Pregenerated sensors for COP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000143207Ensembl transcript IDs: ENST00000308769.12, ENST00000459744.5, ENST00000461830.6, ENST00000474194.1, ENST00000491600.5, ENST00000649803.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATTGGCCAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTaGAATATCTGCCACCTGTGGCCATTGGTGCTACTCACTGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: TLAKSRLSWSVPNQS*NICHLWPLVLLTEW Trigger: CCACTCAGTGAGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTGGCCAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCAGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCACCTGTGGCCATTaGTGCTACTCACTGAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ASSCFFFCTSNSNIRLTLATCGH*CYSLSG Trigger: ACCACTCAGTGAGTAGCACCAATGGCCACAGGTGGC...CAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACTGGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| 3UTR-3UTR GCA 90 bp | AGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAAACCTGTGGCCATTGGTaGTACTCACTGAGTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SCFFFCTSNSNIRLTLAKTCGHW*YSLSGP Trigger: TGGACCACTCAGTGAGTAGCACCAATGGCCACAGGT...TTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| 3UTR-3UTR TCA 90 bp | AGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAATCCAAGTCTTCAAAATaGGCAGTAAGTCGTTTTCGT | + |
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Preference number: 2 (lower is better) Translates to: SCFFFCTSNSNIRLTLAKSKSSK*AVSRFR Trigger: ACGAAAACGACTTACTGCTCATTTTGAAGACTTGGA...TTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649803.1 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCAGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGAAATCAAGGTTATCTTaGTCAGTTCCCAACCAATCT | + |
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Preference number: 2 (lower is better) Translates to: ASSCFFFCTSNSNIRLTLKSRLS*SVPNQS Trigger: AGATTGGTTGGGAACTGACCAAGATAACCTTGATTT...CAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACTGGAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| 3UTR-3UTR CAA 90 bp | AGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAAAGTTCCCAACCAATCTaGAAATATCTGCCACCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SCFFFCTSNSNIRLTLAKSSQPI*KYLPPV Trigger: CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACT...TTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| 3UTR-3UTR CAA 90 bp | GCTTCCAGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGCAAATCAAGGTTATCTaGGTCAGTTCCCAACCAATC | + |
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Preference number: 3 (lower is better) Translates to: ASSCFFFCTSNSNIRLTLQIKVI*VSSQPI Trigger: GATTGGTTGGGAACTGACCAAGATAACCTTGATTTG...CAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACTGGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAATCAAGGAGCTGTGGCCACATTTaGTCATGTATGCTTCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: FFFCTSNSNIRLTLAKSRSCGHI*SCMLLQ Trigger: TTGAAGAAGCATACATGACAAAATGTGGCCACAGCT...CCTTGATTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | CTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCCTGGCCGCGCAGCTGTaGCGGGACAGGCCCGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LGQFPTNLEISATCGHWCLAAQL*RDRPVD Trigger: GTCCACGGGCCTGTCCCGGCACAGCTGCGCGGCCAG...GCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474194.1 |
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| CDS-3UTR CCA 90 bp | CTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCCTCCTACGCCGGCGCTaGGCCTGGCCGCGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LGQFPTNLEISATCGHWCLLRRR*AWPRSC Trigger: ACAGCTGCGCGGCCAGGCCCAGCGCCGGCGTAGGAG...GCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474194.1 ENST00000649803.1 |
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| CDS-3UTR CCA 90 bp | ACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTCACTGAGTGGTCTCCTACGCCGGCGCTaGGCCTGGCCGCGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TNLEISATCGHWCYSLSGLLRRR*AWPRSC Trigger: ACAGCTGCGCGGCCAGGCCCAGCGCCGGCGTAGGAG...ACCACTCAGTGAGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474194.1 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | GGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATCTAGGCTGGAGCTGCTaGCTCCTACGCCGGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GYLGQFPTNLEISATCGHLGWSC*LLRRRW Trigger: CCAGCGCCGGCGTAGGAGGCAGCAGCTCCAGCCTAG...ATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474194.1 