RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COMT (Homo sapiens)

Ensembl gene IDs: ENSG00000093010

Ensembl transcript IDs: ENST00000207636.9, ENST00000361682.11, ENST00000403184.5, ENST00000403710.5, ENST00000406520.7, ENST00000407537.5, ENST00000412786.5, ENST00000428707.2, ENST00000449653.5, ENST00000467943.5, ENST00000493893.1, ENST00000676678.1, ENST00000677397.1, ENST00000677470.1, ENST00000677564.1, ENST00000677675.1, ENST00000678240.1, ENST00000678255.1, ENST00000678769.1, ENST00000678868.1, ENST00000678945.1

Found 1173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTaGGCGTCTGGGGCAGGGCCCTGGGTGGAGGTGGTCCCAGGTGCC +
Preference number: 1 (lower is better)
Translates to: SGLAQVAGFSLVSGL*ASGAGPWVEVVPGA
Trigger: GGCACCTGGGACCACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR CCA 90 bp GGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTaGGTGGAGGTGGTCCCAGGTGCCCATCTGCTGTGTCCTGCAGAG +
Preference number: 1 (lower is better)
Translates to: GFSLVSGLCASGAGP*VEVVPGAHLLCPAE
Trigger: CTCTGCAGGACACAGCAGATGGGCACCTGGGACCACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR GCA 90 bp GACCCCACATGCCTCTGGGATGGGCCTGGAGAGTCCCACAGGGCTTaGAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATG +
Preference number: 1 (lower is better)
Translates to: DPTCLWDGPGESHRA*SCPGGGWRSFPACM
Trigger: CATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGGCCCATCCCAGAGGCATGTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 90 bp GGGCCTGGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTGGGTaGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAAGCAGGGGGCT +
Preference number: 1 (lower is better)
Translates to: GPGESHRACSCPGGG*RSFPACMLQRKQGA
Trigger: AGCCCCCTGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR TCA 90 bp CTGCGGGGTCCACCTGTCCCCAGCGCCTGCTTGGTCAGAAAGGTGTaGATGCTGGCTGACTCCTCTTCGTTTCCCAGGCCGGCAGTCGTC +
Preference number: 1 (lower is better)
Translates to: LRGPPVPSACLVRKV*MLADSSSFPRPAVV
Trigger: GACGACTGCCGGCCTGGGAAACGAAGAGGAGTCAGCCAGCATTCACACCTTTCTGACCAAGCAGGCGCTGGGGACAGGTGGACCCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR TCA 90 bp GGCCTGGGAACTGGGCCCTTGGAGCCTCTGAGGTGGCTAGCAGTCTaGCCCCTTGGAGGAGATGGGGACAGCTCTAGGTGTAGGTGGGCA +
Preference number: 1 (lower is better)
Translates to: GLGTGPLEPLRWLAV*PLGGDGDSSRCRWA
Trigger: TGCCCACCTACACCTAGAGCTGTCCCCATCTCCTCCAAGGGGTCAGACTGCTAGCCACCTCAGAGGCTCCAAGGGCCCAGTTCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 90 bp GGATGGGCCTGGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTaGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: GWAWRVPQGLQLSWW*VAVVSSLYAAEKAG
Trigger: CCCTGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGGCCCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CCA 90 bp GTCCACCTGTCCCCAGCGCCTGCTTGGTCAGAAAGGTGTGAATGCTaGCTGACTCCTCTTCGTTTCCCAGGCCGGCAGTCGTCCCCATGG +
Preference number: 1 (lower is better)
Translates to: VHLSPAPAWSERCEC*LTPLRFPGRQSSPW
Trigger: CCATGGGGACGACTGCCGGCCTGGGAAACGAAGAGGAGTCAGCCAGCATTCACACCTTTCTGACCAAGCAGGCGCTGGGGACAGGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 90 bp CTGGGATGGGCCTGGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTaGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAAGCA +
Preference number: 1 (lower is better)
Translates to: LGWAWRVPQGLQLSW*WVAVVSSLYAAEKA
Trigger: TGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGGCCCATCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CCA 90 bp CCTCTGGGATGGGCCTGGAGAGTCCCACAGGGCTTGCAGCTGTCCTaGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAA +
Preference number: 1 (lower is better)
Translates to: PLGWAWRVPQGLQLS*WWVAVVSSLYAAEK
Trigger: TTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGGCCCATCCCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR GCA 90 bp GGCCAGGGAGGCAACTACAGGGATGCGGGAGCTGGTCTGAGCCATTaGCTCTTCTGTAAGCAAGGCCCAGTGGGGAGTAGGGAAGGAGAT +
Preference number: 1 (lower is better)
Translates to: GQGGNYRDAGAGLSH*LFCKQGPVGSREGD
Trigger: ATCTCCTTCCCTACTCCCCACTGGGCCTTGCTTACAGAAGAGGCAATGGCTCAGACCAGCTCCCGCATCCCTGTAGTTGCCTCCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR GCA 90 bp GATGGGGCCTCAGGAGGAAGATCTGCAGGAGACACATGCTTTCTTTaGACGAGCAGTGGCTTGCTTGGGGGAGAGCAGGCTGGGCCCAGA +
Preference number: 1 (lower is better)
Translates to: DGASGGRSAGDTCFL*TSSGLLGGEQAGPR
Trigger: TCTGGGCCCAGCCTGCTCTCCCCCAAGCAAGCCACTGCTCGTGCAAAGAAAGCATGTGTCTCCTGCAGATCTTCCTCCTGAGGCCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CCA 90 bp AAAGGAACTTTTTGCTTTCTGCCACTCAGGTCTGGCACAAGTGGCTaGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: KGTFCFLPLRSGTSG*LLPCVGPLRVWGRA
Trigger: GGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAAAGTTCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR GCA 90 bp CCCTGTATTCCAGGAACGATTGGTAGTGTGTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGA +
Preference number: 1 (lower is better)
Translates to: PCIPGTIGSVCTQSS*SRARVLGSLAHLGR
Trigger: TCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACACACTACCAATCGTTCCTGGAATACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR GCA 90 bp GGCCGTCCACCACCTCCCTGTATTCCAGGAACGATTGGTAGTGTGTaGACTCAAAGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTG +
Preference number: 1 (lower is better)
Translates to: GRPPPPCIPGTIGSV*TQSSCSRARVLGSL
Trigger: CAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACACACTACCAATCGTTCCTGGAATACAGGGAGGTGGTGGACGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR GCA 90 bp CAATTTGCAGGCAGGTGCCTTGAAACACTGGTATCCGACCCCACATaGCTCTGGGATGGGCCTGGAGAGTCCCACAGGGCTTGCAGCTGT +
Preference number: 1 (lower is better)
Translates to: QFAGRCLETLVSDPT*LWDGPGESHRACSC
Trigger: ACAGCTGCAAGCCCTGTGGGACTCTCCAGGCCCATCCCAGAGGCATGTGGGGTCGGATACCAGTGTTTCAAGGCACCTGCCTGCAAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR GCA 90 bp CCAGGAACTCAGGCCTATGAGGGAGAGGCACCCAAGGAGAGGGGTTaGTGGTATGGTCCCTGGAGACAATATTGGCCTGACCAGGGTGAC +
Preference number: 1 (lower is better)
Translates to: PGTQAYEGEAPKERG*WYGPWRQYWPDQGD
Trigger: GTCACCCTGGTCAGGCCAATATTGTCTCCAGGGACCATACCAGCAACCCCTCTCCTTGGGTGCCTCTCCCTCATAGGCCTGAGTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR GCA 90 bp AATGCTAGCTGGGTGAGTGGAAACAATGGGGCCCTCAACACCCAGTaGCAGGAACTCAGGCCTATGAGGGAGAGGCACCCAAGGAGAGGG +
Preference number: 1 (lower is better)
Translates to: NASWVSGNNGALNTQ*QELRPMRERHPRRG
Trigger: CCCTCTCCTTGGGTGCCTCTCCCTCATAGGCCTGAGTTCCTGGCACTGGGTGTTGAGGGCCCCATTGTTTCCACTCACCCAGCTAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR GCA 90 bp CTGCCCAGCGTGACTCCTGCAGGAAAGGACTGTACAAGACTTGGGTaGCACCTTCAGAACATGGGCCCCGTGAGGACAGGGACCTTTCTC +
Preference number: 1 (lower is better)
Translates to: LPSVTPAGKDCTRLG*HLQNMGPVRTGTFL
Trigger: GAGAAAGGTCCCTGTCCTCACGGGGCCCATGTTCTGAAGGTGGCACCCAAGTCTTGTACAGTCCTTTCCTGCAGGAGTCACGCTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 90 bp CTTGTCCACTTGGGCTCACTGGTCTGTCTATCCATAGGAGTGGGCTaGCTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTGG +
Preference number: 1 (lower is better)
Translates to: LVHLGSLVCLSIGVG*LGASQALSPGVESW
Trigger: CCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAGCCAGCCCACTCCTATGGATAGACAGACCAGTGAGCCCAAGTGGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 90 bp CAGCAAAGGAACTTTTTGCTTTCTGCCACTCAGGTCTGGCACAAGTaGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: QQRNFLLSATQVWHK*LASPLCRASARLGQ
Trigger: CTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAAAGTTCCTTTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR CCA 90 bp CTCAGGGTCCTCGCCAGTGGGGCTGGGTTGGGGGAATGCACAAGATaGGGCCTCAGGAGGAAGATCTGCAGGAGACACATGCTTTCTTTG +
Preference number: 1 (lower is better)
Translates to: LRVLASGAGLGECTR*GLRRKICRRHMLSL
Trigger: CAAAGAAAGCATGTGTCTCCTGCAGATCTTCCTCCTGAGGCCCCATCTTGTGCATTCCCCCAACCCAGCCCCACTGGCGAGGACCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CCA 90 bp AGAGTTCCTCTGCCTGGGTTCTGTGCAGAAGGAAGGAGTTGTTACTaGACACGCAGCCATAGGGCATGGCCCGTGGGGTCCACTATCGGG +
Preference number: 1 (lower is better)
Translates to: RVPLPGFCAEGRSCY*TRSHRAWPVGSTIG
Trigger: CCCGATAGTGGACCCCACGGGCCATGCCCTATGGCTGCGTGTCCAGTAACAACTCCTTCCTTCTGCACAGAACCCAGGCAGAGGAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 90 bp GGAACTCAGGCCTATGAGGGAGAGGCACCCAAGGAGAGGGGTTGCTaGTATGGTCCCTGGAGACAATATTGGCCTGACCAGGGTGACCCT +
Preference number: 1 (lower is better)
Translates to: GTQAYEGEAPKERGC*YGPWRQYWPDQGDP
Trigger: AGGGTCACCCTGGTCAGGCCAATATTGTCTCCAGGGACCATACCAGCAACCCCTCTCCTTGGGTGCCTCTCCCTCATAGGCCTGAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR TCA 90 bp GGGCTTTCATGTGACAGTATGGACACCACACGGCTGCAAGGTCAGTaGGGTCAGGGGACAGCCCCAAGGTCCGGAGTTGAGCAGGAAGTA +
Preference number: 1 (lower is better)
Translates to: GLSCDSMDTTRLQGQ*GQGTAPRSGVEQEV
Trigger: TACTTCCTGCTCAACTCCGGACCTTGGGGCTGTCCCCTGACCTCACTGACCTTGCAGCCGTGTGGTGTCCATACTGTCACATGAAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR GCA 90 bp CTTGCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATaGTGCAGAGAAAGCAGGGGGCTTTCATGTGACAGTATGGACACC +
Preference number: 1 (lower is better)
Translates to: LAAVLVVGGGRFQPV*CRESRGLSCDSMDT
Trigger: GGTGTCCATACTGTCACATGAAAGCCCCCTGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CCA 90 bp AGGTGCCCATCTGCTGTGTCCTGCAGAGGCTCTGTTTCTGGTCCCTaGGTGGCCCCAAACTTGTCCACTTGGGCTCACTGGTCTGTCTAT +
Preference number: 1 (lower is better)
Translates to: RCPSAVSCRGSVSGP*VAPNLSTWAHWSVY
Trigger: ATAGACAGACCAGTGAGCCCAAGTGGACAAGTTTGGGGCCACCCAGGGACCAGAAACAGAGCCTCTGCAGGACACAGCAGATGGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 90 bp AGCCTGTATGCTGCAGAGAAAGCAGGGGGCTTTCATGTGACAGTATaGACACCACACGGCTGCAAGGTCAGTGAGGTCAGGGGACAGCCC +
Preference number: 1 (lower is better)
Translates to: SLYAAEKAGGFHVTV*TPHGCKVSEVRGQP
Trigger: GGGCTGTCCCCTGACCTCACTGACCTTGCAGCCGTGTGGTGTCCATACTGTCACATGAAAGCCCCCTGCTTTCTCTGCAGCATACAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CCA 90 bp CTTTCTGCCCAGCGTGACTCCTGCAGGAAAGGACTGTACAAGACTTaGGTGCCACCTTCAGAACATGGGCCCCGTGAGGACAGGGACCTT +
Preference number: 1 (lower is better)
Translates to: LSAQRDSCRKGLYKT*VPPSEHGPREDRDL
Trigger: AAGGTCCCTGTCCTCACGGGGCCCATGTTCTGAAGGTGGCACCCAAGTCTTGTACAGTCCTTTCCTGCAGGAGTCACGCTGGGCAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR GCA 90 bp GCTGGGTTGGGGGAATGCACAAGATGGGGCCTCAGGAGGAAGATCTaGAGGAGACACATGCTTTCTTTGCACGAGCAGTGGCTTGCTTGG +
Preference number: 1 (lower is better)
Translates to: AGLGECTRWGLRRKI*RRHMLSLHEQWLAW
Trigger: CCAAGCAAGCCACTGCTCGTGCAAAGAAAGCATGTGTCTCCTGCAGATCTTCCTCCTGAGGCCCCATCTTGTGCATTCCCCCAACCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR GCA 90 bp CTAGCCCCTGGGGCCAGGTTTCCACTTTCTGCCCAGCGTGACTCCTaGAGGAAAGGACTGTACAAGACTTGGGTGCCACCTTCAGAACAT +
Preference number: 1 (lower is better)
Translates to: LAPGARFPLSAQRDS*RKGLYKTWVPPSEH
Trigger: ATGTTCTGAAGGTGGCACCCAAGTCTTGTACAGTCCTTTCCTGCAGGAGTCACGCTGGGCAGAAAGTGGAAACCTGGCCCCAGGGGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR TCA 90 bp TCGTTTCCAGCCTGTATGCTGCAGAGAAAGCAGGGGGCTTTCATGTaGCAGTATGGACACCACACGGCTGCAAGGTCAGTGAGGTCAGGG +
Preference number: 1 (lower is better)
Translates to: SFPACMLQRKQGAFM*QYGHHTAARSVRSG
Trigger: CCCTGACCTCACTGACCTTGCAGCCGTGTGGTGTCCATACTGTCACATGAAAGCCCCCTGCTTTCTCTGCAGCATACAGGCTGGAAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR GCA 90 bp AATGCACAAGATGGGGCCTCAGGAGGAAGATCTGCAGGAGACACATaGTTTCTTTGCACGAGCAGTGGCTTGCTTGGGGGAGAGCAGGCT +
Preference number: 1 (lower is better)
Translates to: NAQDGASGGRSAGDT*FLCTSSGLLGGEQA
Trigger: AGCCTGCTCTCCCCCAAGCAAGCCACTGCTCGTGCAAAGAAAGCATGTGTCTCCTGCAGATCTTCCTCCTGAGGCCCCATCTTGTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CCA 90 bp TGTGCAGAAGGAAGGAGTTGTTACTGGACACGCAGCCATAGGGCATaGCCCGTGGGGTCCACTATCGGGAGAAACCTCATAGGATGCTTG +
Preference number: 1 (lower is better)
Translates to: CAEGRSCYWTRSHRA*PVGSTIGRNLIGCL
Trigger: CAAGCATCCTATGAGGTTTCTCCCGATAGTGGACCCCACGGGCCATGCCCTATGGCTGCGTGTCCAGTAACAACTCCTTCCTTCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR TCA 90 bp AGGACTGTACAAGACTTGGGTGCCACCTTCAGAACATGGGCCCCGTaGGGACAGGGACCTTTCTCTCATCAACTCCTGTATCCATCTCAG +
Preference number: 1 (lower is better)
Translates to: RTVQDLGATFRTWAP*GQGPFSHQLLYPSQ
Trigger: CTGAGATGGATACAGGAGTTGATGAGAGAAAGGTCCCTGTCCTCACGGGGCCCATGTTCTGAAGGTGGCACCCAAGTCTTGTACAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 90 bp AAATTAAAGCAGCAAAGGAACTTTTTGCTTTCTGCCACTCAGGTCTaGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGT +
Preference number: 1 (lower is better)
Translates to: KLKQQRNFLLSATQV*HKWLASPLCRASAR
Trigger: ACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAAAGTTCCTTTGCTGCTTTAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR GCA 90 bp AGGGCATGGCCCGTGGGGTCCACTATCGGGAGAAACCTCATAGGATaGTTGCCTATCTATGCTATCAGAAAAGGGTTTGCTTACATCACA +
Preference number: 1 (lower is better)
Translates to: RAWPVGSTIGRNLIG*LPIYAIRKGFAYIT
Trigger: TGTGATGTAAGCAAACCCTTTTCTGATAGCATAGATAGGCAAGCATCCTATGAGGTTTCTCCCGATAGTGGACCCCACGGGCCATGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 90 bp CTTACATCACATAAACAAGAAACCTTGAGAGGAAGTGTTTGCCTATaGGGAGGAAGGACCTACCAGGGCAAGGGACACCCCAGTCACCTT +
Preference number: 1 (lower is better)
Translates to: LTSHKQETLRGSVCL*GGRTYQGKGHPSHL
Trigger: AAGGTGACTGGGGTGTCCCTTGCCCTGGTAGGTCCTTCCTCCCCATAGGCAAACACTTCCTCTCAAGGTTTCTTGTTTATGTGATGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR GCA 90 bp GGGGTCCACTATCGGGAGAAACCTCATAGGATGCTTGCCTATCTATaGTATCAGAAAAGGGTTTGCTTACATCACATAAACAAGAAACCT +
Preference number: 1 (lower is better)
Translates to: GVHYREKPHRMLAYL*YQKRVCLHHINKKP
Trigger: AGGTTTCTTGTTTATGTGATGTAAGCAAACCCTTTTCTGATAGCATAGATAGGCAAGCATCCTATGAGGTTTCTCCCGATAGTGGACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR CCA 90 bp ACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCTGGCTGGGAGGCCAGTaGGCCAGGCGTGCCACCCAG +
Preference number: 2 (lower is better)
Translates to: TSGWLLPCVGPLRVWGRAWLGGQ*ARRATQ
Trigger: CTGGGTGGCACGCCTGGCCCACTGGCCTCCCAGCCA...GGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTTGGGGGAGAGCAGGCTaGGCCCAGAGCGGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSWGRAG*AQSGPS
Trigger: GGAAGGGCCGCTCTGGGCCCAGCCTGCTCTCCCCCA...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR GCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCCCAGAGGGGCTGGTaGTGCTGCGGGGTCCACCTG +
Preference number: 2 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAAQRGW*CCGVHL
Trigger: CAGGTGGACCCCGCAGCAGCACCAGCCCCTCTGGGC...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp ACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCTCCATAGGAGTGGGCTaGCTGGGGGCTAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: TSGWLLPCVGPLRVWGRASIGVG*LGASQA
Trigger: GGCCTGGCTAGCCCCCAGCCAGCCCACTCCTATGGA...GGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp CTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGTGCCCAGAGGGGCTGGTaGTGCTGCGGGGTCCACCTG +
Preference number: 2 (lower is better)
Translates to: LGASQALSPGVESWLGAGAQRGW*CCGVHL
Trigger: CAGGTGGACCCCGCAGCAGCACCAGCCCCTCTGGGC...ACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTGTCTGGTCTGGGGTGTaGACCCCACTTCTGCCACCC +
Preference number: 2 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSVWSGV*TPLLPP
Trigger: GGGTGGCAGAAGTGGGGTGCACACCCCAGACCAGAC...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR CCA 90 bp GGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCCTCCCAGACCTCAGGTaGTGCCTCCAGAGCGAGCTG +
Preference number: 2 (lower is better)
Translates to: GSEDSPTRCLASLGALRVLPDLR*CLQSEL
Trigger: CAGCTCGCTCTGGAGGCACCACCTGAGGTCTGGGAG...GACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CAA 90 bp TTGCTTTCTGCCACTCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTaGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LLSATQVWHKWLASP*CRASARLGQGPGWR
Trigger: CCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCGCCCAGAGGGGCTGGTaGTGCTGCGGGGTCCACCTG +
Preference number: 2 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAAQRGW*CCGVHL
Trigger: CAGGTGGACCCCGCAGCAGCACCAGCCCCTCTGGGC...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp TGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGGGCAGAAACCAGCACTaGATCCTCACTCATGGGCCA +
Preference number: 2 (lower is better)
Translates to: WLASPLCRASARLGQGPGGRNQH*ILTHGP
Trigger: TGGCCCATGAGTGAGGATGCAGTGCTGGTTTCTGCC...CCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCACCCATTTTGCACCTaGACAGGCAGCTGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGHPFCT*TGSWLP
Trigger: GGGGAGCCAGCTGCCTGTGCAGGTGCAAAATGGGTG...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR CCA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGTGGCTGGGAGGCCAGTaGGCCAGGCGTGCCACCCAG +
Preference number: 2 (lower is better)
Translates to: CCSSERLACQGAGLGRGVWLGGQ*ARRATQ
Trigger: CTGGGTGGCACGCCTGGCCCACTGGCCTCCCAGCCA...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp CAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGACCTCTGCACCACTGTaGCTGGGAGGCCAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: QVWHKWLASPLCRASARLTSAPL*LGGQWA
Trigger: GGCCCACTGGCCTCCCAGCCACAGTGGTGCAGAGGT...CAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCCCTGGTGTCTGGTCTaGGGTGTGCACCCCACTTCT +
Preference number: 2 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGPWCLV*GVHPTS
Trigger: AGAAGTGGGGTGCACACCCCAGACCAGACACCAGGG...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR CCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTCCAGTGGGGCTGGGTTaGGGGAATGCACAAGATGGG +
Preference number: 2 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSPVGLG*GNAQDG
Trigger: CCCATCTTGTGCATTCCCCCAACCCAGCCCCACTGG...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR GCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 2 (lower is better)
Translates to: RSTSGTFSTRLGERAREGRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR GCA 90 bp CGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGGGCAGTCAGGGCCCTaGTTCGCTGCCTGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: RRRSAGARLAPSVPGWVRGQSGP*FAAWAL
Trigger: AAGGGCCCAGGCAGCGAAGCAGGGCCCTGACTGCCC...TCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp CTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGTCCTGGGCCTGGGAACTaGGCCCTTGGAGCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: LGASQALSPGVESWLGAGPGPGN*ALGASE
Trigger: CTCAGAGGCTCCAAGGGCCCAGTTCCCAGGCCCAGG...ACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CAA 90 bp CCGCGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCACGTaGTCAGCCAGTAGCACTGTCCCCTTCCGCAGCAGGCCACATTCC +
Preference number: 2 (lower is better)
Translates to: PRTCARKSGAPGQIT*SASSTVPFRSRPHS
Trigger: GGAATGTGGCCTGCTGCGGAAGGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGAAGTCTGGCGCACCTaGGCAGATCACGTTGTCAGC +
Preference number: 2 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAEVWRT*ADHVVS
Trigger: GCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTC...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp CACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 2 (lower is better)
Translates to: HSPEPQKVSRSTSGTFSTPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...GGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCCAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 2 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCTGCCCCAAACCAGGATaGGTGCTCCTCACTAGGCCA +
Preference number: 2 (lower is better)
Translates to: RAQASAEVCFAFRTQPGACPKPG*VLLTRP
Trigger: TGGCCTAGTGAGGAGCACCCATCCTGGTTTGGGGCA...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CAA 90 bp AGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTaGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: REVSMSGRRPRPRCA*HLGHSPEPQKVSRS
Trigger: GCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR TCA 90 bp CAGGAACGATTGGTAGTGTGTGCACTCAAAGCAGCTGCTCCCGCGCACGTGTGCCGGCTGCAAGGTCAGTaGGGTCAGGGGACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: QERLVVCALKAAAPAHVCRLQGQ*GQGTAP
Trigger: TGGGGCTGTCCCCTGACCTCACTGACCTTGCAGCCG...GCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACACACTACCAATCGTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR GCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCATGGGGCTAACAGGTaGCCCTGGCCTAGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAHGANR*PWPSCR
