTCTTCTGTaGGGTGGAACTGAGCACACA +
Preference number: 2 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSLPSLL*GGTEHT
Trigger: TGTGTGCTCAGTTCCACCCCACAGAAGACTTGGTAG...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CCA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCCAGTCTGGTCCAGGCTaGCTGATACTACCAAGTCTT +
Preference number: 2 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSQSGPG*LILPSL
Trigger: AAGACTTGGTAGTATCAGCCAGCCTGGACCAGACTG...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR CAA 90 bp TTCCCCTGCAGCAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTaGTCATCCAGTGCTTTGGCTGCTTCCAGAGCAATCTCAATGTTT +
Preference number: 2 (lower is better)
Translates to: FPCSRATSPSFSQQF*SSSALAASRAISMF
Trigger: AAACATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTGCTGCAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 90 bp AGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTaGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATC +
Preference number: 2 (lower is better)
Translates to: SSSRRRAKVAAVLKF*SLKNRLRAVRSTRI
Trigger: GATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TGCCACTTCAGGATAGCCCTTCTTCTGGAGATAAGCAATAATAGACTGGCCAACCATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 2 (lower is better)
Translates to: CHFRIALLLEISNNRLANHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...GTTGGCCAGTCTATTATTGCTTATCTCCAGAAGAAGGGCTATCCTGAAGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CACACTGAGAAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACCATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 2 (lower is better)
Translates to: HTEKDGTEFFHSLLKFANHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...GTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTTCTCAGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GTAGCCTCCACAAACCCATCTTCATCCAACTGCAGCTCTGCATCCTCTCCCCAGAACCTCCCATGCCTTTaGTTCATTCATGCGCCAGAT +
Preference number: 2 (lower is better)
Translates to: VASTNPSSSNCSSASSPQNLPCL*FIHAPD
Trigger: ATCTGGCGCATGAATGAATCAAAGGCATGGGAGGTT...CTGGGGAGAGGATGCAGAGCTGCAGTTGGATGAAGATGGGTTTGTGGAGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATCCCAGGCCCCACTCTTaGCACGAATGTTCTCATGAA +
Preference number: 2 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDPRPHS*HECSHE
Trigger: TTCATGAGAACATTCGTGTCAAGAGTGGGGCCTGGG...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTCTGTCCACAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCAGGTATCCCAGGCCCCACTCTTaGCACGAATGTTCTCATGAA +
Preference number: 2 (lower is better)
Translates to: FCPQFFRIRTRSDTSPRYPRPHS*HECSHE
Trigger: TTCATGAGAACATTCGTGTCAAGAGTGGGGCCTGGG...ATACCTGGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTGTGGACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GAGCAGCTTGGCATTAGGGTCAATGTCTGGGATTGTCTCCTTCTCTGGGTCAAAAATCCAGAGTTCGAATaGTCCCGTGGTCCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: EQLGIRVNVWDCLLLWVKNPEFE*SRGPQW
Trigger: CCACTGGGGACCACGGGATCATTCGAACTCTGGATT...TTTGACCCAGAGAAGGAGACAATCCCAGACATTGACCCTAATGCCAAGCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATTGCCCTTCACCCGTGTaGCATAGATGGGTAAATCCA +
Preference number: 2 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDCPSPV*HRWVNP
Trigger: TGGATTTACCCATCTATGTCACACGGGTGAAGGGCA...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TGGTGGTTCCCCTGCAGCAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTTGGAGTTTTCTCATCCTTaGCAAAATGCAGTGCCACTT +
Preference number: 2 (lower is better)
Translates to: WWFPCSRATSPSFSQQFLEFSHP*QNAVPL
Trigger: AAGTGGCACTGCATTTTGTCAAGGATGAGAAAACTC...CAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTGCTGCAGGGGAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCAATAGCAGGCCCCACTaGGTGGACACTTTTCTACTG +
Preference number: 2 (lower is better)
Translates to: ASVGFFSQADRIFRVCWANSRPH*VDTFLL
Trigger: CAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATT...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGTTAGAGACGGGGTGTTaGCATGTTGGCCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVLETGC*HVGQAG
Trigger: ACCTGCCTGGCCAACATGGCAACACCCCGTCTCTAA...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCCTTTCTGTTAGAGACGGGGTGTTaGCATGTTGGCCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: HRCASAVLESLWAASSFLLETGC*HVGQAG
Trigger: ACCTGCCTGGCCAACATGGCAACACCCCGTCTCTAA...CAGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TTTTGGTACGCTGATAGCACATTTCCACAATCTGGTGGTTCCCCTGCAGCAGGGTTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: FWYADSTFPQSGGSPAAGFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...CCCTGCTGCAGGGGAACCACCAGATTGTGGAAATGTGCTATCAGCGTACCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AGGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCACCATCATGGCCTGCTaGAAAGAGGTTAAGGTTAGG +
Preference number: 2 (lower is better)
Translates to: RPIGIQWHDRCRWLEQLGTIMAC*KEVKVR
Trigger: CCTAACCTTAACCTCTTTGCAGCAGGCCATGATGGT...GCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCAACCATCATGGCCTGCTaGAAAGAGGTTAAGGTTAGG +
Preference number: 2 (lower is better)
Translates to: GQLVSNGMIGAGGWSSLATIMAC*KEVKVR
Trigger: CCTAACCTTAACCTCTTTGCAGCAGGCCATGATGGT...TGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCAGAACCACTCCGCAACTaGATCACAGCTACATCTTTG +
Preference number: 2 (lower is better)
Translates to: GQLVSNGMIGAGGWSSLAEPLRN*ITATSL
Trigger: CAAAGATGTAGCTGTGATGCAGTTGCGGAGTGGTTC...TGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCGCCAGAGTCCGCTTCTaGTGTACGTCAAAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFARVRF*CTSKSV
Trigger: CACACTCTTTGACGTACAGCAGAAGCGGACTCTGGC...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGATCCAGTGCTTTGGCTaGTTCCAGAGCAATCTCAAT +
Preference number: 2 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRIQCFG*FQSNLN
Trigger: ATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGAT...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATGTTCTTGTCATCCAGTaGTTTGGCTGCTTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDVLVIQ*FGCFQS
Trigger: GCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAAC...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATCAGGTCTCGAACTCCTaGCCTCAGATGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: SCSFLVDRKESCCGERRDQVSNS*PQMICP
Trigger: TGGGCAGATCATCTGAGGCCAGGAGTTCGAGACCTG...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCCAGGTCTCGAACTCCTaGCCTCAGATGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: DLSWTCSLGWGHKETIFSQVSNS*PQMICP
Trigger: TGGGCAGATCATCTGAGGCCAGGAGTTCGAGACCTG...GCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCAGGTATAGGGCATTCGGAAGATATGTACTTTaGTGGGGTGCCTGCATGGGT +
Preference number: 2 (lower is better)
Translates to: QFFRIRTRSDTSPRYRAFGRYVL*WGACMG
Trigger: ACCCATGCAGGCACCCCACCAAAGTACATATCTTCC...GAATGCCCTATACCTGGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGAACTCTTGGCGAGGGTaGAAGACGGCACAAGATACA +
Preference number: 2 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQNSWRG*KTAQDT
Trigger: TGTATCTTGTGCCGTCTTCCACCCTCGCCAAGAGTT...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCATGAACAGCATAGGCTaGCCGTTCCCGTTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFMNSIG*PFPFQL
Trigger: AAGCTGGAACGGGAACGGCCAGCCTATGCTGTTCAT...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCACTTGTTCCCTTGGTTaGGGGCACAAAGAAACCATC +
Preference number: 2 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSTCSLG*GHKETI
Trigger: GATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGT...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CCTGATAGGTTGTGCGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCTTGTAGGACACCAGATCTGAGTTaGACTTGTTCCCTTGGTTGG +
Preference number: 2 (lower is better)
Translates to: PDRLCGLGRMSVGTVACRTPDLS*TCSLGW
Trigger: CCAACCAAGGGAACAAGTCCAACTCAGATCTGGTGT...CCTACAAGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GCTTGTAGGGGCCAAACTGGATTACCCCTACTTGGTCATGAAGGAGCCGCATGGACACCAGATCTGAGTTaGACTTGTTCCCTTGGTTGG +
Preference number: 2 (lower is better)
Translates to: ACRGQTGLPLLGHEGAAWTPDLS*TCSLGW
Trigger: CCAACCAAGGGAACAAGTCCAACTCAGATCTGGTGT...CCATGCGGCTCCTTCATGACCAAGTAGGGGTAATCCAGTTTGGCCCCTACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGCTTCAGGCCCACAGCTaGTACACCATTCTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVLQAHS*YTILQP
Trigger: GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAG...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTTGAAGAACAGATTCTTCAGGCCCACAGCTaGTACACCATTCTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: APSKGGSCLEVLELEEQILQAHS*YTILQP
Trigger: GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAG...AATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 90 bp CAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTaGGCATTAGGGTCAATGTCTGGGATTGTCTCCTTCTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: QLVSNGMIGAGGWSS*ALGSMSGIVSFSGS
Trigger: TGACCCAGAGAAGGAGACAATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 90 bp CTCAAATTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAACCGTaGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATT +
Preference number: 2 (lower is better)
Translates to: LKFANCGELVAQLQP*DEVIKLQAHSWYTI
Trigger: AATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAACGGTTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAATTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCGGAACATATGGTGACTaGCCCATGCACACAAAGGGG +
Preference number: 2 (lower is better)
Translates to: DLSWTCSLGWGHKETIFSGTYGD*PMHTKG
Trigger: CCCCTTTGTGTGCATGGGTCAGTCACCATATGTTCC...GCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GGATGTGATCAACTGGAAGCTGAGAGTTATTACACCAGATCTGAGTTGGACTTGACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 2 (lower is better)
Translates to: GCDQLEAESYYTRSELDLTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...CAAGTCCAACTCAGATCTGGTGTAATAACTCTCAGCTTCCAGTTGATCACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGATGGAACGGAACATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 2 (lower is better)
Translates to: LLFIVHNKKWHTEKDGTEHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...TTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTAGGAAGGAAAATGGGAGATaGTTAAGAGTTGGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: AHSWYTILQPCILPVAIRKENGR*LRVGVA
Trigger: GGCCACACCAACTCTTAATCATCTCCCATTTTCCTT...CCTAATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GCCATGGGTAGCAGCTGTGAGATAGGCCAGGGACTTCTGTCCACAGTTCTTCAGAAGGAAAATGGGAGATaGTTAAGAGTTGGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: AMGSSCEIGQGLLSTVLQKENGR*LRVGVA
Trigger: GGCCACACCAACTCTTAATCATCTCCCATTTTCCTT...CTGAAGAACTGTGGACAGAAGTCCCTGGCCTATCTCACAGCTGCTACCCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCACTTCTTCAAATTTCTaGGTACACAGAGGGTACCTG +
Preference number: 2 (lower is better)
Translates to: ASGPQLVHHSSALHPSSCTSSNF*VHRGYL
Trigger: CAGGTACCCTCTGTGTACTCAGAAATTTGAAGAAGT...GCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CCACACTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTCAGTGGGATCAATGGTaGGTACCCGGGGACGACACT +
Preference number: 2 (lower is better)
Translates to: PHSSARLKRVFSSLTKCSQWDQW*VPGDDT
Trigger: AGTGTCGTCCCCGGGTACTCACCATTGATCCCACTG...ACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCCTTTCTGATTTGCCAACTGTGGTaGGCTGGTAGCACAGCTGCA +
Preference number: 2 (lower is better)
Translates to: HRCASAVLESLWAASSFLICQLW*AGSTAA
Trigger: TGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAAT...CAGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTTGAAGAACAGATTATTTGCCAACTGTGGTaGGCTGGTAGCACAGCTGCA +
Preference number: 2 (lower is better)
Translates to: APSKGGSCLEVLELEEQIICQLW*AGSTAA
Trigger: TGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAAT...AATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGATTTGCCAACTGTGGTaGGCTGGTAGCACAGCTGCA +
Preference number: 2 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVICQLW*AGSTAA
Trigger: TGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAAT...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGCAAGAAGTGGCACACTaGGAAGGATGGAACGGAATT +
Preference number: 2 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQQEVAH*EGWNGI
Trigger: AATTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTG...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATTTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SCSFLVDRKESCCGERRDFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGTAGGCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTTTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: GRHLWDSSHRQTGFFGSVFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...AACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCAACGATCATGGTCTCTaGGGAAAGTCTGAACCCCAG +
Preference number: 2 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFNDHGL*GKSEPQ
Trigger: CTGGGGTTCAGACTTTCCGCAGAGACCATGATCGTT...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TGGTGGTTCCCCTGCAGCAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTTGTGTACAAAGCAGGACTaGATTTTCTGCTGGATTGTA +
Preference number: 2 (lower is better)
Translates to: WWFPCSRATSPSFSQQFLCTKQD*IFCWIV
Trigger: TACAATCCAGCAGAAAATGCAGTCCTGCTTTGTACA...CAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTGCTGCAGGGGAACCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CACAGCTGCAACCGTTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACAGCAGGAGATTGCCTGTaGCAGCATAGAAGATCTCAT +
Preference number: 2 (lower is better)
Translates to: HSCNRWMRSLSFRPTAGTAGDCL*QHRRSH
Trigger: ATGAGATCTTCTATGCTGGCACAGGCAATCTCCTGC...TGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAACGGTTGCAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGCCAGAGTCCGCTTCTaGTGTACGTCAAAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: QLVSNGMIGAGGWSSLALARVRF*CTSKSV
Trigger: CACACTCTTTGACGTACAGCAGAAGCGGACTCTGGC...TAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp ACCCACAATGTACTCACGGCAAATGGTGATGAGCTGCTGGGCCTCTGCAATCTCAGAAATCTTCACAGATaGCAGAGTCCGCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: THNVLTANGDELLGLCNLRNLHR*QSPLLL
Trigger: CAGCAGAAGCGGACTCTGGCATCTGTGAAGATTTCT...GAGATTGCAGAGGCCCAGCAGCTCATCACCATTTGCCGTGAGTACATTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGGTTTCCACACTCCAGTaGCAGACTAAAGCGAGTTTT +
Preference number: 2 (lower is better)
Translates to: SFRPTAGTPFFSPASFQLVSTLQ*QTKASF
Trigger: AAAACTCGCTTTAGTCTGGCACTGGAGTGTGGAAAC...CAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCTTGTAGGGGCCAAACTGGATTACCCCTACTTGGTCATGAAGGAGCCGCATGGATCCAGTGCTTTGGCTaGTTCCAGAGCAATCTCAAT +
Preference number: 2 (lower is better)
Translates to: ACRGQTGLPLLGHEGAAWIQCFG*FQSNLN
Trigger: ATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGAT...CCATGCGGCTCCTTCATGACCAAGTAGGGGTAATCCAGTTTGGCCCCTACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCGTTCTTGTCATCCAGTaGTTTGGCTGCTTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFVLVIQ*FGCFQS
Trigger: GCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAAC...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCGAGCTGCTGGGCCTCTaGAATCTCTTGTTTATTGTC +
Preference number: 2 (lower is better)
Translates to: ASVGFFSQADRIFRVCWAELLGL*NLLFIV
Trigger: GACAATAAACAAGAGATTGCAGAGGCCCAGCAGCTC...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATCAAATGGTGATGAGCTaGTGGGCCTCTGCAATCTCT +
Preference number: 2 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDQMVMS*WASAIS
Trigger: AGAGATTGCAGAGGCCCAGCAGCTCATCACCATTTG...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATTGATCAGAAGCGAATaGATCCGATCTAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: GPTEWTLFYWLSTVDGPILIRSE*IRSRTA
Trigger: TGCTGTCCTAGATCGGATGCATTCGCTTCTGATCAA...TATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: KDGTEFFHSLLKFANCGEGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AGGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCGAGATGATTAAGAGTTaGTGTGGCCTAGTCACACCA +
Preference number: 2 (lower is better)
Translates to: RPIGIQWHDRCRWLEQLGEMIKS*CGLVTP
Trigger: TGGTGTGACTAGGCCACACCAACTCTTAATCATCTC...GCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATGGTGGGGTGCCTGCATaGGTGAACAAGAACATGAGA +
Preference number: 2 (lower is better)
Translates to: SCSFLVDRKESCCGERRDGGVPA*VNKNMR
Trigger: TCTCATGTTCTTGTTCACCCATGCAGGCACCCCACC...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241704.8
ENST00000649676.1
ENST00000649963.1
3UTR-3UTR CCA 90 bp TTGAAGTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCCTGAGGATCAACTCTTaGCGAGGGTGGAAGACGGCA +
Preference number: 2 (lower is better)
Translates to: LKFLSLKNRLRAVRSTRILRINS*RGWKTA
Trigger: TGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAG...GATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATGAAGCATCAGGATTCTaGGAGTCAGCATCTTTAGGG +
Preference number: 2 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDEASGF*ESASLG
Trigger: CCCTAAAGATGCTGACTCCCAGAATCCTGATGCTTC...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647799.1
3UTR-3UTR CCA 90 bp AGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGAGATCTCATCACAGTTaGGCACCTGTACCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: SFRPTAGTPFFSPASFQLRSHHS*APVPFW
Trigger: CCAAAAAGGTACAGGTGCCCAACTGTGATGAGATCT...CAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGATTAGGGTCAATGTCTaGGATTGTCTCCTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: SFRPTAGTPFFSPASFQLIRVNV*DCLLLW
Trigger: CCAGAGAAGGAGACAATCCCAGACATTGACCCTAAT...CAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATACTTGTTCCCTTGGTTaGGGGCACAAAGAAACCATC +
Preference number: 2 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDTCSLG*GHKETI
Trigger: GATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGT...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 90 bp GTCCGCTTAGACATATCCCAGACTCGAATACTCTTGTCCTCAGAATaGCTGAGGATCAACTCTTGGCGAGGGTGGAAGACGGCACAAGAT +
Preference number: 2 (lower is better)
Translates to: VRLDISQTRILLSSE*LRINSWRGWKTAQD
Trigger: ATCTTGTGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAGCAATTCTGAGGACAAGAGTATTCGAGTCTGGGATATGTCTAAGCGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCCATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 2 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CCTGATAGGTTGTGCGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCTTGTAGGTGGAATGAAGTGGTATaGTCTCAGTTGAATGCAACC +
Preference number: 2 (lower is better)
Translates to: PDRLCGLGRMSVGTVACRWNEVV*SQLNAT
Trigger: GGTTGCATTCAACTGAGATCATACCACTTCATTCCA...CCTACAAGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTGGAATGAAGTGGTATaGTCTCAGTTGAATGCAACC +
Preference number: 2 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSWNEVV*SQLNAT
Trigger: GGTTGCATTCAACTGAGATCATACCACTTCATTCCA...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGTCTCTGCGGAAAGTCTaGACCCCAGTCCGCTTAGAC +
Preference number: 2 (lower is better)
Translates to: ASAISCLLSTTRSGTLRRSLRKV*TPVRLD
Trigger: GTCTAAGCGGACTGGGGTTCAGACTTTCCGCAGAGA...CCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp AGGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCGTAAGAATCGGTCCTTaGCATAGTGTAGCATATTGC +
Preference number: 2 (lower is better)
Translates to: RPIGIQWHDRCRWLEQLGVRIGP*HSVAYC
Trigger: GCAATATGCTACACTATGTCAAGGACCGATTCTTAC...GCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TGCGGTTACAGATCACAATGGCGTGTTTGGCTAGTAGTGCTACATGTGACATGTAATCCAGAGTTCGAATaGTCCCGTGGTCCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: CGYRSQWRVWLVVLHVTCNPEFE*SRGPQW
Trigger: CCACTGGGGACCACGGGATCATTCGAACTCTGGATT...ACATGTCACATGTAGCACTACTAGCCAAACACGCCATTGTGATCTGTAACCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATCAAGAAGTGGCACACTaGGAAGGATGGAACGGAATT +
Preference number: 2 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDQEVAH*EGWNGI
Trigger: AATTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTG...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTCTTCAGATTCTTGATCAGAAGCGAATGCATCCGATCTAGGACAGCAAACCGAAACGGCTGTCAGGCCTaGGGATCGTTTCCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: FFRFLIRSECIRSRTANRNGCQA*GSFPFR
Trigger: CCTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTT...TCGGTTTGCTGTCCTAGATCGGATGCATTCGCTTCTGATCAAGAATCTGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCAGGCGCATGCTACCATaGCAGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: ASGPQLVHHSSALHPSSCRRMLP*QANFYI
