RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COMP (Homo sapiens)

Ensembl gene IDs: ENSG00000105664

Ensembl transcript IDs: ENST00000222271.7, ENST00000425807.1, ENST00000542601.6, ENST00000612179.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCCCATCCAGCCGCGGTaGGGGTGGCTGTCATCCGGC +
Preference number: 2 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPPIQPR*GWLSSG
Trigger: GCCGGATGACAGCCACCCTCACCGCGGCTGGATGGG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCGGGGACCATGGCGGTaGCGGGGAGCTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPARGPWR*RGAGWL
Trigger: CAGCCACCCAGCTCCCCGCCACCGCCATGGTCCCCG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCGGTGTCGGGGACCATaGCGGTGGCGGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPARCRGP*RWRGAG
Trigger: CCCAGCTCCCCGCCACCGCCATGGTCCCCGACACCG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGAGCCCAACGGGCTCTaGCCCTGTCCGGACGCGCCG +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAEPNGL*PCPDAP
Trigger: CGGCGCGTCCGGACAGGGCCAGAGCCCGTTGGGCTC...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000425807.1
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGCGCCGCTCTCCGTCTaGATGCAGGCCACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAAPLSV*MQATPG
Trigger: CCCCGGCGTGGCCTGCATCCAGACGGAGAGCGGCGC...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGTGGCAGCCGGACGCCTaGTCGCCCACGAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAWQPDA*SPTKPG
Trigger: GCCCGGCTTCGTGGGCGACCAGGCGTCCGGCTGCCA...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGCTGCGGGCCCAGGTCTaGGCCTGCGGCGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPLRAQV*ACGGRG
Trigger: TCCCCTGCCGCCGCAGGCTCAGACCTGGGCCCGCAG...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR CCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGAGCCCAACGGGCTCTaGCCCTGTCCGGACGCGCCG +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGEPNGL*PCPDAP
Trigger: CGGCGCGTCCGGACAGGGCCAGAGCCCGTTGGGCTC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000425807.1
CDS-3UTR CCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACAAGCCGGGCGCGCAGTaGAGCAGGGGCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHKPGAQ*SRGRTL
Trigger: CAGCGTGCGGCCCCTGCTCCACTGCGCGCCCGGCTT...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGAAGCCGGGCGCGCAGTaGAGCAGGGGCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLKPGAQ*SRGRTL
Trigger: CAGCGTGCGGCCCCTGCTCCACTGCGCGCCCGGCTT...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTAAGCCGGGCGCGCAGTaGAGCAGGGGCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGKPGAQ*SRGRTL
Trigger: CAGCGTGCGGCCCCTGCTCCACTGCGCGCCCGGCTT...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCGCGCCGCTCTCCGTCTaGATGCAGGCCACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVAPLSV*MQATPG
Trigger: CCCCGGCGTGGCCTGCATCCAGACGGAGAGCGGCGC...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGCGCCGCTCTCCGTCTaGATGCAGGCCACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLAPLSV*MQATPG
Trigger: CCCCGGCGTGGCCTGCATCCAGACGGAGAGCGGCGC...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACTGGCAGCCGGACGCCTaGTCGCCCACGAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHWQPDA*SPTKPG
Trigger: GCCCGGCTTCGTGGGCGACCAGGCGTCCGGCTGCCA...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTTGGCAGCCGGACGCCTaGTCGCCCACGAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPWQPDA*SPTKPG
Trigger: GCCCGGCTTCGTGGGCGACCAGGCGTCCGGCTGCCA...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCCCATCCAGCCGCGGTaGGGGTGGCTGTCATCCGGC +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPPIQPR*GWLSSG
Trigger: GCCGGATGACAGCCACCCTCACCGCGGCTGGATGGG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCCCATCCAGCCGCGGTaGGGGTGGCTGTCATCCGGC +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTPIQPR*GWLSSG
Trigger: GCCGGATGACAGCCACCCTCACCGCGGCTGGATGGG...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCGGGGACCATGGCGGTaGCGGGGAGCTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHRGPWR*RGAGWL
Trigger: CAGCCACCCAGCTCCCCGCCACCGCCATGGTCCCCG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCGGTGTCGGGGACCATaGCGGTGGCGGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHRCRGP*RWRGAG
Trigger: CCCAGCTCCCCGCCACCGCCATGGTCCCCGACACCG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCGCAGGGGCCGCACGCTaGGTAGGCCGGTGCGTACTG +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVAGAAR*VGRCVL