Trigger: CCTGCAGCTAGGCCAGGGGCACCTGTTAGCCCCATG...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp GGTGGGTGTCCCAAGCCCAGTGGAGGATCACAGAGCCACTCAGTGTCGCTGACCCCAGACCTCAGGTGGTaGCTCCAGAGCGAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: GGCPKPSGGSQSHSVSLTPDLRW*LQSELC
Trigger: ACACAGCTCGCTCTGGAGGCACCACCTGAGGTCTGG...GGTCAGCGACACTGAGTGGCTCTGTGATCCTCCACTGGGCTTGGGACACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR CCA 90 bp GGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCTTCCGCAGCGAAGTCTGGCGCACCTaGGCAGATCACGTTGTCAGC +
Preference number: 2 (lower is better)
Translates to: GAPGQITLSASSTVPFRSEVWRT*ADHVVS
Trigger: GCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTC...GCTGCGGAAGGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCCCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 2 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCCTGCATCCTCACTCATaGGCCAGGGAGGCAACTACA +
Preference number: 2 (lower is better)
Translates to: RAQASAEVCFAFRTQPGALHPHS*AREATT
Trigger: TGTAGTTGCCTCCCTGGCCCATGAGTGAGGATGCAG...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCAGCTGTCCTGGTGGTaGGTGGCGGTCGTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: QFREVSMSGRRPRPRCALQLSWW*VAVVSS
Trigger: GCTGGAAACGACCGCCACCCACCACCAGGACAGCTG...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCGGCTTGCAGCTGTCCTaGTGGTGGGTGGCGGTCGTT +
Preference number: 2 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAGLQLS*WWVAVV
Trigger: AACGACCGCCACCCACCACCAGGACAGCTGCAAGCC...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp AGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCCCTCTGGGATGGGCCTaGAGAGTCCCACAGGGCTTG +
Preference number: 2 (lower is better)
Translates to: RKSGAPGQITLSASSTVPPLGWA*RVPQGL
Trigger: CAAGCCCTGTGGGACTCTCCAGGCCCATCCCAGAGG...GGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CAA 90 bp GTCTGTCTATCCATAGGAGTGGGCTGGCTGGGGGCTAGCCAGGCCTaGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGTCTCGGTGCA +
Preference number: 2 (lower is better)
Translates to: VCLSIGVGWLGASQA*SPGVESWLGAGLGA
Trigger: TGCACCGAGACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAGCCAGCCCACTCCTATGGATAGACAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR TCA 90 bp CAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGATGCGGGAGCTGGTCTaGGCCATTGCCTCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: QVWHKWLASPLCRASARLMRELV*AIASSV
Trigger: TACAGAAGAGGCAATGGCTCAGACCAGCTCCCGCAT...CAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR-3UTR TCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGCAGGGGGCTTTCATGTaGCAGTATGGACACCACACG +
Preference number: 2 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQQGAFM*QYGHHT
Trigger: CGTGTGGTGTCCATACTGTCACATGAAAGCCCCCTG...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR GCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCTGGTCTGAGCCATTaGCTCTTCTGTAAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAAGLSH*LFCKQG
Trigger: GCCTTGCTTACAGAAGAGGCAATGGCTCAGACCAGC...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp CTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGTAGGCAACTACAGGGATaGGGGAGCTGGTCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: LGASQALSPGVESWLGAGRQLQG*GSWSEP
Trigger: TGGCTCAGACCAGCTCCCGCATCCCTGTAGTTGCCT...ACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp TCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 2 (lower is better)
Translates to: SAEVCFAFRTQPGAAEGQPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...CTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp GCTTCTGCTAGTGCTGGTTCCTTCCAATCCGTGTCCAGGGTCCAGCGGCCCTACCCCACCCCATCTCCTTaGTCCTGTGCCGTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: ASASAGSFQSVSRVQRPYPTPSP*SCAVSA
Trigger: GGCAGAAACGGCACAGGACCAAGGAGATGGGGTGGG...GTAGGGCCGCTGGACCCTGGACACGGATTGGAAGGAACCAGCACTAGCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR CCA 90 bp GGAGTTGTTACTGGACACGCAGCCATAGGGCATGGCCCGTGGGGTCCACTATCGTGTCCTGGTGGTGGGTaGCGGTCGTTTCCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: GVVTGHAAIGHGPWGPLSCPGGG*RSFPAC
Trigger: ACAGGCTGGAAACGACCGCCACCCACCACCAGGACA...CGATAGTGGACCCCACGGGCCATGCCCTATGGCTGCGTGTCCAGTAACAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CAA 90 bp CAGAGGCTCTGTTTCTGGTCCCTGGGTGGCCCCAAACTTGTCCACTaGGGCTCACTGGTCTGTCTATCCATAGGAGTGGGCTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: QRLCFWSLGGPKLVH*GSLVCLSIGVGWLG
Trigger: CCCCAGCCAGCCCACTCCTATGGATAGACAGACCAGTGAGCCCAAGTGGACAAGTTTGGGGCCACCCAGGGACCAGAAACAGAGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CAA 90 bp AGATGGGGCCTCAGGAGGAAGATCTGCAGGAGACACATGCTTTCTTaGCACGAGCAGTGGCTTGCTTGGGGGAGAGCAGGCTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: RWGLRRKICRRHMLS*HEQWLAWGRAGWAQ
Trigger: CTGGGCCCAGCCTGCTCTCCCCCAAGCAAGCCACTGCTCGTGCAAAGAAAGCATGTGTCTCCTGCAGATCTTCCTCCTGAGGCCCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR TCA 90 bp GTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACAGGTGGCTAGCAGTCTaGCCCCTTGGAGGAGATGGG +
Preference number: 2 (lower is better)
Translates to: VCFAFRTQPGAAEGQQEHRWLAV*PLGGDG
Trigger: CCCATCTCCTCCAAGGGGTCAGACTGCTAGCCACCT...GTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR TCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTAGTGTGTCACTGATGTaGGGCTCCTTAAGCATCAGT +
Preference number: 2 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSSVSLM*GSLSIS
Trigger: ACTGATGCTTAAGGAGCCTCACATCAGTGACACACT...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR GCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 2 (lower is better)
Translates to: KVSRSTSGTFSTRLGERACTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR GCA 90 bp GGTCTGAGCCATTGCCTCTTCTGTAAGCAAGGCCCAGTGGGGAGTAGGGAAGGACATGGGGCTAACAGGTaGCCCTGGCCTAGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GLSHCLFCKQGPVGSREGHGANR*PWPSCR
Trigger: CCTGCAGCTAGGCCAGGGGCACCTGTTAGCCCCATG...TCCTTCCCTACTCCCCACTGGGCCTTGCTTACAGAAGAGGCAATGGCTCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTGACACATGCTTTCTTTaGACGAGCAGTGGCTTGCTT +
Preference number: 2 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGDTCFL*TSSGLL
Trigger: AAGCAAGCCACTGCTCGTGCAAAGAAAGCATGTGTC...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR GCA 90 bp ATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGTATCCGACCCCACATaGCTCTGGGATGGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: IQCCSSERLACQGAGLGRVSDPT*LWDGPG
Trigger: TCCAGGCCCATCCCAGAGGCATGTGGGGTCGGATAC...TCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR CCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 2 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 2 (lower is better)
Translates to: QFREVSMSGRRPRPRCALQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp CCAGGAACGATTGGTAGTGTGTGCACTCAAAGCAGCTGCTCCCGCGCACGTGTGTTGCAGCTGTCCTGGTaGTGGGTGGCGGTCGTTTCC +
Preference number: 2 (lower is better)
Translates to: PGTIGSVCTQSSCSRARVLQLSW*WVAVVS
Trigger: GGAAACGACCGCCACCCACCACCAGGACAGCTGCAA...CACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACACACTACCAATCGTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR TCA 90 bp CTAGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCCAAGGTCCGGAGTTaGGCAGGAAGTACCACCATG +
Preference number: 2 (lower is better)
Translates to: LGSLAHLGRSRCQPVALSPKVRS*AGSTTM
Trigger: CATGGTGGTACTTCCTGCTCAACTCCGGACCTTGGG...GGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR TCA 90 bp ACTCAGGCCTATGAGGGAGAGGCACCCAAGGAGAGGGGTTGCTGGTATGGTCCCCAGGGGGCTTTCATGTaGCAGTATGGACACCACACG +
Preference number: 2 (lower is better)
Translates to: TQAYEGEAPKERGCWYGPQGAFM*QYGHHT
Trigger: CGTGTGGTGTCCATACTGTCACATGAAAGCCCCCTG...GGGACCATACCAGCAACCCCTCTCCTTGGGTGCCTCTCCCTCATAGGCCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR GCA 90 bp ATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGATGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 2 (lower is better)
Translates to: IQCCSSERLACQGAGLGRCTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...TCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR GCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGACGATTGGTAGTGTGTaGACTCAAAGCAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQTIGSV*TQSSCS
Trigger: GGAGCAGCTGCTTTGAGTGCACACACTACCAATCGT...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR GCA 90 bp GCCCAGCTCCAGAAGACAGGTCTAACCTCATCCTCACCTGCCCAAAGTCCTGTGGTCCTGTGCCGTTTCTaGCCTGGTGTCTGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: AQLQKTGLTSSSPAQSPVVLCRF*PGVWSG
Trigger: CCCAGACCAGACACCAGGGCAGAAACGGCACAGGAC...CACAGGACTTTGGGCAGGTGAGGATGAGGTTAGACCTGTCTTCTGGAGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR GCA 90 bp GGAAGGAGTTGTTACTGGACACGCAGCCATAGGGCATGGCCCGTGGGGTCCACTCGTTTCCAGCCTGTATaGTGCAGAGAAAGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: GRSCYWTRSHRAWPVGSTRFQPV*CRESRG
Trigger: CCCCCTGCTTTCTCTGCAGCATACAGGCTGGAAACG...AGTGGACCCCACGGGCCATGCCCTATGGCTGCGTGTCCAGTAACAACTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR GCA 90 bp TCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCGTTTCCAGCCTGTATaGTGCAGAGAAAGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: SAEVCFAFRTQPGAAEGQRFQPV*CRESRG
Trigger: CCCCCTGCTTTCTCTGCAGCATACAGGCTGGAAACG...CTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp ATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGACAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 2 (lower is better)
Translates to: IQCCSSERLACQGAGLGRQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...TCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp GTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACCAGAGGCTCTGTTTCTaGTCCCTGGGTGGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: VCFAFRTQPGAAEGQQEHQRLCF*SLGGPK
Trigger: TTTGGGGCCACCCAGGGACCAGAAACAGAGCCTCTG...GTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp TTTTTGCTTTCTGCCACTCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTTCTGGGGCAGGGCCCTaGGTGGAGGTGGTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: FLLSATQVWHKWLASPLCSGAGP*VEVVPG
Trigger: ACCTGGGACCACCTCCACCCAGGGCCCTGCCCCAGA...ACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp GCCCAGCTCCAGAAGACAGGTCTAACCTCATCCTCACCTGCCCAAAGTCCTGTGGTGCCGTTTCTGCCCTaGTGTCTGGTCTGGGGTGTG +
Preference number: 2 (lower is better)
Translates to: AQLQKTGLTSSSPAQSPVVPFLP*CLVWGV
Trigger: CACACCCCAGACCAGACACCAGGGCAGAAACGGCAC...CACAGGACTTTGGGCAGGTGAGGATGAGGTTAGACCTGTCTTCTGGAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR GCA 90 bp GTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGCCTCGGCCGAGGTGTaGTTTGCATTTAGGACACAG +
Preference number: 2 (lower is better)
Translates to: VCFAFRTQPGAAEGQQEHASAEV*FAFRTQ
Trigger: CTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC...GTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp GTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACTCTGTTTCTGGTCCCTaGGTGGCCCCAAACTTGTCC +
Preference number: 2 (lower is better)
Translates to: VCFAFRTQPGAAEGQQEHSVSGP*VAPNLS
Trigger: GGACAAGTTTGGGGCCACCCAGGGACCAGAAACAGA...GTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp AGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTTTTCATGTGACAGTATaGACACCACACGGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: SPTGLAAVLVVGGGRFQPFHVTV*TPHGCK
Trigger: CTTGCAGCCGTGTGGTGTCCATACTGTCACATGAAA...AGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGTGCCTTGAAACACTaGTATCCGACCCCACATGCC +
Preference number: 2 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSGALKH*YPTPHA
Trigger: GGCATGTGGGGTCGGATACCAGTGTTTCAAGGCACC...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR GCA 90 bp GGAGTTGTTACTGGACACGCAGCCATAGGGCATGGCCCGTGGGGTCCACTATCGACGATTGGTAGTGTGTaGACTCAAAGCAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: GVVTGHAAIGHGPWGPLSTIGSV*TQSSCS
Trigger: GGAGCAGCTGCTTTGAGTGCACACACTACCAATCGT...CGATAGTGGACCCCACGGGCCATGCCCTATGGCTGCGTGTCCAGTAACAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR GCA 90 bp CCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGACGATTGGTAGTGTGTaGACTCAAAGCAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: PRCALHLGHSPEPQKVSRTIGSV*TQSSCS
Trigger: GGAGCAGCTGCTTTGAGTGCACACACTACCAATCGT...CCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR GCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCAGAACAATCCAGTGTTaGAGTTCAGAGAGGTTAGCA +
Preference number: 2 (lower is better)
Translates to: RAQASAEVCFAFRTQPGARTIQC*SSERLA
Trigger: TGCTAACCTCTCTGAACTGCAACACTGGATTGTTCT...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp GCCCAGCTCCAGAAGACAGGTCTAACCTCATCCTCACCTGCCCAAAGTCCTGTGTGTGCACCCCACTTCTaGCACCCATTTTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: AQLQKTGLTSSSPAQSPVCAPHF*HPFCTC
Trigger: GCAGGTGCAAAATGGGTGGCAGAAGTGGGGTGCACA...CACAGGACTTTGGGCAGGTGAGGATGAGGTTAGACCTGTCTTCTGGAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR CCA 90 bp ATGGGGCAGTGTGTCACTGATGTGAGGCTCCTTAAGCATCAGTCTGTGAAGGGCTTCTGCCCTGGTGTCTaGTCTGGGGTGTGCACCCCA +
Preference number: 2 (lower is better)
Translates to: MGQCVTDVRLLKHQSVKGFCPGV*SGVCTP
Trigger: TGGGGTGCACACCCCAGACCAGACACCAGGGCAGAA...GCCCTTCACAGACTGATGCTTAAGGAGCCTCACATCAGTGACACACTGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR CCA 90 bp GCCCAGCTCCAGAAGACAGGTCTAACCTCATCCTCACCTGCCCAAAGTCCTGTGGGGGAATGCACAAGATaGGGCCTCAGGAGGAAGATC +
Preference number: 2 (lower is better)
Translates to: AQLQKTGLTSSSPAQSPVGECTR*GLRRKI
Trigger: GATCTTCCTCCTGAGGCCCCATCTTGTGCATTCCCC...CACAGGACTTTGGGCAGGTGAGGATGAGGTTAGACCTGTCTTCTGGAGCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR GCA 90 bp CGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGATCAGAAAGGTGTGAATaGTGGCTGACTCCTCTTCGT +
Preference number: 2 (lower is better)
Translates to: RRRSAGARLAPSVPGWVRSERCE*WLTPLR
Trigger: ACGAAGAGGAGTCAGCCAGCATTCACACCTTTCTGA...TCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR GCA 90 bp ATCCATCTCAGGAGTATCCATCCCTTAGAACAGCATGTGGCACACAGTAGGTGCGAGTCCCACAGGGCTTaGAGCTGTCCTGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: IHLRSIHPLEQHVAHSRCESHRA*SCPGGG
Trigger: CCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTC...GCACCTACTGTGTGCCACATGCTGTTCTAAGGGATGGATACTCCTGAGATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR GCA 90 bp GTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACCAATTTGCAGGCAGGTaGCTTGAAACACTGGTATCC +
Preference number: 2 (lower is better)
Translates to: VCFAFRTQPGAAEGQQEHQFAGR*LETLVS
Trigger: GGATACCAGTGTTTCAAGGCACCTGCCTGCAAATTG...GTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR GCA 90 bp AGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCAAGAAACCTCATAGGATaGTTGCCTATCTATGCTATC +
Preference number: 2 (lower is better)
Translates to: SSCSRARVLGSLAHLGRSRNLIG*LPIYAI
Trigger: GATAGCATAGATAGGCAAGCATCCTATGAGGTTTCT...TGATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR GCA 90 bp GCCCAGCTCCAGAAGACAGGTCTAACCTCATCCTCACCTGCCCAAAGTCCTGTGTCTGCAGGAGACACATaGTTTCTTTGCACGAGCAGT +
Preference number: 2 (lower is better)
Translates to: AQLQKTGLTSSSPAQSPVSAGDT*FLCTSS
Trigger: ACTGCTCGTGCAAAGAAAGCATGTGTCTCCTGCAGA...CACAGGACTTTGGGCAGGTGAGGATGAGGTTAGACCTGTCTTCTGGAGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR GCA 90 bp CCACCACCTCCCTGTATTCCAGGAACGATTGGTAGTGTGTGCACTCAAAGCAGCTTCCAGCCTGTATGCTaGAGAGAAAGCAGGGGGCTT +
Preference number: 2 (lower is better)
Translates to: PPPPCIPGTIGSVCTQSSFQPVC*RESRGL
Trigger: AAGCCCCCTGCTTTCTCTGCAGCATACAGGCTGGAA...GCTGCTTTGAGTGCACACACTACCAATCGTTCCTGGAATACAGGGAGGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CCA 90 bp TTTTTGCTTTCTGCCACTCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCCAGGAGTAGAATCTTaGCTAGGGGCTGGTCTCGGT +
Preference number: 2 (lower is better)
Translates to: FLLSATQVWHKWLASPLCPGVES*LGAGLG
Trigger: ACCGAGACCAGCCCCTAGCCAAGATTCTACTCCTGG...ACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp TTTTTGCTTTCTGCCACTCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTGAAAGGTGTGAATGCTaGCTGACTCCTCTTCGTTTC +
Preference number: 2 (lower is better)
Translates to: FLLSATQVWHKWLASPLCERCEC*LTPLRF
Trigger: GAAACGAAGAGGAGTCAGCCAGCATTCACACCTTTC...ACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR-3UTR CCA 90 bp TTTTTGCTTTCTGCCACTCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCCAAACTTGTCCACTTaGGCTCACTGGTCTGTCTAT +
Preference number: 2 (lower is better)
Translates to: FLLSATQVWHKWLASPLCPNLST*AHWSVY
Trigger: ATAGACAGACCAGTGAGCCCAAGTGGACAAGTTTGG...ACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR CAA 90 bp CTCAAACATCTAAAGTATAATAAAATCAATTTGCAGGCAGGTGCCTaGAAACACTGGTATCCGACCCCACATGCCTCTGGGATGGGCCTG +
Preference number: 2 (lower is better)
Translates to: LKHLKYNKINLQAGA*KHWYPTPHASGMGL
Trigger: CAGGCCCATCCCAGAGGCATGTGGGGTCGGATACCAGTGTTTCAAGGCACCTGCCTGCAAATTGATTTTATTATACTTTAGATGTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR TCA 90 bp AAAATTAAAGCAGCAAAGGAACTTTTTGCTTTCTGCCACTCAGGTCTGGCACAAATGCGGGAGCTGGTCTaGGCCATTGCCTCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: KIKAAKELFAFCHSGLAQMRELV*AIASSV
Trigger: TACAGAAGAGGCAATGGCTCAGACCAGCTCCCGCAT...TTGTGCCAGACCTGAGTGGCAGAAAGCAAAAAGTTCCTTTGCTGCTTTAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR CCA 72 bp GGCCTAGCTGCAGGAGGGCTGACCTCTGCACCACTGTaGCTGGGAGGCCAGTGGGCCAGGCGTGCCACCCAG +
Preference number: 3 (lower is better)
Translates to: GLAAGGLTSAPL*LGGQWARRATQ
Trigger: CTGGGTGGCACGCCTGGCCCACTGGCCTCCCAGCCACAGTGGTGCAGAGGTCAGCCCTCCTGCAGCTAGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 72 bp TGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTaGAGGTGGTCCCAGGTGCCCATCTGCTGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: CRASARLGQGPG*RWSQVPICCVL
Trigger: CAGGACACAGCAGATGGGCACCTGGGACCACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CAA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTCGAGCAGTGGCTTGCTaGGGGGAGAGCAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSRAVAC*GESRLG
Trigger: GCCCAGCCTGCTCTCCCCCAAGCAAGCCACTGCTCG...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR CAA 90 bp TTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGGTGGTCCCAGGGGGCTAGCCAGGCCTaGAGCCCAGGAGTAGAATCT +
Preference number: 3 (lower is better)
Translates to: LCRASARLGQGPGWRWSQGASQA*SPGVES
Trigger: AGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCC...CTGGGACCACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CAA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCTGGCTGGCTTCTCCCTaGTGTCGGGCCTCTGCGCGT +
Preference number: 3 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAWLASP*CRASAR
Trigger: ACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR GCA 72 bp GAGGTGCCCAGAGAACCTGCCCCAAACCAGGATGGGTaGTCCTCACTAGGCCACGGCACCACGCCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: EVPREPAPNQDG*SSLGHGTTPVP
Trigger: AGGCACAGGCGTGGTGCCGTGGCCTAGTGAGGAGCACCCATCCTGGTTTGGGGCAGGTTCTCTGGGCACCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 72 bp CCTTCCGCAGCAGGCCACATTCCTCTGGGATGGGCCTaGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: PSAAGHIPLGWA*RVPQGLQLSWW
Trigger: CCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGGCCCATCCCAGAGGAATGTGGCCTGCTGCGGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677397.1
3UTR-3UTR CAA 90 bp TGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGCCGTCAAGGGGAGCTTaGAATGTTTGGTGCCCAAGT +
Preference number: 3 (lower is better)
Translates to: WLASPLCRASARLGQGPGPSRGA*NVWCPS
Trigger: ACTTGGGCACCAAACATTCAAAGCTCCCCTTGACGG...CCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CAA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCTTCTGCCACCCATTTaGCACCTGCACAGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGLLPPI*HLHRQL
Trigger: CAGCTGCCTGTGCAGGTGCAAAATGGGTGGCAGAAG...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR-3UTR CAA 90 bp AGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCAAGAGTCCCACAGGGCTaGCAGCTGTCCTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: SSCSRARVLGSLAHLGRSRVPQG*QLSWWW
Trigger: CCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCT...TGATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CCA 72 bp GCCTGGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTaGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCA +
Preference number: 3 (lower is better)
Translates to: AWRVPQGLQLSW*WVAVVSSLYAA
Trigger: TGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CCA 72 bp TGGGCCTGGAGAGTCCCACAGGGCTTGCAGCTGTCCTaGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCT +
Preference number: 3 (lower is better)
Translates to: WAWRVPQGLQLS*WWVAVVSSLYA
Trigger: AGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CCA 72 bp ACTGGTATCCGACCCCACATGCCTCTGGGATGGGCCTaGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: TGIRPHMPLGWA*RVPQGLQLSWW
Trigger: CCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGGCCCATCCCAGAGGCATGTGGGGTCGGATACCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 72 bp GTCAGAGGTGCCCAGAGAACCTGCCCCAAACCAGGATaGGTGCTCCTCACTAGGCCACGGCACCACGCCTGT +
Preference number: 3 (lower is better)
Translates to: VRGAQRTCPKPG*VLLTRPRHHAC
Trigger: ACAGGCGTGGTGCCGTGGCCTAGTGAGGAGCACCCATCCTGGTTTGGGGCAGGTTCTCTGGGCACCTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR CAA 90 bp CAAAGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGACCTGGGCAGATCACGTaGTCAGCCAGTAGCACTGTC +
Preference number: 3 (lower is better)
Translates to: QSSCSRARVLGSLAHLGRPGQIT*SASSTV
Trigger: GACAGTGCTACTGGCTGACAACGTGATCTGCCCAGG...TCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CAA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCAGAGTCCCACAGGGCTaGCAGCTGTCCTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: KVSRSTSGTFSTRLGERARVPQG*QLSWWW
Trigger: CCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCT...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR TCA 72 bp GGGCCCTCAACACCCAGTGCCAGGAACTCAGGCCTATaGGGGAGAGGCACCCAAGGAGAGGGGTTGCTGGTA +
Preference number: 3 (lower is better)
Translates to: GPSTPSARNSGL*GRGTQGEGLLV
Trigger: TACCAGCAACCCCTCTCCTTGGGTGCCTCTCCCTCATAGGCCTGAGTTCCTGGCACTGGGTGTTGAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR GCA 72 bp GGCAGGTGCCTTGAAACACTGGTATCCGACCCCACATaGCTCTGGGATGGGCCTGGAGAGTCCCACAGGGCT +
Preference number: 3 (lower is better)
Translates to: GRCLETLVSDPT*LWDGPGESHRA
Trigger: AGCCCTGTGGGACTCTCCAGGCCCATCCCAGAGGCATGTGGGGTCGGATACCAGTGTTTCAAGGCACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 72 bp GGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTaGCTAGGGGCTGGTCTCGGTGCAGGTGAACTCAGC +
Preference number: 3 (lower is better)
Translates to: GASQALSPGVES*LGAGLGAGELS
Trigger: GCTGAGTTCACCTGCACCGAGACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 72 bp TGGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTaGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: WRVPQGLQLSWW*VAVVSSLYAAE
Trigger: CTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CAA 90 bp CAGGCCTATGAGGGAGAGGCACCCAAGGAGAGGGGTTGCTGGTATGGTCCCTGGCCTGGGCAGATCACGTaGTCAGCCAGTAGCACTGTC +
Preference number: 3 (lower is better)
Translates to: QAYEGEAPKERGCWYGPWPGQIT*SASSTV
Trigger: GACAGTGCTACTGGCTGACAACGTGATCTGCCCAGG...CCAGGGACCATACCAGCAACCCCTCTCCTTGGGTGCCTCTCCCTCATAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR CAA 90 bp TCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCCCGTCAAGGGGAGCTTaGAATGTTTGGTGCCCAAGT +
Preference number: 3 (lower is better)
Translates to: SGTSGWLLPCVGPLRVWGPSRGA*NVWCPS
Trigger: ACTTGGGCACCAAACATTCAAAGCTCCCCTTGACGG...GCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CAA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCCCAGGAGTAGAATCTaGGCTAGGGGCTGGTCTCGG +
Preference number: 3 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAPRSRI*ARGWSR
Trigger: CCGAGACCAGCCCCTAGCCAAGATTCTACTCCTGGG...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR TCA 72 bp CAGCGCCTGCTTGGTCAGAAAGGTGTGAATGCTGGCTaGCTCCTCTTCGTTTCCCAGGCCGGCAGTCGTCCC +
Preference number: 3 (lower is better)
Translates to: QRLLGQKGVNAG*LLFVSQAGSRP
Trigger: GGGACGACTGCCGGCCTGGGAAACGAAGAGGAGTCAGCCAGCATTCACACCTTTCTGACCAAGCAGGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR TCA 72 bp CCACCTGTCCCCAGCGCCTGCTTGGTCAGAAAGGTGTaGATGCTGGCTGACTCCTCTTCGTTTCCCAGGCCG +
Preference number: 3 (lower is better)
Translates to: PPVPSACLVRKV*MLADSSSFPRP
Trigger: CGGCCTGGGAAACGAAGAGGAGTCAGCCAGCATTCACACCTTTCTGACCAAGCAGGCGCTGGGGACAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR TCA 72 bp GCCAGGGAGGCAACTACAGGGATGCGGGAGCTGGTCTaGGCCATTGCCTCTTCTGTAAGCAAGGCCCAGTGG +
Preference number: 3 (lower is better)
Translates to: AREATTGMRELV*AIASSVSKAQW
Trigger: CCACTGGGCCTTGCTTACAGAAGAGGCAATGGCTCAGACCAGCTCCCGCATCCCTGTAGTTGCCTCCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 72 bp TCCCCAGCGCCTGCTTGGTCAGAAAGGTGTGAATGCTaGCTGACTCCTCTTCGTTTCCCAGGCCGGCAGTCG +
Preference number: 3 (lower is better)
Translates to: SPAPAWSERCEC*LTPLRFPGRQS
Trigger: CGACTGCCGGCCTGGGAAACGAAGAGGAGTCAGCCAGCATTCACACCTTTCTGACCAAGCAGGCGCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 72 bp TGCTGCTGCGGGGTCCACCTGTCCCCAGCGCCTGCTTaGTCAGAAAGGTGTGAATGCTGGCTGACTCCTCTT +
Preference number: 3 (lower is better)
Translates to: CCCGVHLSPAPA*SERCECWLTPL
Trigger: AAGAGGAGTCAGCCAGCATTCACACCTTTCTGACCAAGCAGGCGCTGGGGACAGGTGGACCCCGCAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 72 bp TTGGGCTCACTGGTCTGTCTATCCATAGGAGTGGGCTaGCTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTA +
Preference number: 3 (lower is better)
Translates to: LGSLVCLSIGVG*LGASQALSPGV
Trigger: TACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAGCCAGCCCACTCCTATGGATAGACAGACCAGTGAGCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 72 bp CTCGCCAGTGGGGCTGGGTTGGGGGAATGCACAAGATaGGGCCTCAGGAGGAAGATCTGCAGGAGACACATG +
Preference number: 3 (lower is better)
Translates to: LASGAGLGECTR*GLRRKICRRHM
Trigger: CATGTGTCTCCTGCAGATCTTCCTCCTGAGGCCCCATCTTGTGCATTCCCCCAACCCAGCCCCACTGGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CCA 72 bp GAGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTGGGTaGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAAG +
Preference number: 3 (lower is better)
Translates to: ESHRACSCPGGG*RSFPACMLQRK
Trigger: CTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CCA 72 bp CTGCCTGGGTTCTGTGCAGAAGGAAGGAGTTGTTACTaGACACGCAGCCATAGGGCATGGCCCGTGGGGTCC +
Preference number: 3 (lower is better)
Translates to: LPGFCAEGRSCY*TRSHRAWPVGS
Trigger: GGACCCCACGGGCCATGCCCTATGGCTGCGTGTCCAGTAACAACTCCTTCCTTCTGCACAGAACCCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR GCA 72 bp CCAGGAACGATTGGTAGTGTGTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCAC +
Preference number: 3 (lower is better)
Translates to: PGTIGSVCTQSS*SRARVLGSLAH
Trigger: GTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACACACTACCAATCGTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR GCA 72 bp TGGGTGAGTGGAAACAATGGGGCCCTCAACACCCAGTaGCAGGAACTCAGGCCTATGAGGGAGAGGCACCCA +
Preference number: 3 (lower is better)
Translates to: WVSGNNGALNTQ*QELRPMRERHP
Trigger: TGGGTGCCTCTCCCTCATAGGCCTGAGTTCCTGGCACTGGGTGTTGAGGGCCCCATTGTTTCCACTCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 72 bp CTGTGTCCTGCAGAGGCTCTGTTTCTGGTCCCTGGGTaGCCCCAAACTTGTCCACTTGGGCTCACTGGTCTG +
Preference number: 3 (lower is better)
Translates to: LCPAEALFLVPG*PQTCPLGLTGL
Trigger: CAGACCAGTGAGCCCAAGTGGACAAGTTTGGGGCCACCCAGGGACCAGAAACAGAGCCTCTGCAGGACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 72 bp TCTGCTGTGTCCTGCAGAGGCTCTGTTTCTGGTCCCTaGGTGGCCCCAAACTTGTCCACTTGGGCTCACTGG +
Preference number: 3 (lower is better)
Translates to: SAVSCRGSVSGP*VAPNLSTWAHW
Trigger: CCAGTGAGCCCAAGTGGACAAGTTTGGGGCCACCCAGGGACCAGAAACAGAGCCTCTGCAGGACACAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR CCA 72 bp TTTTGCTTTCTGCCACTCAGGTCTGGCACAAGTGGCTaGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGG +
Preference number: 3 (lower is better)
Translates to: FCFLPLRSGTSG*LLPCVGPLRVW
Trigger: CCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR CCA 72 bp CTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTaGGGTGTGCACCCCACTTCTGCCACCCATTTTGCA +
Preference number: 3 (lower is better)
Translates to: LGPVPFLPWCLV*GVHPTSATHFA
Trigger: TGCAAAATGGGTGGCAGAAGTGGGGTGCACACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CCA 72 bp ATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTaGTCTGGGGTGTGCACCCCACTTCTGCCACCCATT +
Preference number: 3 (lower is better)
Translates to: ISLVLCRFCPGV*SGVCTPLLPPI
Trigger: AATGGGTGGCAGAAGTGGGGTGCACACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CCA 72 bp GAGGCACCCAAGGAGAGGGGTTGCTGGTATGGTCCCTaGAGACAATATTGGCCTGACCAGGGTGACCCTGCA +
Preference number: 3 (lower is better)
Translates to: EAPKERGCWYGP*RQYWPDQGDPA
Trigger: TGCAGGGTCACCCTGGTCAGGCCAATATTGTCTCCAGGGACCATACCAGCAACCCCTCTCCTTGGGTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR CAA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGGGGAGCTTTGAATGTTaGGTGCCCAAGTCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: CCSSERLACQGAGLGRGVGSFEC*VPKSRA
Trigger: TGCCCTTGACTTGGGCACCAAACATTCAAAGCTCCC...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR-3UTR CAA 90 bp TGCCTGGGCCCTTGTAGATGGCCTTCTCCAGGCCGTCCACCACCTCCCTGTATTTGCAGAAGGAAGGAGTaGTTACTGGACACGCAGCCA +
Preference number: 3 (lower is better)
Translates to: CLGPCRWPSPGRPPPPCICRRKE*LLDTQP
Trigger: TGGCTGCGTGTCCAGTAACAACTCCTTCCTTCTGCA...AATACAGGGAGGTGGTGGACGGCCTGGAGAAGGCCATCTACAAGGGCCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR GCA 72 bp GTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATaGTGCAGAGAAAGCAGGGGGCTTTCATGTGACAGT +
Preference number: 3 (lower is better)
Translates to: VLVVGGGRFQPV*CRESRGLSCDS
Trigger: ACTGTCACATGAAAGCCCCCTGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR GCA 72 bp GTGACTCCTGCAGGAAAGGACTGTACAAGACTTGGGTaGCACCTTCAGAACATGGGCCCCGTGAGGACAGGG +
Preference number: 3 (lower is better)
Translates to: VTPAGKDCTRLG*HLQNMGPVRTG
Trigger: CCCTGTCCTCACGGGGCCCATGTTCTGAAGGTGGCACCCAAGTCTTGTACAGTCCTTTCCTGCAGGAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 72 bp GCCTATGAGGGAGAGGCACCCAAGGAGAGGGGTTGCTaGTATGGTCCCTGGAGACAATATTGGCCTGACCAG +
Preference number: 3 (lower is better)
Translates to: AYEGEAPKERGC*YGPWRQYWPDQ
Trigger: CTGGTCAGGCCAATATTGTCTCCAGGGACCATACCAGCAACCCCTCTCCTTGGGTGCCTCTCCCTCATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR CCA 72 bp CAGCGTGACTCCTGCAGGAAAGGACTGTACAAGACTTaGGTGCCACCTTCAGAACATGGGCCCCGTGAGGAC +
Preference number: 3 (lower is better)
Translates to: QRDSCRKGLYKT*VPPSEHGPRED
Trigger: GTCCTCACGGGGCCCATGTTCTGAAGGTGGCACCCAAGTCTTGTACAGTCCTTTCCTGCAGGAGTCACGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR CAA 90 bp GTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGGGAGCTTTGAATGTTaGGTGCCCAAGTCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: VCFAFRTQPGAAEGQQEHGSFEC*VPKSRA
Trigger: TGCCCTTGACTTGGGCACCAAACATTCAAAGCTCCC...GTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR GCA 72 bp CCACCTCCCTGTATTCCAGGAACGATTGGTAGTGTGTaGACTCAAAGCAGCTGCTCCCGCGCACGTGTGCTA +
Preference number: 3 (lower is better)
Translates to: PPPCIPGTIGSV*TQSSCSRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACACACTACCAATCGTTCCTGGAATACAGGGAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR GCA 72 bp GATGGGGCCTCAGGAGGAAGATCTGCAGGAGACACATaGTTTCTTTGCACGAGCAGTGGCTTGCTTGGGGGA +
Preference number: 3 (lower is better)
Translates to: DGASGGRSAGDT*FLCTSSGLLGG
Trigger: TCCCCCAAGCAAGCCACTGCTCGTGCAAAGAAAGCATGTGTCTCCTGCAGATCTTCCTCCTGAGGCCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CCA 72 bp AACTTTTTGCTTTCTGCCACTCAGGTCTGGCACAAGTaGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGT +
Preference number: 3 (lower is better)
Translates to: NFLLSATQVWHK*LASPLCRASAR
Trigger: ACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR CCA 72 bp GCTGCAGAGAAAGCAGGGGGCTTTCATGTGACAGTATaGACACCACACGGCTGCAAGGTCAGTGAGGTCAGG +
Preference number: 3 (lower is better)
Translates to: AAEKAGGFHVTV*TPHGCKVSEVR
Trigger: CCTGACCTCACTGACCTTGCAGCCGTGTGGTGTCCATACTGTCACATGAAAGCCCCCTGCTTTCTCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CCA 72 bp GGAAGGAGTTGTTACTGGACACGCAGCCATAGGGCATaGCCCGTGGGGTCCACTATCGGGAGAAACCTCATA +
Preference number: 3 (lower is better)
Translates to: GRSCYWTRSHRA*PVGSTIGRNLI
Trigger: TATGAGGTTTCTCCCGATAGTGGACCCCACGGGCCATGCCCTATGGCTGCGTGTCCAGTAACAACTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR CAA 90 bp CAGGCCTATGAGGGAGAGGCACCCAAGGAGAGGGGTTGCTGGTATGGTCCCTGGGACACCCCAGTCACCTaGTCTTGGAAATTTGACTTA +
Preference number: 3 (lower is better)
Translates to: QAYEGEAPKERGCWYGPWDTPVT*SWKFDL
Trigger: TAAGTCAAATTTCCAAGACAAGGTGACTGGGGTGTC...CCAGGGACCATACCAGCAACCCCTCTCCTTGGGTGCCTCTCCCTCATAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR TCA 72 bp GCCTGTATGCTGCAGAGAAAGCAGGGGGCTTTCATGTaGCAGTATGGACACCACACGGCTGCAAGGTCAGTG +
Preference number: 3 (lower is better)
Translates to: ACMLQRKQGAFM*QYGHHTAARSV
Trigger: CACTGACCTTGCAGCCGTGTGGTGTCCATACTGTCACATGAAAGCCCCCTGCTTTCTCTGCAGCATACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR GCA 72 bp TCAGGAGGAAGATCTGCAGGAGACACATGCTTTCTTTaGACGAGCAGTGGCTTGCTTGGGGGAGAGCAGGCT +
Preference number: 3 (lower is better)
Translates to: SGGRSAGDTCFL*TSSGLLGGEQA
Trigger: AGCCTGCTCTCCCCCAAGCAAGCCACTGCTCGTGCAAAGAAAGCATGTGTCTCCTGCAGATCTTCCTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CCA 72 bp CAGCAAAGGAACTTTTTGCTTTCTGCCACTCAGGTCTaGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCC +
Preference number: 3 (lower is better)
Translates to: QQRNFLLSATQV*HKWLASPLCRA
Trigger: GGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGAAAGCAAAAAGTTCCTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
3UTR-3UTR CAA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCGTATTCCAGGAACGATaGGTAGTGTGTGCACTCAAA +
Preference number: 3 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAVFQER*VVCALK
Trigger: TTTGAGTGCACACACTACCAATCGTTCCTGGAATAC...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR-3UTR CAA 90 bp GCCCAGCTCCAGAAGACAGGTCTAACCTCATCCTCACCTGCCCAAAGTCCTGTGAGACACATGCTTTCTTaGCACGAGCAGTGGCTTGCT +
Preference number: 3 (lower is better)
Translates to: AQLQKTGLTSSSPAQSPVRHMLS*HEQWLA
Trigger: AGCAAGCCACTGCTCGTGCAAAGAAAGCATGTGTCT...CACAGGACTTTGGGCAGGTGAGGATGAGGTTAGACCTGTCTTCTGGAGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR TCA 72 bp CAAGACTTGGGTGCCACCTTCAGAACATGGGCCCCGTaGGGACAGGGACCTTTCTCTCATCAACTCCTGTAT +
Preference number: 3 (lower is better)
Translates to: QDLGATFRTWAP*GQGPFSHQLLY
Trigger: ATACAGGAGTTGATGAGAGAAAGGTCCCTGTCCTCACGGGGCCCATGTTCTGAAGGTGGCACCCAAGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR CAA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGTATTCCAGGAACGATaGGTAGTGTGTGCACTCAAA +
Preference number: 3 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSVFQER*VVCALK
Trigger: TTTGAGTGCACACACTACCAATCGTTCCTGGAATAC...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR CCA 72 bp AATAAAATCAATTTGCAGGCAGGTGCCTTGAAACACTaGTATCCGACCCCACATGCCTCTGGGATGGGCCTG +
Preference number: 3 (lower is better)
Translates to: NKINLQAGALKH*YPTPHASGMGL
Trigger: CAGGCCCATCCCAGAGGCATGTGGGGTCGGATACCAGTGTTTCAAGGCACCTGCCTGCAAATTGATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR GCA 72 bp CCCGTGGGGTCCACTATCGGGAGAAACCTCATAGGATaGTTGCCTATCTATGCTATCAGAAAAGGGTTTGCT +
Preference number: 3 (lower is better)
Translates to: PVGSTIGRNLIG*LPIYAIRKGFA
Trigger: AGCAAACCCTTTTCTGATAGCATAGATAGGCAAGCATCCTATGAGGTTTCTCCCGATAGTGGACCCCACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
3UTR-3UTR CAA 90 bp AAAAAGAACAATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGAAGAACAATCCAGTGTaGCAGTTCAGAGAGGTTAGC +
Preference number: 3 (lower is better)
Translates to: KKNNPVLQFREVSMSGRRKNNPV*QFREVS
Trigger: GCTAACCTCTCTGAACTGCAACACTGGATTGTTCTT...CCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGATTGTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
3UTR GCA 72 bp TATCGGGAGAAACCTCATAGGATGCTTGCCTATCTATaGTATCAGAAAAGGGTTTGCTTACATCACATAAAC +
Preference number: 3 (lower is better)
Translates to: YREKPHRMLAYL*YQKRVCLHHIN
Trigger: GTTTATGTGATGTAAGCAAACCCTTTTCTGATAGCATAGATAGGCAAGCATCCTATGAGGTTTCTCCCGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR TCA 90 bp GCCAGTGGGCCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: ASGPGVPPRTQPARGPALEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...AAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: GSEDSPTRCLASLGALRVEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...GACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GGGCTGACCTCTGCACCACTGTGGCTGGGAGGCCAGTGGGCCAGGCGTGCCACCCCAGTGGGCCAGGCGTaGCACCCAGAACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLTSAPLWLGGQWARRATPVGQA*HPEPSQ
Trigger: CTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGG...GGTGGCACGCCTGGCCCACTGGCCTCCCAGCCACAGTGGTGCAGAGGTCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTAGCGTTAGCTGGCTGGGAGGCCAGTaGGCCAGGCGTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: PGVPPRTQPARGPALSVSWLGGQ*ARRATQ
Trigger: CTGGGTGGCACGCCTGGCCCACTGGCCTCCCAGCCA...GCTAACGCTAAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGGGCCCTGGGTGGAGGTaGTCCCAGGTGCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: WLASPLCRASARLGQGPGGPGWR*SQVPIC
Trigger: GCAGATGGGCACCTGGGACCACCTCCACCCAGGGCC...CCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCAGTGGGCCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTCAGGGTCACACTCCCTaGCCCTGGGTGCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ASGPGVPPRTQPARGPALQGHTP*PWVLPQ
Trigger: CTGGGGAAGCACCCAGGGCCAGGGAGTGTGACCCTG...AAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR TCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTGCGGGCAGCCCTAGCTaGCCCAGAAGCCCCACGACG +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGAGSPS*PRSPTT
Trigger: CGTCGTGGGGCTTCTGGGGCAGCTAGGGCTGCCCGC...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGGCCCAGAGGGGCTGGTaGTGCTGCGGGGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GRRPRPRCALHLGHSPEPAQRGW*CCGVHL
Trigger: CAGGTGGACCCCGCAGCAGCACCAGCCCCTCTGGGC...CGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCAGGCTCCAGCCCTCTaGCTGCGGGAGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGQAPAL*LREGSG
Trigger: CCCAGACCCCTCCCGCAGCCAGAGGGCTGGAGCCTG...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp TTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGGTGGTCCCAGTCCATAGGAGTGGGCTaGCTGGGGGCTAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LCRASARLGQGPGWRWSQSIGVG*LGASQA
Trigger: GGCCTGGCTAGCCCCCAGCCAGCCCACTCCTATGGA...CTGGGACCACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGGCCCAGAGGGGCTGGTaGTGCTGCGGGGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGAQRGW*CCGVHL
Trigger: CAGGTGGACCCCGCAGCAGCACCAGCCCCTCTGGGC...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGGGAGGTGGTCCCAGGTaGCCATCTGCTGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: WLASPLCRASARLGQGPGGGGPR*PSAVSC
Trigger: GCAGGACACAGCAGATGGGCACCTGGGACCACCTCC...CCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: PVLQFREVSMSGRRPRPREPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...CCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp ACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: TARSRRRSAGARLAPSVPEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...TGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERAREPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTAGCGTTAGCCTTGGCCTCATGTGGTaGGCCCGTGCTGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: PGVPPRTQPARGPALSVSLGLMW*ARAGHP
Trigger: TGGGTGACCAGCACGGGCTCACCACATGAGGCCAAG...GCTAACGCTAAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR GCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTGCCCAGCAACACAGCTaGCAACAGCAGAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSAQQHS*QQQRRG
Trigger: GCCCCGCCTCTGCTGTTGGCAGCTGTGTTGCTGGGC...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: GRRPRPRCALHLGHSPEPLQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...CGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCGGGCAGCCCTAGCTaGCCCAGAAGCCCCACGACG +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQAGSPS*PRSPTT
Trigger: CGTCGTGGGGCTTCTGGGGCAGCTAGGGCTGCCCGC...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000403710.5
ENST00000407537.5
ENST00000678868.1
CDS-3UTR GCA 90 bp TGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTCCCAGGTGCCCATCTaGTGTGTCCTGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WLASPLCRASARLGQGPGSQVPI*CVLQRL
Trigger: GAGCCTCTGCAGGACACAGCAGATGGGCACCTGGGA...CCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGGTGGAGGTGGTCCCAGGTaGCCATCTGCTGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLPCVGPLRVWGRALGGGGGGPR*PSAVSC