Trigger: AATATAAAAATTAGCCTGGCATGGTAGCATGCGCCT...GCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAACACTTGACGATCATCTaGCCCAGATACAATAAGGGG +
Preference number: 2 (lower is better)
Translates to: FHSLLKFANCGELVAQLQHLTII*PRYNKG
Trigger: CCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTG...TTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCAACGATCATGGTCTCTaGGGAAAGTCTGAACCCCAG +
Preference number: 2 (lower is better)
Translates to: DLSWTCSLGWGHKETIFSNDHGL*GKSEPQ
Trigger: CTGGGGTTCAGACTTTCCGCAGAGACCATGATCGTT...GCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp ATCCAGTGCTTTGGCTGCTTCCAGAGCAATCTCAATGTTTCCACACTCCAGTGCCTCGAAGCAGGAGATTaGCTGTGCCAGCATAGAAGA +
Preference number: 2 (lower is better)
Translates to: IQCFGCFQSNLNVSTLQCLEAGD*LCQHRR
Trigger: TCTTCTATGCTGGCACAGGCAATCTCCTGCTTCGAG...GCACTGGAGTGTGGAAACATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGGCCAGAGTCCGCTTCTaGTGTACGTCAAAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: DGTEFFHSLLKFANCGELARVRF*CTSKSV
Trigger: CACACTCTTTGACGTACAGCAGAAGCGGACTCTGGC...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATCAACGTTTCCACACTCCAGTaGCAGACTAAAGCGAGTTTT +
Preference number: 2 (lower is better)
Translates to: VMKEPHGCFERACQDVINVSTLQ*QTKASF
Trigger: AAAACTCGCTTTAGTCTGGCACTGGAGTGTGGAAAC...GTTGATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGATCCAGTGCTTTGGCTaGTTCCAGAGCAATCTCAAT +
Preference number: 2 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQIQCFG*FQSNLN
Trigger: ATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGAT...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp ACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACAAATGTCAGGTCTCGAACTCCTaGCCTCAGATGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: TFLLAFHGRWADMMQHKCQVSNS*PQMICP
Trigger: TGGGCAGATCATCTGAGGCCAGGAGTTCGAGACCTG...ACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CTGATAGTGGCCACTCATGTCCTTTCTGATCTCAGCAATCTTCATCATCTTGCGAGGGGCATAGTGGGGTaGAAGGCAGCCCAGTTTACT +
Preference number: 2 (lower is better)
Translates to: LIVATHVLSDLSNLHHLARGIVG*KAAQFT
Trigger: AGTAAACTGGGCTGCCTTCCACCCCACTATGCCCCT...CGCAAGATGATGAAGATTGCTGAGATCAGAAAGGACATGAGTGGCCACTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CATGCGCCAGATCTTCACTTGACGATCATCTGCCCCAGATACAATAAGGGGCATAACTCTTGGCGAGGGTaGAAGACGGCACAAGATACA +
Preference number: 2 (lower is better)
Translates to: HAPDLHLTIICPRYNKGHNSWRG*KTAQDT
Trigger: TGTATCTTGTGCCGTCTTCCACCCTCGCCAAGAGTT...ATGCCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCAGGTATAGGGCATTCATCATACCACCATCATaGCCTGCTGCAAAGAGGTTA +
Preference number: 2 (lower is better)
Translates to: QFFRIRTRSDTSPRYRAFIIPPS*PAAKRL
Trigger: TAACCTCTTTGCAGCAGGCCATGATGGTGGTATGAT...GAATGCCCTATACCTGGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGATCATACCACCATCATaGCCTGCTGCAAAGAGGTTA +
Preference number: 2 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQIIPPS*PAAKRL
Trigger: TAACCTCTTTGCAGCAGGCCATGATGGTGGTATGAT...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCAAATGTCTCCTTTAGGCTCTCAGCTTCTTCATCTAAGCCATGGGTAGCAGCTGTTCGAATGATCCCGTaGTCCCCAGTGGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: SNVSFRLSASSSKPWVAAVRMIP*SPVVTA
Trigger: TGCTGTCACCACTGGGGACCACGGGATCATTCGAAC...AGCTGCTACCCATGGCTTAGATGAAGAAGCTGAGAGCCTAAAGGAGACATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAAACTGGCCAACTAGTTTaGCATTCCTCACCATGTGCA +
Preference number: 2 (lower is better)
Translates to: FHSLLKFANCGELVAQLQTGQLV*HSSPCA
Trigger: TGCACATGGTGAGGAATGCCAAACTAGTTGGCCAGT...TTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATACTGGCCAACTAGTTTaGCATTCCTCACCATGTGCA +
Preference number: 2 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDTGQLV*HSSPCA
Trigger: TGCACATGGTGAGGAATGCCAAACTAGTTGGCCAGT...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGATTTCCACAATCTGGTaGTTCCCCTGCAGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: ASAISCLLSTTRSGTLRRISTIW*FPCSRA
Trigger: GGCCCTGCTGCAGGGGAACCACCAGATTGTGGAAAT...CCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGCATGATAGGTGCAGGTaGCTGGAGCAGCTTGGCATT +
Preference number: 2 (lower is better)
Translates to: DGTEFFHSLLKFANCGELHDRCR*LEQLGI
Trigger: AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCCAATTGGTATCCAATaGCATGATAGGTGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFPIGIQ*HDRCRW
Trigger: CCACCTGCACCTATCATGCCATTGGATACCAATTGG...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATACACCAGATCTGAGTTaGACTTGTTCCCTTGGTTGG +
Preference number: 2 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDTPDLS*TCSLGW
Trigger: CCAACCAAGGGAACAAGTCCAACTCAGATCTGGTGT...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GAGAAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTCAAACGCGCACAGTCTaGTCCAGGCTGGCTGATACT +
Preference number: 2 (lower is better)
Translates to: EKDGTEFFHSLLKFANCGQTRTV*SRLADT
Trigger: AGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTG...ACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR CAA 90 bp CCAGACTCGAATACTCTTGTCCTCAGAATTGCTGAGGATCAACTCTaGGCGAGGGTGGAAGACGGCACAAGATACATTGTTGTAATGGCC +
Preference number: 2 (lower is better)
Translates to: PDSNTLVLRIAEDQL*ARVEDGTRYIVVMA
Trigger: GGCCATTACAACAATGTATCTTGTGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAGCAATTCTGAGGACAAGAGTATTCGAGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 90 bp TGCAGTACCTCATCATATTTTCTGTTGATCAGGGCCAGCTTGAATTaGAACTCAGTGGGATCAATGGTGAGTACCCGGGGACGACACTCC +
Preference number: 2 (lower is better)
Translates to: CSTSSYFLLIRASLN*NSVGSMVSTRGRHS
Trigger: GGAGTGTCGTCCCCGGGTACTCACCATTGATCCCACTGAGTTCAAATTCAAGCTGGCCCTGATCAACAGAAAATATGATGAGGTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGACATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 2 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TCCTTCTTCCTGTCCCTTGCCAAGAGCATCATCCCCCAAACCTTCTGTAGCCTCACTTCTTCAAATTTCTaGGTACACAGAGGGTACCTG +
Preference number: 2 (lower is better)
Translates to: SFFLSLAKSIIPQTFCSLTSSNF*VHRGYL
Trigger: CAGGTACCCTCTGTGTACTCAGAAATTTGAAGAAGT...GAGGCTACAGAAGGTTTGGGGGATGATGCTCTTGGCAAGGGACAGGAAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATAACCTCCCATGCCTTTaGTTCATTCATGCGCCAGAT +
Preference number: 2 (lower is better)
Translates to: SCSFLVDRKESCCGERRDNLPCL*FIHAPD
Trigger: ATCTGGCGCATGAATGAATCAAAGGCATGGGAGGTT...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGAGGTTAAGGTTAGGGTaGGCAGCTAGGACCCAGAAA +
Preference number: 2 (lower is better)
Translates to: DGTEFFHSLLKFANCGELRLRLG*AARTQK
Trigger: TTTCTGGGTCCTAGCTGCTCACCCTAACCTTAACCT...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CTGATAGTGGCCACTCATGTCCTTTCTGATCTCAGCAATCTTCATCATCTTGCGCCCAGGCCCCACTCTTaGCACGAATGTTCTCATGAA +
Preference number: 2 (lower is better)
Translates to: LIVATHVLSDLSNLHHLAPRPHS*HECSHE
Trigger: TTCATGAGAACATTCGTGTCAAGAGTGGGGCCTGGG...CGCAAGATGATGAAGATTGCTGAGATCAGAAAGGACATGAGTGGCCACTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp ACCAGATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTTGCCCTTCACCCGTGTaGCATAGATGGGTAAATCCA +
Preference number: 2 (lower is better)
Translates to: TRSELDLFPWLGAQRNHLCPSPV*HRWVNP
Trigger: TGGATTTACCCATCTATGTCACACGGGTGAAGGGCA...AAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGATTTGCCAACTGTGGTaGGCTGGTAGCACAGCTGCA +
Preference number: 2 (lower is better)
Translates to: KDGTEFFHSLLKFANCGEICQLW*AGSTAA
Trigger: TGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAAT...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GAGCCTGATAGGTTGTGCGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCTTGTAGGCGCATGCTACCATaGCAGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: EPDRLCGLGRMSVGTVACRRMLP*QANFYI
Trigger: AATATAAAAATTAGCCTGGCATGGTAGCATGCGCCT...ACAAGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGTTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: KDGTEFFHSLLKFANCGEFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGTTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: ASAISCLLSTTRSGTLRRFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...CCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GAGAAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGTTCAAGCAATCCTCTaGCTCAGCCTCCAGAGTAGC +
Preference number: 2 (lower is better)
Translates to: EKDGTEFFHSLLKFANCGVQAIL*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGAGGATTGCTTGAAC...ACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR GCA 90 bp AAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTCCTTTGATTCATTCATaGGCCAGATCTTCACTTGAC +
Preference number: 2 (lower is better)
Translates to: KLQAHSWYTILQPCILPVPLIHS*ARSSLD
Trigger: GTCAAGTGAAGATCTGGCGCATGAATGAATCAAAGG...AACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCCATAGTGTAGCATATTaGCATGAACAGCATAGGCTG +
Preference number: 2 (lower is better)
Translates to: SVGFFSQADRIFRVCWATHSVAY*HEQHRL
Trigger: CAGCCTATGCTGTTCATGGCAATATGCTACACTATG...GGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TTGAAGTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCCTCGAAGCAGGAGATTaGCTGTGCCAGCATAGAAGA +
Preference number: 2 (lower is better)
Translates to: LKFLSLKNRLRAVRSTRILEAGD*LCQHRR
Trigger: TCTTCTATGCTGGCACAGGCAATCTCCTGCTTCGAG...GATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGATAAAGCATCCAGTTTaGGGTTACAGATCACAATGG +
Preference number: 2 (lower is better)
Translates to: SFRPTAGTPFFSPASFQLIKHPV*GYRSQW
Trigger: CCATTGTGATCTGTAACCGCAAACTGGATGCTTTAT...CAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCATCCAGTGCTTTGGCTaGTTCCAGAGCAATCTCAAT +
Preference number: 2 (lower is better)
Translates to: LDEVIKLQAHSWYTILQPIQCFG*FQSNLN
Trigger: ATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGAT...GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCAATGGCATGATAGGTaGAGGTGGCTGGAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: KDGTEFFHSLLKFANCGEQWHDR*RWLEQL
Trigger: AAGCTGCTCCAGCCACCTGCACCTATCATGCCATTG...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGCAAATGGTGATGAGCTaGTGGGCCTCTGCAATCTCT +
Preference number: 2 (lower is better)
Translates to: DGTEFFHSLLKFANCGELQMVMS*WASAIS
Trigger: AGAGATTGCAGAGGCCCAGCAGCTCATCACCATTTG...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp ACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACAAATGTAGCACCAGGATCATGTaGACAGGCTGCAGGTTTGAG +
Preference number: 2 (lower is better)
Translates to: TFLLAFHGRWADMMQHKCSTRIM*TGCRFE
Trigger: CTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCT...ACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCCCCACTATAGACACATTCTCTaGGGGGAACATATGGTGACT +
Preference number: 2 (lower is better)
Translates to: ELDLFPWLGAQRNHLQPHYRHIL*GEHMVT
Trigger: AGTCACCATATGTTCCCCCCAGAGAATGTGTCTATA...GTGGGGCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATAGATATGTACTTTGGTaGGGTGCCTGCATGGGTGAA +
Preference number: 2 (lower is better)
Translates to: SCSFLVDRKESCCGERRDRYVLW*GACMGE
Trigger: TTCACCCATGCAGGCACCCCACCAAAGTACATATCT...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241704.8
ENST00000649963.1
3UTR-3UTR CCA 90 bp GCCATCTCACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCTCACAATGGCGTGTTTaGCTAGTAGTGCTACATGTG +
Preference number: 2 (lower is better)
Translates to: AISQMRFCCSRVSLGSFFSQWRV*LVVLHV
Trigger: CACATGTAGCACTACTAGCCAAACACGCCATTGTGA...GAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTGAGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTCACAATGGCGTGTTTaGCTAGTAGTGCTACATGTG +
Preference number: 2 (lower is better)
Translates to: LDEVIKLQAHSWYTILQPSQWRV*LVVLHV
Trigger: CACATGTAGCACTACTAGCCAAACACGCCATTGTGA...GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCATTAGGGTCAATGTCTaGGATTGTCTCCTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: LDEVIKLQAHSWYTILQPIRVNV*DCLLLW
Trigger: CCAGAGAAGGAGACAATCCCAGACATTGACCCTAAT...GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGCCAATTGGTATCCAATaGCATGATAGGTGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVPIGIQ*HDRCRW
Trigger: CCACCTGCACCTATCATGCCATTGGATACCAATTGG...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCCTTTCTGTTGGACTTGTTCCCTTaGTTGGGGGCACAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: HRCASAVLESLWAASSFLLDLFP*LGAQRN
Trigger: GTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAA...CAGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTAGGCAGGATGTGATCAACTaGAAGCTGAGAGTTATTACA +
Preference number: 2 (lower is better)
Translates to: AHSWYTILQPCILPVAIRQDVIN*KLRVIT
Trigger: TGTAATAACTCTCAGCTTCCAGTTGATCACATCCTG...CCTAATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAAGGGCCACCTCAGGCTTaGGCCCGAGTTCTAGTAGGC +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSEGPPQA*ARVLVG
Trigger: GCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCC...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CCACACTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTGGCGCATCAGGATTCTaGGAGTCAGCATCTTTAGGG +
Preference number: 2 (lower is better)
Translates to: PHSSARLKRVFSSLTKCSGASGF*ESASLG
Trigger: CCCTAAAGATGCTGACTCCCAGAATCCTGATGCGCC...ACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 90 bp ACTGGAAACTTGGAACCACTCCGCAACTGCATCACAGCTACATCTTaGGAGCTGTTGAAATCCAGCTGTCGTAAGAATCGGTCCTTGACA +
Preference number: 2 (lower is better)
Translates to: TGNLEPLRNCITATS*ELLKSSCRKNRSLT
Trigger: TGTCAAGGACCGATTCTTACGACAGCTGGATTTCAACAGCTCCAAAGATGTAGCTGTGATGCAGTTGCGGAGTGGTTCCAAGTTTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 90 bp ACCATGTGCAGTACCTCATCATATTTTCTGTTGATCAGGGCCAGCTaGAATTTGAACTCAGTGGGATCAATGGTGAGTACCCGGGGACGA +
Preference number: 2 (lower is better)
Translates to: TMCSTSSYFLLIRAS*NLNSVGSMVSTRGR
Trigger: TCGTCCCCGGGTACTCACCATTGATCCCACTGAGTTCAAATTCAAGCTGGCCCTGATCAACAGAAAATATGATGAGGTACTGCACATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAACATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSEHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACTGGAATGAAGTGGTATaGTCTCAGTTGAATGCAACC +
Preference number: 2 (lower is better)
Translates to: VDTFLLAFHGRWADMMQHWNEVV*SQLNAT
Trigger: GGTTGCATTCAACTGAGATCATACCACTTCATTCCA...GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TCAAATGTCTCCTTTAGGCTCTCAGCTTCTTCATCTAAGCCATGGGTAGCAGCTTGTCCTCAGAATTGCTaGGGATCAACTCTTGGCGAG +
Preference number: 2 (lower is better)
Translates to: SNVSFRLSASSSKPWVAACPQNC*GSTLGE
Trigger: CTCGCCAAGAGTTGATCCTCAGCAATTCTGAGGACA...AGCTGCTACCCATGGCTTAGATGAAGAAGCTGAGAGCCTAAAGGAGACATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CACACTGAGAAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACAGGTTAAGGTTAGGGTaGGCAGCTAGGACCCAGAAA +
Preference number: 2 (lower is better)
Translates to: HTEKDGTEFFHSLLKFANRLRLG*AARTQK
Trigger: TTTCTGGGTCCTAGCTGCTCACCCTAACCTTAACCT...GTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTTCTCAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTTTGGTACGCTGATAGCACATTTCCACAATCTGGTGGTTCCCCTGCAGCAGGGGTAAGAATCGGTCCTTaGCATAGTGTAGCATATTGC +
Preference number: 2 (lower is better)
Translates to: FWYADSTFPQSGGSPAAGVRIGP*HSVAYC
Trigger: GCAATATGCTACACTATGTCAAGGACCGATTCTTAC...CCCTGCTGCAGGGGAACCACCAGATTGTGGAAATGTGCTATCAGCGTACCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAATCCAGAGTTCGAATaGTCCCGTGGTCCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGENPEFE*SRGPQW
Trigger: CCACTGGGGACCACGGGATCATTCGAACTCTGGATT...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGAGTTTTCTCATCCTTaGCAAAATGCAGTGCCACTT +
Preference number: 2 (lower is better)
Translates to: WMRSLSFRPTAGTPFFSPEFSHP*QNAVPL
Trigger: AAGTGGCACTGCATTTTGTCAAGGATGAGAAAACTC...AGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATCACTCATGTCCTTTCTaGTCTCAGCAATCTTCATCA +
Preference number: 2 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDHSCPF*SQQSSS
Trigger: TGATGAAGATTGCTGAGATCAGAAAGGACATGAGTG...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTCTGTCCACAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCAGGTATCATTCTTCAGATTCTTaGTCAGAAGCGAATGCATCC +
Preference number: 2 (lower is better)
Translates to: FCPQFFRIRTRSDTSPRYHSSDS*SEANAS
Trigger: GGATGCATTCGCTTCTGATCAAGAATCTGAAGAATG...ATACCTGGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTGTGGACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAATTAGAGACGGGGTGTTaGCATGTTGGCCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGELETGC*HVGQAG
Trigger: ACCTGCCTGGCCAACATGGCAACACCCCGTCTCTAA...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGCCAGCTTGAATTTGAACTCAGTGGGATCAATGGTGAGTACCCGGGGACGACAAGGCGCATGCTACCATaGCAGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: GQLEFELSGINGEYPGTTRRMLP*QANFYI
Trigger: AATATAAAAATTAGCCTGGCATGGTAGCATGCGCCT...TGTCGTCCCCGGGTACTCACCATTGATCCCACTGAGTTCAAATTCAAGCTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CCAGCAGTTCTTGTCATCCAGTGCTTTGGCTGCTTCCAGAGCAATCTCAATGTTGAACCACTCCGCAACTaGATCACAGCTACATCTTTG +
Preference number: 2 (lower is better)
Translates to: PAVLVIQCFGCFQSNLNVEPLRN*ITATSL
Trigger: CAAAGATGTAGCTGTGATGCAGTTGCGGAGTGGTTC...AACATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAACTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATCAACTGTACAAAGCAGGACTaGATTTTCTGCTGGATTGTA +
Preference number: 2 (lower is better)
Translates to: VMKEPHGCFERACQDVINCTKQD*IFCWIV
Trigger: TACAATCCAGCAGAAAATGCAGTCCTGCTTTGTACA...GTTGATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATTGTACAAAGCAGGACTaGATTTTCTGCTGGATTGTA +
Preference number: 2 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDCTKQD*IFCWIV
Trigger: TACAATCCAGCAGAAAATGCAGTCCTGCTTTGTACA...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTTGTACAAAGCAGGACTaGATTTTCTGCTGGATTGTA +
Preference number: 2 (lower is better)
Translates to: KLQAHSWYTILQPCILPVCTKQD*IFCWIV
Trigger: TACAATCCAGCAGAAAATGCAGTCCTGCTTTGTACA...AACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATATAAAGCATCCAGTTTaGGGTTACAGATCACAATGG +
Preference number: 2 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDIKHPV*GYRSQW
Trigger: CCATTGTGATCTGTAACCGCAAACTGGATGCTTTAT...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCCTTTCTGGTTTCCACACTCCAGTaGCAGACTAAAGCGAGTTTT +
Preference number: 2 (lower is better)
Translates to: HRCASAVLESLWAASSFLVSTLQ*QTKASF
Trigger: AAAACTCGCTTTAGTCTGGCACTGGAGTGTGGAAAC...CAGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGTCACAGATGCGCTTCTaGTGTTCTAGAGTCTCTTTG +
Preference number: 2 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVSQMRF*CSRVSL
Trigger: CAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTGA...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATTCACAGATGCGCTTCTaGTGTTCTAGAGTCTCTTTG +
Preference number: 2 (lower is better)
Translates to: SCSFLVDRKESCCGERRDSQMRF*CSRVSL
Trigger: CAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTGA...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATGAGATGATTAAGAGTTaGTGTGGCCTAGTCACACCA +
Preference number: 2 (lower is better)
Translates to: SCSFLVDRKESCCGERRDEMIKS*CGLVTP
Trigger: TGGTGTGACTAGGCCACACCAACTCTTAATCATCTC...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GCTGCTTCCAGAGCAATCTCAATGTTTCCACACTCCAGTGCCAGACTAAAGCGATCACAATGGCGTGTTTaGCTAGTAGTGCTACATGTG +
Preference number: 2 (lower is better)
Translates to: AASRAISMFPHSSARLKRSQWRV*LVVLHV
Trigger: CACATGTAGCACTACTAGCCAAACACGCCATTGTGA...TCGCTTTAGTCTGGCACTGGAGTGTGGAAACATTGAGATTGCTCTGGAAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAGGAACATATGGTGACTaGCCCATGCACACAAAGGGG +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGEGTYGD*PMHTKG
Trigger: CCCCTTTGTGTGCATGGGTCAGTCACCATATGTTCC...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GAGATGATTAAGAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 2 (lower is better)
Translates to: EMIKSWCGLVTPKCIYYITPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...GATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTCTTAATCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GAGATGATTAAGAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 2 (lower is better)
Translates to: EMIKSWCGLVTPKCIYYIHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...GATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTCTTAATCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATTGGAATGAAGTGGTATaGTCTCAGTTGAATGCAACC +
Preference number: 2 (lower is better)
Translates to: SCSFLVDRKESCCGERRDWNEVV*SQLNAT