Trigger: CAGTACGCACCGGCCTACCCAGCGTGCGGCCCCTGC...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCGCAGGGGCCGCACGCTaGGTAGGCCGGTGCGTACTG +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVAGAAR*VGRCVL
Trigger: CAGTACGCACCGGCCTACCCAGCGTGCGGCCCCTGC...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGAGCCCCACGCCCTGGTaGGTGGGGCCGCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPSPTPW*VGPLYP
Trigger: GGGGTACAGCGGCCCCACCCACCAGGGCGTGGGGCT...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATAGCCCCACGCCCTGGTaGGTGGGGCCGCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHSPTPW*VGPLYP
Trigger: GGGGTACAGCGGCCCCACCCACCAGGGCGTGGGGCT...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCCCACGAAGCCGGGCTaGCACGGGCCGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLPTKPG*HGPHWK
Trigger: CTTCCAGTGCGGCCCGTGCCAGCCCGGCTTCGTGGG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGCTCGTGGCACTCGCTaGGCGAGCCGTCGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGARGTR*ASRRGR
Trigger: TCTGCCCCGACGGCTCGCCCAGCGAGTGCCACGAGC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGGCAGTTGTCGGCCTaGTTGCGGATCCGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAGQLSA*LRIRSP
Trigger: CGGCGACCGGATCCGCAACCAGGCCGACAACTGCCC...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCTGTCCGCGTCCTCCTaGCCGGGGTTAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPALSASS*PGLGTR
Trigger: CCTGGTGCCTAACCCCGGCCAGGAGGACGCGGACAG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGCGGGTCCTCACCCTaGTCCCTAGGCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAGGSSP*SLGLPQ
Trigger: CTGCGGCAAGCCTAGGGACCAGGGTGAGGACCCGCC...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCAGGACGGCCACCCCTTaGGGCTGGGTGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVRTATP*GWVQSP
Trigger: GGGGCTCTGCACCCAGCCCCAAGGGGTGGCCGTCCT...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCGAGGGCAGCCAGGGTaGGCAGAAGAACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHRGQPG*AEERRR
Trigger: CCGCCTGCGTTCTTCTGCTCACCCTGGCTGCCCTCG...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCGAGGGCAGCCAGGGTaGGCAGAAGAACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVRGQPG*AEERRR
Trigger: CCGCCTGCGTTCTTCTGCTCACCCTGGCTGCCCTCG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCGAGGGCAGCCAGGGTaGGCAGAAGAACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLRGQPG*AEERRR
Trigger: CCGCCTGCGTTCTTCTGCTCACCCTGGCTGCCCTCG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCGCTCTCCGTCTGGATaGAGGCCACGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVRSPSG*RPRRGS
Trigger: GCTTCCCCGGCGTGGCCTGCATCCAGACGGAGAGCG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCGCTCTCCGTCTGGATaGAGGCCACGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPRSPSG*RPRRGS
Trigger: GCTTCCCCGGCGTGGCCTGCATCCAGACGGAGAGCG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCACAGAGGATCCCGTTaGCGGCCCAGCCAACGGCAC +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAHRGSR*RPSQRH
Trigger: GTGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCCGCCACCTGCTTTCTaGGCCCGGCACGTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTPPPAF*ARHVPY
Trigger: GTAGGGGACGTGCCGGGCGCAGAAAGCAGGTGGCGG...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR GCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTCGGTCCCGCCACCTaGTTTCTGCGCCCGGCACGT +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGLGPAT*FLRPAR
Trigger: ACGTGCCGGGCGCAGAAAGCAGGTGGCGGGACCGAG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATGCAGGGGCCGCACGCTaGGTAGGCCGGTGCGTACTG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHAGAAR*VGRCVL
Trigger: CAGTACGCACCGGCCTACCCAGCGTGCGGCCCCTGC...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGTGGCACGGGCCGCACTaGAAGGAGCCCCGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLWHGPH*KEPRVL
Trigger: CAACACCCGGGGCTCCTTCCAGTGCGGCCCGTGCCA...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTTGGCACGGGCCGCACTaGAAGGAGCCCCGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGWHGPH*KEPRVL
Trigger: CAACACCCGGGGCTCCTTCCAGTGCGGCCCGTGCCA...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCCACGAAGCCGGGCTaGCACGGGCCGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHPTKPG*HGPHWK
Trigger: CTTCCAGTGCGGCCCGTGCCAGCCCGGCTTCGTGGG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCTCGTGGCACTCGCTaGGCGAGCCGTCGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPARGTR*ASRRGR