Trigger: GCAGGACACAGCAGATGGGCACCTGGGACCACCTCC...ACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGCAGGCTCCAGCCCTCTaGCTGCGGGAGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWQAPAL*LREGSG
Trigger: CCCAGACCCCTCCCGCAGCCAGAGGGCTGGAGCCTG...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: WLASPLCRASARLGQGPGCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...CCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCAGTGGGCCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTGAAGTCTGGCGCACCTaGGCAGATCACGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: ASGPGVPPRTQPARGPALEVWRT*ADHVVS
Trigger: GCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTC...AAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTCTGGGGCAGGGCCCTaGGTGGAGGTGGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ARSRRRSAGARLAPSVPGSGAGP*VEVVPG
Trigger: ACCTGGGACCACCTCCACCCAGGGCCCTGCCCCAGA...GCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCTACCTAGCCAGGCATaGGGGCTGTGCCCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGLPSQA*GLCPSC
Trigger: GCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAG...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000403184.5
3UTR CAA 72 bp GCCACTCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTaGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ATQVWHKWLASP*CRASARLGQGP
Trigger: AGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR TCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARSRRRSAGARLAPSVPGGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...GCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CGGCAGGTACCGGTCCTTCCAGTGGTCGAGGAAGACCATGTCCAGTGTGTCCACGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: RQVPVLPVVEEDHVQCVHEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...GTGGACACACTGGACATGGTCTTCCTCGACCACTGGAAGGACCGGTACCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000207636.9
CDS-3UTR TCA 90 bp TGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: CSSERLACQGAGLGRGVLEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...AAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: WLASPLCRASARLGQGPGSSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...CCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTGAGGCTGAGGCTGACTaGATGGGCTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSEAEAD*MGSGQQ
Trigger: CTGCTGCCCAGAGCCCATTCAGTCAGCCTCAGCCTC...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: RAQASAEVCFAFRTQPGALQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: ARSRRRSAGARLAPSVPGLQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...GCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGTGCGGGCAGCCCTAGCTaGCCCAGAAGCCCCACGACG +
Preference number: 4 (lower is better)
Translates to: LGASQALSPGVESWLGAGAGSPS*PRSPTT
Trigger: CGTCGTGGGGCTTCTGGGGCAGCTAGGGCTGCCCGC...ACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361682.11
ENST00000678868.1
CDS-3UTR GCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCCTTGTGTCGGGCCTCTaGGCGTCTGGGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVLVSGL*ASGAGP
Trigger: GGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAG...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCAGTGGGCCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTCCCATGAGCAGGTTGTaGATGGGCTGCAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: ASGPGVPPRTQPARGPALPMSRL*MGCRMN
Trigger: GTTCATCCTGCAGCCCATCCACAACCTGCTCATGGG...AAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGGTGGTCCCAGAAATCCACCATCCGCTaGGTGATGGCGGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: LCRASARLGQGPGWRWSQKSTIR*VMAAQS
Trigger: CGACTGTGCCGCCATCACCCAGCGGATGGTGGATTT...CTGGGACCACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGCCTGGGCCTGGGAACTaGGCCCTTGGAGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGPGPGN*ALGASE
Trigger: CTCAGAGGCTCCAAGGGCCCAGTTCCCAGGCCCAGG...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTCTCCCAGACCTCAGGTaGTGCCTCCAGAGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSLPDLR*CLQSEL
Trigger: CAGCTCGCTCTGGAGGCACCACCTGAGGTCTGGGAG...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp GGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCCCTCGCCAGTGGGGCTaGGTTGGGGGAATGCACAAG +
Preference number: 4 (lower is better)
Translates to: GSEDSPTRCLASLGALRVPRQWG*VGGMHK
Trigger: CTTGTGCATTCCCCCAACCCAGCCCCACTGGCGAGG...GACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp ACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCGCCTTGGCACCTGCTTaGAGGCCCCCTGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TSGWLLPCVGPLRVWGRAALAPA*RPPAGQ
Trigger: TTGACCTGCAGGGGGCCTCCAAGCAGGTGCCAAGGC...GGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR TCA 90 bp GGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGGTCTGGGGTCTCCTCTaGGCTCGGCAGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRRPRPRCALHLGHSPEPVWGLL*ARQQSR
Trigger: TCTGCTTTGCTGCCGAGCTCAGAGGAGACCCCAGAC...CGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: SGTSGWLLPCVGPLRVWGEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...GCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SGRRPRPRCALHLGHSPEGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...CTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSEPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp ACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCAGCTAGCACAGGGTTaGTTCCTGTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSGWLLPCVGPLRVWGRAQLAQG*FLSWAW
Trigger: CCAGGCCCAGGACAGGAATCAACCCTGTGCTAGCTG...GGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGAGAGCACAGGAGGCCTaGGGCAGAAGCCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGRAQEA*GRSPGV
Trigger: AACCCCTGGGCTTCTGCCTCAGGCCTCCTGTGCTCT...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407537.5
ENST00000678255.1
CDS-3UTR GCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWLQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQLQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: SGRRPRPRCALHLGHSPELQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...CTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGGGGCAGTCAGGGCCCTaGTTCGCTGCCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PVLQFREVSMSGRRPRPRGQSGP*FAAWAL
Trigger: AAGGGCCCAGGCAGCGAAGCAGGGCCCTGACTGCCC...CCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGGCAGTCAGGGCCCTaGTTCGCTGCCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: TARSRRRSAGARLAPSVPGQSGP*FAAWAL
Trigger: AAGGGCCCAGGCAGCGAAGCAGGGCCCTGACTGCCC...TGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GGGCTGACCTCTGCACCACTGTGGCTGGGAGGCCAGTGGGCCAGGCGTGCCACCGCCTCGGCCGAGGTGTaGTTTGCATTTAGGACACAG +
Preference number: 4 (lower is better)
Translates to: GLTSAPLWLGGQWARRATASAEV*FAFRTQ
Trigger: CTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC...GGTGGCACGCCTGGCCCACTGGCCTCCCAGCCACAGTGGTGCAGAGGTCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCGCGGGCAGCCCTAGCTaGCCCAGAAGCCCCACGACG +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCALHLGHSAGSPS*PRSPTT
Trigger: CGTCGTGGGGCTTCTGGGGCAGCTAGGGCTGCCCGC...GCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000403710.5
ENST00000407537.5
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTCTTGTGTCGGGCCTCTaGGCGTCTGGGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCLVSGL*ASGAGP
Trigger: GGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAG...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGTCCTGTGTGGAGCCTaGAGGGTCACACTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAVLCGA*RVTLPG
Trigger: GCCAGGGAGTGTGACCCTGCAGGCTCCACACAGGAC...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp GGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCCACCCATTTTGCACCTaGACAGGCAGCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSEDSPTRCLASLGALRVHPFCT*TGSWLP
Trigger: GGGGAGCCAGCTGCCTGTGCAGGTGCAAAATGGGTG...GACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTGTCCTGTGCCGTTTCTaGCCTGGTGTCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGVLCRF*PGVWSG
Trigger: CCCAGACCAGACACCAGGGCAGAAACGGCACAGGAC...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCCTCAAGCGCTCCTCCTaGCGTAGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GSEDSPTRCLASLGALRVLKRSS*RSLPKC
Trigger: GCACTTTGGGAGGCTACGGCAGGAGGAGCGCTTGAG...GACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp CGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTCAGGCTCCAGCCCTCTaGCTGCGGGAGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RTCARKSGAPGQITLSASQAPAL*LREGSG
Trigger: CCCAGACCCCTCCCGCAGCCAGAGGGCTGGAGCCTG...ACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000207636.9
ENST00000428707.2
CDS-3UTR CCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTCAGGCTCCAGCCCTCTaGCTGCGGGAGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCQAPAL*LREGSG
Trigger: CCCAGACCCCTCCCGCAGCCAGAGGGCTGGAGCCTG...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp CTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGGTTGGGGGATGATGTCCTaGGACGCTCCAACCACAAGG +
Preference number: 4 (lower is better)
Translates to: LLPCVGPLRVWGRALGGGWGMMS*DAPTTR
Trigger: CCTTGTGGTTGGAGCGTCCCAGGACATCATCCCCCA...ACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp ACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: TSGWLLPCVGPLRVWGRAPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...GGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGCGACGATGGCGGCAATaGCGGTGGCGCTGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKRRWRQ*RWRCGD
Trigger: ATCCCCGCAGCGCCACCGCCATTGCCGCCATCGTCG...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361682.11
ENST00000403710.5
CDS-3UTR CCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCGAAGCCCCACGACGATaGCGGCAATGGCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTEAPRR*RQWRWR
Trigger: GCGCCACCGCCATTGCCGCCATCGTCGTGGGGCTTC...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361682.11
ENST00000403710.5
CDS-3UTR CCA 90 bp CCACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTGAAGCCCCACGACGATaGCGGCAATGGCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PPHLLGPVPFLPWCLVWGEAPRR*RQWRWR
Trigger: GCGCCACCGCCATTGCCGCCATCGTCGTGGGGCTTC...ACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp TTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTTGGCTGGGAGGCCAGTaGGCCAGGCGTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: FRTQPGAAEGQQEHVWHLWLGGQ*ARRATQ
Trigger: CTGGGTGGCACGCCTGGCCCACTGGCCTCCCAGCCA...AAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTCCCCAGCGCCTGCTTaGTCAGAAAGGTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: WLASPLCRASARLGQGPGSPAPA*SERCEC
Trigger: GCATTCACACCTTTCTGACCAAGCAGGCGCTGGGGA...CCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGCCACTCTGTGCCACATaGGGCCCAGAGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGPLCAT*GPEGLV
Trigger: CACCAGCCCCTCTGGGCCCCATGTGGCACAGAGTGG...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGGCTGACCTCTGCACCACTGTGGCTGGGAGGCCAGTGGGCCAGGCGTGCCACCCTGCATCCTCACTCATaGGCCAGGGAGGCAACTACA +
Preference number: 4 (lower is better)
Translates to: GLTSAPLWLGGQWARRATLHPHS*AREATT
Trigger: TGTAGTTGCCTCCCTGGCCCATGAGTGAGGATGCAG...GGTGGCACGCCTGGCCCACTGGCCTCCCAGCCACAGTGGTGCAGAGGTCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGCCAGGAGTAGAATCTTaGCTAGGGGCTGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: WLASPLCRASARLGQGPGPGVES*LGAGLG
Trigger: ACCGAGACCAGCCCCTAGCCAAGATTCTACTCCTGG...CCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGGTGGTCCCAGCCAGGAGTAGAATCTTaGCTAGGGGCTGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: LCRASARLGQGPGWRWSQPGVES*LGAGLG
Trigger: ACCGAGACCAGCCCCTAGCCAAGATTCTACTCCTGG...CTGGGACCACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCCAGGGTCACACTCCCTaGCCCTGGGTGCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HSPEPQKVSRSTSGTFSTQGHTP*PWVLPQ
Trigger: CTGGGGAAGCACCCAGGGCCAGGGAGTGTGACCCTG...GGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR CCA 90 bp GGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCGCACGGATGCCATCCTaGTTGGGGCTCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GSEDSPTRCLASLGALRVARMPS*LGLTSK
Trigger: CTTGGAGGTGAGCCCCAACCAGGATGGCATCCGTGC...GACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTCCCTGGTGTCTGGTCTaGGGTGTGCACCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSPWCLV*GVHPTS
Trigger: AGAAGTGGGGTGCACACCCCAGACCAGACACCAGGG...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTGTGCCGTTTCTGCCCTaGTGTCTGGTCTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGVPFLP*CLVWGV
Trigger: CACACCCCAGACCAGACACCAGGGCAGAAACGGCAC...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTGGTCTCGAACTCTCCTaGCCTCAAGCGCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGGLELS*PQALLL
Trigger: CAGGAGGAGCGCTTGAGGCCAGGAGAGTTCGAGACC...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGAGCCCCCTTCCCAGGTaGGGAAACTGGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWSPLPR*GNWGWV
Trigger: CACCCAGCCCCAGTTTCCCCACCTGGGAAGGGGGCT...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676678.1
CDS-3UTR CCA 90 bp CTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGGTGGGGGTAGTCACGGGTaGCCAAAGGAGAGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LLPCVGPLRVWGRALGGGGGSHG*PKERLY
Trigger: ATACAGCCTCTCCTTTGGCCACCCGTGACTACCCCC...ACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR TCA 90 bp TCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGTGTGCCTCAGTTGCCTaGCGTGTCAGCGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SGRRPRPRCALHLGHSPECASVA*RVSARE
Trigger: CTCCCTGGCGCTGACACGTCAGGCAACTGAGGCACA...CTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR TCA 90 bp GGTGGGTGTCCCAAGCCCAGTGGAGGATCACAGAGCCACTCAGTGTCGCTGACCGCCACTCAGTGTCGCTaGCCACCAGGGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GGCPKPSGGSQSHSVSLTATQCR*PPGRDG
Trigger: CCCATCCCTCCCTGGTGGTCAGCGACACTGAGTGGC...GGTCAGCGACACTGAGTGGCTCTGTGATCCTCCACTGGGCTTGGGACACCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR TCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCCCTTCAAAGCACCTCTaGGCAGGCTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAPSKHL*AGSSPL
Trigger: CAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGG...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407537.5
ENST00000678255.1
CDS-3UTR TCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGCAGACAGAAGCCTGGTaGGGGGACCCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWQTEAW*GDPAGR
Trigger: TCTGCCTGCTGGGTCCCCTCACCAGGCTTCTGTCTG...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407537.5
ENST00000678255.1
CDS-3UTR TCA 90 bp GCTGCCTGGGCCCTTGTAGATGGCCTTCTCCAGGCCGTCCACCACCTCCCTGTACAGGGAATGCATGAGTaGGGGGCCTGGGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AAWALVDGLLQAVHHLPVQGMHE*GAWAPG
Trigger: TCCAGGAGCCCAGGCCCCTCACTCATGCATTCCCTG...TACAGGGAGGTGGTGGACGGCCTGGAGAAGGCCATCTACAAGGGCCCAGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp GACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTAGCCCAGCAACACAGCTaGCAACAGCAGAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: DTARSRRRSAGARLAPSVAQQHS*QQQRRG
Trigger: GCCCCGCCTCTGCTGTTGGCAGCTGTGTTGCTGGGC...TACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GSEDSPTRCLASLGALRVARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...GACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp CAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: QVWHKWLASPLCRASARLPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...CAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCACTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: TARSRRRSAGARLAPSVPLQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...TGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: SGRRPRPRCALHLGHSPETAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...CTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGTAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: TSGWLLPCVGPLRVWGRACTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...GGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCCAGTGGGCCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTACGATTGGTAGTGTGTaGACTCAAAGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ASGPGVPPRTQPARGPALTIGSV*TQSSCS
Trigger: GGAGCAGCTGCTTTGAGTGCACACACTACCAATCGT...AAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: HSPEPQKVSRSTSGTFSTRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...GGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGGGGCAGTCAGGGCCCTaGTTCGCTGCCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: CCSSERLACQGAGLGRGVGQSGP*FAAWAL
Trigger: AAGGGCCCAGGCAGCGAAGCAGGGCCCTGACTGCCC...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCGGGCAGTCAGGGCCCTaGTTCGCTGCCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SSERLACQGAGLGRGVLCGQSGP*FAAWAL
Trigger: AAGGGCCCAGGCAGCGAAGCAGGGCCCTGACTGCCC...GCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCGGGCAGTCAGGGCCCTaGTTCGCTGCCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LHLGHSPEPQKVSRSTSGGQSGP*FAAWAL
Trigger: AAGGGCCCAGGCAGCGAAGCAGGGCCCTGACTGCCC...GCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAAGCAGGGGGGCAGTCAGGGCCCTaGTTCGCTGCCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SWWWVAVVSSLYAAEKAGGQSGP*FAAWAL
Trigger: AAGGGCCCAGGCAGCGAAGCAGGGCCCTGACTGCCC...CCCTGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp CTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGGTGCCTCGGCCGAGGTGTaGTTTGCATTTAGGACACAG +
Preference number: 4 (lower is better)
Translates to: LLPCVGPLRVWGRALGGGASAEV*FAFRTQ
Trigger: CTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC...ACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCGCGGGCAGCCCTAGCTaGCCCAGAAGCCCCACGACG +
Preference number: 4 (lower is better)
Translates to: RCALHLGHSPEPQKVSRSAGSPS*PRSPTT
Trigger: CGTCGTGGGGCTTCTGGGGCAGCTAGGGCTGCCCGC...GCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000403710.5
ENST00000407537.5
ENST00000678868.1
CDS-3UTR GCA 90 bp CGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGACCAGTGGGCCAGGCGTaGCACCCAGAACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RRRSAGARLAPSVPGWVRPVGQA*HPEPSQ
Trigger: CTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGG...TCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGCCCCTGGCCTAGCTaGAGGAGGGCTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: PVLQFREVSMSGRRPRPRCPWPS*RRADLC
Trigger: GCAGAGGTCAGCCCTCCTGCAGCTAGGCCAGGGGCA...CCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCCTTGTGTCGGGCCTCTaGGCGTCTGGGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: CFAFRTQPGAAEGQQEHVLVSGL*ASGAGP
Trigger: GGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAG...GACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCCTTGTGTCGGGCCTCTaGGCGTCTGGGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RCALHLGHSPEPQKVSRSLVSGL*ASGAGP
Trigger: GGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAG...GCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCGAGCCAGCCTTCTCGTaGCCTCTGGTGCCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTEPAFS*PLVPSG
Trigger: ACCCGAGGGCACCAGAGGGCACGAGAAGGCTGGCTC...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp CCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGGAGCCAGCCTTCTCGTaGCCTCTGGTGCCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: PVLQFREVSMSGRRPRPREPAFS*PLVPSG
Trigger: ACCCGAGGGCACCAGAGGGCACGAGAAGGCTGGCTC...CCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCGGGGAGGGGCGCCAGTaGTCTGTGCTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCALHLGHSGEGRQ*SVLLLQ
Trigger: CTGCAGGAGGAGCACAGAGCACTGGCGCCCCTCCCC...GCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp TCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCTGGACTTCTCGGGTTaGGCCAGGGGACTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SGRRPRPRCALHLGHSPELDFSG*ARGLRS
Trigger: GCTCCTGAGTCCCCTGGCGCAACCCGAGAAGTCCAG...CTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp AGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTCTGGGCCAGGGAATaGATGAGTGAGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPTGLAAVLVVGGGRFQPVWARE*MSEGPG
Trigger: CCCAGGCCCCTCACTCATGCATTCCCTGGCCCAGAC...AGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGGAGAAAGGCCAGCCCTaGCGCCCACAACAGTGTACC +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGEKGQP*RPQQCT