Trigger: GGTTGCATTCAACTGAGATCATACCACTTCATTCCA...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATACTTCTTCAAATTTCTaGGTACACAGAGGGTACCTG +
Preference number: 2 (lower is better)
Translates to: SCSFLVDRKESCCGERRDTSSNF*VHRGYL
Trigger: CAGGTACCCTCTGTGTACTCAGAAATTTGAAGAAGT...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GGAAACTTGGAACCACTCCGCAACTGCATCACAGCTACATCTTTGGAGCTGTTGGTAAGAATCGGTCCTTaGCATAGTGTAGCATATTGC +
Preference number: 2 (lower is better)
Translates to: GNLEPLRNCITATSLELLVRIGP*HSVAYC
Trigger: GCAATATGCTACACTATGTCAAGGACCGATTCTTAC...CAACAGCTCCAAAGATGTAGCTGTGATGCAGTTGCGGAGTGGTTCCAAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATACACGAATGTTCTCATaGATGTTACATAAAGCATCC +
Preference number: 2 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDTRMFS*MLHKAS
Trigger: GGATGCTTTATGTAACATTCATGAGAACATTCGTGT...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CCTTTCTGTCTCCACGGACAAACCCACAATGTACTCACGGCAAATGGTGATGAGGAGTTTTCTCATCCTTaGCAAAATGCAGTGCCACTT +
Preference number: 2 (lower is better)
Translates to: PFCLHGQTHNVLTANGDEEFSHP*QNAVPL
Trigger: AAGTGGCACTGCATTTTGTCAAGGATGAGAAAACTC...CTCATCACCATTTGCCGTGAGTACATTGTGGGTTTGTCCGTGGAGACAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCGCAGGTTTGAGTGGGTaGAATAGGCTGCCATCTCAC +
Preference number: 2 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFAGLSG*NRLPSH
Trigger: GTGAGATGGCAGCCTATTTCACCCACTCAAACCTGC...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCGTTCAAGCAATCCTCTaGCTCAGCCTCCAGAGTAGC +
Preference number: 2 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFVQAIL*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGAGGATTGCTTGAAC...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241704.8
ENST00000649963.1
3UTR-3UTR GCA 90 bp TGCGGTTACAGATCACAATGGCGTGTTTGGCTAGTAGTGCTACATGTGACATGTCACTTGACGATCATCTaGCCCAGATACAATAAGGGG +
Preference number: 2 (lower is better)
Translates to: CGYRSQWRVWLVVLHVTCHLTII*PRYNKG
Trigger: CCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTG...ACATGTCACATGTAGCACTACTAGCCAAACACGCCATTGTGATCTGTAACCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CTGATAGTGGCCACTCATGTCCTTTCTGATCTCAGCAATCTTCATCATCTTGCGCACTTGACGATCATCTaGCCCAGATACAATAAGGGG +
Preference number: 2 (lower is better)
Translates to: LIVATHVLSDLSNLHHLAHLTII*PRYNKG
Trigger: CCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTG...CGCAAGATGATGAAGATTGCTGAGATCAGAAAGGACATGAGTGGCCACTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TGCGGTTACAGATCACAATGGCGTGTTTGGCTAGTAGTGCTACATGTGACATGTACCATCATGGCCTGCTaGAAAGAGGTTAAGGTTAGG +
Preference number: 2 (lower is better)
Translates to: CGYRSQWRVWLVVLHVTCTIMAC*KEVKVR
Trigger: CCTAACCTTAACCTCTTTGCAGCAGGCCATGATGGT...ACATGTCACATGTAGCACTACTAGCCAAACACGCCATTGTGATCTGTAACCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGCATAGTGTAGCATATTaGCATGAACAGCATAGGCTG +
Preference number: 2 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVHSVAY*HEQHRL
Trigger: CAGCCTATGCTGTTCATGGCAATATGCTACACTATG...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CTGATAGTGGCCACTCATGTCCTTTCTGATCTCAGCAATCTTCATCATCTTGCGGCAGGAGATTGCCTGTaGCAGCATAGAAGATCTCAT +
Preference number: 2 (lower is better)
Translates to: LIVATHVLSDLSNLHHLAAGDCL*QHRRSH
Trigger: ATGAGATCTTCTATGCTGGCACAGGCAATCTCCTGC...CGCAAGATGATGAAGATTGCTGAGATCAGAAAGGACATGAGTGGCCACTATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CACACTGAGAAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACGCAGGAGATTGCCTGTaGCAGCATAGAAGATCTCAT +
Preference number: 2 (lower is better)
Translates to: HTEKDGTEFFHSLLKFANAGDCL*QHRRSH
Trigger: ATGAGATCTTCTATGCTGGCACAGGCAATCTCCTGC...GTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTTCTCAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGGTTTCCACACTCCAGTaGCAGACTAAAGCGAGTTTT +
Preference number: 2 (lower is better)
Translates to: DGTEFFHSLLKFANCGELVSTLQ*QTKASF
Trigger: AAAACTCGCTTTAGTCTGGCACTGGAGTGTGGAAAC...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCAGCACCAGGATCATGTaGACAGGCTGCAGGTTTGAG +
Preference number: 2 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFSTRIM*TGCRFE
Trigger: CTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCT...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTGCCACTTGATCAGAAGCGAATaGATCCGATCTAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: LQCQTKASFLILDKMQCHLIRSE*IRSRTA
Trigger: TGCTGTCCTAGATCGGATGCATTCGCTTCTGATCAA...GTGGCACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTTGAAGAACAGATTGAGGGCTTTGATCAGAAGCGAATaGATCCGATCTAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: AKVAAVLKFLSLKNRLRALIRSE*IRSRTA
Trigger: TGCTGTCCTAGATCGGATGCATTCGCTTCTGATCAA...AGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp ACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACAAATGTACACAGGTTCTAGATTaGCAGTTCCACACTCGGATG +
Preference number: 2 (lower is better)
Translates to: TFLLAFHGRWADMMQHKCTQVLD*QFHTRM
Trigger: CATCCGAGTGTGGAACTGGCAATCTAGAACCTGTGT...ACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CCA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGACAGGTCTCGAACTCCTaGCCTCAGATGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGQVSNS*PQMICP
Trigger: TGGGCAGATCATCTGAGGCCAGGAGTTCGAGACCTG...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAAGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSEGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTCCAGAGCAATCTCAATGTTTCCACACTCCAGTGCCAGACTAAAGCGAGTTTTAACTCTTGGCGAGGGTaGAAGACGGCACAAGATACA +
Preference number: 2 (lower is better)
Translates to: FQSNLNVSTLQCQTKASFNSWRG*KTAQDT
Trigger: TGTATCTTGTGCCGTCTTCCACCCTCGCCAAGAGTT...AAAACTCGCTTTAGTCTGGCACTGGAGTGTGGAAACATTGAGATTGCTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGAGATCTCATCACAGTTaGGCACCTGTACCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: DGTEFFHSLLKFANCGELRSHHS*APVPFW
Trigger: CCAAAAAGGTACAGGTGCCCAACTGTGATGAGATCT...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGATGGAACGGAATTTATTTCCACAATCTGGTaGTTCCCCTGCAGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: LFIVHNKKWHTEKDGTEFISTIW*FPCSRA
Trigger: GGCCCTGCTGCAGGGGAACCACCAGATTGTGGAAAT...AAATTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAACATGATAGGTGCAGGTaGCTGGAGCAGCTTGGCATT +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGEHDRCR*LEQLGI
Trigger: AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGAATTTTTCGGGTCTGTTaGGCCACCTCAGGCTTGGGC +
Preference number: 2 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGIFRVC*ATSGLG
Trigger: GCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAAT...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTAGACATATCCCAGACTCGAATACTCTTGTCCTCAGAATTGCTGAGGATCAACGGCGCATCAGGATTCTaGGAGTCAGCATCTTTAGGG +
Preference number: 2 (lower is better)
Translates to: LDISQTRILLSSELLRINGASGF*ESASLG
Trigger: CCCTAAAGATGCTGACTCCCAGAATCCTGATGCGCC...GTTGATCCTCAGCAATTCTGAGGACAAGAGTATTCGAGTCTGGGATATGTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGAGGAACATATGGTGACTaGCCCATGCACACAAAGGGG +
Preference number: 2 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGGTYGD*PMHTKG
Trigger: CCCCTTTGTGTGCATGGGTCAGTCACCATATGTTCC...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GTAAAGAACAAATCAATAACCCGCAGTGTGCATTTTGGAAAACCAAATAACTTCACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 2 (lower is better)
Translates to: VKNKSITRSVHFGKPNNFTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...GAAGTTATTTGGTTTTCCAAAATGCACACTGCGGGTTATTGATTTGTTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp ATGAGCTGCTGGGCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCTGGAATGAAGTGGTATaGTCTCAGTTGAATGCAACC +
Preference number: 2 (lower is better)
Translates to: MSCWASAISCLLSTTRSGWNEVV*SQLNAT
Trigger: GGTTGCATTCAACTGAGATCATACCACTTCATTCCA...GCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGCCCAGCAGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TGCCACTTCAGGATAGCCCTTCTTCTGGAGATAAGCAATAATAGACTGGCCAACAAGGAAAATGGGAGATaGTTAAGAGTTGGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: CHFRIALLLEISNNRLANKENGR*LRVGVA
Trigger: GGCCACACCAACTCTTAATCATCTCCCATTTTCCTT...GTTGGCCAGTCTATTATTGCTTATCTCCAGAAGAAGGGCTATCCTGAAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTGCCACACTTCTTCAAATTTCTaGGTACACAGAGGGTACCTG +
Preference number: 2 (lower is better)
Translates to: LQCQTKASFLILDKMQCHTSSNF*VHRGYL
Trigger: CAGGTACCCTCTGTGTACTCAGAAATTTGAAGAAGT...GTGGCACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTGCCACGTAAGAATCGGTCCTTaGCATAGTGTAGCATATTGC +
Preference number: 2 (lower is better)
Translates to: LQCQTKASFLILDKMQCHVRIGP*HSVAYC
Trigger: GCAATATGCTACACTATGTCAAGGACCGATTCTTAC...GTGGCACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTACACGAATGTTCTCATaGATGTTACATAAAGCATCC +
Preference number: 2 (lower is better)
Translates to: WMRSLSFRPTAGTPFFSPTRMFS*MLHKAS
Trigger: GGATGCTTTATGTAACATTCATGAGAACATTCGTGT...AGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp ATGAGCTGCTGGGCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCCACTCATGTCCTTTCTaGTCTCAGCAATCTTCATCA +
Preference number: 2 (lower is better)
Translates to: MSCWASAISCLLSTTRSGHSCPF*SQQSSS
Trigger: TGATGAAGATTGCTGAGATCAGAAAGGACATGAGTG...GCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGCCCAGCAGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp ACCAGATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCACTCATGTCCTTTCTaGTCTCAGCAATCTTCATCA +
Preference number: 2 (lower is better)
Translates to: TRSELDLFPWLGAQRNHLHSCPF*SQQSSS
Trigger: TGATGAAGATTGCTGAGATCAGAAAGGACATGAGTG...AAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAATTAGAGACGGGGTGTTaGCATGTTGGCCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSELETGC*HVGQAG
Trigger: ACCTGCCTGGCCAACATGGCAACACCCCGTCTCTAA...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGATTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTTGAAGAACAGATTGAGGGCTCCTTTGATTCATTCATaGGCCAGATCTTCACTTGAC +
Preference number: 2 (lower is better)
Translates to: AKVAAVLKFLSLKNRLRAPLIHS*ARSSLD
Trigger: GTCAAGTGAAGATCTGGCGCATGAATGAATCAAAGG...AGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGCATAGTGTAGCATATTaGCATGAACAGCATAGGCTG +
Preference number: 2 (lower is better)
Translates to: DGTEFFHSLLKFANCGELHSVAY*HEQHRL
Trigger: CAGCCTATGCTGTTCATGGCAATATGCTACACTATG...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTTGAAGAACAGATTATAAAGCATCCAGTTTaGGGTTACAGATCACAATGG +
Preference number: 2 (lower is better)
Translates to: APSKGGSCLEVLELEEQIIKHPV*GYRSQW
Trigger: CCATTGTGATCTGTAACCGCAAACTGGATGCTTTAT...AATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGGCATTCCTCACCATGTaGAGTACCTCATCATATTTT +
Preference number: 2 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVAFLTM*STSSYF
Trigger: AAAATATGATGAGGTACTGCACATGGTGAGGAATGC...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAGTGGGTGAAATAGGCTaGCATCTCACAGATGCGCTT +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGEVGEIG*HLTDAL
Trigger: AAGCGCATCTGTGAGATGGCAGCCTATTTCACCCAC...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAACAGGTCTCGAACTCCTaGCCTCAGATGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSEQVSNS*PQMICP
Trigger: TGGGCAGATCATCTGAGGCCAGGAGTTCGAGACCTG...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GAGATGATTAAGAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: EMIKSWCGLVTPKCIYYIGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...GATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTCTTAATCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GAGAAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGATGATTAAGAGTTaGTGTGGCCTAGTCACACCA +
Preference number: 2 (lower is better)
Translates to: EKDGTEFFHSLLKFANCGEMIKS*CGLVTP
Trigger: TGGTGTGACTAGGCCACACCAACTCTTAATCATCTC...ACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGATGGAACGGAATTTGGTGGGGTGCCTGCATaGGTGAACAAGAACATGAGA +
Preference number: 2 (lower is better)
Translates to: LFIVHNKKWHTEKDGTEFGGVPA*VNKNMR
Trigger: TCTCATGTTCTTGTTCACCCATGCAGGCACCCCACC...AAATTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CCA 90 bp CCACACTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTAGATCTCATCACAGTTaGGCACCTGTACCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: PHSSARLKRVFSSLTKCSRSHHS*APVPFW
Trigger: CCAAAAAGGTACAGGTGCCCAACTGTGATGAGATCT...ACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGATTAGGGTCAATGTCTaGGATTGTCTCCTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: KDGTEFFHSLLKFANCGEIRVNV*DCLLLW
Trigger: CCAGAGAAGGAGACAATCCCAGACATTGACCCTAAT...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp ACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACAAATGTGTTCTAGAGTCTCTTTaGGCAGCTTCTTCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: TFLLAFHGRWADMMQHKCVLESL*AASSFL
Trigger: CAGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAAC...ACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGAGCTTTCCACGGTAGATaGGCCGATATGATGCAGCAC +
Preference number: 2 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGAFHGR*ADMMQH
Trigger: GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGC...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGAAGTTCCACACTCGGATaGTCTGATCATCGGAGGCAC +
Preference number: 2 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGSSTLG*SDHRRH
Trigger: GTGCCTCCGATGATCAGACCATCCGAGTGTGGAACT...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR TCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAAGGAACATATGGTGACTaGCCCATGCACACAAAGGGG +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSEGTYGD*PMHTKG
Trigger: CCCCTTTGTGTGCATGGGTCAGTCACCATATGTTCC...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GTGATCAACTGGAAGCTGAGAGTTATTACACCAGATCTGAGTTGGACTTGTTCCAAGGAAAATGGGAGATaGTTAAGAGTTGGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: VINWKLRVITPDLSWTCSKENGR*LRVGVA
Trigger: GGCCACACCAACTCTTAATCATCTCCCATTTTCCTT...GGAACAAGTCCAACTCAGATCTGGTGTAATAACTCTCAGCTTCCAGTTGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTGAAGTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCCATTCTTCAGATTCTTaGTCAGAAGCATCAGGATTC +
Preference number: 2 (lower is better)
Translates to: LKFLSLKNRLRAVRSTRIHSSDS*SEASGF
Trigger: GAATCCTGATGCTTCTGATCAAGAATCTGAAGAATG...GATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647799.1
3UTR-3UTR TCA 90 bp TCAAATGTCTCCTTTAGGCTCTCAGCTTCTTCATCTAAGCCATGGGTAGCAGCTGAGTTTTCTCATCCTTaGCAAAATGCAGTGCCACTT +
Preference number: 2 (lower is better)
Translates to: SNVSFRLSASSSKPWVAAEFSHP*QNAVPL
Trigger: AAGTGGCACTGCATTTTGTCAAGGATGAGAAAACTC...AGCTGCTACCCATGGCTTAGATGAAGAAGCTGAGAGCCTAAAGGAGACATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GAGATGATTAAGAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCTTAGAGACGGGGTGTTaGCATGTTGGCCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: EMIKSWCGLVTPKCIYYILETGC*HVGQAG
Trigger: ACCTGCCTGGCCAACATGGCAACACCCCGTCTCTAA...GATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTCTTAATCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GCAATCTCAATGTTTCCACACTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCCCTTTGATTCATTCATaGGCCAGATCTTCACTTGAC +
Preference number: 2 (lower is better)
Translates to: AISMFPHSSARLKRVFSSPLIHS*ARSSLD
Trigger: GTCAAGTGAAGATCTGGCGCATGAATGAATCAAAGG...GGATGAGAAAACTCGCTTTAGTCTGGCACTGGAGTGTGGAAACATTGAGATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GGTTACAGATCACAATGGCGTGTTTGGCTAGTAGTGCTACATGTGACATGTCTGCATAGTGTAGCATATTaGCATGAACAGCATAGGCTG +
Preference number: 2 (lower is better)
Translates to: GYRSQWRVWLVVLHVTCLHSVAY*HEQHRL
Trigger: CAGCCTATGCTGTTCATGGCAATATGCTACACTATG...CAGACATGTCACATGTAGCACTACTAGCCAAACACGCCATTGTGATCTGTAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAAAGCACCAGGATCATGTaGACAGGCTGCAGGTTTGAG +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSESTRIM*TGCRFE
Trigger: CTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCT...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTTTCACAGCAGTTTAGGTCCTCATATATACCCTATGAAAAACATGTGCTTCTTGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: FSQQFRSSYIPYEKHVLLGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...AAGAAGCACATGTTTTTCATAGGGTATATATGAGGACCTAAACTGCTGTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241704.8
ENST00000649963.1
3UTR-3UTR CCA 90 bp TCAGCAATCTTCATCATCTTGCGAAGTTTTTCTAAGTTGCCAGTGATAAGATACCTGAGGATCAACTCTTaGCGAGGGTGGAAGACGGCA +
Preference number: 2 (lower is better)
Translates to: SAIFIILRSFSKLPVIRYLRINS*RGWKTA
Trigger: TGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAG...GTATCTTATCACTGGCAACTTAGAAAAACTTCGCAAGATGATGAAGATTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAAGGAAAATGGGAGATaGTTAAGAGTTGGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGEKENGR*LRVGVA
Trigger: GGCCACACCAACTCTTAATCATCTCCCATTTTCCTT...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GTAAAGAACAAATCAATAACCCGCAGTGTGCATTTTGGAAAACCAAATAACTTCTCTCTGCGGAAAGTCTaGACCCCAGTCCGCTTAGAC +
Preference number: 2 (lower is better)
Translates to: VKNKSITRSVHFGKPNNFSLRKV*TPVRLD
Trigger: GTCTAAGCGGACTGGGGTTCAGACTTTCCGCAGAGA...GAAGTTATTTGGTTTTCCAAAATGCACACTGCGGGTTATTGATTTGTTCTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CTGATAGTGGCCACTCATGTCCTTTCTGATCTCAGCAATCTTCATCATCTTGCGAGGCGCATGCTACCATaGCAGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: LIVATHVLSDLSNLHHLARRMLP*QANFYI
Trigger: AATATAAAAATTAGCCTGGCATGGTAGCATGCGCCT...CGCAAGATGATGAAGATTGCTGAGATCAGAAAGGACATGAGTGGCCACTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCTGGAATGAAGTGGTATaGTCTCAGTTGAATGCAACC +
Preference number: 2 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFWNEVV*SQLNAT
Trigger: GGTTGCATTCAACTGAGATCATACCACTTCATTCCA...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAATGGAATGAAGTGGTATaGTCTCAGTTGAATGCAACC +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGEWNEVV*SQLNAT
Trigger: GGTTGCATTCAACTGAGATCATACCACTTCATTCCA...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TGCGGTTACAGATCACAATGGCGTGTTTGGCTAGTAGTGCTACATGTGACATGTACACGAATGTTCTCATaGATGTTACATAAAGCATCC +
Preference number: 2 (lower is better)
Translates to: CGYRSQWRVWLVVLHVTCTRMFS*MLHKAS
Trigger: GGATGCTTTATGTAACATTCATGAGAACATTCGTGT...ACATGTCACATGTAGCACTACTAGCCAAACACGCCATTGTGATCTGTAACCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AAATTTCTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAATTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: KFLSTQRVPALKFKCLRKFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...TTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAGAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCTATAGACACATTCTCTaGGGGGAACATATGGTGACT +
Preference number: 2 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFYRHIL*GEHMVT
Trigger: AGTCACCATATGTTCCCCCCAGAGAATGTGTCTATA...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAATATAGACACATTCTCTaGGGGGAACATATGGTGACT +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGEYRHIL*GEHMVT
Trigger: AGTCACCATATGTTCCCCCCAGAGAATGTGTCTATA...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGACACTCATGTCCTTTCTaGTCTCAGCAATCTTCATCA +
Preference number: 2 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGHSCPF*SQQSSS
Trigger: TGATGAAGATTGCTGAGATCAGAAAGGACATGAGTG...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCAGGCGCATGCTACCATaGCAGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFRRMLP*QANFYI
Trigger: AATATAAAAATTAGCCTGGCATGGTAGCATGCGCCT...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGCGCATGCTACCATaGCAGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGERRMLP*QANFYI
Trigger: AATATAAAAATTAGCCTGGCATGGTAGCATGCGCCT...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TTTTCACAGCAGTTTAGGTCCTCATATATACCCTATGAAAAACATGTGCTTCTTGGAAGATATGTACTTTaGTGGGGTGCCTGCATGGGT +
Preference number: 2 (lower is better)
Translates to: FSQQFRSSYIPYEKHVLLGRYVL*WGACMG
Trigger: ACCCATGCAGGCACCCCACCAAAGTACATATCTTCC...AAGAAGCACATGTTTTTCATAGGGTATATATGAGGACCTAAACTGCTGTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241704.8
ENST00000649963.1
3UTR-3UTR TCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAAACTTCTTCAAATTTCTaGGTACACAGAGGGTACCTG +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSETSSNF*VHRGYL
Trigger: CAGGTACCCTCTGTGTACTCAGAAATTTGAAGAAGT...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR TCA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAACACGAATGTTCTCATaGATGTTACATAAAGCATCC +