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | ACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTCACTGAGTGGTGAGGTCGCTTCCTGCTaGCGCTGCCTAGGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TNLEISATCGHWCYSLSGEVASC*RCLGWS Trigger: GCTCCAGCCTAGGCAGCGGCAGCAGGAAGCGACCTC...ACCACTCAGTGAGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474194.1 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | ATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCGGACACCAGCGCTaGCGCCGAAACCGCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: IKVILVSSQPILKYLPPVAGHQR*RRNRHG Trigger: TCCGTGGCGGTTTCGGCGGCAGCGCTGGTGTCCGGC...CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474194.1 |
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| CDS-3UTR GCA 90 bp | ATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGCTAGGCTGGAGCTGCTaGCTCCTACGCCGGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IKVILVSSQPILKYLPPVLGWSC*LLRRRW Trigger: CCAGCGCCGGCGTAGGAGGCAGCAGCTCCAGCCTAG...CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474194.1 ENST00000649803.1 |
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| CDS-3UTR TCA 90 bp | CCAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCGGCTACCAGACATCGTaGCTCCCTCCCCTCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: PNQGYLGQFPTNLEISATGYQTS*LPPLQP Trigger: CGGCTGGAGGGGAGGGAGTCACGATGTCTGGTAGCC...GGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474194.1 |
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| CDS-3UTR GCA 90 bp | ATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGGAGAGGTCGCTTCCTaGTGCCGCTGCCTAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IKVILVSSQPILKYLPPVGEVAS*CRCLGW Trigger: CCAGCCTAGGCAGCGGCAGCAGGAAGCGACCTCTCC...CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474194.1 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | GCTTCCAGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGTGCCTAGGCTGGAGCTaGTGCCTCCTACGCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: ASSCFFFCTSNSNIRLTLCLGWS*CLLRRR Trigger: GCGCCGGCGTAGGAGGCAGCAGCTCCAGCCTAGGCA...CAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACTGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474194.1 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | GGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACACCTGTGGCCATTGGTaGTACTCACTGAGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GQFPTNLEISATCGHWCYTCGHW*YSLSGP Trigger: TGGACCACTCAGTGAGTAGCACCAATGGCCACAGGT...GTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | GCTTCCAGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGGAGAGGTCGCTTCCTaGTGCCGCTGCCTAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ASSCFFFCTSNSNIRLTLGEVAS*CRCLGW Trigger: CCAGCCTAGGCAGCGGCAGCAGGAAGCGACCTCTCC...CAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACTGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474194.1 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | GTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTACCTGTGGCCATTGGTaGTACTCACTGAGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VSSQPILKYLPPVAIGATTCGHW*YSLSGP Trigger: TGGACCACTCAGTGAGTAGCACCAATGGCCACAGGT...AGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | ACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTCACTGAGTGGTACCTGTGGCCATTGGTaGTACTCACTGAGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TNLEISATCGHWCYSLSGTCGHW*YSLSGP Trigger: TGGACCACTCAGTGAGTAGCACCAATGGCCACAGGT...ACCACTCAGTGAGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CCA 90 bp | GGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATGCCACCTGTGGCCATTaGTGCTACTCACTGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GYLGQFPTNLEISATCGHATCGH*CYSLSG Trigger: ACCACTCAGTGAGTAGCACCAATGGCCACAGGTGGC...ATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | AGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAAGAGGTCGCTTCCTGCTaGCGCTGCCTAGGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SCFFFCTSNSNIRLTLAKEVASC*RCLGWS Trigger: GCTCCAGCCTAGGCAGCGGCAGCAGGAAGCGACCTC...TTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474194.1 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | AAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCAGGAGCTCGAATGCCTaGAAACGCTCGATTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KVILVSSQPILKYLPPVARSSNA*KRSIPS Trigger: AGAGGGAATCGAGCGTTTGCAGGCATTCGAGCTCCT...GGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491600.5 |