Trigger: GGTACACTGTTGTGGGCGGCAGGGCTGGCCTTTCTC...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR CCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCGCAGTAGGTGTCAATaGCCTCCAGCACGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGRSRCQ*PPARSV
Trigger: CACAGAGCGTGCTGGAGGCCATTGACACCTACTGCG...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RAQASAEVCFAFRTQPGACRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: ARSRRRSAGARLAPSVPGPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...GCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp ATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGATGGCTGGGAGGCCAGTaGGCCAGGCGTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: IQCCSSERLACQGAGLGRWLGGQ*ARRATQ
Trigger: CTGGGTGGCACGCCTGGCCCACTGGCCTCCCAGCCA...TCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTACCTCTGCACCACTGTaGCTGGGAGGCCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASAEVCFAFRTQPGAAEGTSAPL*LGGQWA
Trigger: GGCCCACTGGCCTCCCAGCCACAGTGGTGCAGAGGT...ACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCACCTCTGCACCACTGTaGCTGGGAGGCCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPTSAPL*LGGQWA
Trigger: GGCCCACTGGCCTCCCAGCCACAGTGGTGCAGAGGT...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGTACCTCTGCACCACTGTaGCTGGGAGGCCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGASQALSPGVESWLGAGTSAPL*LGGQWA
Trigger: GGCCCACTGGCCTCCCAGCCACAGTGGTGCAGAGGT...ACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGCCACTCTGTGCCACATaGGGCCCAGAGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKPLCAT*GPEGLV
Trigger: CACCAGCCCCTCTGGGCCCCATGTGGCACAGAGTGG...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCCCTGGGCCTGGGAACTaGGCCCTTGGAGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LGHSPEPQKVSRSTSGTFPGPGN*ALGASE
Trigger: CTCAGAGGCTCCAAGGGCCCAGTTCCCAGGCCCAGG...GAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGGGCCCTGGGTGGAGGTaGTCCCAGGTGCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: SAEVCFAFRTQPGAAEGQGPGWR*SQVPIC
Trigger: GCAGATGGGCACCTGGGACCACCTCCACCCAGGGCC...CTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCGGCCCTGGGTGGAGGTaGTCCCAGGTGCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAGPGWR*SQVPIC
Trigger: GCAGATGGGCACCTGGGACCACCTCCACCCAGGGCC...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCGGCCCTGGGTGGAGGTaGTCCCAGGTGCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: LHLGHSPEPQKVSRSTSGGPGWR*SQVPIC
Trigger: GCAGATGGGCACCTGGGACCACCTCCACCCAGGGCC...GCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGTCTGGGGCAGGGCCCTaGGTGGAGGTGGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AEVCFAFRTQPGAAEGQQSGAGP*VEVVPG
Trigger: ACCTGGGACCACCTCCACCCAGGGCCCTGCCCCAGA...CTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGTCTGGGGCAGGGCCCTaGGTGGAGGTGGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CCSSERLACQGAGLGRGVSGAGP*VEVVPG
Trigger: ACCTGGGACCACCTCCACCCAGGGCCCTGCCCCAGA...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTAGCGTTAGCCAGGTCTGGCACAAGTaGCTGGCTTCTCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: PGVPPRTQPARGPALSVSQVWHK*LASPLC
Trigger: ACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTG...GCTAACGCTAAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCAGGGCCCTGGGTGGAGGTTCTGCCACTCAGGTCTaGCACAAGTGGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLPCVGPLRVWGRALGGGSATQV*HKWLAS
Trigger: AGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGA...ACCTCCACCCAGGGCCCTGCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGCCTTCTCGTGCCCTCTaGTGCCCTCGGGTAGACAGA +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGPSRAL*CPRVDR
Trigger: TCTGTCTACCCGAGGGCACCAGAGGGCACGAGAAGG...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR CCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTGTGTCCCAAGCCCAGTaGAGGATCACAGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGVSQAQ*RITEPL
Trigger: GAGTGGCTCTGTGATCCTCCACTGGGCTTGGGACAC...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp GCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTTGCAGCTGTCCTGGTaGTGGGTGGCGGTCGTTTCC +
Preference number: 4 (lower is better)
Translates to: ARSRRRSAGARLAPSVPGLQLSW*WVAVVS
Trigger: GGAAACGACCGCCACCCACCACCAGGACAGCTGCAA...GCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp AAGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCGGCTTGCAGCTGTCCTaGTGGTGGGTGGCGGTCGTT +
Preference number: 4 (lower is better)
Translates to: KQLLPRTCARKSGAPGQIGLQLS*WWVAVV
Trigger: AACGACCGCCACCCACCACCAGGACAGCTGCAAGCC...GATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
3UTR CAA 72 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTaGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCA*HLGHSPEPQKV
Trigger: GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGCCTTGGTGTCACCCATaGGCAGGTTGTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGPWCHP*AGCGWA
Trigger: AGCCCATCCACAACCTGCTCATGGGTGACACCAAGG...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCCCTTGGTGTCACCCATaGGCAGGTTGTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAPWCHP*AGCGWA
Trigger: AGCCCATCCACAACCTGCTCATGGGTGACACCAAGG...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: SRSTSGTFSTRLGERAREEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...CTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERAREGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: LGHSPEPQKVSRSTSGTFEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...GAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GCTTCTGCTAGTGCTGGTTCCTTCCAATCCGTGTCCAGGGTCCAGCGGCCCTACGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ASASAGSFQSVSRVQRPYGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...GTAGGGCCGCTGGACCCTGGACACGGATTGGAAGGAACCAGCACTAGCAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR TCA 90 bp TTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FRTQPGAAEGQQEHVWHLGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...AAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGAGGTGGCTAGCAGTCTaGCCCCTTGGAGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWRWLAV*PLGGDG
Trigger: CCCATCTCCTCCAAGGGGTCAGACTGCTAGCCACCT...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGCAGCTAGCACAGGGTTaGTTCCTGTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWQLAQG*FLSWAW
Trigger: CCAGGCCCAGGACAGGAATCAACCCTGTGCTAGCTG...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCTGGTCTCGGTGCAGGTaGACTCAGCTAGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: SGTSGWLLPCVGPLRVWGWSRCR*TQLAQG
Trigger: ACCCTGTGCTAGCTGAGTTCACCTGCACCGAGACCA...GCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGATGTGCCTCAGTTGCCTaGCGTGTCAGCGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARCASVA*RVSARE
Trigger: CTCCCTGGCGCTGACACGTCAGGCAACTGAGGCACA...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR TCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCCAGGGAATGCATGAGTaGGGGGCCTGGGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPQGMHE*GAWAPG
Trigger: TCCAGGAGCCCAGGCCCCTCACTCATGCATTCCCTG...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR TCA 90 bp TCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAAGCAGGGCGGCTGCAAGGTCAGTaGGGTCAGGGGACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SWWWVAVVSSLYAAEKAGRLQGQ*GQGTAP
Trigger: TGGGGCTGTCCCCTGACCTCACTGACCTTGCAGCCG...CCCTGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR TCA 90 bp CGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGACGGCTGCAAGGTCAGTaGGGTCAGGGGACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RRRSAGARLAPSVPGWVRRLQGQ*GQGTAP
Trigger: TGGGGCTGTCCCCTGACCTCACTGACCTTGCAGCCG...TCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR TCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGAAGGTCCTGCTGTGCTaGCTGCACCTGTGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGKVLLC*LHLWSP
Trigger: GGGAGACCACAGGTGCAGTCAGCACAGCAGGACCTT...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676678.1
CDS-3UTR GCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGGCCCAGCAACACAGCTaGCAACAGCAGAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALAQQHS*QQQRRG
Trigger: GCCCCGCCTCTGCTGTTGGCAGCTGTGTTGCTGGGC...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTTGGTTCAGGATGCGCTaGTCCTTGGTGTCACCCATG +
Preference number: 4 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSWFRMR*SLVSPM
Trigger: CATGGGTGACACCAAGGAGCAGCGCATCCTGAACCA...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: ARSRRRSAGARLAPSVPGARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...GCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: EPQKVSRSTSGTFSTRLGFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...ACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCTTCCGCTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SGAPGQITLSASSTVPFRFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...GCGGAAGGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp CCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PVLQFREVSMSGRRPRPRFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...CCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGTTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LGASQALSPGVESWLGAGFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...ACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: LGHSPEPQKVSRSTSGTFTAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...GAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCTTCCGCACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: SGAPGQITLSASSTVPFRTAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...GCGGAAGGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp GCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: AFRTQPGAAEGQQEHVWHRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...GTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCTTCCGCAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SGAPGQITLSASSTVPFRRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...GCGGAAGGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: TARSRRRSAGARLAPSVPRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...TGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGGCAGTCAGGGCCCTaGTTCGCTGCCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSGQSGP*FAAWAL
Trigger: AAGGGCCCAGGCAGCGAAGCAGGGCCCTGACTGCCC...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCCCAGTGGGCCAGGCGTaGCACCCAGAACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CFAFRTQPGAAEGQQEHVPVGQA*HPEPSQ
Trigger: CTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGG...GACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACCCAGTGGGCCAGGCGTaGCACCCAGAACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VSMSGRRPRPRCALHLGHPVGQA*HPEPSQ
Trigger: CTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGG...GTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGTCATGGGGCTAACAGGTaGCCCTGGCCTAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGASQALSPGVESWLGAGHGANR*PWPSCR
Trigger: CCTGCAGCTAGGCCAGGGGCACCTGTTAGCCCCATG...ACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTAGCGTTAGCGCTGGTCTGAGCCATTaGCTCTTCTGTAAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PGVPPRTQPARGPALSVSAGLSH*LFCKQG
Trigger: GCCTTGCTTACAGAAGAGGCAATGGCTCAGACCAGC...GCTAACGCTAAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCGGAGGTGGTCCCAGGTaGCCATCTGCTGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTGGGPR*PSAVSC
Trigger: GCAGGACACAGCAGATGGGCACCTGGGACCACCTCC...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGCCTTGTGCCTCAGTTaGCTGACGTGTCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: QVWHKWLASPLCRASARLALCLS*LTCQRQ
Trigger: CTGGCGCTGACACGTCAGGCAACTGAGGCACAAGGC...CAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR GCA 90 bp AATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGGGGGAGGGGCGCCAGTaGTCTGTGCTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NPVLQFREVSMSGRRPRPGEGRQ*SVLLLQ
Trigger: CTGCAGGAGGAGCACAGAGCACTGGCGCCCCTCCCC...CGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp GGGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTATCTCCTTGGTCCTGTaGCGTTTCTGCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GKRGQPHPLSSLTRGTQGISLVL*RFCPGV
Trigger: GACACCAGGGCAGAAACGGCACAGGACCAAGGAGAT...ACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GTCCAGCGGCCCTACCTAGCCAGGCATGGGGGCTGTGCCCCTCGTGCTCCTAGTGCCCAAAGTCCTGTGTaGCCTGACTCCCATTGTTCC +
Preference number: 4 (lower is better)
Translates to: VQRPYLARHGGCAPRAPSAQSPV*PDSHCS
Trigger: GGAACAATGGGAGTCAGGGCACACAGGACTTTGGGC...ACTAGGAGCACGAGGGGCACAGCCCCCATGCCTGGCTAGGTAGGGCCGCTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACGAGTCCCACAGGGCTTaGAGCTGTCCTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AFRTQPGAAEGQQEHVWHESHRA*SCPGGG
Trigger: CCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTC...GTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp ACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCACGTGCTGGTCACCCATaGTCTGGACGCCCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TARSRRRSAGARLAPSVPRAGHP*SGRPRD
Trigger: ATCCCTGGGGCGTCCAGAGCATGGGTGACCAGCACG...TGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR CCA 90 bp CACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HSPEPQKVSRSTSGTFSTACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...GGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGCGCAGTAGGTGTCAATaGCCTCCAGCACGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGRSRCQ*PPARSV
Trigger: CACAGAGCGTGCTGGAGGCCATTGACACCTACTGCG...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCTTCCGCAGCTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: GAPGQITLSASSTVPFRSCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...GCTGCGGAAGGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCTGGGGGATGATGTCCTaGGACGCTCCAACCACAAGG +
Preference number: 4 (lower is better)
Translates to: SGTSGWLLPCVGPLRVWGWGMMS*DAPTTR
Trigger: CCTTGTGGTTGGAGCGTCCCAGGACATCATCCCCCA...GCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPTGLAAVLVVGGGRFQPPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...AGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp TGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCGAAGCCCCACGACGATaGCGGCAATGGCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: CFAFRTQPGAAEGQQEHVEAPRR*RQWRWR
Trigger: GCGCCACCGCCATTGCCGCCATCGTCGTGGGGCTTC...GACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361682.11
ENST00000403710.5
CDS-3UTR CCA 90 bp TCTGCCACTCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTCCACTCTGTGCCACATaGGGCCCAGAGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SATQVWHKWLASPLCRASPLCAT*GPEGLV
Trigger: CACCAGCCCCTCTGGGCCCCATGTGGCACAGAGTGG...AGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGCAGGGATGCGGGAGCTaGTCTGAGCCATTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGQGCGS*SEPLPL
Trigger: AAGAGGCAATGGCTCAGACCAGCTCCCGCATCCCTG...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCCTGGGCCTGGGAACTaGGCCCTTGGAGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALPGPGN*ALGASE
Trigger: CTCAGAGGCTCCAAGGGCCCAGTTCCCAGGCCCAGG...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCTGGGCCTGGGAACTaGGCCCTTGGAGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCALHLGHSPGPGN*ALGASE
Trigger: CTCAGAGGCTCCAAGGGCCCAGTTCCCAGGCCCAGG...GCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCTCCATAGGAGTGGGCTaGCTGGGGGCTAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KVSRSTSGTFSTRLGERASIGVG*LGASQA
Trigger: GGCCTGGCTAGCCCCCAGCCAGCCCACTCCTATGGA...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCTCTGGCACAAGTGGCTaGCTTCTCCCTTGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: SGTSGWLLPCVGPLRVWGSGTSG*LLPCVG
Trigger: CCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA...GCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCAGGTGTGTGCCTCTaGCAGTCCTGTGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQAGVCL*QSCVEP
Trigger: AGGCTCCACACAGGACTGCCAGAGGCACACACCTGC...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR CCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAACACGCCCCTTTGCTTaGAGTGCCACCATCGCCCCC +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARTRPFA*SATIAP
Trigger: GGGGGCGATGGTGGCACTCCAAGCAAAGGGGCGTGT...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR CCA 90 bp AGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTTGTCCTGGTGGTGGGTaGCGGTCGTTTCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SPTGLAAVLVVGGGRFQPCPGGG*RSFPAC
Trigger: ACAGGCTGGAAACGACCGCCACCCACCACCAGGACA...AGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp GACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCTCTGGGATGGGCCTaGAGAGTCCCACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: DTARSRRRSAGARLAPSVPLGWA*RVPQGL
Trigger: CAAGCCCTGTGGGACTCTCCAGGCCCATCCCAGAGG...TACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp TCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCTTCCGCCGCAGCCATAGGGCATaGCCCGTGGGGTCCACTATC +
Preference number: 4 (lower is better)
Translates to: SGAPGQITLSASSTVPFRRSHRA*PVGSTI
Trigger: GATAGTGGACCCCACGGGCCATGCCCTATGGCTGCG...GCGGAAGGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR TCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGTCTTCAAAGCACCTCTaGGCAGGCTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWSSKHL*AGSSPL
Trigger: CAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGA...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000428707.2
ENST00000676678.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCTCTTCAAAGCACCTCTaGGCAGGCTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSPEPQKVSRSTSGTFSTSSKHL*AGSSPL
Trigger: CAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGA...GGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000428707.2
ENST00000676678.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: LQFREVSMSGRRPRPRCAEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...AGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SERLACQGAGLGRGVLCIGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...AATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FAFRTQPGAAEGQQEHVWGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...CCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCCATGCGCACAGCTaGGTAGCCACAGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSGHAHS*VATVGP
Trigger: GGGGCCTACTGTGGCTACTCAGCTGTGCGCATGGCC...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGTCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QVWHKWLASPLCRASARLSSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...CAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCGGTGTGAATGCTGGCTaGCTCCTCTTCGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGTSGWLLPCVGPLRVWGGVNAG*LLFVSQ
Trigger: CTGGGAAACGAAGAGGAGTCAGCCAGCATTCACACC...GCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCCAGCTAGCACAGGGTTaGTTCCTGTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVQLAQG*FLSWAW
Trigger: CCAGGCCCAGGACAGGAATCAACCCTGTGCTAGCTG...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCCAGACAGAAGCCTGGTaGGGGGACCCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSERLACQGAGLGRGVLCQTEAW*GDPAGR
Trigger: TCTGCCTGCTGGGTCCCCTCACCAGGCTTCTGTCTG...GCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407537.5
ENST00000678255.1
CDS-3UTR TCA 90 bp CCTGGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTTGCAGGCAGGTGCCTTaGAACACTGGTATCCGACCC +
Preference number: 4 (lower is better)
Translates to: PGESHRACSCPGGGWRSFCRQVP*NTGIRP
Trigger: GGGTCGGATACCAGTGTTTCAAGGCACCTGCCTGCA...AAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR GCA 90 bp GTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACGCCCAGCAACACAGCTaGCAACAGCAGAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VSMSGRRPRPRCALHLGHAQQHS*QQQRRG
Trigger: GCCCCGCCTCTGCTGTTGGCAGCTGTGTTGCTGGGC...GTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGGCCCAGCAACACAGCTaGCAACAGCAGAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: CALHLGHSPEPQKVSRSTAQQHS*QQQRRG
Trigger: GCCCCGCCTCTGCTGTTGGCAGCTGTGTTGCTGGGC...CGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GGAAGCGAGGACAGCCCCACCCGCTGTCTAGCCTCACTCGGGGCACTCAGGGTCAGGTTGTGGATGGGCTaGAGGATGAACTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GSEDSPTRCLASLGALRVRLWMG*RMNSFQ