Preference number: 2 (lower is better)
Translates to: FITSCSFLVDRKESCCGETRMFS*MLHKAS
Trigger: GGATGCTTTATGTAACATTCATGAGAACATTCGTGT...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGAGCATTCCTCACCATGTaGAGTACCTCATCATATTTT +
Preference number: 2 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGAFLTM*STSSYF
Trigger: AAAATATGATGAGGTACTGCACATGGTGAGGAATGC...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAATATAGACACATTCTCTaGGGGGAACATATGGTGACT +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSEYRHIL*GEHMVT
Trigger: AGTCACCATATGTTCCCCCCAGAGAATGTGTCTATA...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAAAGGCGCATGCTACCATaGCAGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: SIEEKKILGFRVQRARSERRMLP*QANFYI
Trigger: AATATAAAAATTAGCCTGGCATGGTAGCATGCGCCT...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp GTAAAGAACAAATCAATAACCCGCAGTGTGCATTTTGGAAAACCAAATAACTTCGAGATGATTAAGAGTTaGTGTGGCCTAGTCACACCA +
Preference number: 2 (lower is better)
Translates to: VKNKSITRSVHFGKPNNFEMIKS*CGLVTP
Trigger: TGGTGTGACTAGGCCACACCAACTCTTAATCATCTC...GAAGTTATTTGGTTTTCCAAAATGCACACTGCGGGTTATTGATTTGTTCTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AAATTTCTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAGAGATGATTAAGAGTTaGTGTGGCCTAGTCACACCA +
Preference number: 2 (lower is better)
Translates to: KFLSTQRVPALKFKCLRKEMIKS*CGLVTP
Trigger: TGGTGTGACTAGGCCACACCAACTCTTAATCATCTC...TTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAGAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CCA 90 bp AAATTTCTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAATATAGACACATTCTCTaGGGGGAACATATGGTGACT +
Preference number: 2 (lower is better)
Translates to: KFLSTQRVPALKFKCLRKYRHIL*GEHMVT
Trigger: AGTCACCATATGTTCCCCCCAGAGAATGTGTCTATA...TTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAGAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR GCA 90 bp AAATTTCTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAAGGCGCATGCTACCATaGCAGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: KFLSTQRVPALKFKCLRKRRMLP*QANFYI
Trigger: AATATAAAAATTAGCCTGGCATGGTAGCATGCGCCT...TTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAGAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGGTGGCTGGAGCAGCTaGGCATTAGGGTCAATGTCT +
Preference number: 3 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKGGWSS*ALGSMS
Trigger: AGACATTGACCCTAATGCCAAGCTGCTCCAGCCACC...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp ACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTaGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGTGG +
Preference number: 3 (lower is better)
Translates to: TGFFGSVGPPQA*ARVLVGAEQRW
Trigger: CCACCTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCGCAGAGCCTGATAGGTaGTGCGGCCTCGGGCGTATG +
Preference number: 3 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSAEPDR*CGLGRM
Trigger: CATACGCCCGAGGCCGCACAACCTATCAGGCTCTGC...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTAGGGCTGAGGATCAACTCTaGGCGAGGGTGGAAGACGGC +
Preference number: 3 (lower is better)
Translates to: AHSWYTILQPCILPVAIRAEDQL*ARVEDG
Trigger: GCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAGC...CCTAATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCGCAGAGCCTGATAGGTaGTGCGGCCTCGGGCGTATG +
Preference number: 3 (lower is better)
Translates to: ASVGFFSQADRIFRVCWAAEPDR*CGLGRM
Trigger: CATACGCCCGAGGCCGCACAACCTATCAGGCTCTGC...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR GCA 72 bp ACATGGAGGGTAGGCAGGGCAGAGCCTGATAGGTTGTaGGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCT +
Preference number: 3 (lower is better)
Translates to: TWRVGRAEPDRL*GLGRMSVGTVA
Trigger: AGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGGCTCTGCCCTGCCTACCCTCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCATCTCACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCCGGGGTGTTGCCATGTaGGCCAGGCAGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: AISQMRFCCSRVSLGSFFRGVAM*ARQVSN
Trigger: GTTCGAGACCTGCCTGGCCAACATGGCAACACCCCG...GAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTGAGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGGCGCCAGATCTTCACTaGACGATCATCTGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRAPDLH*TIICPR
Trigger: TCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCGC...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGTTGAATACTGGAAACTaGGAACCACTCCGCAACTGC +
Preference number: 3 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKLNTGN*EPLRNC
Trigger: GCAGTTGCGGAGTGGTTCCAAGTTTCCAGTATTCAA...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATCGGGGTGTTGCCATGTaGGCCAGGCAGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: SCSFLVDRKESCCGERRDRGVAM*ARQVSN
Trigger: GTTCGAGACCTGCCTGGCCAACATGGCAACACCCCG...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCATTAGAGACGGGGTGTaGCCATGTTGGCCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: ASVGFFSQADRIFRVCWAIRDGV*PCWPGR
Trigger: CCTGCCTGGCCAACATGGCAACACCCCGTCTCTAAT...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTAAGATCTCATCACAGTaGGGCACCTGTACCTTTTTG +
Preference number: 3 (lower is better)
Translates to: PQAWARVLVGAEQRWQLSKISSQ*GTCTFL
Trigger: CAAAAAGGTACAGGTGCCCAACTGTGATGAGATCTT...AGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp ACGCAGCACCAGGATCATGTGCACAGGCTGCAGGTTTaGGTGGGTGAAATAGGCTGCCATCTCACAGATGCG +
Preference number: 3 (lower is better)
Translates to: TQHQDHVHRLQV*VGEIGCHLTDA
Trigger: CGCATCTGTGAGATGGCAGCCTATTTCACCCACTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp AAACCGATTTCGAGCGACCCAAACGGCTGTCAGGCCTaGGGATCGTTTCCCTTCAGGCGCATCAGGATTCTG +
Preference number: 3 (lower is better)
Translates to: KPISSDPNGCQA*GSFPFRRIRIL
Trigger: CAGAATCCTGATGCGCCTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTTTGGGTCGCTCGAAATCGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATATTAGAGACGGGGTGTaGCCATGTTGGCCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDIRDGV*PCWPGR
Trigger: CCTGCCTGGCCAACATGGCAACACCCCGTCTCTAAT...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATAAGGAAGATATGTACTTaGGTGGGGTGCCTGCATGGG +
Preference number: 3 (lower is better)
Translates to: GPTEWTLFYWLSTVDGPIRKICT*VGCLHG
Trigger: CCCATGCAGGCACCCCACCAAAGTACATATCTTCCT...TATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CAA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGTCTAGGCAGTATACATaGTTGCCCTTCACCCGTGTG +
Preference number: 3 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRSRQYT*LPFTRV
Trigger: CACACGGGTGAAGGGCAACAATGTATACTGCCTAGA...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGGTGGCTGGAGCAGCTaGGCATTAGGGTCAATGTCT +
Preference number: 3 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQGGWSS*ALGSMS
Trigger: AGACATTGACCCTAATGCCAAGCTGCTCCAGCCACC...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATGGTGGCTGGAGCAGCTaGGCATTAGGGTCAATGTCT +
Preference number: 3 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDGGWSS*ALGSMS
Trigger: AGACATTGACCCTAATGCCAAGCTGCTCCAGCCACC...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACGCTCCTCCCTTCCCTTaGCTGGCAATGGTGCCTTCA +
Preference number: 3 (lower is better)
Translates to: VDTFLLAFHGRWADMMQHAPPFP*LAMVPS
Trigger: TGAAGGCACCATTGCCAGCAAAGGGAAGGGAGGAGC...GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCATCTCACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCGCTCCTCCCTTCCCTTaGCTGGCAATGGTGCCTTCA +
Preference number: 3 (lower is better)
Translates to: AISQMRFCCSRVSLGSFFAPPFP*LAMVPS
Trigger: TGAAGGCACCATTGCCAGCAAAGGGAAGGGAGGAGC...GAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTGAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCCCTTCTTCCTGTCCCTaGCCAAGAGCATCATCCCCC +
Preference number: 3 (lower is better)
Translates to: LDEVIKLQAHSWYTILQPPSSCP*PRASSP
Trigger: GGGGGATGATGCTCTTGGCAAGGGACAGGAAGAAGG...GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCGGCCTCTGCAATCTCTaGTTTATTGTCCACAACAAG +
Preference number: 3 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFGLCNL*FIVHNK
Trigger: CTTGTTGTGGACAATAAACAAGAGATTGCAGAGGCC...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp AATATCCCAAACGCGCACAGTCTGGTCCAGGCTGGCTaGTACTACCAAGTCTTCTGTGGGGTGGAACTGAGC +
Preference number: 3 (lower is better)
Translates to: NIPNAHSLVQAG*YYQVFCGVELS
Trigger: GCTCAGTTCCACCCCACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTGGGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CAA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCGGGGTGTTGCCATGTaGGCCAGGCAGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: KDGTEFFHSLLKFANCGERGVAM*ARQVSN
Trigger: GTTCGAGACCTGCCTGGCCAACATGGCAACACCCCG...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TGCGGTTACAGATCACAATGGCGTGTTTGGCTAGTAGTGCTACATGTGACATGTCGGGGTGTTGCCATGTaGGCCAGGCAGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: CGYRSQWRVWLVVLHVTCRGVAM*ARQVSN
Trigger: GTTCGAGACCTGCCTGGCCAACATGGCAACACCCCG...ACATGTCACATGTAGCACTACTAGCCAAACACGCCATTGTGATCTGTAACCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGAAACTTGGAACCACTCCGCAACTGCATCACAGCTACATCTTTGGAGCTGTTGATTAGAGACGGGGTGTaGCCATGTTGGCCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: GNLEPLRNCITATSLELLIRDGV*PCWPGR
Trigger: CCTGCCTGGCCAACATGGCAACACCCCGTCTCTAAT...CAACAGCTCCAAAGATGTAGCTGTGATGCAGTTGCGGAGTGGTTCCAAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATCTAGGCAGTATACATaGTTGCCCTTCACCCGTGTG +
Preference number: 3 (lower is better)
Translates to: GPTEWTLFYWLSTVDGPISRQYT*LPFTRV
Trigger: CACACGGGTGAAGGGCAACAATGTATACTGCCTAGA...TATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCCCCACGACTGGCCAACTAGTTaGGCATTCCTCACCATGTGC +
Preference number: 3 (lower is better)
Translates to: ELDLFPWLGAQRNHLQPHDWPTS*AFLTMC
Trigger: GCACATGGTGAGGAATGCCAAACTAGTTGGCCAGTC...GTGGGGCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTGTCATCCAGTGCTTaGGCTGCTTCCAGAGCAATC +
Preference number: 3 (lower is better)
Translates to: FRPTAGTPFFSPASFQLRLSSSA*AASRAI
Trigger: GATTGCTCTGGAAGCAGCCAAAGCACTGGATGACAA...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTAGGTTGTCATCCAGTGCTTaGGCTGCTTCCAGAGCAATC +
Preference number: 3 (lower is better)
Translates to: AHSWYTILQPCILPVAIRLSSSA*AASRAI
Trigger: GATTGCTCTGGAAGCAGCCAAAGCACTGGATGACAA...CCTAATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GAGCCTGATAGGTTGTGCGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCTTGTGGTCAATGTCTGGGATaGTCTCCTTCTCTGGGTCAA +
Preference number: 3 (lower is better)
Translates to: EPDRLCGLGRMSVGTVACGQCLG*SPSLGQ
Trigger: TTGACCCAGAGAAGGAGACAATCCCAGACATTGACC...ACAAGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTTGAAGTTCTTGAGCTaGAAGAACAGATTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFLKFLS*KNRLRA
Trigger: AGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAA...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp CCATCATGGCCTGCTGCAAAGAGGTTAAGGTTAGGGTaGGCAGCTAGGACCCAGAAACGATCATGGTCTCTG +
Preference number: 3 (lower is better)
Translates to: PSWPAAKRLRLG*AARTQKRSWSL
Trigger: CAGAGACCATGATCGTTTCTGGGTCCTAGCTGCTCACCCTAACCTTAACCTCTTTGCAGCAGGCCATGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp AGGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTaGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGG +
Preference number: 3 (lower is better)
Translates to: RPIGIQWHDRCR*LEQLGIRVNVW
Trigger: CCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp CCGTTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTaGTACACCATTCTTCAGCCCTGCATCCTTCCAGTT +
Preference number: 3 (lower is better)
Translates to: PLDEVIKLQAHS*YTILQPCILPV
Trigger: AACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp CAGAAATATCCCAAACGCGCACAGTCTGGTCCAGGCTaGCTGATACTACCAAGTCTTCTGTGGGGTGGAACT +
Preference number: 3 (lower is better)
Translates to: QKYPKRAQSGPG*LILPSLLWGGT
Trigger: AGTTCCACCCCACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTGGGATATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CAA 90 bp CATGCGCCAGATCTTCACTTGACGATCATCTGCCCCAGATACAATAAGGGGCATGCGCCAGATCTTCACTaGACGATCATCTGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: HAPDLHLTIICPRYNKGHAPDLH*TIICPR
Trigger: TCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCGC...ATGCCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGGCTGAGGATCAACTCTaGGCGAGGGTGGAAGACGGC +
Preference number: 3 (lower is better)
Translates to: ASAISCLLSTTRSGTLRRAEDQL*ARVEDG
Trigger: GCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAGC...CCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTTGAATACTGGAAACTaGGAACCACTCCGCAACTGC +
Preference number: 3 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSLNTGN*EPLRNC
Trigger: GCAGTTGCGGAGTGGTTCCAAGTTTCCAGTATTCAA...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCATCACAATGGCGTGTTaGGCTAGTAGTGCTACATGT +
Preference number: 3 (lower is better)
Translates to: ASGPQLVHHSSALHPSSCITMAC*ASSATC
Trigger: ACATGTAGCACTACTAGCCAAACACGCCATTGTGAT...GCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TGGTGGTTCCCCTGCAGCAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTTGCATAAAGCATCCAGTTaGCGGTTACAGATCACAATG +
Preference number: 3 (lower is better)
Translates to: WWFPCSRATSPSFSQQFLHKASS*RLQITM
Trigger: CATTGTGATCTGTAACCGCAAACTGGATGCTTTATG...CAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTGCTGCAGGGGAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGTGGTGACAGCATATTaGATGTGGTTGCTTGTGGTA +
Preference number: 3 (lower is better)
Translates to: ASGPQLVHHSSALHPSSCVVTAY*MWLLVV
Trigger: TACCACAAGCAACCACATCAAATATGCTGTCACCAC...GCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATTCTAGGCAGTATACATaGTTGCCCTTCACCCGTGTG +
Preference number: 3 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDSRQYT*LPFTRV
Trigger: CACACGGGTGAAGGGCAACAATGTATACTGCCTAGA...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCAAGGGCCAGCTTGAATTaGAACTCAGTGGGATCAATG +
Preference number: 3 (lower is better)
Translates to: GQLVSNGMIGAGGWSSLARASLN*NSVGSM
Trigger: CATTGATCCCACTGAGTTCAAATTCAAGCTGGCCCT...TGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTGATCAGGGCCAGCTaGAATTTGAACTCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: GQLVSNGMIGAGGWSSLALIRAS*NLNSVG
Trigger: TCCCACTGAGTTCAAATTCAAGCTGGCCCTGATCAA...TGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATTTGTCATCCAGTGCTTaGGCTGCTTCCAGAGCAATC +
Preference number: 3 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDLSSSA*AASRAI
Trigger: GATTGCTCTGGAAGCAGCCAAAGCACTGGATGACAA...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGGTCAATGTCTGGGATaGTCTCCTTCTCTGGGTCAA +
Preference number: 3 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQGQCLG*SPSLGQ
Trigger: TTGACCCAGAGAAGGAGACAATCCCAGACATTGACC...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGTGGCTGGAGCAGCTaGGCATTAGGGTCAATGTCT +
Preference number: 3 (lower is better)
Translates to: QLVSNGMIGAGGWSSLALGGWSS*ALGSMS
Trigger: AGACATTGACCCTAATGCCAAGCTGCTCCAGCCACC...TAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGGCTCCTCCCTTCCCTTaGCTGGCAATGGTGCCTTCA +
Preference number: 3 (lower is better)
Translates to: DGTEFFHSLLKFANCGELAPPFP*LAMVPS
Trigger: TGAAGGCACCATTGCCAGCAAAGGGAAGGGAGGAGC...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGCCTTCTTCCTGTCCCTaGCCAAGAGCATCATCCCCC +
Preference number: 3 (lower is better)
Translates to: DGTEFFHSLLKFANCGELPSSCP*PRASSP
Trigger: GGGGGATGATGCTCTTGGCAAGGGACAGGAAGAAGG...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCTGATAGGTTGTGCGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCTTGTAGGTACACCAGATCTGAGTaGGACTTGTTCCCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: PDRLCGLGRMSVGTVACRYTRSE*DLFPWL
Trigger: CAACCAAGGGAACAAGTCCAACTCAGATCTGGTGTA...CCTACAAGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATCTGGATTACCCCTACTaGGTCATGAAGGAGCCGCAT +
Preference number: 3 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDLDYPY*VMKEPH
Trigger: ATGCGGCTCCTTCATGACCAAGTAGGGGTAATCCAG...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGATGGAACGGAATGGGCCACCTCAGGCTaGGGCCCGAGTTCTAGTAGG +
Preference number: 3 (lower is better)
Translates to: LLFIVHNKKWHTEKDGTEWATSG*GPSSSR
Trigger: CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCA...TTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTCTTGTCATCCAGTGCTTTGGCTGCTTCCAGAGCAATCTCAATGTTTCCACACATTAGAGACGGGGTGTaGCCATGTTGGCCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: FLSSSALAASRAISMFPHIRDGV*PCWPGR
Trigger: CCTGCCTGGCCAACATGGCAACACCCCGTCTCTAAT...GTGTGGAAACATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCCCGCAGTGTGCATTTaGGAAAACCAAATAACTTCT +
Preference number: 3 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRPAVCI*ENQITS
Trigger: AGAAGTTATTTGGTTTTCCAAAATGCACACTGCGGG...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCACATCTTTGGAGCTGTaGAAATCCAGCTGTCGTAAG +
Preference number: 3 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSTSLEL*KSSCRK
Trigger: CTTACGACAGCTGGATTTCAACAGCTCCAAAGATGT...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAAAGGCAGTATACATTGTaGCCCTTCACCCGTGTGACA +
Preference number: 3 (lower is better)
Translates to: FHSLLKFANCGELVAQLQRQYTL*PFTRVT
Trigger: TGTCACACGGGTGAAGGGCAACAATGTATACTGCCT...TTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTTTGGTACGCTGATAGCACATTTCCACAATCTGGTGGTTCCCCTGCAGCAGGGTCTAGGCAGTATACATaGTTGCCCTTCACCCGTGTG +
Preference number: 3 (lower is better)
Translates to: FWYADSTFPQSGGSPAAGSRQYT*LPFTRV
Trigger: CACACGGGTGAAGGGCAACAATGTATACTGCCTAGA...CCCTGCTGCAGGGGAACCACCAGATTGTGGAAATGTGCTATCAGCGTACCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATAGGGCCAGCTTGAATTaGAACTCAGTGGGATCAATG +
Preference number: 3 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDRASLN*NSVGSM
Trigger: CATTGATCCCACTGAGTTCAAATTCAAGCTGGCCCT...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTAGGCGAGTTTTCTCATCCTaGACAAAATGCAGTGCCACT +
Preference number: 3 (lower is better)
Translates to: AHSWYTILQPCILPVAIRRVFSS*TKCSAT
Trigger: AGTGGCACTGCATTTTGTCAAGGATGAGAAAACTCG...CCTAATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCATCTCACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCGTTGGACTTGTTCCCTaGGTTGGGGGCACAAAGAAA +
Preference number: 3 (lower is better)
Translates to: AISQMRFCCSRVSLGSFFVGLVP*VGGTKK
Trigger: TTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAAC...GAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTGAGATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGAGCTTGAAGAACAGATaGAGGGCTGTACGCAGCACC +
Preference number: 3 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVSLKNR*RAVRST
Trigger: GGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCT...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp TATCCCAGACTCGAATACTCTTGTCCTCAGAATTGCTaGGGATCAACTCTTGGCGAGGGTGGAAGACGGCAC +
Preference number: 3 (lower is better)
Translates to: YPRLEYSCPQNC*GSTLGEGGRRH
Trigger: GTGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAGCAATTCTGAGGACAAGAGTATTCGAGTCTGGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp ATTACACCAGATCTGAGTTGGACTTGTTCCCTTGGTTaGGGGCACAAAGAAACCATCTTCAGCCCCACCAGC +
Preference number: 3 (lower is better)
Translates to: ITPDLSWTCSLG*GHKETIFSPTS
Trigger: GCTGGTGGGGCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATCTGGTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp ACTGGATTACCCCTACTTGGTCATGAAGGAGCCGCATaGCTGTTTCGAAAGAGCCTGCCAGGATGTGATCAA +
Preference number: 3 (lower is better)
Translates to: TGLPLLGHEGAA*LFRKSLPGCDQ
Trigger: TTGATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAGTAGGGGTAATCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp TTCCTCAGACCAGAAATATCCCAAACGCGCACAGTCTaGTCCAGGCTGGCTGATACTACCAAGTCTTCTGTG +
Preference number: 3 (lower is better)
Translates to: FLRPEISQTRTV*SRLADTTKSSV
Trigger: CACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTGGGATATTTCTGGTCTGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CAA 90 bp CTCCCCAGCCCTCTGTACCAACAGTGTCAATGTCAATGTCAGCAGCCAGTGCTCCAGAGGGTACCTGCCTaGAAATTTAAATGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: LPSPLYQQCQCQCQQPVLQRVPA*KFKCLR
Trigger: CCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTG...GAGCACTGGCTGCTGACATTGACATTGACACTGTTGGTACAGAGGGCTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCTGTACGCAGCACCAGGATCATGTGCACAGGCTGCAGGTTTGAGTGGGTGAAACCCGCAGTGTGCATTTaGGAAAACCAAATAACTTCT +