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| CDS-3UTR CCA 90 bp | CCAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCGCCACCTGTGGCCATTaGTGCTACTCACTGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PNQGYLGQFPTNLEISATATCGH*CYSLSG Trigger: ACCACTCAGTGAGTAGCACCAATGGCCACAGGTGGC...GGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CCA 90 bp | CCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTCACTGAGTAATATCTGCCACCTGTaGCCATTGGTGCTACTCACT | + |
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Preference number: 4 (lower is better) Translates to: PTNLEISATCGHWCYSLSNICHL*PLVLLT Trigger: AGTGAGTAGCACCAATGGCCACAGGTGGCAGATATT...ACTCAGTGAGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | ATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGAACCAGGAGCTCGAATaGCTGCAAACGCTCGATTCC | + |
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Preference number: 4 (lower is better) Translates to: IKVILVSSQPILKYLPPVNQELE*LQTLDS Trigger: GGAATCGAGCGTTTGCAGGCATTCGAGCTCCTGGTT...CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491600.5 |
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| CDS-3UTR CCA 90 bp | CAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGCCACCTGTGGCCATTaGTGCTACTCACTGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: QIKVILVSSQPILKYLPPATCGH*CYSLSG Trigger: ACCACTCAGTGAGTAGCACCAATGGCCACAGGTGGC...AGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | CCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTCACTGAGTTTCATACGAAGTCGTTaGTTTTGTCCTCGTAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PTNLEISATCGHWCYSLSFIRSR*FCPRRS Trigger: ACTCCTACGAGGACAAAAGCAACGACTTCGTATGAA...ACTCAGTGAGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | ATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGTTATTATCCCCACCCTaGCTCGCTACTCCAACATTC | + |
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Preference number: 4 (lower is better) Translates to: IKVILVSSQPILKYLPPVLLSPP*LATPTF Trigger: GAATGTTGGAGTAGCGAGGCAGGGTGGGGATAATAA...CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491600.5 |
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| CDS-3UTR CCA 90 bp | ATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGAATATCTGCCACCTGTaGCCATTGGTGCTACTCACT | + |
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Preference number: 4 (lower is better) Translates to: IKVILVSSQPILKYLPPVNICHL*PLVLLT Trigger: AGTGAGTAGCACCAATGGCCACAGGTGGCAGATATT...CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| 3UTR CAA 72 bp | CAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTaGAAATATCTGCCACCTGTGGCCATTGGTGCTACT | + |
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Preference number: 4 (lower is better) Translates to: QIKVILVSSQPI*KYLPPVAIGAT Trigger: AGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR TCA 90 bp | CCAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCAGTTCGACTGTCATCTaGGATACGAGACATCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PNQGYLGQFPTNLEISATSSTVI*DTRHPC Trigger: ACAAGGATGTCTCGTATCTCAGATGACAGTCGAACT...GGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649803.1 |
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| CDS-3UTR CCA 90 bp | CCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTCACTGAGTAAATCAAGGTTATCTTaGTCAGTTCCCAACCAATCT | + |
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Preference number: 4 (lower is better) Translates to: PTNLEISATCGHWCYSLSKSRLS*SVPNQS Trigger: AGATTGGTTGGGAACTGACCAAGATAACCTTGATTT...ACTCAGTGAGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR GCA 90 bp | GCTTCCAGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGGCATACGAAGTCGTTaGTTTTGTCCTCGTAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: ASSCFFFCTSNSNIRLTLGIRSR*FCPRRS Trigger: ACTCCTACGAGGACAAAAGCAACGACTTCGTATGCC...CAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACTGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474194.1 |
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| CDS-3UTR CCA 90 bp | CAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTTCATATCAAAGCAGATaGGGCATACGAAGTCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QIKVILVSSQPILKYLPPSYQSR*GIRSRC Trigger: GCAACGACTTCGTATGCCCCATCTGCTTTGATATGA...AGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474194.1 |
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| CDS-3UTR CCA 90 bp | GGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATAAATCAAGGTTATCTTaGTCAGTTCCCAACCAATCT | + |