Trigger: CTGGAACGAGTTCATCCTGCAGCCCATCCACAACCT...GACCCTGAGTGCCCCGAGTGAGGCTAGACAGCGGGTGGGGCTGTCCTCGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp CACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: HSPEPQKVSRSTSGTFSTARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...GGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTGTCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: TPSPWSCAVSALVSGLGCPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...ACACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp AGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: SSERLACQGAGLGRGVLCPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...GCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCAGGCCACATTCCTCCAAGAGAAGCGTGTCCGGCAGGTACCGGTCCTTCCAGTTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AGHIPPREACPAGTGPSSFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...ACTGGAAGGACCGGTACCTGCCGGACACGCTTCTCTTGGAGGAATGTGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000207636.9
CDS-3UTR GCA 90 bp TTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LQFREVSMSGRRPRPRCAFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...AGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTGTTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TPSPWSCAVSALVSGLGCFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...ACACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp TCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SAEVCFAFRTQPGAAEGQFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...CTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAAGCAGGGTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SWWWVAVVSSLYAAEKAGFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...CCCTGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp CCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PRCALHLGHSPEPQKVSRFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...CCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: RCALHLGHSPEPQKVSRSLQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...GCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGCTAGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: VLGSLAHLGRSRCQPVALLQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...CAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp GTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: VSMSGRRPRPRCALHLGHLQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...GTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: EVCFAFRTQPGAAEGQQELQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...CTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTGTACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: TPSPWSCAVSALVSGLGCTAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...ACACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALTAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQFREVSMSGRRPRPRCATAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...AGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGCTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQCTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: AEVCFAFRTQPGAAEGQQRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...CTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: LQFREVSMSGRRPRPRCARALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...AGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: CSSERLACQGAGLGRGVLRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...AAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGGCAGTCAGGGCCCTaGTTCGCTGCCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: REVSMSGRRPRPRCALHLGQSGP*FAAWAL
Trigger: AAGGGCCCAGGCAGCGAAGCAGGGCCCTGACTGCCC...TAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CTTCGCTGCCTGGGCCCTTGTAGATGGCCTTCTCCAGGCCGTCCACCACCTCCCGCCTCGGCCGAGGTGTaGTTTGCATTTAGGACACAG +
Preference number: 4 (lower is better)
Translates to: LRCLGPCRWPSPGRPPPPASAEV*FAFRTQ
Trigger: CTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC...GGGAGGTGGTGGACGGCCTGGAGAAGGCCATCTACAAGGGCCCAGGCAGCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp CCCTGCTTCGCTGCCTGGGCCCTTGTAGATGGCCTTCTCCAGGCCGTCCACCACGCCTCGGCCGAGGTGTaGTTTGCATTTAGGACACAG +
Preference number: 4 (lower is better)
Translates to: PCFAAWALVDGLLQAVHHASAEV*FAFRTQ
Trigger: CTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC...GTGGTGGACGGCCTGGAGAAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp GTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACTGCCCCTGGCCTAGCTaGAGGAGGGCTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: VCFAFRTQPGAAEGQQEHCPWPS*RRADLC
Trigger: GCAGAGGTCAGCCCTCCTGCAGCTAGGCCAGGGGCA...GTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTGCCCCTGGCCTAGCTaGAGGAGGGCTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: SERLACQGAGLGRGVLCICPWPS*RRADLC
Trigger: GCAGAGGTCAGCCCTCCTGCAGCTAGGCCAGGGGCA...AATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTCATGGGGCTAACAGGTaGCCCTGGCCTAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCHGANR*PWPSCR
Trigger: CCTGCAGCTAGGCCAGGGGCACCTGTTAGCCCCATG...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGCATGGGGCTAACAGGTaGCCCTGGCCTAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRCALHLGHSPEPQKVSRHGANR*PWPSCR
Trigger: CCTGCAGCTAGGCCAGGGGCACCTGTTAGCCCCATG...CCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCAACTACAGGGATaGGGGAGCTGGTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HSPEPQKVSRSTSGTFSTRQLQG*GSWSEP
Trigger: TGGCTCAGACCAGCTCCCGCATCCCTGTAGTTGCCT...GGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCATCCCAGGTGCCCATCTaGTGTGTCCTGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TARSRRRSAGARLAPSVPSQVPI*CVLQRL
Trigger: GAGCCTCTGCAGGACACAGCAGATGGGCACCTGGGA...TGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCCCCCTTTGCTTGGAGTaGCACCATCGCCCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTPLCLE*HHRPLV
Trigger: CACAAGGGGGCGATGGTGGCACTCCAAGCAAAGGGG...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp GACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTAACCCACACGCCCCTTTaGTTGGAGTGCCACCATCGC +
Preference number: 4 (lower is better)
Translates to: DTARSRRRSAGARLAPSVTHTPL*LECHHR
Trigger: GCGATGGTGGCACTCCAAGCAAAGGGGCGTGTGGGT...TACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp CCACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTCCAGACCTCAGGTGGTaGCTCCAGAGCGAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PPHLLGPVPFLPWCLVWGPDLRW*LQSELC
Trigger: ACACAGCTCGCTCTGGAGGCACCACCTGAGGTCTGG...ACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GCTTCTGCTAGTGCTGGTTCCTTCCAATCCGTGTCCAGGGTCCAGCGGCCCTACGTCTGGTCTGGGGTGTaGACCCCACTTCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: ASASAGSFQSVSRVQRPYVWSGV*TPLLPP
Trigger: GGGTGGCAGAAGTGGGGTGCACACCCCAGACCAGAC...GTAGGGCCGCTGGACCCTGGACACGGATTGGAAGGAACCAGCACTAGCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp CCACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTGCTGGGTTGGGGGAATaGACAAGATGGGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPHLLGPVPFLPWCLVWGAGLGE*TRWGLR
Trigger: CCTGAGGCCCCATCTTGTGCATTCCCCCAACCCAGC...ACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAGTCTGGGCCAGGGAATaGATGAGTGAGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AAVLVVGGGRFQPVCCREVWARE*MSEGPG
Trigger: CCCAGGCCCCTCACTCATGCATTCCCTGGCCCAGAC...TTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp TGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCCTTGAGCAGGGCGGCTaGCTTCCAGTCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CFAFRTQPGAAEGQQEHVLEQGG*LPVWAR
Trigger: CCTGGCCCAGACTGGAAGGCAGCCGCCCTGCTCAAG...GACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp TTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCCATGTGGTGAGCCCGTaGTGGTCACCCATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGHSPEPQKVSRSTSGTFHVVSP*WSPMLW
Trigger: CCAGAGCATGGGTGACCAGCACGGGCTCACCACATG...GAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR CCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCCCCATGAGCAGGTTGTaGATGGGCTGCAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: RAQASAEVCFAFRTQPGAPMSRL*MGCRMN
Trigger: GTTCATCCTGCAGCCCATCCACAACCTGCTCATGGG...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGCCCATGAGCAGGTTGTaGATGGGCTGCAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: GARLAPSVPGWVREPERGPMSRL*MGCRMN
Trigger: GTTCATCCTGCAGCCCATCCACAACCTGCTCATGGG...CCCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGCGCAGTAGGTGTCAATaGCCTCCAGCACGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGRSRCQ*PPARSV
Trigger: CACAGAGCGTGCTGGAGGCCATTGACACCTACTGCG...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGCGCAGTAGGTGTCAATaGCCTCCAGCACGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQRSRCQ*PPARSV
Trigger: CACAGAGCGTGCTGGAGGCCATTGACACCTACTGCG...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGATGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: AFRTQPGAAEGQQEHVWHCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...GTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGAAATCCACCATCCGCTaGGTGATGGCGGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: SGRRPRPRCALHLGHSPEKSTIR*VMAAQS
Trigger: CGACTGTGCCGCCATCACCCAGCGGATGGTGGATTT...CTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CCTGGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTGAAGTCTGGCGCACCTaGGCAGATCACGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PGESHRACSCPGGGWRSFEVWRT*ADHVVS
Trigger: GCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTC...AAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp TCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGGAAGTCTGGCGCACCTaGGCAGATCACGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SGRRPRPRCALHLGHSPEEVWRT*ADHVVS
Trigger: GCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTC...CTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GTGTGCACTCAAAGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCACCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: VCTQSSCSRARVLGSLAHPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...GTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCCCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGACCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGCCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: PVLQFREVSMSGRRPRPRPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...CCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGCAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCCCACTCTGTGCCACATaGGGCCCAGAGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CFAFRTQPGAAEGQQEHVPLCAT*GPEGLV
Trigger: CACCAGCCCCTCTGGGCCCCATGTGGCACAGAGTGG...GACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCTCCATAGGAGTGGGCTaGCTGGGGGCTAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RCALHLGHSPEPQKVSRSSIGVG*LGASQA
Trigger: GGCCTGGCTAGCCCCCAGCCAGCCCACTCCTATGGA...GCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCTCTGTTTCTGGTCCCTaGGTGGCCCCAAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: RAQASAEVCFAFRTQPGASVSGP*VAPNLS
Trigger: GGACAAGTTTGGGGCCACCCAGGGACCAGAAACAGA...GGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCCAGAGGCTCTGTTTCTaGTCCCTGGGTGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: HSPEPQKVSRSTSGTFSTQRLCF*SLGGPK
Trigger: TTTGGGGCCACCCAGGGACCAGAAACAGAGCCTCTG...GGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTACACGCCCCTTTGCTTaGAGTGCCACCATCGCCCCC +
Preference number: 4 (lower is better)
Translates to: CSSERLACQGAGLGRGVLTRPFA*SATIAP
Trigger: GGGGGCGATGGTGGCACTCCAAGCAAAGGGGCGTGT...AAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR CCA 90 bp GGTGGGTGTCCCAAGCCCAGTGGAGGATCACAGAGCCACTCAGTGTCGCTGACCCCCACCCCATCTCCTTaGTCCTGTGCCGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GGCPKPSGGSQSHSVSLTPTPSP*SCAVSA
Trigger: GGCAGAAACGGCACAGGACCAAGGAGATGGGGTGGG...GGTCAGCGACACTGAGTGGCTCTGTGATCCTCCACTGGGCTTGGGACACCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp CTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAAGCAAGGGGCCTGGGCTCCTaGACTTCTCGGGTTGCGCCA +
Preference number: 4 (lower is better)
Translates to: LSWWWVAVVSSLYAAEKARGLGS*TSRVAP
Trigger: TGGCGCAACCCGAGAAGTCCAGGAGCCCAGGCCCCT...TGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp GTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGGGGCCTGGGCTCCTaGACTTCTCGGGTTGCGCCA +
Preference number: 4 (lower is better)
Translates to: VSMSGRRPRPRCALHLGHRGLGS*TSRVAP
Trigger: TGGCGCAACCCGAGAAGTCCAGGAGCCCAGGCCCCT...GTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp TTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCGGCTTGCAGCTGTCCTaGTGGTGGGTGGCGGTCGTT +
Preference number: 4 (lower is better)
Translates to: LHLGHSPEPQKVSRSTSGGLQLS*WWVAVV
Trigger: AACGACCGCCACCCACCACCAGGACAGCTGCAAGCC...GCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp CCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGGTGGTGAGCCCGTGCTaGTCACCCATGCTCTGGACG +
Preference number: 4 (lower is better)
Translates to: PRCALHLGHSPEPQKVSRVVSPC*SPMLWT
Trigger: CGTCCAGAGCATGGGTGACCAGCACGGGCTCACCAC...CCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR CCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCTATGGTGCAGCCCCTTaGCCTCATGTGGTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPYGAAP*PHVVSP
Trigger: CGGGCTCACCACATGAGGCCAAGGGGCTGCACCATA...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR CCA 90 bp TTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCGGTAGGGAAGCCCCATaGCCCGGAGTTGGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LHLGHSPEPQKVSRSTSGGREAP*PGVGGS
Trigger: ACTACCCCCAACTCCGGGCCATGGGGCTTCCCTACC...GCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678255.1
3UTR CAA 72 bp TCCATAGGAGTGGGCTGGCTGGGGGCTAGCCAGGCCTaGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SIGVGWLGASQA*SPGVESWLGAG
Trigger: ACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAGCCAGCCCACTCCTATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTGTCTGGGGTCTCCTCTaGGCTCGGCAGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: RTCARKSGAPGQITLSASVWGLL*ARQQSR
Trigger: TCTGCTTTGCTGCCGAGCTCAGAGGAGACCCCAGAC...ACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000207636.9
ENST00000428707.2
CDS-3UTR TCA 90 bp ACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTGTGTCTGGGGTCTCCTCTaGGCTCGGCAGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TPSPWSCAVSALVSGLGCVWGLL*ARQQSR
Trigger: TCTGCTTTGCTGCCGAGCTCAGAGGAGACCCCAGAC...ACACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR TCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGTCTGGGGTCTCCTCTaGGCTCGGCAGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCVWGLL*ARQQSR
Trigger: TCTGCTTTGCTGCCGAGCTCAGAGGAGACCCCAGAC...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGTCTTCAAAGCACCTCTaGGCAGGCTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKSSKHL*AGSSPL
Trigger: CAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGA...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000428707.2
ENST00000676678.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGACCTTGGTGTCACCCATaGGCAGGTTGTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARPWCHP*AGCGWA
Trigger: AGCCCATCCACAACCTGCTCATGGGTGACACCAAGG...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCCCTTGGTGTCACCCATaGGCAGGTTGTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: LGHSPEPQKVSRSTSGTFPWCHP*AGCGWA
Trigger: AGCCCATCCACAACCTGCTCATGGGTGACACCAAGG...GAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTCCTTGGTGTCACCCATaGGCAGGTTGTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: EPQKVSRSTSGTFSTRLGPWCHP*AGCGWA
Trigger: AGCCCATCCACAACCTGCTCATGGGTGACACCAAGG...ACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp ACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: TCARKSGAPGQITLSASSEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...GCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR TCA 90 bp GAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: EVCFAFRTQPGAAEGQQEEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...CTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp ATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: IQCCSSERLACQGAGLGREGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...TCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CCACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTTCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PPHLLGPVPFLPWCLVWGSSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...ACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR TCA 90 bp GACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTATCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: DTARSRRRSAGARLAPSVSSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...TACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGTCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKSSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGGGTGTGAATGCTGGCTaGCTCCTCTTCGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGGVNAG*LLFVSQ
Trigger: CTGGGAAACGAAGAGGAGTCAGCCAGCATTCACACC...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTAGGTGGCTAGCAGTCTaGCCCCTTGGAGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCRWLAV*PLGGDG
Trigger: CCCATCTCCTCCAAGGGGTCAGACTGCTAGCCACCT...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTCAGCTAGCACAGGGTTaGTTCCTGTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCQLAQG*FLSWAW
Trigger: CCAGGCCCAGGACAGGAATCAACCCTGTGCTAGCTG...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCTGGTCTCGGTGCAGGTaGACTCAGCTAGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVWSRCR*TQLAQG
Trigger: ACCCTGTGCTAGCTGAGTTCACCTGCACCGAGACCA...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp ATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAAGAGCACAGGAGGCCTaGGGCAGAAGCCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IQCCSSERLACQGAGLGRRAQEA*GRSPGV
Trigger: AACCCCTGGGCTTCTGCCTCAGGCCTCCTGTGCTCT...TCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407537.5
ENST00000678255.1
CDS-3UTR TCA 90 bp AGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCGAAATCCTCCTGGTGTaGCCCTCCAGGCAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SSERLACQGAGLGRGVLCEILLV*PSRQVA
Trigger: GGCTACCTGCCTGGAGGGTCACACCAGGAGGATTTC...GCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407537.5
ENST00000678255.1
CDS-3UTR TCA 90 bp CCTGGAGAGTCCCACAGGGCTTGCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCAGGGGGCTTTCATGTaGCAGTATGGACACCACACG +
Preference number: 4 (lower is better)
Translates to: PGESHRACSCPGGGWRSFQGAFM*QYGHHT
Trigger: CGTGTGGTGTCCATACTGTCACATGAAAGCCCCCTG...AAACGACCGCCACCCACCACCAGGACAGCTGCAAGCCCTGTGGGACTCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp CCCTGCTTCGCTGCCTGGGCCCTTGTAGATGGCCTTCTCCAGGCCGTCCACCACAGGTTGTGGATGGGCTaGAGGATGAACTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PCFAAWALVDGLLQAVHHRLWMG*RMNSFQ
Trigger: CTGGAACGAGTTCATCCTGCAGCCCATCCACAACCT...GTGGTGGACGGCCTGGAGAAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000207636.9
ENST00000428707.2
CDS-3UTR GCA 90 bp GCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCAGGTTGTGGATGGGCTaGAGGATGAACTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ARSRRRSAGARLAPSVPGRLWMG*RMNSFQ
Trigger: CTGGAACGAGTTCATCCTGCAGCCCATCCACAACCT...GCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGTGGTTCAGGATGCGCTaGTCCTTGGTGTCACCCATG +
Preference number: 4 (lower is better)
Translates to: QVWHKWLASPLCRASARLWFRMR*SLVSPM
Trigger: CATGGGTGACACCAAGGAGCAGCGCATCCTGAACCA...CAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGTGGTTCAGGATGCGCTaGTCCTTGGTGTCACCCATG +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGWFRMR*SLVSPM
Trigger: CATGGGTGACACCAAGGAGCAGCGCATCCTGAACCA...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGTGCACTCAAAGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCACGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: VCTQSSCSRARVLGSLAHARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...GTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: EVCFAFRTQPGAAEGQQEPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...CTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACCCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: VCFAFRTQPGAAEGQQEHPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...GTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VCFAFRTQPGAAEGQQEHFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...GTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SERLACQGAGLGRGVLCIFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...AATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTTCCCGGGCTCCGCATaGTGCAGCACGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CALHLGHSPEPQKVSRSTFPGSA*CSTWFR