Preference number: 3 (lower is better)
Translates to: AVRSTRIMCTGCRFEWVKPAVCI*ENQITS
Trigger: AGAAGTTATTTGGTTTTCCAAAATGCACACTGCGGG...TTTCACCCACTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCTGCGTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCAATCTCAATGTTTCCACACTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCGCGCCAGATCTTCACTaGACGATCATCTGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: AISMFPHSSARLKRVFSSAPDLH*TIICPR
Trigger: TCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCGC...GGATGAGAAAACTCGCTTTAGTCTGGCACTGGAGTGTGGAAACATTGAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCATCACAGCTACATCTTaGGAGCTGTTGAAATCCAGC +
Preference number: 3 (lower is better)
Translates to: SVGFFSQADRIFRVCWATITATS*ELLKSS
Trigger: GCTGGATTTCAACAGCTCCAAAGATGTAGCTGTGAT...GGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCAAGATCTCATCACAGTaGGGCACCTGTACCTTTTTG +
Preference number: 3 (lower is better)
Translates to: ASVGFFSQADRIFRVCWAKISSQ*GTCTFL
Trigger: CAAAAAGGTACAGGTGCCCAACTGTGATGAGATCTT...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AGGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCCATAAAGCATCCAGTTaGCGGTTACAGATCACAATG +
Preference number: 3 (lower is better)
Translates to: RPIGIQWHDRCRWLEQLGHKASS*RLQITM
Trigger: CATTGTGATCTGTAACCGCAAACTGGATGCTTTATG...GCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTTTGATCAGGGCCAGCTaGAATTTGAACTCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: WMRSLSFRPTAGTPFFSPLIRAS*NLNSVG
Trigger: TCCCACTGAGTTCAAATTCAAGCTGGCCCTGATCAA...AGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGGGTCAATGTCTGGGATaGTCTCCTTCTCTGGGTCAA +
Preference number: 3 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVGQCLG*SPSLGQ
Trigger: TTGACCCAGAGAAGGAGACAATCCCAGACATTGACC...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGGGTGGCTGGAGCAGCTaGGCATTAGGGTCAATGTCT +
Preference number: 3 (lower is better)
Translates to: KDGTEFFHSLLKFANCGEGGWSS*ALGSMS
Trigger: AGACATTGACCCTAATGCCAAGCTGCTCCAGCCACC...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGGTCAATAAAGGCCAATaGGTATCCAATGGCATGATA +
Preference number: 3 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRVNKGQ*VSNGMI
Trigger: TATCATGCCATTGGATACCAATTGGCCTTTATTGAC...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGACAGCCTCCTCAAATTaGCCAACTGTGGTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: DGTEFFHSLLKFANCGELTASSN*PTVVSW
Trigger: CCAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGT...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR GCA 72 bp GTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTaGCAGGATGTGATCAACTGGAAGCTGAGAGTTATT +
Preference number: 3 (lower is better)
Translates to: VMKEPHGCFERA*QDVINWKLRVI
Trigger: AATAACTCTCAGCTTCCAGTTGATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp CAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTaGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATT +
Preference number: 3 (lower is better)
Translates to: QLVSNGMIGAGG*SSLALGSMSGI
Trigger: AATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp TCTGGTCCAGGCTGGCTGATACTACCAAGTCTTCTGTaGGGTGGAACTGAGCACACATCACATAATGGTTGT +
Preference number: 3 (lower is better)
Translates to: SGPGWLILPSLL*GGTEHTSHNGC
Trigger: ACAACCATTATGTGATGTGTGCTCAGTTCCACCCCACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CAA 90 bp CCCTTGCCAAGAGCATCATCCCCCAAACCTTCTGTAGCCTCCACAAACCCATCTCAGAGGGTACCTGCCTaGAAATTTAAATGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: PLPRASSPKPSVASTNPSQRVPA*KFKCLR
Trigger: CCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTG...AGATGGGTTTGTGGAGGCTACAGAAGGTTTGGGGGATGATGCTCTTGGCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTGCCACCAACCTCCCATGCCTTaGATTCATTCATGCGCCAGA +
Preference number: 3 (lower is better)
Translates to: LQCQTKASFLILDKMQCHQPPMP*IHSCAR
Trigger: TCTGGCGCATGAATGAATCAAAGGCATGGGAGGTTG...GTGGCACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGAACCACTCCGCAACTGCATCACAGCTACATCTTTGGAGCTGTTGAAATCCAGCAGACTCGAATACTCTaGTCCTCAGAATTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: GTTPQLHHSYIFGAVEIQQTRIL*SSELLR
Trigger: CCTCAGCAATTCTGAGGACAAGAGTATTCGAGTCTG...CTGGATTTCAACAGCTCCAAAGATGTAGCTGTGATGCAGTTGCGGAGTGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CATGCGCCAGATCTTCACTTGACGATCATCTGCCCCAGATACAATAAGGGGCATCAGACTCGAATACTCTaGTCCTCAGAATTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: HAPDLHLTIICPRYNKGHQTRIL*SSELLR
Trigger: CCTCAGCAATTCTGAGGACAAGAGTATTCGAGTCTG...ATGCCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGTAGGCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTTTGAATACTGGAAACTaGGAACCACTCCGCAACTGC +
Preference number: 3 (lower is better)
Translates to: GRHLWDSSHRQTGFFGSVLNTGN*EPLRNC
Trigger: GCAGTTGCGGAGTGGTTCCAAGTTTCCAGTATTCAA...AACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGCCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCCCCACCAGCTGTACTATTCTCTAGATaGCTAGCTCTTGTACAAAGC +
Preference number: 3 (lower is better)
Translates to: GLVPLVGGTKKPSSAPPAVLFSR*LALVQS
Trigger: GCTTTGTACAAGAGCTAGCAATCTAGAGAATAGTAC...AGCTGGTGGGGCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTGGCACCTGTACCTTTTaGGTGATCTCATTCTTCAGA +
Preference number: 3 (lower is better)
Translates to: PIGIQWHDRCRWLEQLGIGTCTF*VISFFR
Trigger: TCTGAAGAATGAGATCACCAAAAAGGTACAGGTGCC...AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTTTGGTACGCTGATAGCACATTTCCACAATCTGGTGGTTCCCCTGCAGCAGGGAAGATCTCATCACAGTaGGGCACCTGTACCTTTTTG +
Preference number: 3 (lower is better)
Translates to: FWYADSTFPQSGGSPAAGKISSQ*GTCTFL
Trigger: CAAAAAGGTACAGGTGCCCAACTGTGATGAGATCTT...CCCTGCTGCAGGGGAACCACCAGATTGTGGAAATGTGCTATCAGCGTACCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTGTGGTGACAGCATATTaGATGTGGTTGCTTGTGGTA +
Preference number: 3 (lower is better)
Translates to: PIGIQWHDRCRWLEQLGIVVTAY*MWLLVV
Trigger: TACCACAAGCAACCACATCAAATATGCTGTCACCAC...AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCCTTTCTGTCTAGGCAGTATACATTGTaGCCCTTCACCCGTGTGACA +
Preference number: 3 (lower is better)
Translates to: RCASAVLESLWAASSFLSRQYTL*PFTRVT
Trigger: TGTCACACGGGTGAAGGGCAACAATGTATACTGCCT...AGACAGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCCCCACCAGCTTCATCATATTTTCTGTaGATCAGGGCCAGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: GLVPLVGGTKKPSSAPPASSYFL*IRASLN
Trigger: ATTCAAGCTGGCCCTGATCAACAGAAAATATGATGA...AGCTGGTGGGGCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CTGATAGTGGCCACTCATGTCCTTTCTGATCTCAGCAATCTTCATCATCTTGCGGACTGGCCAACTAGTTaGGCATTCCTCACCATGTGC +
Preference number: 3 (lower is better)
Translates to: LIVATHVLSDLSNLHHLADWPTS*AFLTMC
Trigger: GCACATGGTGAGGAATGCCAAACTAGTTGGCCAGTC...CGCAAGATGATGAAGATTGCTGAGATCAGAAAGGACATGAGTGGCCACTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGGACTGGCCAACTAGTTaGGCATTCCTCACCATGTGC +
Preference number: 3 (lower is better)
Translates to: ASAISCLLSTTRSGTLRRDWPTS*AFLTMC
Trigger: GCACATGGTGAGGAATGCCAAACTAGTTGGCCAGTC...CCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTCGAGTTTTCTCATCCTaGACAAAATGCAGTGCCACT +
Preference number: 3 (lower is better)
Translates to: PIGIQWHDRCRWLEQLGIRVFSS*TKCSAT
Trigger: AGTGGCACTGCATTTTGTCAAGGATGAGAAAACTCG...AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGCCTCTGCAATCTCTaGTTTATTGTCCACAACAAG +
Preference number: 3 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDGLCNL*FIVHNK
Trigger: CTTGTTGTGGACAATAAACAAGAGATTGCAGAGGCC...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACTGTTCTAGAGTCTCTTaGGGCAGCTTCTTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: VDTFLLAFHGRWADMMQHCSRVS*GSFFLS
Trigger: AGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAACA...GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp CTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATaGTGCAGCACAAATGTCAAAGGGGTTGTGCATGTC +
Preference number: 3 (lower is better)
Translates to: LFYWLSTVDGPI*CSTNVKGVVHV
Trigger: GACATGCACAACCCCTTTGACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp GCACACAAAGGGGGCCTTAGCGAAACTGCAGAGGACTaGTCCTTAAACCAATCACATCTTTGCCAATCTCTG +
Preference number: 3 (lower is better)
Translates to: AHKGGLSETAED*SLNQSHLCQSL
Trigger: CAGAGATTGGCAAAGATGTGATTGGTTTAAGGATCAGTCCTCTGCAGTTTCGCTAAGGCCCCCTTTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR GCA 72 bp TTCATTCATGCGCCAGATCTTCACTTGACGATCATCTaGCCCAGATACAATAAGGGGCATAGTGGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: FIHAPDLHLTII*PRYNKGHSGVE
Trigger: TTCCACCCCACTATGCCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCGCATGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR GCA 72 bp TTCTCCCAGCTTTTCCCAGCAGTTCTTGTCATCCAGTaGTTTGGCTGCTTCCAGAGCAATCTCAATGTTTCC +
Preference number: 3 (lower is better)
Translates to: FSQLFPAVLVIQ*FGCFQSNLNVS
Trigger: GGAAACATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAACTGCTGGGAAAAGCTGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp GGCTGTTTCGAAAGAGCCTGCCAGGATGTGATCAACTaGAAGCTGAGAGTTATTACACCAGATCTGAGTTGG +
Preference number: 3 (lower is better)
Translates to: GCFERACQDVIN*KLRVITPDLSW
Trigger: CCAACTCAGATCTGGTGTAATAACTCTCAGCTTCCAGTTGATCACATCCTGGCAGGCTCTTTCGAAACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GAGATGATTAAGAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCGGGGTGTTGCCATGTaGGCCAGGCAGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: EMIKSWCGLVTPKCIYYIRGVAM*ARQVSN
Trigger: GTTCGAGACCTGCCTGGCCAACATGGCAACACCCCG...GATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTCTTAATCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCCAGAGGGTACCTGCCTaGAAATTTAAATGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: LDEVIKLQAHSWYTILQPQRVPA*KFKCLR
Trigger: CCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTG...GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTCTGTCCACAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCAGGTATCCCGCAGTGTGCATTTaGGAAAACCAAATAACTTCT +
Preference number: 3 (lower is better)
Translates to: FCPQFFRIRTRSDTSPRYPAVCI*ENQITS
Trigger: AGAAGTTATTTGGTTTTCCAAAATGCACACTGCGGG...ATACCTGGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTGTGGACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAACCGTTGGATGAGGTCATTCCCGCAGTGTGCATTTaGGAAAACCAAATAACTTCT +
Preference number: 3 (lower is better)
Translates to: FANCGELVAQLQPLDEVIPAVCI*ENQITS
Trigger: AGAAGTTATTTGGTTTTCCAAAATGCACACTGCGGG...AATGACCTCATCCAACGGTTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GAGAAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTCAACCTCCCATGCCTTaGATTCATTCATGCGCCAGA +
Preference number: 3 (lower is better)
Translates to: EKDGTEFFHSLLKFANCGQPPMP*IHSCAR
Trigger: TCTGGCGCATGAATGAATCAAAGGCATGGGAGGTTG...ACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAAGCTGAGGATCAACTCTaGGCGAGGGTGGAAGACGGC +
Preference number: 3 (lower is better)
Translates to: SIEEKKILGFRVQRARSEAEDQL*ARVEDG
Trigger: GCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAGC...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCTTGAAGAACAGATTGAGGGCTCTCTTGTCCTCAGAATaGCTGAGGATCAACTCTTGG +
Preference number: 3 (lower is better)
Translates to: AKVAAVLKFLSLKNRLRALLSSE*LRINSW
Trigger: CCAAGAGTTGATCCTCAGCAATTCTGAGGACAAGAG...AGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCTTTCTGTCTCCACGGACAAACCCACAATGTACTCACGGCAAATGGTGATGAGATCACAGCTACATCTTaGGAGCTGTTGAAATCCAGC +
Preference number: 3 (lower is better)
Translates to: PFCLHGQTHNVLTANGDEITATS*ELLKSS
Trigger: GCTGGATTTCAACAGCTCCAAAGATGTAGCTGTGAT...CTCATCACCATTTGCCGTGAGTACATTGTGGGTTTGTCCGTGGAGACAGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CACAGATGCGCTTCTGCTGTTCTAGAGTCTCTTTGGGCAGCTTCTTCCTTTCTGGGCACCTGTACCTTTTaGGTGATCTCATTCTTCAGA +
Preference number: 3 (lower is better)
Translates to: HRCASAVLESLWAASSFLGTCTF*VISFFR
Trigger: TCTGAAGAATGAGATCACCAAAAAGGTACAGGTGCC...CAGAAAGGAAGAAGCTGCCCAAAGAGACTCTAGAACAGCAGAAGCGCATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp ATCCAGTGCTTTGGCTGCTTCCAGAGCAATCTCAATGTTTCCACACTCCAGTGCAAGATCTCATCACAGTaGGGCACCTGTACCTTTTTG +
Preference number: 3 (lower is better)
Translates to: IQCFGCFQSNLNVSTLQCKISSQ*GTCTFL
Trigger: CAAAAAGGTACAGGTGCCCAACTGTGATGAGATCTT...GCACTGGAGTGTGGAAACATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCTTTCTGTCTCCACGGACAAACCCACAATGTACTCACGGCAAATGGTGATGAGATCACAATGGCGTGTTaGGCTAGTAGTGCTACATGT +
Preference number: 3 (lower is better)
Translates to: PFCLHGQTHNVLTANGDEITMAC*ASSATC
Trigger: ACATGTAGCACTACTAGCCAAACACGCCATTGTGAT...CTCATCACCATTTGCCGTGAGTACATTGTGGGTTTGTCCGTGGAGACAGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCTGCTTCCAGAGCAATCTCAATGTTTCCACACTCCAGTGCCAGACTAAAGCGAGTGGTGACAGCATATTaGATGTGGTTGCTTGTGGTA +
Preference number: 3 (lower is better)
Translates to: AASRAISMFPHSSARLKRVVTAY*MWLLVV
Trigger: TACCACAAGCAACCACATCAAATATGCTGTCACCAC...TCGCTTTAGTCTGGCACTGGAGTGTGGAAACATTGAGATTGCTCTGGAAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGAGGCAGTATACATTGTaGCCCTTCACCCGTGTGACA +
Preference number: 3 (lower is better)
Translates to: ASAISCLLSTTRSGTLRRRQYTL*PFTRVT
Trigger: TGTCACACGGGTGAAGGGCAACAATGTATACTGCCT...CCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGCTGAGGGCCAGCTTGAATTaGAACTCAGTGGGATCAATG +
Preference number: 3 (lower is better)
Translates to: DGTEFFHSLLKFANCGELRASLN*NSVGSM
Trigger: CATTGATCCCACTGAGTTCAAATTCAAGCTGGCCCT...CAGCTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGTCATCATATTTTCTGTaGATCAGGGCCAGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQSSYFL*IRASLN
Trigger: ATTCAAGCTGGCCCTGATCAACAGAAAATATGATGA...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AGAGGACTGATCCTTAAACCAATCACATCTTTGCCAATCTCTGTCACTGTGGTGGACTGGCCAACTAGTTaGGCATTCCTCACCATGTGC +
Preference number: 3 (lower is better)
Translates to: RGLILKPITSLPISVTVVDWPTS*AFLTMC
Trigger: GCACATGGTGAGGAATGCCAAACTAGTTGGCCAGTC...CACCACAGTGACAGAGATTGGCAAAGATGTGATTGGTTTAAGGATCAGTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATCGAGTTTTCTCATCCTaGACAAAATGCAGTGCCACT +
Preference number: 3 (lower is better)
Translates to: SCSFLVDRKESCCGERRDRVFSS*TKCSAT
Trigger: AGTGGCACTGCATTTTGTCAAGGATGAGAAAACTCG...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGGGTCAATGTCTGGGATaGTCTCCTTCTCTGGGTCAA +
Preference number: 3 (lower is better)
Translates to: ASAISCLLSTTRSGTLRRGQCLG*SPSLGQ
Trigger: TTGACCCAGAGAAGGAGACAATCCCAGACATTGACC...CCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCGTCAATAAAGGCCAATaGGTATCCAATGGCATGATA +
Preference number: 3 (lower is better)
Translates to: ASVGFFSQADRIFRVCWAVNKGQ*VSNGMI
Trigger: TATCATGCCATTGGATACCAATTGGCCTTTATTGAC...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp ACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACAAATGTGCACAGCTGCAACCGTaGGATGAGGTCATTAAGCTT +
Preference number: 3 (lower is better)
Translates to: TFLLAFHGRWADMMQHKCAQLQP*DEVIKL
Trigger: AAGCTTAATGACCTCATCCAACGGTTGCAGCTGTGC...ACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGGCACAGCTGCAACCGTaGGATGAGGTCATTAAGCTT +
Preference number: 3 (lower is better)
Translates to: KDGTEFFHSLLKFANCGEAQLQP*DEVIKL
Trigger: AAGCTTAATGACCTCATCCAACGGTTGCAGCTGTGC...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCCTTCTTCCTGTCCCTTGCCAAGAGCATCATCCCCCAAACCTTCTGTAGCCTCTCATTCTTCAGATTCTaGATCAGAAGCGAATGCATC +
Preference number: 3 (lower is better)
Translates to: SFFLSLAKSIIPQTFCSLSFFRF*IRSECI
Trigger: GATGCATTCGCTTCTGATCAAGAATCTGAAGAATGA...GAGGCTACAGAAGGTTTGGGGGATGATGCTCTTGGCAAGGGACAGGAAGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCCATAGAAGAGAAAAAGATACTAGGTTTTAGGGTACAGAGAGCCAGATCTGAAATTAGAGACGGGGTGTaGCCATGTTGGCCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: SIEEKKILGFRVQRARSEIRDGV*PCWPGR
Trigger: CCTGCCTGGCCAACATGGCAACACCCCGTCTCTAAT...TTCAGATCTGGCTCTCTGTACCCTAAAACCTAGTATCTTTTTCTCTTCTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATCAGAGGGTACCTGCCTaGAAATTTAAATGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: SCSFLVDRKESCCGERRDQRVPA*KFKCLR
Trigger: CCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTG...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GTACTTTGGTGGGGTGCCTGCATGGGTGAACAAGAACATGAGAGTGTCCAAGAACCCGCAGTGTGCATTTaGGAAAACCAAATAACTTCT +
Preference number: 3 (lower is better)
Translates to: VLWWGACMGEQEHESVQEPAVCI*ENQITS
Trigger: AGAAGTTATTTGGTTTTCCAAAATGCACACTGCGGG...TTCTTGGACACTCTCATGTTCTTGTTCACCCATGCAGGCACCCCACCAAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241704.8
ENST00000649676.1
ENST00000649963.1
3UTR-3UTR CAA 90 bp CCAGCAGTTCTTGTCATCCAGTGCTTTGGCTGCTTCCAGAGCAATCTCAATGTTATCACAGCTACATCTTaGGAGCTGTTGAAATCCAGC +
Preference number: 3 (lower is better)
Translates to: PAVLVIQCFGCFQSNLNVITATS*ELLKSS
Trigger: GCTGGATTTCAACAGCTCCAAAGATGTAGCTGTGAT...AACATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAACTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp ACCAGATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTATCACAATGGCGTGTTaGGCTAGTAGTGCTACATGT +
Preference number: 3 (lower is better)
Translates to: TRSELDLFPWLGAQRNHLITMAC*ASSATC
Trigger: ACATGTAGCACTACTAGCCAAACACGCCATTGTGAT...AAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCACACTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTAGGGCCAGCTTGAATTaGAACTCAGTGGGATCAATG +
Preference number: 3 (lower is better)
Translates to: PHSSARLKRVFSSLTKCSRASLN*NSVGSM
Trigger: CATTGATCCCACTGAGTTCAAATTCAAGCTGGCCCT...ACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGTTGATCAGGGCCAGCTaGAATTTGAACTCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: KDGTEFFHSLLKFANCGELIRAS*NLNSVG
Trigger: TCCCACTGAGTTCAAATTCAAGCTGGCCCTGATCAA...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTACAGGAAGGAAAGTTaGTCAAAGTTTTTGGTACGC +
Preference number: 3 (lower is better)
Translates to: LDEVIKLQAHSWYTILQPYRKES*SKFLVR
Trigger: GCGTACCAAAAACTTTGACAAACTTTCCTTCCTGTA...GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGTACACCAGATCTGAGTaGGACTTGTTCCCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: KDGTEFFHSLLKFANCGEYTRSE*DLFPWL
Trigger: CAACCAAGGGAACAAGTCCAACTCAGATCTGGTGTA...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAAGGAGGGATGCAATCTCTTGTTTATaGTCCACAACAAGAAGTGGC +
Preference number: 3 (lower is better)
Translates to: SCSFLVDRKESCCGERRDAISCL*STTRSG
Trigger: GCCACTTCTTGTTGTGGACAATAAACAAGAGATTGC...ATCCCTCCTTTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp ACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACAAATGTAAGGTGGCAGCTGTCTaGAAGTTCTTGAGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: TFLLAFHGRWADMMQHKCKVAAV*KFLSLK
Trigger: CTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTT...ACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAACCGTTGGATGAGGTCATTTCATTCTTCAGATTCTaGATCAGAAGCGAATGCATC +
Preference number: 3 (lower is better)
Translates to: FANCGELVAQLQPLDEVISFFRF*IRSECI
Trigger: GATGCATTCGCTTCTGATCAAGAATCTGAAGAATGA...AATGACCTCATCCAACGGTTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR CCA 72 bp AAGGTGCTGTTAGAAGGAGGATATAGACACATTCTCTaGGGGGAACATATGGTGACTGACCCATGCACACAA +
Preference number: 3 (lower is better)
Translates to: KVLLEGGYRHIL*GEHMVTDPCTQ
Trigger: TTGTGTGCATGGGTCAGTCACCATATGTTCCCCCCAGAGAATGTGTCTATATCCTCCTTCTAACAGCACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCAAATGTCTCCTTTAGGCTCTCAGCTTCTTCATCTAAGCCATGGGTAGCAGCTACATCTTTGGAGCTGTaGAAATCCAGCTGTCGTAAG +
Preference number: 3 (lower is better)
Translates to: SNVSFRLSASSSKPWVAATSLEL*KSSCRK
Trigger: CTTACGACAGCTGGATTTCAACAGCTCCAAAGATGT...AGCTGCTACCCATGGCTTAGATGAAGAAGCTGAGAGCCTAAAGGAGACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCACACTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTGACAAAATGCAGTGTGGTGACAGCATATTaGATGTGGTTGCTTGTGGTA +
Preference number: 3 (lower is better)
Translates to: PHSSARLKRVFSSLTKCSVVTAY*MWLLVV
Trigger: TACCACAAGCAACCACATCAAATATGCTGTCACCAC...ACTGCATTTTGTCAAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCATGTGTACAGGAAGGAAAGTTaGTCAAAGTTTTTGGTACGC +
Preference number: 3 (lower is better)
Translates to: VLELEEQIEGCTQHQDHVYRKES*SKFLVR
Trigger: GCGTACCAAAAACTTTGACAAACTTTCCTTCCTGTA...CACATGATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCTCATTCTTCAGATTCTaGATCAGAAGCGAATGCATC +
Preference number: 3 (lower is better)
Translates to: DLSWTCSLGWGHKETIFSSFFRF*IRSECI