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Preference number: 4 (lower is better) Translates to: GYLGQFPTNLEISATCGHKSRLS*SVPNQS Trigger: AGATTGGTTGGGAACTGACCAAGATAACCTTGATTT...ATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CCA 90 bp | AAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCCATTCACAAAAGCTGTaGCCACATTTTGTCATGTAT | + |
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Preference number: 4 (lower is better) Translates to: KVILVSSQPILKYLPPVAHSQKL*PHFVMY Trigger: ATACATGACAAAATGTGGCCACAGCTTTTGTGAATG...GGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474194.1 |
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| CDS-3UTR GCA 90 bp | ATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGTCTTGATGCTAACGTaGTATTATACCAAGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: IKVILVSSQPILKYLPPVVLMLT*YYTKAV Trigger: AACAGCCTTGGTATAATAGCACGTTAGCATCAAGAC...CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649803.1 |
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| CDS-3UTR CCA 90 bp | AGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAAAATATCTGCCACCTGTaGCCATTGGTGCTACTCACT | + |
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Preference number: 4 (lower is better) Translates to: SCFFFCTSNSNIRLTLAKNICHL*PLVLLT Trigger: AGTGAGTAGCACCAATGGCCACAGGTGGCAGATATT...TTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| 3UTR CAA 72 bp | TTCTTCTGCACTAGTAACTCCAACATAAGATTGACATaGGCCAAATCAAGGTTATCTTGGTCAGTTCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: FFCTSNSNIRLT*AKSRLSWSVPN Trigger: GTTGGGAACTGACCAAGATAACCTTGATTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR TCA 90 bp | TTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAATCAAGGTCCAAGTCTTCAAAATaGGCAGTAAGTCGTTTTCGT | + |
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Preference number: 4 (lower is better) Translates to: FFFCTSNSNIRLTLAKSRSKSSK*AVSRFR Trigger: ACGAAAACGACTTACTGCTCATTTTGAAGACTTGGA...CCTTGATTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649803.1 |
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| CDS-3UTR CCA 90 bp | AGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAATCATATCAAAGCAGATaGGGCTCTTTATTATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SCFFFCTSNSNIRLTLAKSYQSR*GSLLSP Trigger: TGGGGATAATAAAGAGCCCCATCTGCTTTGATATGA...TTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491600.5 |
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| CDS-3UTR CAA 90 bp | AAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCTGCCACCTGTGGCCATaGGTGCTACTCACTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: KVILVSSQPILKYLPPVACHLWP*VLLTEW Trigger: CCACTCAGTGAGTAGCACCAATGGCCACAGGTGGCA...GGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | ATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGTGCCACCTGTGGCCATaGGTGCTACTCACTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: IKVILVSSQPILKYLPPVCHLWP*VLLTEW Trigger: CCACTCAGTGAGTAGCACCAATGGCCACAGGTGGCA...CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | CCAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGCCACCTGTGGCCATaGGTGCTACTCACTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: PNQGYLGQFPTNLEISATCHLWP*VLLTEW Trigger: CCACTCAGTGAGTAGCACCAATGGCCACAGGTGGCA...GGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | ACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTCACTGAGTGGTAGTTCCCAACCAATCTaGAAATATCTGCCACCTGTG | + |
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Preference number: 5 (lower is better) Translates to: TNLEISATCGHWCYSLSGSSQPI*KYLPPV Trigger: CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACT...ACCACTCAGTGAGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | GGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACCAAATCAAGGTTATCTaGGTCAGTTCCCAACCAATC | + |
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Preference number: 5 (lower is better) Translates to: GQFPTNLEISATCGHWCYQIKVI*VSSQPI Trigger: GATTGGTTGGGAACTGACCAAGATAACCTTGATTTG...GTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | AAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCAGTTCCCAACCAATCTaGAAATATCTGCCACCTGTG | + |
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Preference number: 5 (lower is better) Translates to: KVILVSSQPILKYLPPVASSQPI*KYLPPV Trigger: CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACT...GGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | GTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTCAAATCAAGGTTATCTaGGTCAGTTCCCAACCAATC | + |