Trigger: TCTGCCCCGACGGCTCGCCCAGCGAGTGCCACGAGC...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCGGGCAGTTGTCGGCCTaGTTGCGGATCCGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTGQLSA*LRIRSP
Trigger: CGGCGACCGGATCCGCAACCAGGCCGACAACTGCCC...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCTGTCCGCGTCCTCCTaGCCGGGGTTAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLLSASS*PGLGTR
Trigger: CCTGGTGCCTAACCCCGGCCAGGAGGACGCGGACAG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCTGTCCGCGTCCTCCTaGCCGGGGTTAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVLSASS*PGLGTR
Trigger: CCTGGTGCCTAACCCCGGCCAGGAGGACGCGGACAG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACGGCGGGTCCTCACCCTaGTCCCTAGGCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHGGSSP*SLGLPQ
Trigger: CTGCGGCAAGCCTAGGGACCAGGGTGAGGACCCGCC...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTTTACCCAACGGGCTCTaGCCCTGTCCGGACGCGCCG +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPLPNGL*PCPDAP
Trigger: CGGCGCGTCCGGACAGGGCCAGAGCCCGTTGGGTAA...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR TCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGACCCCGGGCTGGTGTTaGTACAGCGGACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLTPGWC*YSGLGG
Trigger: TCCCCCGAGTCCGCTGTATCAACACCAGCCCGGGGT...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCAGCTCCCGCACGTCCTaGAGCGCCGCGTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVSSRTS*SAALVS
Trigger: GGAAACCAACGCGGCGCTGCAGGACGTGCGGGAGCT...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCCGGTGCGTACTGACTaGTGCATCCCGCACGCGTCA +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAPVRTD*CIPHAS
Trigger: TGACGCGTGCGGGATGCAGCAGTCAGTACGCACCGG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCACAGAGGATCCCGTTaGCGGCCCAGCCAACGGCAC +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLHRGSR*RPSQRH
Trigger: GTGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCACAGAGGATCCCGTTaGCGGCCCAGCCAACGGCAC +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVHRGSR*RPSQRH
Trigger: GTGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGAGTTGTCGGCCTGGTTaGGGATCCGGTCGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPASCRPG*GSGRRR
Trigger: TCGACGGCGACCGGATCCGCAACCAGGCCGACAACT...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCCTCCGAGGCCCCACTaGGCTCCTCTAGTCTCGGTC +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVPPRPH*APLVSV
Trigger: GACCGAGACTAGAGGAGCGCAGTGGGGCCTCGGAGG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCGGGGGAAGCAGGGGTaGGCGTTGCACTCGTTGACG +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLRGKQG*ALHSLT
Trigger: CGTCAACGAGTGCAACGCCCACCCCTGCTTCCCCCG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTGGCACGGGCCGCACTaGAAGGAGCCCCGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPWHGPH*KEPRVL
Trigger: CAACACCCGGGGCTCCTTCCAGTGCGGCCCGTGCCA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCAGTCTGCATGCTCGTaGCACTCGCTGGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLQSACS*HSLGEP
Trigger: CGGCTCGCCCAGCGAGTGCCACGAGCATGCAGACTG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCAGTCTGCATGCTCGTaGCACTCGCTGGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTQSACS*HSLGEP
Trigger: CGGCTCGCCCAGCGAGTGCCACGAGCATGCAGACTG...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGTTGTCCTTACGGCACTaGCGCTCCGGGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLLSLRH*RSGQRS
Trigger: GCTGCGCTGCCCGGAGCGCCAGTGCCGTAAGGACAA...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTTTGTCCTTACGGCACTaGCGCTCCGGGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPLSLRH*RSGQRS
Trigger: GCTGCGCTGCCCGGAGCGCCAGTGCCGTAAGGACAA...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTTGTCCTTACGGCACTaGCGCTCCGGGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVLSLRH*RSGQRS
Trigger: GCTGCGCTGCCCGGAGCGCCAGTGCCGTAAGGACAA...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCGTGTTGCGCTGGTCTaGGTTCCGCACCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVRVALV*VPHQRA
Trigger: TGCCCGCTGGTGCGGAACCCAGACCAGCGCAACACG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATGGGCAGTTGTCGGCCTaGTTGCGGATCCGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHGQLSA*LRIRSP
Trigger: CGGCGACCGGATCCGCAACCAGGCCGACAACTGCCC...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATGGCGGGTCCTCACCCTaGTCCCTAGGCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHGGSSP*SLGLPQ