Trigger: GATGCATTCGCTTCTGATCAAGAATCTGAAGAATGA...GCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp CATGCCTTTGATTCATTCATGCGCCAGATCTTCACTTaGCGATCATCTGCCCCAGATACAATAAGGGGCATA +
Preference number: 3 (lower is better)
Translates to: HAFDSFMRQIFT*RSSAPDTIRGI
Trigger: TATGCCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCGCATGAATGAATCAAAGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp TCATCCCAGGCCCCACTCTTGACACGAATGTTCTCATaGATGTTACATAAAGCATCCAGTTTGCGGTTACAG +
Preference number: 3 (lower is better)
Translates to: SSQAPLLTRMFS*MLHKASSLRLQ
Trigger: CTGTAACCGCAAACTGGATGCTTTATGTAACATTCATGAGAACATTCGTGTCAAGAGTGGGGCCTGGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR GCA 72 bp TTACTGGAAGGAAGATATGTACTTTGGTGGGGTGCCTaGATGGGTGAACAAGAACATGAGAGTGTCCAAGAA +
Preference number: 3 (lower is better)
Translates to: LLEGRYVLWWGA*MGEQEHESVQE
Trigger: TTCTTGGACACTCTCATGTTCTTGTTCACCCATGCAGGCACCCCACCAAAGTACATATCTTCCTTCCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241704.8
ENST00000649963.1
3UTR-3UTR CAA 90 bp AAATTTCTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATTAGAGACGGGGTGTaGCCATGTTGGCCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: KFLSTQRVPALKFKCLRKIRDGV*PCWPGR
Trigger: CCTGCCTGGCCAACATGGCAACACCCCGTCTCTAAT...TTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp ACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACAAATGTCAGAGGGTACCTGCCTaGAAATTTAAATGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: TFLLAFHGRWADMMQHKCQRVPA*KFKCLR
Trigger: CCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTG...ACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AATCTCAATGTTTCCACACTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTCTCTTGTCCTCAGAATaGCTGAGGATCAACTCTTGG +
Preference number: 3 (lower is better)
Translates to: NLNVSTLQCQTKASFLILLLSSE*LRINSW
Trigger: CCAAGAGTTGATCCTCAGCAATTCTGAGGACAAGAG...AAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAGTGTGGAAACATTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAACAGACTCGAATACTCTaGTCCTCAGAATTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: FITSCSFLVDRKESCCGEQTRIL*SSELLR
Trigger: CCTCAGCAATTCTGAGGACAAGAGTATTCGAGTCTG...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp ACCAGATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTTCATCATATTTTCTGTaGATCAGGGCCAGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: TRSELDLFPWLGAQRNHLSSYFL*IRASLN
Trigger: ATTCAAGCTGGCCCTGATCAACAGAAAATATGATGA...AAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CCTTTCTGTCTCCACGGACAAACCCACAATGTACTCACGGCAAATGGTGATGAGGCAATCTTCATCATCTaGCGAAGTTTTTCTAAGTTG +
Preference number: 3 (lower is better)
Translates to: PFCLHGQTHNVLTANGDEAIFII*RSFSKL
Trigger: CAACTTAGAAAAACTTCGCAAGATGATGAAGATTGC...CTCATCACCATTTGCCGTGAGTACATTGTGGGTTTGTCCGTGGAGACAGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGATGGAACGGAATTTGTTGGACTTGTTCCCTaGGTTGGGGGCACAAAGAAA +
Preference number: 3 (lower is better)
Translates to: LFIVHNKKWHTEKDGTEFVGLVP*VGGTKK
Trigger: TTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAAC...AAATTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AATCTCAATGTTTCCACACTCCAGTGCCAGACTAAAGCGAGTTTTCTCATCCTTAACACAGGTTCTAGATaGCCAGTTCCACACTCGGAT +
Preference number: 3 (lower is better)
Translates to: NLNVSTLQCQTKASFLILNTGSR*PVPHSD
Trigger: ATCCGAGTGTGGAACTGGCAATCTAGAACCTGTGTT...AAGGATGAGAAAACTCGCTTTAGTCTGGCACTGGAGTGTGGAAACATTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR TCA 72 bp GCAGGACTGCATTTTCTGCTGGATTGTATGACATATTaGATACTGGAAACTTGGAACCACTCCGCAACTGCA +
Preference number: 3 (lower is better)
Translates to: AGLHFLLDCMTY*ILETWNHSATA
Trigger: TGCAGTTGCGGAGTGGTTCCAAGTTTCCAGTATTCAATATGTCATACAATCCAGCAGAAAATGCAGTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp TCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTaGGAAGGATGGAACGGAATTTTTCCACAGCCTCCT +
Preference number: 3 (lower is better)
Translates to: SLVYCPQQEVAH*EGWNGIFPQPP
Trigger: AGGAGGCTGTGGAAAAATTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTTATTACATCCTGCTCCTTTCTAGTTGACAGGAAAGAAAGCTGCTGTGGGGAAATCACAATGGCGTGTTaGGCTAGTAGTGCTACATGT +
Preference number: 3 (lower is better)
Translates to: FITSCSFLVDRKESCCGEITMAC*ASSATC
Trigger: ACATGTAGCACTACTAGCCAAACACGCCATTGTGAT...TTCCCCACAGCAGCTTTCTTTCCTGTCAACTAGAAAGGAGCAGGATGTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CTGATAGTGGCCACTCATGTCCTTTCTGATCTCAGCAATCTTCATCATCTTGCGTCATCATATTTTCTGTaGATCAGGGCCAGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: LIVATHVLSDLSNLHHLASSYFL*IRASLN
Trigger: ATTCAAGCTGGCCCTGATCAACAGAAAATATGATGA...CGCAAGATGATGAAGATTGCTGAGATCAGAAAGGACATGAGTGGCCACTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GCCTCTGCAATCTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGTACAGGAAGGAAAGTTaGTCAAAGTTTTTGGTACGC +
Preference number: 3 (lower is better)
Translates to: ASAISCLLSTTRSGTLRRYRKES*SKFLVR
Trigger: GCGTACCAAAAACTTTGACAAACTTTCCTTCCTGTA...CCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAGATTGCAGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp AAGGATGGAACGGAATTTTTCCACAGCCTCCTCAAATTTGCCAACTGTGGTGAGGTCAATAAAGGCCAATaGGTATCCAATGGCATGATA +
Preference number: 3 (lower is better)
Translates to: KDGTEFFHSLLKFANCGEVNKGQ*VSNGMI
Trigger: TATCATGCCATTGGATACCAATTGGCCTTTATTGAC...CTCACCACAGTTGGCAAATTTGAGGAGGCTGTGGAAAAATTCCGTTCCATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCCAGAGGGTACCTGCCTaGAAATTTAAATGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFQRVPA*KFKCLR
Trigger: CCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTG...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCCCCGCAGTGTGCATTTaGGAAAACCAAATAACTTCT +
Preference number: 3 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFPAVCI*ENQITS
Trigger: AGAAGTTATTTGGTTTTCCAAAATGCACACTGCGGG...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CTCTTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGATGGAACGGAAGTACTATTCTCTAGATaGCTAGCTCTTGTACAAAGC +
Preference number: 3 (lower is better)
Translates to: LLFIVHNKKWHTEKDGTEVLFSR*LALVQS
Trigger: GCTTTGTACAAGAGCTAGCAATCTAGAGAATAGTAC...TTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGATGGAACGGAATTTGGCACCTGTACCTTTTaGGTGATCTCATTCTTCAGA +
Preference number: 3 (lower is better)
Translates to: LFIVHNKKWHTEKDGTEFGTCTF*VISFFR
Trigger: TCTGAAGAATGAGATCACCAAAAAGGTACAGGTGCC...AAATTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp ACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACAAATGTGCAATCTTCATCATCTaGCGAAGTTTTTCTAAGTTG +
Preference number: 3 (lower is better)
Translates to: TFLLAFHGRWADMMQHKCAIFII*RSFSKL
Trigger: CAACTTAGAAAAACTTCGCAAGATGATGAAGATTGC...ACATTTGTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GAGTTGGTGTGGCCTAGTCACACCAAAATGTATTTATTACATCCTGCTCCTTTCGCTGTCTTGAAGTTCTaGAGCTTGAAGAACAGATTG +
Preference number: 3 (lower is better)
Translates to: ELVWPSHTKMYLLHPAPFAVLKF*SLKNRL
Trigger: CAATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGC...GAAAGGAGCAGGATGTAATAAATACATTTTGGTGTGACTAGGCCACACCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR TCA 72 bp TGTACAAAGCAGGACTGCATTTTCTGCTGGATTGTATaGCATATTGAATACTGGAAACTTGGAACCACTCCG +
Preference number: 3 (lower is better)
Translates to: CTKQDCIFCWIV*HIEYWKLGTTP
Trigger: CGGAGTGGTTCCAAGTTTCCAGTATTCAATATGTCATACAATCCAGCAGAAAATGCAGTCCTGCTTTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGACAGAGGGTACCTGCCTaGAAATTTAAATGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGQRVPA*KFKCLR
Trigger: CCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTG...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TCAGCAATCTTCATCATCTTGCGAAGTTTTTCTAAGTTGCCAGTGATAAGATACAGGGCCAGCTTGAATTaGAACTCAGTGGGATCAATG +
Preference number: 3 (lower is better)
Translates to: SAIFIILRSFSKLPVIRYRASLN*NSVGSM
Trigger: CATTGATCCCACTGAGTTCAAATTCAAGCTGGCCCT...GTATCTTATCACTGGCAACTTAGAAAAACTTCGCAAGATGATGAAGATTGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp TTTTCACAGCAGTTTAGGTCCTCATATATACCCTATGAAAAACATGTGCTTCTTGACTTGTTCCCTTGGTaGGGGGCACAAAGAAACCAT +
Preference number: 3 (lower is better)
Translates to: FSQQFRSSYIPYEKHVLLDLFPW*GAQRNH
Trigger: ATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTC...AAGAAGCACATGTTTTTCATAGGGTATATATGAGGACCTAAACTGCTGTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR-3UTR CAA 90 bp TTGTTTATTGTCCACAACAAGAAGTGGCACACTGAGAAGGATGGAACGGAATTTGTACTATTCTCTAGATaGCTAGCTCTTGTACAAAGC +
Preference number: 3 (lower is better)
Translates to: LFIVHNKKWHTEKDGTEFVLFSR*LALVQS
Trigger: GCTTTGTACAAGAGCTAGCAATCTAGAGAATAGTAC...AAATTCCGTTCCATCCTTCTCAGTGTGCCACTTCTTGTTGTGGACAATAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp CTGAGTACACAGAGGGTACCTGCCTTGAAATTTAAATGTCTAAGGAAAATGGGAGTACTATTCTCTAGATaGCTAGCTCTTGTACAAAGC +
Preference number: 3 (lower is better)
Translates to: LSTQRVPALKFKCLRKMGVLFSR*LALVQS
Trigger: GCTTTGTACAAGAGCTAGCAATCTAGAGAATAGTAC...TCCCATTTTCCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTGTGTACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
3UTR GCA 72 bp GAATGTTCTCATGAATGTTACATAAAGCATCCAGTTTaGGGTTACAGATCACAATGGCGTGTTTGGCTAGTA +
Preference number: 3 (lower is better)
Translates to: ECSHECYIKHPV*GYRSQWRVWLV
Trigger: TACTAGCCAAACACGCCATTGTGATCTGTAACCGCAAACTGGATGCTTTATGTAACATTCATGAGAACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
3UTR-3UTR CAA 90 bp GTAAAGAACAAATCAATAACCCGCAGTGTGCATTTTGGAAAACCAAATAACTTCCAGAGGGTACCTGCCTaGAAATTTAAATGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: VKNKSITRSVHFGKPNNFQRVPA*KFKCLR
Trigger: CCTTAGACATTTAAATTTCAAGGCAGGTACCCTCTG...GAAGTTATTTGGTTTTCCAAAATGCACACTGCGGGTTATTGATTTGTTCTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGCATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 4 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCAGCCCCGACACACCCTaGTGCCCTTCGGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASGPQLVHHSSALHPSSCSPDTP*CPSDAS
Trigger: GGAGGCGTCCGAAGGGCAGCAGGGTGTGTCGGGGCT...GCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCATCTGGTGGTTCCCCTaGAGCAGGGCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFIWWFP*SRATSP
Trigger: GGGAGAAGTGGCCCTGCTGCAGGGGAACCACCAGAT...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGTTCAGCCCCACCAGCTaGCCCAGGGGATATATCCAG +
Preference number: 4 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKFSPTS*PRGYIQ
Trigger: CTGGATATATCCCCTGGGGCAGCTGGTGGGGCTGAA...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp CCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTCACAGGCTGCAGGTTTaGGTGGGTGAAATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PQAWARVLVGAEQRWQLSHRLQV*VGEIGC
Trigger: GCAGCCTATTTCACCCACTCAAACCTGCAGCCTGTG...AGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGCACAGGCTGCAGGTTTaGGTGGGTGAAATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKHRLQV*VGEIGC
Trigger: GCAGCCTATTTCACCCACTCAAACCTGCAGCCTGTG...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp CAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCAGGTATAGGGCATTCAGCCCCGACACACCCTaGTGCCCTTCGGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: QFFRIRTRSDTSPRYRAFSPDTP*CPSDAS
Trigger: GGAGGCGTCCGAAGGGCAGCAGGGTGTGTCGGGGCT...GAATGCCCTATACCTGGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GGCCAGCTTGAATTTGAACTCAGTGGGATCAATGGTGAGTACCCGGGGACGACAAGCCCCGACACACCCTaGTGCCCTTCGGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: GQLEFELSGINGEYPGTTSPDTP*CPSDAS
Trigger: GGAGGCGTCCGAAGGGCAGCAGGGTGTGTCGGGGCT...TGTCGTCCCCGGGTACTCACCATTGATCCCACTGAGTTCAAATTCAAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGTTAGAGACGGGGTGTTaGCATGTTGGCCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKLETGC*HVGQAG
Trigger: ACCTGCCTGGCCAACATGGCAACACCCCGTCTCTAA...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 72 bp GACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTaGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: DRIFRVCWATSG*GPSSSRRRAKV
Trigger: CACCTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCCACAGGCTGCAGGTTTaGGTGGGTGAAATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFHRLQV*VGEIGC
Trigger: GCAGCCTATTTCACCCACTCAAACCTGCAGCCTGTG...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGACCCGACACACCCTGCTaGCCTTCGGACGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGPDTPC*PSDAST
Trigger: CGTGGAGGCGTCCGAAGGGCAGCAGGGTGTGTCGGG...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGAAGCCCCGACACACCCTaGTGCCCTTCGGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGSPDTP*CPSDAS
Trigger: GGAGGCGTCCGAAGGGCAGCAGGGTGTGTCGGGGCT...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTGCAGGCCCCACTGAGTaGACACTTTTCTACTGGCTT +
Preference number: 4 (lower is better)
Translates to: PQAWARVLVGAEQRWQLSAGPTE*TLFYWL
Trigger: AAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGC...AGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGAACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: FRPTAGTPFFSPASFQLRTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGACATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 4 (lower is better)
Translates to: FRPTAGTPFFSPASFQLRHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCACATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 4 (lower is better)
Translates to: GQLVSNGMIGAGGWSSLAHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...TGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCTGCTTCCAGAGCAATCTCAATGTTTCCACACTCCAGTGCCAGACTAAAGCGACCCGACACACCCTGCTaGCCTTCGGACGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: AASRAISMFPHSSARLKRPDTPC*PSDAST
Trigger: CGTGGAGGCGTCCGAAGGGCAGCAGGGTGTGTCGGG...TCGCTTTAGTCTGGCACTGGAGTGTGGAAACATTGAGATTGCTCTGGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp CATGCGCCAGATCTTCACTTGACGATCATCTGCCCCAGATACAATAAGGGGCATAGCCCCGACACACCCTaGTGCCCTTCGGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: HAPDLHLTIICPRYNKGHSPDTP*CPSDAS
Trigger: GGAGGCGTCCGAAGGGCAGCAGGGTGTGTCGGGGCT...ATGCCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTGAAGATCTGGCGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000647799.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GAGCCTGATAGGTTGTGCGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCTTGTATCTGGTGGTTCCCCTaGAGCAGGGCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EPDRLCGLGRMSVGTVACIWWFP*SRATSP
Trigger: GGGAGAAGTGGCCCTGCTGCAGGGGAACCACCAGAT...ACAAGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGTCCAGAGACGAACAGTaGCTGCTGCTTATGGAAGTC +
Preference number: 4 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKSRDEQ*LLLMEV
Trigger: GACTTCCATAAGCAGCAGCCACTGTTCGTCTCTGGA...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTAACTCTTGGCGAGGGTaGAAGACGGCACAAGATACA +
Preference number: 4 (lower is better)
Translates to: PQAWARVLVGAEQRWQLSNSWRG*KTAQDT
Trigger: TGTATCTTGTGCCGTCTTCCACCCTCGCCAAGAGTT...AGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCATGAACAGCATAGGCTaGCCGTTCCCGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFMNSIG*PFPFQL
Trigger: AAGCTGGAACGGGAACGGCCAGCCTATGCTGTTCAT...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GGCCAGCTTGAATTTGAACTCAGTGGGATCAATGGTGAGTACCCGGGGACGACAGGGCCACCTCAGGCTTaGGCCCGAGTTCTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: GQLEFELSGINGEYPGTTGPPQA*ARVLVG
Trigger: GCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCC...TGTCGTCCCCGGGTACTCACCATTGATCCCACTGAGTTCAAATTCAAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGGGCCACCTCAGGCTTaGGCCCGAGTTCTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQGPPQA*ARVLVG
Trigger: GCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCC...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGAACCTCCCATGCCTTTaGTTCATTCATGCGCCAGAT +
Preference number: 4 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKNLPCL*FIHAPD
Trigger: ATCTGGCGCATGAATGAATCAAAGGCATGGGAGGTT...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp AGGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCAACGGCTGTCAGGCCTaGGGATCGTTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RPIGIQWHDRCRWLEQLGNGCQA*GSFPFR
Trigger: CCTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTT...GCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGACAGTGGGATCAATGGTaGGTACCCGGGGACGACACT +
Preference number: 4 (lower is better)
Translates to: FRPTAGTPFFSPASFQLRQWDQW*VPGDDT
Trigger: AGTGTCGTCCCCGGGTACTCACCATTGATCCCACTG...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp ACCAGATCTGAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCCCGACACACCCTGCTaGCCTTCGGACGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: TRSELDLFPWLGAQRNHLPDTPC*PSDAST
Trigger: CGTGGAGGCGTCCGAAGGGCAGCAGGGTGTGTCGGG...AAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAACTCAGATCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TTGAAGTTCTTGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGCACCAGGATCAGCCCCGACACACCCTaGTGCCCTTCGGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: LKFLSLKNRLRAVRSTRISPDTP*CPSDAS
Trigger: GGAGGCGTCCGAAGGGCAGCAGGGTGTGTCGGGGCT...GATCCTGGTGCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp CCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTGCTTATGGAAGTCAATaGCTCGCACTGGACCATCAT +
Preference number: 4 (lower is better)
Translates to: PQAWARVLVGAEQRWQLSAYGSQ*LALDHH
Trigger: ATGATGGTCCAGTGCGAGGCATTGACTTCCATAAGC...AGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TCCTTCTTCCTGTCCCTTGCCAAGAGCATCATCCCCCAAACCTTCTGTAGCCTCATCTGGTGGTTCCCCTaGAGCAGGGCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SFFLSLAKSIIPQTFCSLIWWFP*SRATSP
Trigger: GGGAGAAGTGGCCCTGCTGCAGGGGAACCACCAGAT...GAGGCTACAGAAGGTTTGGGGGATGATGCTCTTGGCAAGGGACAGGAAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp CAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCAGGTATAGGGCATTCATCTGGTGGTTCCCCTaGAGCAGGGCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QFFRIRTRSDTSPRYRAFIWWFP*SRATSP
Trigger: GGGAGAAGTGGCCCTGCTGCAGGGGAACCACCAGAT...GAATGCCCTATACCTGGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGATCTGGTGGTTCCCCTaGAGCAGGGCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLIWWFP*SRATSP
Trigger: GGGAGAAGTGGCCCTGCTGCAGGGGAACCACCAGAT...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TGGTGGTTCCCCTGCAGCAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTTGCAATGGCATGATAGGTaGAGGTGGCTGGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: WWFPCSRATSPSFSQQFLQWHDR*RWLEQL
Trigger: AAGCTGCTCCAGCCACCTGCACCTATCATGCCATTG...CAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTGCTGCAGGGGAACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGAATCCAACTGCAGCTCTaGATCCTCTCCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FRPTAGTPFFSPASFQLRIQLQL*ILSPAL
Trigger: GAGGGCTGGGGAGAGGATGCAGAGCTGCAGTTGGAT...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCTTGTAGGGGCCAAACTGGATTACCCCTACTTGGTCATGAAGGAGCCGCATGGGAGCCTGATAGGTTGTaGGGCCTCGGGCGTATGTCT +
Preference number: 4 (lower is better)
Translates to: ACRGQTGLPLLGHEGAAWEPDRL*GLGRMS
Trigger: AGACATACGCCCGAGGCCGCACAACCTATCAGGCTC...CCATGCGGCTCCTTCATGACCAAGTAGGGGTAATCCAGTTTGGCCCCTACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGAGAGCCTGATAGGTTGTaGGGCCTCGGGCGTATGTCT +
Preference number: 4 (lower is better)
Translates to: FRPTAGTPFFSPASFQLREPDRL*GLGRMS
Trigger: AGACATACGCCCGAGGCCGCACAACCTATCAGGCTC...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCCTGCCATCTCACAGATaGGCTTCTGCTGTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFLPSHR*ASAVLE
Trigger: CTCTAGAACAGCAGAAGCGCATCTGTGAGATGGCAG...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGGTTCGAATGATCCCGTaGTCCCCAGTGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRVRMIP*SPVVTA
Trigger: TGCTGTCACCACTGGGGACCACGGGATCATTCGAAC...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTCTCCCTTCCCTTTGCTaGCAATGGTGCCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: PQAWARVLVGAEQRWQLSLPSLC*QWCLQK
Trigger: TTTTTGAAGGCACCATTGCCAGCAAAGGGAAGGGAG...AGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCATGGTGATGAGCTGCTaGGCCTCTGCAATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFMVMSC*ASAISC
Trigger: ACAAGAGATTGCAGAGGCCCAGCAGCTCATCACCAT...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGAGGGCCACCTCAGGCTTaGGCCCGAGTTCTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGGPPQA*ARVLVG