Trigger: CCTGAACCACGTGCTGCAGCATGCGGAGCCCGGGAA...CGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCCCAGCTCCAGAAGACAGGTCTAACCTCATCCTCACCTGCCCAAAGTCCTGTGCTCCAGCACGCTCTGTaGGTTCCCGGGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: AQLQKTGLTSSSPAQSPVLQHAL*VPGLRM
Trigger: CATGCGGAGCCCGGGAACGCACAGAGCGTGCTGGAG...CACAGGACTTTGGGCAGGTGAGGATGAGGTTAGACCTGTCTTCTGGAGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR GCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSTAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: SERLACQGAGLGRGVLCITAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...AATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: FAFRTQPGAAEGQQEHVWTAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...CCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGACAGCAGGCGGGCCATaGGCACAGCTGAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: NPVLQFREVSMSGRRPRPTAGGP*AQLSSH
Trigger: GTGGCTACTCAGCTGTGCGCATGGCCCGCCTGCTGT...CGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTCTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGATGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARCTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAAGGGCCCTGCTTCGCTaGCTGGGCCCTTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: IQCCSSERLACQGAGLGRRALLR*LGPCRW
Trigger: CCATCTACAAGGGCCCAGGCAGCGAAGCAGGGCCCT...TCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACCATGGGGCTAACAGGTaGCCCTGGCCTAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSMSGRRPRPRCALHLGHHGANR*PWPSCR
Trigger: CCTGCAGCTAGGCCAGGGGCACCTGTTAGCCCCATG...GTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp ACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAAGGCAACTACAGGGATaGGGGAGCTGGTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TARSRRRSAGARLAPSVPRQLQG*GSWSEP
Trigger: TGGCTCAGACCAGCTCCCGCATCCCTGTAGTTGCCT...TGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGAGGCAACTACAGGGATaGGGGAGCTGGTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SRSTSGTFSTRLGERARERQLQG*GSWSEP
Trigger: TGGCTCAGACCAGCTCCCGCATCCCTGTAGTTGCCT...CTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTTCCCAGGTGCCCATCTaGTGTGTCCTGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FRTQPGAAEGQQEHVWHLSQVPI*CVLQRL
Trigger: GAGCCTCTGCAGGACACAGCAGATGGGCACCTGGGA...AAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCTCCCAGGTGCCCATCTaGTGTGTCCTGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCALHLGHSSQVPI*CVLQRL
Trigger: GAGCCTCTGCAGGACACAGCAGATGGGCACCTGGGA...GCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGGGAGGTGGTCCCAGGTaGCCATCTGCTGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NPVLQFREVSMSGRRPRPGGGPR*PSAVSC
Trigger: GCAGGACACAGCAGATGGGCACCTGGGACCACCTCC...CGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGGTCCTGTGTGGAGCCTaGAGGGTCACACTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FAFRTQPGAAEGQQEHVWVLCGA*RVTLPG
Trigger: GCCAGGGAGTGTGACCCTGCAGGCTCCACACAGGAC...CCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTTCTCGTGCCCTCTGGTaGCCTCGGGTAGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCSRALW*PRVDRA
Trigger: TGCTCTGTCTACCCGAGGGCACCAGAGGGCACGAGA...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGTCTCGTGCCCTCTGGTaGCCTCGGGTAGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALSRALW*PRVDRA
Trigger: TGCTCTGTCTACCCGAGGGCACCAGAGGGCACGAGA...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCCCTTTGCTTGGAGTaGCACCATCGCCCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCALHLGHSPLCLE*HHRPLV
Trigger: CACAAGGGGGCGATGGTGGCACTCCAAGCAAAGGGG...GCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp AGTGTGTGCACTCAAAGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGGTATCCGACCCCACATaGCTCTGGGATGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SVCTQSSCSRARVLGSLAVSDPT*LWDGPG
Trigger: TCCAGGCCCATCCCAGAGGCATGTGGGGTCGGATAC...CGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR GCA 90 bp AGTGTGTGCACTCAAAGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCCAAACCAGGATGGGTaGTCCTCACTAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: SVCTQSSCSRARVLGSLAPNQDG*SSLGHG
Trigger: GCCGTGGCCTAGTGAGGAGCACCCATCCTGGTTTGG...CGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR GCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCTCCTGCTGTGCTGACTaGACCTGTGGTCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPSCCAD*TCGLPE
Trigger: CTCTGGGAGACCACAGGTGCAGTCAGCACAGCAGGA...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676678.1
CDS-3UTR CCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGCCCATGAGCAGGTTGTaGATGGGCTGCAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGPMSRL*MGCRMN
Trigger: GTTCATCCTGCAGCCCATCCACAACCTGCTCATGGG...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CCSSERLACQGAGLGRGVACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LQFREVSMSGRRPRPRCAACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...AGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SAEVCFAFRTQPGAAEGQACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...CTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCCGCAGTAGGTGTCAATaGCCTCCAGCACGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVRSRCQ*PPARSV
Trigger: CACAGAGCGTGCTGGAGGCCATTGACACCTACTGCG...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RTCARKSGAPGQITLSASCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...ACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp GCTTCTGCTAGTGCTGGTTCCTTCCAATCCGTGTCCAGGGTCCAGCGGCCCTACTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: ASASAGSFQSVSRVQRPYCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...GTAGGGCCGCTGGACCCTGGACACGGATTGGAAGGAACCAGCACTAGCAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp GGTGGGTGTCCCAAGCCCAGTGGAGGATCACAGAGCCACTCAGTGTCGCTGACCAAATCCACCATCCGCTaGGTGATGGCGGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: GGCPKPSGGSQSHSVSLTKSTIR*VMAAQS
Trigger: CGACTGTGCCGCCATCACCCAGCGGATGGTGGATTT...GGTCAGCGACACTGAGTGGCTCTGTGATCCTCCACTGGGCTTGGGACACCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCAAATCCACCATCCGCTaGGTGATGGCGGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTKSTIR*VMAAQS
Trigger: CGACTGTGCCGCCATCACCCAGCGGATGGTGGATTT...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GAGGGTCAGAGGTGCCCAGAGAACCTGCCCCAAACCAGGATGGGTGCTCCTCACAAATCCACCATCCGCTaGGTGATGGCGGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: EGQRCPENLPQTRMGAPHKSTIR*VMAAQS
Trigger: CGACTGTGCCGCCATCACCCAGCGGATGGTGGATTT...GTGAGGAGCACCCATCCTGGTTTGGGGCAGGTTCTCTGGGCACCTCTGACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR CCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCAAATCCACCATCCGCTaGGTGATGGCGGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPKSTIR*VMAAQS
Trigger: CGACTGTGCCGCCATCACCCAGCGGATGGTGGATTT...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTAAATCCACCATCCGCTaGGTGATGGCGGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: EPQKVSRSTSGTFSTRLGKSTIR*VMAAQS
Trigger: CGACTGTGCCGCCATCACCCAGCGGATGGTGGATTT...ACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp ACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAAAATCCACCATCCGCTaGGTGATGGCGGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: TARSRRRSAGARLAPSVPKSTIR*VMAAQS
Trigger: CGACTGTGCCGCCATCACCCAGCGGATGGTGGATTT...TGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGTGGGGGATGATGTCCTaGGACGCTCCAACCACAAGG +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKWGMMS*DAPTTR
Trigger: CCTTGTGGTTGGAGCGTCCCAGGACATCATCCCCCA...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGTGGGGGATGATGTCCTaGGACGCTCCAACCACAAGG +
Preference number: 4 (lower is better)
Translates to: SRSTSGTFSTRLGERAREWGMMS*DAPTTR
Trigger: CCTTGTGGTTGGAGCGTCCCAGGACATCATCCCCCA...CTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGTACCGGTCCTTCCAGTaGTCGAGGAAGACCATGTCC +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQYRSFQ*SRKTMS
Trigger: GGACATGGTCTTCCTCGACCACTGGAAGGACCGGTA...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCTACCGGTCCTTCCAGTaGTCGAGGAAGACCATGTCC +
Preference number: 4 (lower is better)
Translates to: HSPEPQKVSRSTSGTFSTYRSFQ*SRKTMS
Trigger: GGACATGGTCTTCCTCGACCACTGGAAGGACCGGTA...GGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGAAGTCTGGCGCACCTaGGCAGATCACGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPEVWRT*ADHVVS
Trigger: GCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTC...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: FRTQPGAAEGQQEHVWHLPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...AAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGCCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: PRCALHLGHSPEPQKVSRPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...CCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: CCSSERLACQGAGLGRGVPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGCAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCCAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: ASAEVCFAFRTQPGAAEGQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...ACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: AFRTQPGAAEGQQEHVWHQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...GTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGACAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGAACAATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCTGGCTGGGAGGCCAGTaGGCCAGGCGTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: RTIQCCSSERLACQGAGLWLGGQ*ARRATQ
Trigger: CTGGGTGGCACGCCTGGCCCACTGGCCTCCCAGCCA...GAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGATTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGCAGGGATGCGGGAGCTaGTCTGAGCCATTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKQGCGS*SEPLPL
Trigger: AAGAGGCAATGGCTCAGACCAGCTCCCGCATCCCTG...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGCAGTCTGACCCCTTaGAGGAGATGGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: LGHSPEPQKVSRSTSGTFSSLTP*RRWGQL
Trigger: GAGCTGTCCCCATCTCCTCCAAGGGGTCAGACTGCT...GAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAAGCAGTCTGACCCCTTaGAGGAGATGGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARSSLTP*RRWGQL
Trigger: GAGCTGTCCCCATCTCCTCCAAGGGGTCAGACTGCT...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CTGGGGGCTAGCCAGGCCTTGAGCCCAGGAGTAGAATCTTGGCTAGGGGCTGGTCAGAGGCTCTGTTTCTaGTCCCTGGGTGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LGASQALSPGVESWLGAGQRLCF*SLGGPK
Trigger: TTTGGGGCCACCCAGGGACCAGAAACAGAGCCTCTG...ACCAGCCCCTAGCCAAGATTCTACTCCTGGGCTCAAGGCCTGGCTAGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCTCTGGCACAAGTGGCTaGCTTCTCCCTTGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: HVRAQASAEVCFAFRTQPSGTSG*LLPCVG
Trigger: CCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA...GGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGTCTGGCACAAGTGGCTaGCTTCTCCCTTGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKSGTSG*LLPCVG
Trigger: CCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGCCTCCGGCATCTCGTaGGGCACAGTGATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: AEVCFAFRTQPGAAEGQQASGIS*GTVMAS
Trigger: ACTTGCCATCACTGTGCCCCACGAGATGCCGGAGGC...CTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407537.5
CDS-3UTR CCA 90 bp TGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCCAGCTGTCCTGGTGGTaGGTGGCGGTCGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CFAFRTQPGAAEGQQEHVQLSWW*VAVVSS
Trigger: GCTGGAAACGACCGCCACCCACCACCAGGACAGCTG...GACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp CTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAAGCACAGCTGTCCTGGTGGTaGGTGGCGGTCGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSWWWVAVVSSLYAAEKAQLSWW*VAVVSS
Trigger: GCTGGAAACGACCGCCACCCACCACCAGGACAGCTG...TGCTTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCACATGCCTCTGGGATaGGCCTGGAGAGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: CCSSERLACQGAGLGRGVHMPLG*AWRVPQ
Trigger: CTGTGGGACTCTCCAGGCCCATCCCAGAGGCATGTG...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR CCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCCCTTGGGGTCAGTTCTaGACATCCCCAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVPWGQF*TSPSSC
Trigger: GCAGGAGCTTGGGGATGTCCAGAACTGACCCCAAGG...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR CCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGATGGGGAAACTGGGGCTaGGTGCCTTGTCTAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARWGNWG*VPCLRS
Trigger: GGACCTTAGACAAGGCACCCAGCCCCAGTTTCCCCA...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676678.1
CDS-3UTR CCA 90 bp GCCAGTGGGCCAGGCGTGCCACCCAGAACCCAGCCAGCTAGGGGCCCCGCCCTTGTTATTTCTGCATGGTaGTCGCACATTCGCTTTATC +
Preference number: 4 (lower is better)
Translates to: ASGPGVPPRTQPARGPALVISAW*SHIRFI
Trigger: GATAAAGCGAATGTGCGACCACCATGCAGAAATAAC...AAGGGCGGGGCCCCTAGCTGGCTGGGTTCTGGGTGGCACGCCTGGCCCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR CCA 90 bp TCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCCAACAGTGTACCTCGTaGGGCACAGTGATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SGTSGWLLPCVGPLRVWGQQCTS*GTVMAS
Trigger: ACTTGCCATCACTGTGCCCCACGAGGTACACTGTTG...GCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR CCA 90 bp TCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGACTCACCACTCCCCTTaGGAACAGCAACGTGGCATG +
Preference number: 4 (lower is better)
Translates to: SGRRPRPRCALHLGHSPETHHSP*EQQRGM
Trigger: CATGCCACGTTGCTGTTCCCAAGGGGAGTGGTGAGT...CTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR CCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCCTGTTGTCTCCCAGCTaGCTTAGAGGACACCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVLLSPS*LRGHPG
Trigger: CCCTGGGTGTCCTCTAAGCCAGCTGGGAGACAACAG...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678255.1
3UTR CAA 72 bp TGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCACGTaGTCAGCCAGTAGCACTGTCCCCTTCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CARKSGAPGQIT*SASSTVPFRSR
Trigger: CCTGCTGCGGAAGGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
3UTR CAA 72 bp CTGGTCTCGGTGCAGGTGAACTCAGCTAGCACAGGGTaGATTCCTGTCCTGGGCCTGGGAACTGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LVSVQVNSASTG*IPVLGLGTGPL
Trigger: CAAGGGCCCAGTTCCCAGGCCCAGGACAGGAATCAACCCTGTGCTAGCTGAGTTCACCTGCACCGAGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCTCTTCAAAGCACCTCTaGGCAGGCTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RKSGAPGQITLSASSTVPSSKHL*AGSSPL
Trigger: CAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGA...GGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000207636.9
ENST00000428707.2
CDS-3UTR TCA 90 bp ACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTGTTCTTCAAAGCACCTCTaGGCAGGCTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TPSPWSCAVSALVSGLGCSSKHL*AGSSPL
Trigger: CAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGA...ACACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR TCA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGTCTTCAAAGCACCTCTaGGCAGGCTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: CCSSERLACQGAGLGRGVSSKHL*AGSSPL
Trigger: CAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGA...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000428707.2
ENST00000676678.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GCAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAATCTTCAAAGCACCTCTaGGCAGGCTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAVLVVGGGRFQPVCCRESSKHL*AGSSPL
Trigger: CAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGA...TTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR TCA 90 bp CGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGATCTTCAAAGCACCTCTaGGCAGGCTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRRSAGARLAPSVPGWVRSSKHL*AGSSPL
Trigger: CAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGA...TCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000428707.2
ENST00000676678.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp ACCCCATCTCCTTGGTCCTGTGCCGTTTCTGCCCTGGTGTCTGGTCTGGGGTGTCCTTGGTGTCACCCATaGGCAGGTTGTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: TPSPWSCAVSALVSGLGCPWCHP*AGCGWA
Trigger: AGCCCATCCACAACCTGCTCATGGGTGACACCAAGG...ACACCCCAGACCAGACACCAGGGCAGAAACGGCACAGGACCAAGGAGATGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR TCA 90 bp TTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTCCTTGGTGTCACCCATaGGCAGGTTGTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: LQFREVSMSGRRPRPRCAPWCHP*AGCGWA
Trigger: AGCCCATCCACAACCTGCTCATGGGTGACACCAAGG...AGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGAGGGCTGGTGCTCCTaGATCACGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: REVSMSGRRPRPRCALHLEGWCS*ITASTI
Trigger: GATCGTGGACGCCGTGATTCAGGAGCACCAGCCCTC...TAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CSSERLACQGAGLGRGVLSSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...AAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGTCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALSSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGGTGTGAATGCTGGCTaGCTCCTCTTCGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSRSTSGTFSTRLGERARGVNAG*LLFVSQ
Trigger: CTGGGAAACGAAGAGGAGTCAGCCAGCATTCACACC...TCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTAATGCGGGAGCTGGTCTaGGCCATTGCCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: DTARSRRRSAGARLAPSVMRELV*AIASSV
Trigger: TACAGAAGAGGCAATGGCTCAGACCAGCTCCCGCAT...TACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTTGGTCTCGGTGCAGGTaGACTCAGCTAGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: FRTQPGAAEGQQEHVWHLWSRCR*TQLAQG
Trigger: ACCCTGTGCTAGCTGAGTTCACCTGCACCGAGACCA...AAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGGAAATCCTCCTGGTGTaGCCCTCCAGGCAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: EVCFAFRTQPGAAEGQQEEILLV*PSRQVA
Trigger: GGCTACCTGCCTGGAGGGTCACACCAGGAGGATTTC...CTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407537.5
ENST00000678255.1
CDS-3UTR TCA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGTCTCGTGGGGCACAGTaGTGGCAAGTGACCCCACTT +
Preference number: 4 (lower is better)
Translates to: CCSSERLACQGAGLGRGVSRGAQ*WQVTPL
Trigger: AAGTGGGGTCACTTGCCATCACTGTGCCCCACGAGA...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407537.5
CDS-3UTR TCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGAAGACGTCAGCGGACTaGAAGACACCAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKKTSAD*KTPDHC
Trigger: GCAGTGGTCTGGTGTCTTTCAGTCCGCTGACGTCTT...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR TCA 90 bp GTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACCCTCGTGGGGCACAGTaGTGGCAAGTGACCCCACTT +
Preference number: 4 (lower is better)
Translates to: VSMSGRRPRPRCALHLGHPRGAQ*WQVTPL
Trigger: AAGTGGGGTCACTTGCCATCACTGTGCCCCACGAGG...GTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR GCA 90 bp CACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCCCTTCCGCAGCAGGCTGGTTCAGGATGCGCTaGTCCTTGGTGTCACCCATG +
Preference number: 4 (lower is better)
Translates to: HLGRSRCQPVALSPSAAGWFRMR*SLVSPM
Trigger: CATGGGTGACACCAAGGAGCAGCGCATCCTGAACCA...GCCTGCTGCGGAAGGGGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTGGTTCAGGATGCGCTaGTCCTTGGTGTCACCCATG +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTWFRMR*SLVSPM
Trigger: CATGGGTGACACCAAGGAGCAGCGCATCCTGAACCA...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCTGGTTCAGGATGCGCTaGTCCTTGGTGTCACCCATG +
Preference number: 4 (lower is better)
Translates to: LGHSPEPQKVSRSTSGTFWFRMR*SLVSPM