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Preference number: 5 (lower is better) Translates to: VSSQPILKYLPPVAIGATQIKVI*VSSQPI Trigger: GATTGGTTGGGAACTGACCAAGATAACCTTGATTTG...AGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | AGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATTGGTGCTACTCACCTGGATCTGTTCCAGTaGCTCTCTCTTATTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SSQPILKYLPPVAIGATHLDLFQ*LSLISS Trigger: AGAAGAAATAAGAGAGAGCAACTGGAACAGATCCAG...GTGAGTAGCACCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | GGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCTGTGGCCATCAAATCAAGGTTATCTaGGTCAGTTCCCAACCAATC | + |
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Preference number: 5 (lower is better) Translates to: GYLGQFPTNLEISATCGHQIKVI*VSSQPI Trigger: GATTGGTTGGGAACTGACCAAGATAACCTTGATTTG...ATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS TCA 90 bp | ACATTGGCCAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTaGAATATCTGCCACCTGTGGCCATTTGAGTGGTCCAATTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: TLAKSRLSWSVPNQS*NICHLWPFEWSNLN Trigger: GTTCAAATTGGACCACTCAAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTGGCCAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308769.12 |
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| CDS-3UTR CAA 90 bp | CCAAATCAAGGTTATCTTGGTCAGTTCCCAACCAATCTTGAAATATCTGCCACCCTGGATCTGTTCCAGTaGCTCTCTCTTATTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PNQGYLGQFPTNLEISATLDLFQ*LSLISS Trigger: AGAAGAAATAAGAGAGAGCAACTGGAACAGATCCAG...GGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | GCTTCCAGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGAGTTCCCAACCAATCTaGAAATATCTGCCACCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ASSCFFFCTSNSNIRLTLSSQPI*KYLPPV Trigger: CACAGGTGGCAGATATTTCAAGATTGGTTGGGAACT...CAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACTGGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | TTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAATCAAGGACCACAGCTTCACTTTaGCATCATCAGAACCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: FFFCTSNSNIRLTLAKSRTTASL*HHQNLK Trigger: CTTCAGGTTCTGATGATGCAAAAGTGAAGCTGTGGT...CCTTGATTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | GCTTCCAGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGAGCTGTGGCCACATTTaGTCATGTATGCTTCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: ASSCFFFCTSNSNIRLTLSCGHI*SCMLLQ Trigger: TTGAAGAAGCATACATGACAAAATGTGGCCACAGCT...CAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACTGGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | AGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAAAGCTGTGGCCACATTTaGTCATGTATGCTTCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: SCFFFCTSNSNIRLTLAKSCGHI*SCMLLQ Trigger: TTGAAGAAGCATACATGACAAAATGTGGCCACAGCT...TTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS-3UTR CAA 90 bp | AGTTGTTTCTTCTTCTGCACTAGTAACTCCAACATAAGATTGACATTGGCCAAACTGGATCTGTTCCAGTaGCTCTCTCTTATTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SCFFFCTSNSNIRLTLAKLDLFQ*LSLISS Trigger: AGAAGAAATAAGAGAGAGCAACTGGAACAGATCCAG...TTTGGCCAATGTCAATCTTATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474194.1 ENST00000491600.5 ENST00000649803.1 |
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| CDS GCA 90 bp | GAATCAATAATACTAATAATAAGTATTCCATTGACAAAGATCCTGTaGATATCAGAACTGAATTCAAGGCTGTGTGATGGAGAAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: ESIILIISIPLTKIL*ISELNSRLCDGEGA Trigger: AGCTCCTTCTCCATCACACAGCCTTGAATTCAGTTCTGATATGCACAGGATCTTTGTCAATGGAATACTTATTATTAGTATTATTGATTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000459744.5 |
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| CDS TCA 72 bp | GTTTGCTGGTTAAGAATGCAGGCTCTGGAGCCAGACTaGGTTAGCACGTTCATCTGTCGGCCAGGCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VCWLRMQALEPD*VSTFICRPGVV Trigger: CACCACGCCTGGCCGACAGATGAACGTGCTAACTCAGTCTGGCTCCAGAGCCTGCATTCTTAACCAGCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461830.6 |
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| CDS TCA 72 bp | ATATACTCCAATATTATAGTTTACATACACCCTCAGTaGCATTACAAGCTGGTAGGTAAGTACAGAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: IYSNIIVYIHPQ*HYKLVGKYRAL Trigger: CAGAGCTCTGTACTTACCTACCAGCTTGTAATGTCACTGAGGGTGTATGTAAACTATAATATTGGAGTATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461830.6 |
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