Trigger: GCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCC...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 72 bp CATACATGGAGGGTAGGCAGGGCAGAGCCTGATAGGTaGTGCGGCCTCGGGCGTATGTCTGTAGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: HTWRVGRAEPDR*CGLGRMSVGTV
Trigger: AACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGGCTCTGCCCTGCCTACCCTCCATGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
3UTR CAA 72 bp GCCAACTGTGGTGAGCTGGTAGCACAGCTGCAACCGTaGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: ANCGELVAQLQP*DEVIKLQAHSW
Trigger: CCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAACGGTTGCAGCTGTGCTACCAGCTCACCACAGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp AGGGACTTCTGTCCACAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCCACACTCGGATGGTCTaGTCATCGGAGGCACTCAGA +
Preference number: 4 (lower is better)
Translates to: RDFCPQFFRIRTRSDTSPHTRMV*SSEALR
Trigger: TCTGAGTGCCTCCGATGATCAGACCATCCGAGTGTG...GGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTGTGGACAGAAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
CDS-3UTR TCA 90 bp CTCCCCAGCCCTCTGTACCAACAGTGTCAATGTCAATGTCAGCAGCCAGTGCTCTCTCTGCGGAAAGTCTaGACCCCAGTCCGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: LPSPLYQQCQCQCQQPVLSLRKV*TPVRLD
Trigger: GTCTAAGCGGACTGGGGTTCAGACTTTCCGCAGAGA...GAGCACTGGCTGCTGACATTGACATTGACACTGTTGGTACAGAGGGCTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGAACGGCTGTCAGGCCTaGGGATCGTTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLNGCQA*GSFPFR
Trigger: CCTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTT...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATCAGTGGGATCAATGGTaGGTACCCGGGGACGACACT +
Preference number: 4 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDQWDQW*VPGDDT
Trigger: AGTGTCGTCCCCGGGTACTCACCATTGATCCCACTG...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TTGAGGGCTGTACGCAGCACCAGGATCATGTGCACAGGCTGCAGGTTTGAGTGGGCAGGTTTGAGTGGGTaGAATAGGCTGCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: LRAVRSTRIMCTGCRFEWAGLSG*NRLPSH
Trigger: GTGAGATGGCAGCCTATTTCACCCACTCAAACCTGC...CCACTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCTGCGTACAGCCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp ACCGATTTCGAGCGACCCAAACGGCTGTCAGGCCTGAGGATCGTTTCCCTTCAGGGAACATATGGTGACTaGCCCATGCACACAAAGGGG +
Preference number: 4 (lower is better)
Translates to: TDFERPKRLSGLRIVSLQGTYGD*PMHTKG
Trigger: CCCCTTTGTGTGCATGGGTCAGTCACCATATGTTCC...CTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTTTGGGTCGCTCGAAATCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGAACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGACATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp CCAAGAGCATCATCCCCCAAACCTTCTGTAGCCTCCACAAACCCATCTTCATCCCATGCCTCAGCCTCCTaGGCAGCTGGGACTATAGGC +
Preference number: 4 (lower is better)
Translates to: PRASSPKPSVASTNPSSSHASAS*AAGTIG
Trigger: GCCTATAGTCCCAGCTGCTCAGGAGGCTGAGGCATG...GGATGAAGATGGGTTTGTGGAGGCTACAGAAGGTTTGGGGGATGATGCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGAATCTGGTGGTTCCCCTaGAGCAGGGCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGIWWFP*SRATSP
Trigger: GGGAGAAGTGGCCCTGCTGCAGGGGAACCACCAGAT...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATATCCAACTGCAGCTCTaGATCCTCTCCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDIQLQL*ILSPAL
Trigger: GAGGGCTGGGGAGAGGATGCAGAGCTGCAGTTGGAT...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCATCCAACTGCAGCTCTaGATCCTCTCCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ASVGFFSQADRIFRVCWAIQLQL*ILSPAL
Trigger: GAGGGCTGGGGAGAGGATGCAGAGCTGCAGTTGGAT...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTCAGCCCCACCAGCTaGCCCAGGGGATATATCCAG +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLFSPTS*PRGYIQ
Trigger: CTGGATATATCCCCTGGGGCAGCTGGTGGGGCTGAA...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGTTCAGCCCCACCAGCTaGCCCAGGGGATATATCCAG +
Preference number: 4 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQFSPTS*PRGYIQ
Trigger: CTGGATATATCCCCTGGGGCAGCTGGTGGGGCTGAA...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGGAGCCTGATAGGTTGTaGGGCCTCGGGCGTATGTCT +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLEPDRL*GLGRMS
Trigger: AGACATACGCCCGAGGCCGCACAACCTATCAGGCTC...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCACCATTCTTCAGCCCTaGATCCTTCCAGTTGCGATT +
Preference number: 4 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFTILQP*ILPVAI
Trigger: AATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGT...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTAGGCAAACGCGCACAGTCTaGTCCAGGCTGGCTGATACT +
Preference number: 4 (lower is better)
Translates to: AHSWYTILQPCILPVAIRQTRTV*SRLADT
Trigger: AGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTG...CCTAATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTAGCCTCCACAAACCCATCTTCATCCAACTGCAGCTCTGCATCCTCTCCCCAGCAAACGCGCACAGTCTaGTCCAGGCTGGCTGATACT +
Preference number: 4 (lower is better)
Translates to: VASTNPSSSNCSSASSPQQTRTV*SRLADT
Trigger: AGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTG...CTGGGGAGAGGATGCAGAGCTGCAGTTGGATGAAGATGGGTTTGTGGAGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GCCATGGGTAGCAGCTGTGAGATAGGCCAGGGACTTCTGTCCACAGTTCTTCAGAGGGGCATAGTGGGGTaGAAGGCAGCCCAGTTTACT +
Preference number: 4 (lower is better)
Translates to: AMGSSCEIGQGLLSTVLQRGIVG*KAAQFT
Trigger: AGTAAACTGGGCTGCCTTCCACCCCACTATGCCCCT...CTGAAGAACTGTGGACAGAAGTCCCTGGCCTATCTCACAGCTGCTACCCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TGGTGGTTCCCCTGCAGCAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTTGAACTCTTGGCGAGGGTaGAAGACGGCACAAGATACA +
Preference number: 4 (lower is better)
Translates to: WWFPCSRATSPSFSQQFLNSWRG*KTAQDT
Trigger: TGTATCTTGTGCCGTCTTCCACCCTCGCCAAGAGTT...CAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTGCTGCAGGGGAACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CCCCTACTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGACATGATAGGTGCAGGTaGCTGGAGCAGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: PLLGHEGAAWLFRKSLPGHDRCR*LEQLGI
Trigger: AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG...TCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAGTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCACACCAGATCTGAGTTaGACTTGTTCCCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GRQDFSGLLGHLRLGPEFTPDLS*TCSLGW
Trigger: CCAACCAAGGGAACAAGTCCAACTCAGATCTGGTGT...GAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GCCATGGGTAGCAGCTGTGAGATAGGCCAGGGACTTCTGTCCACAGTTCTTCAGCTTCAGGCCCACAGCTaGTACACCATTCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: AMGSSCEIGQGLLSTVLQLQAHS*YTILQP
Trigger: GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAG...CTGAAGAACTGTGGACAGAAGTCCCTGGCCTATCTCACAGCTGCTACCCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TGGTGGTTCCCCTGCAGCAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTTGATGGTGATGAGCTGCTaGGCCTCTGCAATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: WWFPCSRATSPSFSQQFLMVMSC*ASAISC
Trigger: ACAAGAGATTGCAGAGGCCCAGCAGCTCATCACCAT...CAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTGCTGCAGGGGAACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGCCACCTCAGGCTTaGGCCCGAGTTCTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: QLVSNGMIGAGGWSSLALGPPQA*ARVLVG
Trigger: GCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCC...TAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp ATCCAGTGCTTTGGCTGCTTCCAGAGCAATCTCAATGTTTCCACACTCCAGTGCGGGCCACCTCAGGCTTaGGCCCGAGTTCTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: IQCFGCFQSNLNVSTLQCGPPQA*ARVLVG
Trigger: GCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCC...GCACTGGAGTGTGGAAACATTGAGATTGCTCTGGAAGCAGCCAAAGCACTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTACTTTGGTGGGGTGCCTGCATGGGTGAACAAGAACATGAGAGTGTCCAAGAAGGGCCACCTCAGGCTTaGGCCCGAGTTCTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: VLWWGACMGEQEHESVQEGPPQA*ARVLVG
Trigger: GCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCC...TTCTTGGACACTCTCATGTTCTTGTTCACCCATGCAGGCACCCCACCAAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241704.8
ENST00000649676.1
ENST00000649963.1
CDS-3UTR CCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGGCTGGTAGGCATCTGTaGGATTCTTCTCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRAGRHL*DSSHRQ
Trigger: CTGCCTGTGAGAAGAATCCCACAGATGCCTACCAGC...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGGCTTTCCACGGTAGATaGGCCGATATGATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRAFHGR*ADMMQH
Trigger: GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGC...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CCTGATAGGTTGTGCGGCCTCGGGCGTATGTCTGTAGGAACAGTTGCTTGTAGGCAGGTCTCGAACTCCTaGCCTCAGATGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PDRLCGLGRMSVGTVACRQVSNS*PQMICP
Trigger: TGGGCAGATCATCTGAGGCCAGGAGTTCGAGACCTG...CCTACAAGCAACTGTTCCTACAGACATACGCCCGAGGCCGCACAACCTATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCGGGGTGTTGCCATGTTaGCCAGGCAGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: QWHDRCRWLEQLGIRVNVGVLPC*PGRSRT
Trigger: AGTTCGAGACCTGCCTGGCCAACATGGCAACACCCC...GACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCACAAGGTCTTTTGGGGTaGAAGCTGAGCCCTTTGACC +
Preference number: 4 (lower is better)
Translates to: GQLVSNGMIGAGGWSSLAQGLLG*KLSPLT
Trigger: GGTCAAAGGGCTCAGCTTTCACCCCAAAAGACCTTG...TGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCCTGGTCCAGGCTGGCTaGTACTACCAAGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSLVQAG*YYQVFC
Trigger: ACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAG...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCTCTCTGCGGAAAGTCTaGACCCCAGTCCGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: ASVGFFSQADRIFRVCWASLRKV*TPVRLD
Trigger: GTCTAAGCGGACTGGGGTTCAGACTTTCCGCAGAGA...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGAAACGGCTGTCAGGCCTaGGGATCGTTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGNGCQA*GSFPFR
Trigger: CCTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTT...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCAACGGCTGTCAGGCCTaGGGATCGTTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFNGCQA*GSFPFR
Trigger: CCTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTT...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGAATCCAGAGTTCGAATaGTCCCGTGGTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLNPEFE*SRGPQW
Trigger: CCACTGGGGACCACGGGATCATTCGAACTCTGGATT...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGACAGTGGGATCAATGGTaGGTACCCGGGGACGACACT +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGQWDQW*VPGDDT
Trigger: AGTGTCGTCCCCGGGTACTCACCATTGATCCCACTG...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGAATTTGCCAACTGTGGTaGGCTGGTAGCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FRPTAGTPFFSPASFQLRICQLW*AGSTAA
Trigger: TGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAAT...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp ACAGCAAACCGATTTCGAGCGACCCAAACGGCTGTCAGGCCTGAGGATCGTTTCGCAGGTTTGAGTGGGTaGAATAGGCTGCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: TANRFRATQTAVRPEDRFAGLSG*NRLPSH
Trigger: GTGAGATGGCAGCCTATTTCACCCACTCAAACCTGC...GAAACGATCCTCAGGCCTGACAGCCGTTTGGGTCGCTCGAAATCGGTTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGAGCAGGTTTGAGTGGGTaGAATAGGCTGCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: FRPTAGTPFFSPASFQLRAGLSG*NRLPSH
Trigger: GTGAGATGGCAGCCTATTTCACCCACTCAAACCTGC...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGCACAGGCTGCAGGTTTaGGTGGGTGAAATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLHRLQV*VGEIGC
Trigger: GCAGCCTATTTCACCCACTCAAACCTGCAGCCTGTG...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp CACAGCTGCAACCGTTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACACAGGCTGCAGGTTTaGGTGGGTGAAATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HSCNRWMRSLSFRPTAGTHRLQV*VGEIGC
Trigger: GCAGCCTATTTCACCCACTCAAACCTGCAGCCTGTG...TGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAACGGTTGCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TCCCGTTCCAGCTTAAACACAATCATACCACCATCATGGCCTGCTGCAAAGAGGACTCCTGGCCTCAGATaGTCTGCCCACCGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: SRSSLNTIIPPSWPAAKRTPGLR*SAHRSL
Trigger: GAGGCTACGGTGGGCAGATCATCTGAGGCCAGGAGT...CCTCTTTGCAGCAGGCCATGATGGTGGTATGATTGTGTTTAAGCTGGAACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp ACAGCAAACCGATTTCGAGCGACCCAAACGGCTGTCAGGCCTGAGGATCGTTTCGCCAGAGTCCGCTTCTaGTGTACGTCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TANRFRATQTAVRPEDRFARVRF*CTSKSV
Trigger: CACACTCTTTGACGTACAGCAGAAGCGGACTCTGGC...GAAACGATCCTCAGGCCTGACAGCCGTTTGGGTCGCTCGAAATCGGTTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTAGCCTCCACAAACCCATCTTCATCCAACTGCAGCTCTGCATCCTCTCCCCAGGCCAGAGTCCGCTTCTaGTGTACGTCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VASTNPSSSNCSSASSPQARVRF*CTSKSV
Trigger: CACACTCTTTGACGTACAGCAGAAGCGGACTCTGGC...CTGGGGAGAGGATGCAGAGCTGCAGTTGGATGAAGATGGGTTTGTGGAGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGAATCCAACTGCAGCTCTaGATCCTCTCCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGIQLQL*ILSPAL
Trigger: GAGGGCTGGGGAGAGGATGCAGAGCTGCAGTTGGAT...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAACCGTTGGATGAGGTCATTATCCAACTGCAGCTCTaGATCCTCTCCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FANCGELVAQLQPLDEVIIQLQL*ILSPAL
Trigger: GAGGGCTGGGGAGAGGATGCAGAGCTGCAGTTGGAT...AATGACCTCATCCAACGGTTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACATCCAACTGCAGCTCTaGATCCTCTCCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VDTFLLAFHGRWADMMQHIQLQL*ILSPAL
Trigger: GAGGGCTGGGGAGAGGATGCAGAGCTGCAGTTGGAT...GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp CCAAGAGCATCATCCCCCAAACCTTCTGTAGCCTCCACAAACCCATCTTCATCCTTCAGCCCCACCAGCTaGCCCAGGGGATATATCCAG +
Preference number: 4 (lower is better)
Translates to: PRASSPKPSVASTNPSSSFSPTS*PRGYIQ
Trigger: CTGGATATATCCCCTGGGGCAGCTGGTGGGGCTGAA...GGATGAAGATGGGTTTGTGGAGGCTACAGAAGGTTTGGGGGATGATGCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCGAGCCTGATAGGTTGTaGGGCCTCGGGCGTATGTCT +
Preference number: 4 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFEPDRL*GLGRMS
Trigger: AGACATACGCCCGAGGCCGCACAACCTATCAGGCTC...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACGAGCCTGATAGGTTGTaGGGCCTCGGGCGTATGTCT +
Preference number: 4 (lower is better)
Translates to: VDTFLLAFHGRWADMMQHEPDRL*GLGRMS
Trigger: AGACATACGCCCGAGGCCGCACAACCTATCAGGCTC...GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCTTGTAGGGGCCAAACTGGATTACCCCTACTTGGTCATGAAGGAGCCGCATGGAGCACCAGGATCATGTaGACAGGCTGCAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: ACRGQTGLPLLGHEGAAWSTRIM*TGCRFE
Trigger: CTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCT...CCATGCGGCTCCTTCATGACCAAGTAGGGGTAATCCAGTTTGGCCCCTACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCTGTACGCAGCACCAGGATCATGTGCACAGGCTGCAGGTTTGAGTGGGTGAAAAGCACCAGGATCATGTaGACAGGCTGCAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AVRSTRIMCTGCRFEWVKSTRIM*TGCRFE
Trigger: CTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCT...TTTCACCCACTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCTGCGTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATAAGCACCAGGATCATGTaGACAGGCTGCAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GPTEWTLFYWLSTVDGPISTRIM*TGCRFE
Trigger: CTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCT...TATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAGACGGGGTGTTaGCATGTTGGCCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLLETGC*HVGQAG
Trigger: ACCTGCCTGGCCAACATGGCAACACCCCGTCTCTAA...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQLVSNGMIGAGGWSSLAFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...TGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCTTGTAGGGGCCAAACTGGATTACCCCTACTTGGTCATGAAGGAGCCGCATGGTTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ACRGQTGLPLLGHEGAAWFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...CCATGCGGCTCCTTCATGACCAAGTAGGGGTAATCCAGTTTGGCCCCTACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGATCCAGTGCTTTGGCTaGTTCCAGAGCAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRIQCFG*FQSNPV
Trigger: CACTGGATTGCTCTGGAAGCAGCCAAAGCACTGGAT...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649231.1
CDS-3UTR CCA 90 bp GCCATGGGTAGCAGCTGTGAGATAGGCCAGGGACTTCTGTCCACAGTTCTTCAGAGTTCCACACTCGGATaGTCTGATCATCGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: AMGSSCEIGQGLLSTVLQSSTLG*SDHRRH
Trigger: GTGCCTCCGATGATCAGACCATCCGAGTGTGGAACT...CTGAAGAACTGTGGACAGAAGTCCCTGGCCTATCTCACAGCTGCTACCCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
CDS-3UTR CCA 90 bp ACCGATTTCGAGCGACCCAAACGGCTGTCAGGCCTGAGGATCGTTTCCCTTCAGCTACCAAGTCTTCTGTaGGGTGGAACTGAGCACACA +
Preference number: 4 (lower is better)
Translates to: TDFERPKRLSGLRIVSLQLPSLL*GGTEHT
Trigger: TGTGTGCTCAGTTCCACCCCACAGAAGACTTGGTAG...CTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTTTGGGTCGCTCGAAATCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATCAAACGCGCACAGTCTaGTCCAGGCTGGCTGATACT +
Preference number: 4 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDQTRTV*SRLADT
Trigger: AGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTG...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATAGGGGCATAGTGGGGTaGAAGGCAGCCCAGTTTACT +
Preference number: 4 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDRGIVG*KAAQFT
Trigger: AGTAAACTGGGCTGCCTTCCACCCCACTATGCCCCT...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGAGGGGCATAGTGGGGTaGAAGGCAGCCCAGTTTACT +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLRGIVG*KAAQFT
Trigger: AGTAAACTGGGCTGCCTTCCACCCCACTATGCCCCT...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGCTGAGGATCAACTCTTaGCGAGGGTGGAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLLRINS*RGWKTA
Trigger: TGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAG...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TGTAGCCTCCACAAACCCATCTTCATCCAACTGCAGCTCTGCATCCTCTCCCCACTGAGGATCAACTCTTaGCGAGGGTGGAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: CSLHKPIFIQLQLCILSPLRINS*RGWKTA
Trigger: TGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAG...TGGGGAGAGGATGCAGAGCTGCAGTTGGATGAAGATGGGTTTGTGGAGGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTAGGATGAACAGCATAGGCTaGCCGTTCCCGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AHSWYTILQPCILPVAIRMNSIG*PFPFQL
Trigger: AAGCTGGAACGGGAACGGCCAGCCTATGCTGTTCAT...CCTAATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCCCCACCAGCTGGCGCATCAGGATTCTaGGAGTCAGCATCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: GLVPLVGGTKKPSSAPPAGASGF*ESASLG
Trigger: CCCTAAAGATGCTGACTCCCAGAATCCTGATGCGCC...AGCTGGTGGGGCTGAAGATGGTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGGTTCGAATGATCCCGTaGTCCCCAGTGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLVRMIP*SPVVTA
Trigger: TGCTGTCACCACTGGGGACCACGGGATCATTCGAAC...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp AGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATTGTCTCCTTCTCATTTCCACAATCTGGTaGTTCCCCTGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RWLEQLGIRVNVWDCLLLISTIW*FPCSRA
Trigger: GGCCCTGCTGCAGGGGAACCACCAGATTGTGGAAAT...GAGAAGGAGACAATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGACACATTTCCACAATCTaGTGGTTCCCCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FRPTAGTPFFSPASFQLRHISTI*WFPCSR
Trigger: CCTGCTGCAGGGGAACCACCAGATTGTGGAAATGTG...TCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGATAGGTGCAGGTGGCTaGAGCAGCTTGGCATTAGGG +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLIGAGG*SSLALG
Trigger: CCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTAT...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCATAGGTGCAGGTGGCTaGAGCAGCTTGGCATTAGGG +
Preference number: 4 (lower is better)
Translates to: SVGFFSQADRIFRVCWATIGAGG*SSLALG
Trigger: CCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTAT...GGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TGGTGGTTCCCCTGCAGCAGGGCCACTTCTCCCAGCTTTTCCCAGCAGTTCTTGTTGGACTTGTTCCCTTaGTTGGGGGCACAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: WWFPCSRATSPSFSQQFLLDLFP*LGAQRN