Trigger: CATGGGTGACACCAAGGAGCAGCGCATCCTGAACCA...GAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: AEVCFAFRTQPGAAEGQQARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...CTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCALHLGHSARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...GCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: PRCALHLGHSPEPQKVSRARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...CCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TCTGCCACTCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCACGTGGTTCAGGATaGGCTGCTCCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SATQVWHKWLASPLCRASARGSG*AAPWCH
Trigger: GTGACACCAAGGAGCAGCGCATCCTGAACCACGTGC...AGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTACCGGGCTCCGCATGCTaGAGCACGTGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: REVSMSGRRPRPRCALHLPGSAC*STWFRM
Trigger: CATCCTGAACCACGTGCTGCAGCATGCGGAGCCCGG...TAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp TTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: FRTQPGAAEGQQEHVWHLCTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...AAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCCTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCALHLGHSCTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...GCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CGCACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RTCARKSGAPGQITLSASCTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...ACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp TTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTGCACTCAAAGCAGCTaGTCCCGCGCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LQFREVSMSGRRPRPRCACTQSS*SRARVL
Trigger: TAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA...AGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGCCTCGGCCGAGGTGTaGTTTGCATTTAGGACACAG +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKASAEV*FAFRTQ
Trigger: CTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGCCTCGGCCGAGGTGTaGTTTGCATTTAGGACACAG +
Preference number: 4 (lower is better)
Translates to: EPQKVSRSTSGTFSTRLGASAEV*FAFRTQ
Trigger: CTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC...ACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp GCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACGGCAGAAACCAGCACTaGATCCTCACTCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: AFRTQPGAAEGQQEHVWHGRNQH*ILTHGP
Trigger: TGGCCCATGAGTGAGGATGCAGTGCTGGTTTCTGCC...GTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCGGCAGAAACCAGCACTaGATCCTCACTCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVGRNQH*ILTHGP
Trigger: TGGCCCATGAGTGAGGATGCAGTGCTGGTTTCTGCC...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR GCA 90 bp AGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCGACAGAGCAGGTGTGTaGCTCTGGCAGTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SSERLACQGAGLGRGVLCDRAGV*LWQSCV
Trigger: CACACAGGACTGCCAGAGGCACACACCTGCTCTGTC...GCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp TTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGGCCTTGTGCCTCAGTTaGCTGACGTGTCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: FAFRTQPGAAEGQQEHVWALCLS*LTCQRQ
Trigger: CTGGCGCTGACACGTCAGGCAACTGAGGCACAAGGC...CCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp GAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTTCGCCCCCTTGTGTTTaGAGAGGGGCAAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: EPQKVSRSTSGTFSTRLGSPPCV*RGARFR
Trigger: TCTGAACCTTGCCCCTCTGCAAACACAAGGGGGCGA...ACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp GAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGACCCACACGCCCCTTTaGTTGGAGTGCCACCATCGC +
Preference number: 4 (lower is better)
Translates to: EVCFAFRTQPGAAEGQQETHTPL*LECHHR
Trigger: GCGATGGTGGCACTCCAAGCAAAGGGGCGTGTGGGT...CTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR GCA 90 bp CAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGAAGACACCAGACCACTaGACCTCCAAGAGAAGCGTG +
Preference number: 4 (lower is better)
Translates to: QPGAAEGQQEHVWHLQYQKTPDH*TSKRSV
Trigger: CACGCTTCTCTTGGAGGTGCAGTGGTCTGGTGTCTT...CTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp GTGTGCACTCAAAGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCACCGTTTCCAGCCTGTATaGTGCAGAGAAAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VCTQSSCSRARVLGSLAHRFQPV*CRESRG
Trigger: CCCCCTGCTTTCTCTGCAGCATACAGGCTGGAAACG...GTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR GCA 90 bp AGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGTCCCATCAACAAGCCTaGCCCTTGGGGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RPRPRCALHLGHSPEPQKSHQQA*PLGSVL
Trigger: CAGAACTGACCCCAAGGGGCAGGCTTGTTGATGGGA...CTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR GCA 90 bp TTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCGCCCAGCGTGACTCCTaGAGGAAAGGACTGTACAAG +
Preference number: 4 (lower is better)
Translates to: LGHSPEPQKVSRSTSGTFAQRDS*RKGLYK
Trigger: CTTGTACAGTCCTTTCCTGCAGGAGTCACGCTGGGC...GAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR GCA 90 bp TCTGCCACTCAGGTCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTTGCTTGGAGGCCCCCTaGAGGTCAACCTGCTCATGT +
Preference number: 4 (lower is better)
Translates to: SATQVWHKWLASPLCRASCLEAP*RSTCSC
Trigger: ACATGAGCAGGTTGACCTGCAGGGGGCCTCCAAGCA...AGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGACCTGAGTGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR GCA 90 bp AGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGTCACATCCGATTCTaGCTTGGCACCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SRSTSGTFSTRLGERAREGHIRF*LGTCLE
Trigger: CTCCAAGCAGGTGCCAAGGCAGAATCGGATGTGACC...CTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR GCA 90 bp TGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTGGAGAGGCTGTATGGTaGAGCCCCTTGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: CSSERLACQGAGLGRGVLGEAVW*SPLASC
Trigger: ACATGAGGCCAAGGGGCTGCACCATACAGCCTCTCC...AAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678255.1
CDS-3UTR CCA 90 bp AGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGCCCATGAGCAGGTTGTaGATGGGCTGCAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: SRSTSGTFSTRLGERAREPMSRL*MGCRMN
Trigger: GTTCATCCTGCAGCCCATCCACAACCTGCTCATGGG...CTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCCCCATGAGCAGGTTGTaGATGGGCTGCAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVPMSRL*MGCRMN
Trigger: GTTCATCCTGCAGCCCATCCACAACCTGCTCATGGG...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SERLACQGAGLGRGVLCIACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...AATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CTAGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCACTGTCCGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGSLAHLGRSRCQPVALSACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...GGACAGTGCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp ATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGCATGCTGCAGCACGTaGTTCAGGATGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IQCCSSERLACQGAGLGRACCST*FRMRCS
Trigger: GGAGCAGCGCATCCTGAACCACGTGCTGCAGCATGC...TCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGCGCAGTAGGTGTCAATaGCCTCCAGCACGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRCALHLGHSPEPQKVSRRSRCQ*PPARSV
Trigger: CACAGAGCGTGCTGGAGGCCATTGACACCTACTGCG...CCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTCGCAGTAGGTGTCAATaGCCTCCAGCACGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LQFREVSMSGRRPRPRCARSRCQ*PPARSV
Trigger: CACAGAGCGTGCTGGAGGCCATTGACACCTACTGCG...AGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RCALHLGHSPEPQKVSRSCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...GCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTGTCGCCCACGTTCATaGCCCACTCCTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: CALHLGHSPEPQKVSRSTCRPRS*PTPSAR
Trigger: GCGAGCAGAAGGAGTGGGCCATGAACGTGGGCGACA...CGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAAAATCCACCATCCGCTaGGTGATGGCGGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: RRRSAGARLAPSVPGWVRKSTIR*VMAAQS
Trigger: CGACTGTGCCGCCATCACCCAGCGGATGGTGGATTT...TCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCAGGCCACATTCCTCCAAGAGAAGCGTGTCCGGCAGGTACCGGTCCTTCCAGTTGGGGGATGATGTCCTaGGACGCTCCAACCACAAGG +
Preference number: 4 (lower is better)
Translates to: AGHIPPREACPAGTGPSSWGMMS*DAPTTR
Trigger: CCTTGTGGTTGGAGCGTCCCAGGACATCATCCCCCA...ACTGGAAGGACCGGTACCTGCCGGACACGCTTCTCTTGGAGGAATGTGGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000207636.9
CDS-3UTR CCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGTGGGGGATGATGTCCTaGGACGCTCCAACCACAAGG +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALWGMMS*DAPTTR
Trigger: CCTTGTGGTTGGAGCGTCCCAGGACATCATCCCCCA...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCTGGGGGATGATGTCCTaGGACGCTCCAACCACAAGG +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCALHLGHSWGMMS*DAPTTR
Trigger: CCTTGTGGTTGGAGCGTCCCAGGACATCATCCCCCA...GCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTTACCGGTCCTTCCAGTaGTCGAGGAAGACCATGTCC +
Preference number: 4 (lower is better)
Translates to: ASAEVCFAFRTQPGAAEGYRSFQ*SRKTMS
Trigger: GGACATGGTCTTCCTCGACCACTGGAAGGACCGGTA...ACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCTACCGGTCCTTCCAGTaGTCGAGGAAGACCATGTCC +
Preference number: 4 (lower is better)
Translates to: PRPRCALHLGHSPEPQKVYRSFQ*SRKTMS
Trigger: GGACATGGTCTTCCTCGACCACTGGAAGGACCGGTA...GACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGCACTCAAAGCAGCTGCTCCCGCGCACGTGTGCTAGGAAGTCTGGCGCACCTGTACCGGTCCTTCCAGTaGTCGAGGAAGACCATGTCC +
Preference number: 4 (lower is better)
Translates to: CTQSSCSRARVLGSLAHLYRSFQ*SRKTMS
Trigger: GGACATGGTCTTCCTCGACCACTGGAAGGACCGGTA...CAGGTGCGCCAGACTTCCTAGCACACGTGCGCGGGAGCAGCTGCTTTGAGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp GTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGAAGTCTGGCGCACCTaGGCAGATCACGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VLQFREVSMSGRRPRPRCEVWRT*ADHVVS
Trigger: GCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTC...ACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp CAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGGAAGTCTGGCGCACCTaGGCAGATCACGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QFREVSMSGRRPRPRCALEVWRT*ADHVVS
Trigger: GCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTC...CAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCGAAGTCTGGCGCACCTaGGCAGATCACGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KVSRSTSGTFSTRLGERAEVWRT*ADHVVS
Trigger: GCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTC...GGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp ACGTGTGCTAGGAAGTCTGGCGCACCTGGGCAGATCACGTTGTCAGCCAGTAGCCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: TCARKSGAPGQITLSASSPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...GCTACTGGCTGACAACGTGATCTGCCCAGGTGCGCCAGACTTCCTAGCACACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp TGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: CFAFRTQPGAAEGQQEHVPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...GACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: NPVLQFREVSMSGRRPRPPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...CGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTCCCTGCTTCGCTGCCTaGGCCCTTGTAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSPCFAA*ALVDGL
Trigger: AAGGCCATCTACAAGGGCCCAGGCAGCGAAGCAGGG...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTCCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: SERLACQGAGLGRGVLCIPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...AATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCCCTTCAGTACCAGGCTaGGTGAGAGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: RCALHLGHSPEPQKVSRSPSVPG*VREPER
Trigger: CCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGG...GCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGCAGGAGCACGTCTaGCACCTTCAGTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: SAEVCFAFRTQPGAAEGQQQEHV*HLQYQA
Trigger: AGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTG...CTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp ATGGGGCAGTGTGTCACTGATGTGAGGCTCCTTAAGCATCAGTCTGTGAAGGGCCGACGATGGCGGCAATaGCGGTGGCGCTGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: MGQCVTDVRLLKHQSVKGRRWRQ*RWRCGD
Trigger: ATCCCCGCAGCGCCACCGCCATTGCCGCCATCGTCG...GCCCTTCACAGACTGATGCTTAAGGAGCCTCACATCAGTGACACACTGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp CATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCGTAAGCAAGGCCCAGTaGGGAGTAGGGAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: HLGHSPEPQKVSRSTSGTVSKAQ*GVGKEM
Trigger: CATCTCCTTCCCTACTCCCCACTGGGCCTTGCTTAC...GGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCAGGGATGCGGGAGCTaGTCTGAGCCATTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SMSGRRPRPRCALHLGHSQGCGS*SEPLPL
Trigger: AAGAGGCAATGGCTCAGACCAGCTCCCGCATCCCTG...GCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp TGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGAGCAGTCTGACCCCTTaGAGGAGATGGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: CCSSERLACQGAGLGRGVSSLTP*RRWGQL
Trigger: GAGCTGTCCCCATCTCCTCCAAGGGGTCAGACTGCT...CACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTCCAGGAGTAGAATCTTaGCTAGGGGCTGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: EPQKVSRSTSGTFSTRLGPGVES*LGAGLG
Trigger: ACCGAGACCAGCCCCTAGCCAAGATTCTACTCCTGG...ACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp AGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGGTGAGAGAGCCCGAGAGGGGTTTCTGGTCCCTGGGTaGCCCCAAACTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: RSTSGTFSTRLGERAREGFLVPG*PQTCPL
Trigger: AAGTGGACAAGTTTGGGGCCACCCAGGGACCAGAAA...CCCCTCTCGGGCTCTCTCACCCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACTCTGTTTCTGGTCCCTaGGTGGCCCCAAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: AFRTQPGAAEGQQEHVWHSVSGP*VAPNLS
Trigger: GGACAAGTTTGGGGCCACCCAGGGACCAGAAACAGA...GTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGCAGAGGCTCTGTTTCTaGTCCCTGGGTGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: AEVCFAFRTQPGAAEGQQQRLCF*SLGGPK
Trigger: TTTGGGGCCACCCAGGGACCAGAAACAGAGCCTCTG...CTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR CCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGCAGGTGTGTGCCTCTaGCAGTCCTGTGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSAGVCL*QSCVEP
Trigger: AGGCTCCACACAGGACTGCCAGAGGCACACACCTGC...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR CCA 90 bp GCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTCCTTCTCGTGCCCTCTaGTGCCCTCGGGTAGACAGA +
Preference number: 4 (lower is better)
Translates to: ALHLGHSPEPQKVSRSTSPSRAL*CPRVDR
Trigger: TCTGTCTACCCGAGGGCACCAGAGGGCACGAGAAGG...AGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403710.5
ENST00000678255.1
CDS-3UTR CCA 90 bp GGTGGGTGTCCCAAGCCCAGTGGAGGATCACAGAGCCACTCAGTGTCGCTGACCGGATGCCATCCTGGTTaGGGCTCACCTCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GGCPKPSGGSQSHSVSLTGCHPG*GSPPRE
Trigger: TTCTCTTGGAGGTGAGCCCCAACCAGGATGGCATCC...GGTCAGCGACACTGAGTGGCTCTGTGATCCTCCACTGGGCTTGGGACACCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403184.5
CDS-3UTR CCA 90 bp TGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTTGCAGCTGTCCTGGTaGTGGGTGGCGGTCGTTTCC +
Preference number: 4 (lower is better)
Translates to: CFAFRTQPGAAEGQQEHVLQLSW*WVAVVS
Trigger: GGAAACGACCGCCACCCACCACCAGGACAGCTGCAA...GACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428707.2
ENST00000677397.1
CDS-3UTR CCA 90 bp GAGAGGCACCCAAGGAGAGGGGTTGCTGGTATGGTCCCTGGAGACAATATTGGCCCTCTGGGATGGGCCTaGAGAGTCCCACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ERHPRRGVAGMVPGDNIGPLGWA*RVPQGL
Trigger: CAAGCCCTGTGGGACTCTCCAGGCCCATCCCAGAGG...GCCAATATTGTCTCCAGGGACCATACCAGCAACCCCTCTCCTTGGGTGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR CCA 90 bp CAGCTGTCCTGGTGGTGGGTGGCGGTCGTTTCCAGCCTGTATGCTGCAGAGAAACCTGTGCCTAGCCCCTaGGGCCAGGTTTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: QLSWWWVAVVSSLYAAEKPVPSP*GQVSTF
Trigger: GAAAGTGGAAACCTGGCCCCAGGGGCTAGGCACAGG...TTTCTCTGCAGCATACAGGCTGGAAACGACCGCCACCCACCACCAGGACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428707.2
CDS-3UTR CCA 90 bp TCTGGCACAAGTGGCTGGCTTCTCCCTTGTGTCGGGCCTCTGCGCGTCTGGGGCTCAAGGGTGTTCTCCTaGTCACATCCGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGTSGWLLPCVGPLRVWGSRVFS*SHPILP
Trigger: AGGCAGAATCGGATGTGACCAGGAGAACACCCTTGA...GCCCCAGACGCGCAGAGGCCCGACACAAGGGAGAAGCCAGCCACTTGTGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678255.1
3UTR CAA 72 bp CAGGCCGTCCACCACCTCCCTGTATTCCAGGAACGATaGGTAGTGTGTGCACTCAAAGCAGCTGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: QAVHHLPVFQER*VVCALKAAAPA
Trigger: CGCGGGAGCAGCTGCTTTGAGTGCACACACTACCAATCGTTCCTGGAATACAGGGAGGTGGTGGACGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000207636.9
ENST00000428707.2
ENST00000677397.1
CDS-3UTR TCA 90 bp TCACGTTGTCAGCCAGTAGCACTGTCCCCTTCCGCAGCAGGCCACATTCCTCTGCCTTGGTGTCACCCATaGGCAGGTTGTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: SRCQPVALSPSAAGHIPLPWCHP*AGCGWA
Trigger: AGCCCATCCACAACCTGCTCATGGGTGACACCAAGG...CAGAGGAATGTGGCCTGCTGCGGAAGGGGACAGTGCTACTGGCTGACAACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677397.1
CDS-3UTR TCA 90 bp AAAAAGAACAATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGGAGCCTCGCCCCTGGTaGCAGCAGGCGGGCCATGCG +
Preference number: 4 (lower is better)
Translates to: KKNNPVLQFREVSMSGRREPRPW*QQAGHA
Trigger: CGCATGGCCCGCCTGCTGTCACCAGGGGCGAGGCTC...CCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGATTGTTCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp ATCCAGTGTTGCAGTTCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGATCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: IQCCSSERLACQGAGLGRSSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...TCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGAACTGCAACACTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp TCAGAGAGGTTAGCATGTCAGGGCGCAGGCCTCGGCCGAGGTGTGCTTTGCATTTCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SERLACQGAGLGRGVLCISSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...AATGCAAAGCACACCTCGGCCGAGGCCTGCGCCCTGACATGCTAACCTCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp AGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCTCTTCAGCTGGGGGATaGTGTCCTGGGACGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RCALHLGHSPEPQKVSRSSSAGG*CPGTLQ
Trigger: TTGGAGCGTCCCAGGACATCATCCCCCAGCTGAAGA...GCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000207636.9
ENST00000361682.11
ENST00000403710.5
ENST00000406520.7
ENST00000407537.5
ENST00000428707.2
ENST00000449653.5
ENST00000676678.1
ENST00000677397.1
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GACACAGCCCGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACGTCAAGGGGAGCTTTaGATGTTTGGTGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: DTARSRRRSAGARLAPSVRQGEL*MFGAQV
Trigger: GACTTGGGCACCAAACATTCAAAGCTCCCCTTGACG...TACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GCCTCGGCCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCGTCAAGGGGAGCTTTaGATGTTTGGTGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: ASAEVCFAFRTQPGAAEGRQGEL*MFGAQV
Trigger: GACTTGGGCACCAAACATTCAAAGCTCCCCTTGACG...ACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGGCCGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CGGAGCCGCAGAAGGTCAGCAGGAGCACGTCTGGCACCTTCAGTACCAGGCTGGTTGGTCAGAAAGGTGTaGATGCTGGCTGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: RSRRRSAGARLAPSVPGWLVRKV*MLADSS
Trigger: AGAGGAGTCAGCCAGCATTCACACCTTTCTGACCAA...CCAGCCTGGTACTGAAGGTGCCAGACGTGCTCCTGCTGACCTTCTGCGGCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp CCGAGGTGTGCTTTGCATTTAGGACACAGCCCGGAGCCGCAGAAGGTCAGCAGGATGCGGGAGCTGGTCTaGGCCATTGCCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PRCALHLGHSPEPQKVSRMRELV*AIASSV
Trigger: TACAGAAGAGGCAATGGCTCAGACCAGCTCCCGCAT...CCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAAGCACACCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1
ENST00000678868.1
CDS-3UTR TCA 90 bp GGTCTGAGCCATTGCCTCTTCTGTAAGCAAGGCCCAGTGGGGAGTAGGGAAGGAAGGTGGCTAGCAGTCTaGCCCCTTGGAGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: GLSHCLFCKQGPVGSREGRWLAV*PLGGDG
Trigger: CCCATCTCCTCCAAGGGGTCAGACTGCTAGCCACCT...TCCTTCCCTACTCCCCACTGGGCCTTGCTTACAGAAGAGGCAATGGCTCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361682.11
ENST00000678255.1
ENST00000678769.1