Trigger: GTTTCTTTGTGCCCCCAACCAAGGGAACAAGTCCAA...CAAGAACTGCTGGGAAAAGCTGGGAGAAGTGGCCCTGCTGCAGGGGAACCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CCGAGTTCTAGTAGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTTGAGCCATGAAGGAGCCGCATaGCTGTTTCGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PSSSRRRAKVAAVLKFLSHEGAA*LFRKSL
Trigger: CAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATG...GCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCTACTAGAACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CACAGCTGCAACCGTTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACTTCAGGCCCACAGCTaGTACACCATTCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HSCNRWMRSLSFRPTAGTLQAHS*YTILQP
Trigger: GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAG...TGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAACGGTTGCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGATTTTTCGGGTCTGTTaGGCCACCTCAGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLIFRVC*ATSGLG
Trigger: GCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAAT...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp AGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATTGTCTCGGTGGGGTGCCTGCATaGGTGAACAAGAACATGAGA +
Preference number: 4 (lower is better)
Translates to: RCRWLEQLGIRVNVWDCLGGVPA*VNKNMR
Trigger: TCTCATGTTCTTGTTCACCCATGCAGGCACCCCACC...GAGACAATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
3UTR CAA 72 bp AGGCGCCGAGCAAAGGTGGCAGCTGTCTTGAAGTTCTaGAGCTTGAAGAACAGATTGAGGGCTGTACGCAGC +
Preference number: 4 (lower is better)
Translates to: RRRAKVAAVLKF*SLKNRLRAVRS
Trigger: GCTGCGTACAGCCCTCAATCTGTTCTTCAAGCTCAAGAACTTCAAGACAGCTGCCACCTTTGCTCGGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGCAAGGTCTTTTGGGGTaGAAGCTGAGCCCTTTGACC +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLQGLLG*KLSPLT
Trigger: GGTCAAAGGGCTCAGCTTTCACCCCAAAAGACCTTG...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGAGTGCCCAAGCAATGTaGAAAGACAGCGCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLSAQAM*KDSAEA
Trigger: AGCTTCGGCGCTGTCTTTTCACATTGCTTGGGCACT...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649787.1
ENST00000649963.1
CDS-3UTR TCA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATAGTGCCCAAGCAATGTaGAAAGACAGCGCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDSAQAM*KDSAEA
Trigger: AGCTTCGGCGCTGTCTTTTCACATTGCTTGGGCACT...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
CDS-3UTR TCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGCTGGTCCAGGCTGGCTaGTACTACCAAGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLLVQAG*YYQVFC
Trigger: ACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAG...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp CAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCAGGTATAGGGCATTCCTGGTCCAGGCTGGCTaGTACTACCAAGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QFFRIRTRSDTSPRYRAFLVQAG*YYQVFC
Trigger: ACAGAAGACTTGGTAGTATCAGCCAGCCTGGACCAG...GAATGCCCTATACCTGGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp AGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGTGTCCTCAGAATTGCTaGGGATCAACTCTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: SFRPTAGTPFFSPASFQLCPQNC*GSTLGE
Trigger: CTCGCCAAGAGTTGATCCTCAGCAATTCTGAGGACA...CAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGATCTCTGCGGAAAGTCTaGACCCCAGTCCGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGSLRKV*TPVRLD
Trigger: GTCTAAGCGGACTGGGGTTCAGACTTTCCGCAGAGA...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCTCTCTGCGGAAAGTCTaGACCCCAGTCCGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: SLSFRPTAGTPFFSPASFSLRKV*TPVRLD
Trigger: GTCTAAGCGGACTGGGGTTCAGACTTTCCGCAGAGA...GAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp AGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATTGTCTCAGGTTAAGGTTAGGGTaGGCAGCTAGGACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RCRWLEQLGIRVNVWDCLRLRLG*AARTQK
Trigger: TTTCTGGGTCCTAGCTGCTCACCCTAACCTTAACCT...GAGACAATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTACTTTGGTGGGGTGCCTGCATGGGTGAACAAGAACATGAGAGTGTCCAAGAAAACGGCTGTCAGGCCTaGGGATCGTTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VLWWGACMGEQEHESVQENGCQA*GSFPFR
Trigger: CCTGAAGGGAAACGATCCTCAGGCCTGACAGCCGTT...TTCTTGGACACTCTCATGTTCTTGTTCACCCATGCAGGCACCCCACCAAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241704.8
ENST00000649676.1
ENST00000649963.1
CDS-3UTR TCA 90 bp CAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCCCCAGGCCCCACTCTTaGCACGAATGTTCTCATGAA +
Preference number: 4 (lower is better)
Translates to: QWHDRCRWLEQLGIRVNVPRPHS*HECSHE
Trigger: TTCATGAGAACATTCGTGTCAAGAGTGGGGCCTGGG...GACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCCCCAGGCCCCACTCTTaGCACGAATGTTCTCATGAA +
Preference number: 4 (lower is better)
Translates to: SVGFFSQADRIFRVCWATPRPHS*HECSHE
Trigger: TTCATGAGAACATTCGTGTCAAGAGTGGGGCCTGGG...GGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCTAATCCAGAGTTCGAATaGTCCCGTGGTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: WMRSLSFRPTAGTPFFSPNPEFE*SRGPQW
Trigger: CCACTGGGGACCACGGGATCATTCGAACTCTGGATT...AGGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TTGGATGAGGTCATTAAGCTTCAGGCCCACAGCTGGTACACCATTCTTCAGCCCAATCCAGAGTTCGAATaGTCCCGTGGTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LDEVIKLQAHSWYTILQPNPEFE*SRGPQW
Trigger: CCACTGGGGACCACGGGATCATTCGAACTCTGGATT...GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAGCTTAATGACCTCATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGCCCTTCACCCGTGTaGCATAGATGGGTAAATCCA +
Preference number: 4 (lower is better)
Translates to: GPTEWTLFYWLSTVDGPICPSPV*HRWVNP
Trigger: TGGATTTACCCATCTATGTCACACGGGTGAAGGGCA...TATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp AGGCCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCTGCCCTTCACCCGTGTaGCATAGATGGGTAAATCCA +
Preference number: 4 (lower is better)
Translates to: RPIGIQWHDRCRWLEQLGCPSPV*HRWVNP
Trigger: TGGATTTACCCATCTATGTCACACGGGTGAAGGGCA...GCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GGCCAGCTTGAATTTGAACTCAGTGGGATCAATGGTGAGTACCCGGGGACGACAGCAGGTTTGAGTGGGTaGAATAGGCTGCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: GQLEFELSGINGEYPGTTAGLSG*NRLPSH
Trigger: GTGAGATGGCAGCCTATTTCACCCACTCAAACCTGC...TGTCGTCCCCGGGTACTCACCATTGATCCCACTGAGTTCAAATTCAAGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGGCAGGTTTGAGTGGGTaGAATAGGCTGCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLAGLSG*NRLPSH
Trigger: GTGAGATGGCAGCCTATTTCACCCACTCAAACCTGC...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR TCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGACACAGGCTGCAGGTTTaGGTGGGTGAAATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGHRLQV*VGEIGC
Trigger: GCAGCCTATTTCACCCACTCAAACCTGCAGCCTGTG...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp AGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCACTTGACGATCATCTaGCCCAGATACAATAAGGGG +
Preference number: 4 (lower is better)
Translates to: RIFRVCWATSGLGPSSSRHLTII*PRYNKG
Trigger: CCCCTTATTGTATCTGGGGCAGATGATCGTCAAGTG...CCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGACCCGAAAAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTAGCCTCCACAAACCCATCTTCATCCAACTGCAGCTCTGCATCCTCTCCCCAGAACGATCATGGTCTCTaGGGAAAGTCTGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: VASTNPSSSNCSSASSPQNDHGL*GKSEPQ
Trigger: CTGGGGTTCAGACTTTCCGCAGAGACCATGATCGTT...CTGGGGAGAGGATGCAGAGCTGCAGTTGGATGAAGATGGGTTTGTGGAGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATAAACGATCATGGTCTCTaGGGAAAGTCTGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: GPTEWTLFYWLSTVDGPINDHGL*GKSEPQ
Trigger: CTGGGGTTCAGACTTTCCGCAGAGACCATGATCGTT...TATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCTTGTAGGGGCCAAACTGGATTACCCCTACTTGGTCATGAAGGAGCCGCATGGCTCGAAGCAGGAGATTaGCTGTGCCAGCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: ACRGQTGLPLLGHEGAAWLEAGD*LCQHRR
Trigger: TCTTCTATGCTGGCACAGGCAATCTCCTGCTTCGAG...CCATGCGGCTCCTTCATGACCAAGTAGGGGTAATCCAGTTTGGCCCCTACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGGCCAGAGTCCGCTTCTaGTGTACGTCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLARVRF*CTSKSV
Trigger: CACACTCTTTGACGTACAGCAGAAGCGGACTCTGGC...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGGCCAGAGTCCGCTTCTaGTGTACGTCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQARVRF*CTSKSV
Trigger: CACACTCTTTGACGTACAGCAGAAGCGGACTCTGGC...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp CCCTTGCCAAGAGCATCATCCCCCAAACCTTCTGTAGCCTCCACAAACCCATCTGCCAGAGTCCGCTTCTaGTGTACGTCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PLPRASSPKPSVASTNPSARVRF*CTSKSV
Trigger: CACACTCTTTGACGTACAGCAGAAGCGGACTCTGGC...AGATGGGTTTGTGGAGGCTACAGAAGGTTTGGGGGATGATGCTCTTGGCAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp CTCCCCAGCCCTCTGTACCAACAGTGTCAATGTCAATGTCAGCAGCCAGTGCTCGTTCTTGTCATCCAGTaGTTTGGCTGCTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPSPLYQQCQCQCQQPVLVLVIQ*FGCFQS
Trigger: GCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAAC...GAGCACTGGCTGCTGACATTGACATTGACACTGTTGGTACAGAGGGCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCTGTACGCAGCACCAGGATCATGTGCACAGGCTGCAGGTTTGAGTGGGTGAAAGTTCTTGTCATCCAGTaGTTTGGCTGCTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: AVRSTRIMCTGCRFEWVKVLVIQ*FGCFQS
Trigger: GCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAAC...TTTCACCCACTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCTGCGTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp AGGGACTTCTGTCCACAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCGTTCTTGTCATCCAGTaGTTTGGCTGCTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RDFCPQFFRIRTRSDTSPVLVIQ*FGCFQS
Trigger: GCTCTGGAAGCAGCCAAAGCACTGGATGACAAGAAC...GGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTGTGGACAGAAGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGCAATGGCATGATAGGTaGAGGTGGCTGGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLQWHDR*RWLEQL
Trigger: AAGCTGCTCCAGCCACCTGCACCTATCATGCCATTG...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp CAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTATTCAGCCCCACCAGCTaGCCCAGGGGATATATCCAG +
Preference number: 4 (lower is better)
Translates to: QLVSNGMIGAGGWSSLALFSPTS*PRGYIQ
Trigger: CTGGATATATCCCCTGGGGCAGCTGGTGGGGCTGAA...TAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GGAACCACTCCGCAACTGCATCACAGCTACATCTTTGGAGCTGTTGAAATCCAGTTCAGCCCCACCAGCTaGCCCAGGGGATATATCCAG +
Preference number: 4 (lower is better)
Translates to: GTTPQLHHSYIFGAVEIQFSPTS*PRGYIQ
Trigger: CTGGATATATCCCCTGGGGCAGCTGGTGGGGCTGAA...CTGGATTTCAACAGCTCCAAAGATGTAGCTGTGATGCAGTTGCGGAGTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCCATGGGTAGCAGCTGTGAGATAGGCCAGGGACTTCTGTCCACAGTTCTTCAGCAAATGGTGATGAGCTaGTGGGCCTCTGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: AMGSSCEIGQGLLSTVLQQMVMS*WASAIS
Trigger: AGAGATTGCAGAGGCCCAGCAGCTCATCACCATTTG...CTGAAGAACTGTGGACAGAAGTCCCTGGCCTATCTCACAGCTGCTACCCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCTGTACGCAGCACCAGGATCATGTGCACAGGCTGCAGGTTTGAGTGGGTGAAACAAATGGTGATGAGCTaGTGGGCCTCTGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: AVRSTRIMCTGCRFEWVKQMVMS*WASAIS
Trigger: AGAGATTGCAGAGGCCCAGCAGCTCATCACCATTTG...TTTCACCCACTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCTGCGTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp AGGGACTTCTGTCCACAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCGTGGGTGAAATAGGCTaGCATCTCACAGATGCGCTT +
Preference number: 4 (lower is better)
Translates to: RDFCPQFFRIRTRSDTSPVGEIG*HLTDAL
Trigger: AAGCGCATCTGTGAGATGGCAGCCTATTTCACCCAC...GGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTGTGGACAGAAGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGAGCACCAGGATCATGTaGACAGGCTGCAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLSTRIM*TGCRFE
Trigger: CTCAAACCTGCAGCCTGTGCACATGATCCTGGTGCT...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGATTAGAGACGGGGTGTTaGCATGTTGGCCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGLETGC*HVGQAG
Trigger: ACCTGCCTGGCCAACATGGCAACACCCCGTCTCTAA...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GTCTGTTGGGCCACCTCAGGCTTGGGCCCGAGTTCTAGTAGGCGCCGAGCAAAGAGGCGCATGCTACCATaGCAGGCTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: VCWATSGLGPSSSRRRAKRRMLP*QANFYI
Trigger: AATATAAAAATTAGCCTGGCATGGTAGCATGCGCCT...CTTTGCTCGGCGCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCCAACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp ACCCACAATGTACTCACGGCAAATGGTGATGAGCTGCTGGGCCTCTGCAATCTCTTCAAGCGATTCTCATaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: THNVLTANGDELLGLCNLFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCATGAGAATCGCTTGAA...GAGATTGCAGAGGCCCAGCAGCTCATCACCATTTGCCGTGAGTACATTGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR GCA 90 bp GCCCACAGCTGGTACACCATTCTTCAGCCCTGCATCCTTCCAGTTGCGATTAGGCTTTGGTGGGGTGCCTaGATGGGTGAACAAGAACAT +
Preference number: 4 (lower is better)
Translates to: AHSWYTILQPCILPVAIRLWWGA*MGEQEH
Trigger: ATGTTCTTGTTCACCCATGCAGGCACCCCACCAAAG...CCTAATCGCAACTGGAAGGATGCAGGGCTGAAGAATGGTGTACCAGCTGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649963.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGAGTTCCACACTCGGATaGTCTGATCATCGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLSSTLG*SDHRRH
Trigger: GTGCCTCCGATGATCAGACCATCCGAGTGTGGAACT...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000648805.1
ENST00000649231.1
ENST00000649787.1
ENST00000649963.1
CDS-3UTR CCA 90 bp CAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCAGTTCCACACTCGGATaGTCTGATCATCGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QWHDRCRWLEQLGIRVNVSSTLG*SDHRRH
Trigger: GTGCCTCCGATGATCAGACCATCCGAGTGTGGAACT...GACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
CDS-3UTR CCA 90 bp CATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTAGGGTCAATGTCTGGGATAGTTCCACACTCGGATaGTCTGATCATCGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HDRCRWLEQLGIRVNVWDSSTLG*SDHRRH
Trigger: GTGCCTCCGATGATCAGACCATCCGAGTGTGGAACT...ATCCCAGACATTGACCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
CDS-3UTR CCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGACAAACGCGCACAGTCTaGTCCAGGCTGGCTGATACT +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGQTRTV*SRLADT
Trigger: AGTATCAGCCAGCCTGGACCAGACTGTGCGCGTTTG...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGAAGGGGCATAGTGGGGTaGAAGGCAGCCCAGTTTACT +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGRGIVG*KAAQFT
Trigger: AGTAAACTGGGCTGCCTTCCACCCCACTATGCCCCT...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATCTGAGGATCAACTCTTaGCGAGGGTGGAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDLRINS*RGWKTA
Trigger: TGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAG...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CTCCTCAAATTTGCCAACTGTGGTGAGCTGGTAGCACAGCTGCAACCGTTGGATCTGAGGATCAACTCTTaGCGAGGGTGGAAGACGGCA +
Preference number: 4 (lower is better)
Translates to: LLKFANCGELVAQLQPLDLRINS*RGWKTA
Trigger: TGCCGTCTTCCACCCTCGCCAAGAGTTGATCCTCAG...ATCCAACGGTTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAATTTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCATGAACAGCATAGGCTaGCCGTTCCCGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SVGFFSQADRIFRVCWATMNSIG*PFPFQL
Trigger: AAGCTGGAACGGGAACGGCCAGCCTATGCTGTTCAT...GGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGGGCGCATCAGGATTCTaGGAGTCAGCATCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLGASGF*ESASLG
Trigger: CCCTAAAGATGCTGACTCCCAGAATCCTGATGCGCC...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGATGTGATGGCGCATCAGGATTCTaGGAGTCAGCATCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: LGHEGAAWLFRKSLPGCDGASGF*ESASLG
Trigger: CCCTAAAGATGCTGACTCCCAGAATCCTGATGCGCC...ATCACATCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTGGACACTTTTCTACTGGCTTTCCACGGTAGATGGGCCGATATGATGCAGCACGTTCGAATGATCCCGTaGTCCCCAGTGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: VDTFLLAFHGRWADMMQHVRMIP*SPVVTA
Trigger: TGCTGTCACCACTGGGGACCACGGGATCATTCGAAC...GTGCTGCATCATATCGGCCCATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGAATTTCCACAATCTGGTaGTTCCCCTGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGISTIW*FPCSRA
Trigger: GGCCCTGCTGCAGGGGAACCACCAGATTGTGGAAAT...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATATTTCCACAATCTGGTaGTTCCCCTGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDISTIW*FPCSRA
Trigger: GGCCCTGCTGCAGGGGAACCACCAGATTGTGGAAAT...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CCAATTGGTATCCAATGGCATGATAGGTGCAGGTGGCTGGAGCAGCTTGGCATTATTTCCACAATCTGGTaGTTCCCCTGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PIGIQWHDRCRWLEQLGIISTIW*FPCSRA
Trigger: GGCCCTGCTGCAGGGGAACCACCAGATTGTGGAAAT...AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATGCCATTGGATACCAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGCACATTTCCACAATCTaGTGGTTCCCCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLHISTI*WFPCSR
Trigger: CCTGCTGCAGGGGAACCACCAGATTGTGGAAATGTG...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GGAATAGCAGGCCCCACTGAGTGGACACTTTTCTACTGGCTTTCCACGGTAGATATAGGTGCAGGTGGCTaGAGCAGCTTGGCATTAGGG +
Preference number: 4 (lower is better)
Translates to: GIAGPTEWTLFYWLSTVDIGAGG*SSLALG
Trigger: CCCTAATGCCAAGCTGCTCCAGCCACCTGCACCTAT...ATCTACCGTGGAAAGCCAGTAGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGCATGATAGGTGCAGGTaGCTGGAGCAGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLHDRCR*LEQLGI
Trigger: AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GCATCTGTGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCCATGATAGGTGCAGGTaGCTGGAGCAGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: ASVGFFSQADRIFRVCWAHDRCR*LEQLGI
Trigger: AATGCCAAGCTGCTCCAGCCACCTGCACCTATCATG...GGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCACAGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GTTTTAGGGTACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGCATGAAGGAGCCGCATaGCTGTTTCGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VLGYREPDLKSSCRGKVLHEGAA*LFRKSL
Trigger: CAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATG...CAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTACCCTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TGGGATTCTTCTCACAGGCAGACAGGATTTTTCGGGTCTGTTGGGCCACCTCAGCATGAAGGAGCCGCATaGCTGTTTCGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: WDSSHRQTGFFGSVGPPQHEGAA*LFRKSL
Trigger: CAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATG...CTGAGGTGGCCCAACAGACCCGAAAAATCCTGTCTGCCTGTGAGAAGAATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TACAGAGAGCCAGATCTGAAGAGTAGCTGCAGGGGGAAGGTGCTGTTAGAAGGACTTCAGGCCCACAGCTaGTACACCATTCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: YREPDLKSSCRGKVLLEGLQAHS*YTILQP
Trigger: GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAG...TCCTTCTAACAGCACCTTCCCCCTGCAGCTACTCTTCAGATCTGGCTCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000241704.8
ENST00000368069.7
ENST00000647683.1
ENST00000647799.1
ENST00000648280.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649676.1
ENST00000649787.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TTCTGTCCACAGTTCTTCAGGATCCGCACACGCTCTGACACATCACCCAGGTATCTTCAGGCCCACAGCTaGTACACCATTCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: FCPQFFRIRTRSDTSPRYLQAHS*YTILQP
Trigger: GGGCTGAAGAATGGTGTACCAGCTGTGGGCCTGAAG...ATACCTGGGTGATGTGTCAGAGCGTGTGCGGATCCTGAAGAACTGTGGACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp CCCCTACTTGGTCATGAAGGAGCCGCATGGCTGTTTCGAAAGAGCCTGCCAGGACACAGCTGCAACCGTTaGATGAGGTCATTAAGCTTC +
Preference number: 4 (lower is better)
Translates to: PLLGHEGAAWLFRKSLPGHSCNR*MRSLSF
Trigger: GAAGCTTAATGACCTCATCCAACGGTTGCAGCTGTG...TCCTGGCAGGCTCTTTCGAAACAGCCATGCGGCTCCTTCATGACCAAGTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp TCAAATGTCTCCTTTAGGCTCTCAGCTTCTTCATCTAAGCCATGGGTAGCAGCTGGGCCACCTCAGGCTTaGGCCCGAGTTCTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SNVSFRLSASSSKPWVAAGPPQA*ARVLVG
Trigger: GCCTACTAGAACTCGGGCCCAAGCCTGAGGTGGCCC...AGCTGCTACCCATGGCTTAGATGAAGAAGCTGAGAGCCTAAAGGAGACATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000647799.1
ENST00000648501.1
ENST00000648805.1
ENST00000649231.1
ENST00000649963.1
ENST00000650154.1
CDS-3UTR CCA 90 bp GAGTTGGACTTGTTCCCTTGGTTGGGGGCACAAAGAAACCATCTTCAGCCCCACGCTGGTAGGCATCTGTaGGATTCTTCTCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: ELDLFPWLGAQRNHLQPHAGRHL*DSSHRQ