Trigger: CTGCGGCAAGCCTAGGGACCAGGGTGAGGACCCGCC...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTGAGCCCCAAACAGCCTaGATCCCGGGCCTCTCACGG +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPEPQTA*IPGLSR
Trigger: CCGTGAGAGGCCCGGGATCCAGGCTGTTTGGGGCTC...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCCTGGTGAGGCGTCATaGGGCCGGGGAATCCCACCA +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPPGEAS*GRGIPP
Trigger: TGGTGGGATTCCCCGGCCCCATGACGCCTCACCAGG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR TCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGGGCGTTGCACTCGTTaGCGTCGGTGCAGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPGRCTR*RRCSAS
Trigger: GCTCGCACTGCACCGACGTCAACGAGTGCAACGCCC...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR TCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATGGGCGTTGCACTCGTTaGCGTCGGTGCAGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHGRCTR*RRCSAS
Trigger: GCTCGCACTGCACCGACGTCAACGAGTGCAACGCCC...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR TCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGACCCCGGGCTGGTGTTaGTACAGCGGACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPTPGWC*YSGLGG
Trigger: TCCCCCGAGTCCGCTGTATCAACACCAGCCCGGGGT...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR TCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCAGGAGCCCCGGGTGTTaGTGCACACGGAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVRSPGC*CTRSWG
Trigger: TCCCCAACTCCGTGTGCATCAACACCCGGGGCTCCT...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCGGTCTCACACTCGTTaGCGTCGGTGCAGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHRSHTR*RRCSAS
Trigger: GCTCGCACTGCACCGACGTCAACGAGTGTGAGACCG...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425807.1
CDS-3UTR GCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATAGCTCCCGCACGTCCTaGAGCGCCGCGTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHSSRTS*SAALVS
Trigger: GGAAACCAACGCGGCGCTGCAGGACGTGCGGGAGCT...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCCGGTGCGTACTGACTaGTGCATCCCGCACGCGTCA +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVPVRTD*CIPHAS
Trigger: TGACGCGTGCGGGATGCAGCAGTCAGTACGCACCGG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCCGGTGCGTACTGACTaGTGCATCCCGCACGCGTCA +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVPVRTD*CIPHAS
Trigger: TGACGCGTGCGGGATGCAGCAGTCAGTACGCACCGG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCGCTGGGTAGGCCGGTaGGTACTGACTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTRWVGR*VLTAAS
Trigger: GGATGCAGCAGTCAGTACGCACCGGCCTACCCAGCG...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTAGGACGCAGTCTGCATaGTCGTGGCACTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPRTQSA*SWHSLG
Trigger: GCCCAGCGAGTGCCACGAGCATGCAGACTGCGTCCT...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCAGGACGCAGTCTGCATaGTCGTGGCACTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTRTQSA*SWHSLG
Trigger: GCCCAGCGAGTGCCACGAGCATGCAGACTGCGTCCT...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCGCAGGCGTCTCCGATaGCATCGCGGTCCACATCCT +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHRRRLR*HRGPHP
Trigger: AGGATGTGGACCGCGATGGCATCGGAGACGCCTGCG...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCGCAGGCGTCTCCGATaGCATCGCGGTCCACATCCT +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGRRRLR*HRGPHP
Trigger: AGGATGTGGACCGCGATGGCATCGGAGACGCCTGCG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGAGTTGTCGGCCTGGTTaGGGATCCGGTCGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLSCRPG*GSGRRR
Trigger: TCGACGGCGACCGGATCCGCAACCAGGCCGACAACT...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCAGTTGTCGGCCTGGTTaGGGATCCGGTCGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTSCRPG*GSGRRR
Trigger: TCGACGGCGACCGGATCCGCAACCAGGCCGACAACT...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCAGTTGGGGTCAATCTaGGCGTCACCCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPQLGSI*ASPSGS
Trigger: GGACCCGGAGGGTGACGCGCAGATTGACCCCAACTG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTACCAACTCCCACCGTTaGAGCGAACCCGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGTNSHR*SEPGPP
Trigger: CGGAGGTCCGGGTTCGCTGCAACGGTGGGAGTTGGT...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCCTGCAGCGCCGCGTTaGTTTCCTGCAGTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAPAAPR*FPAVPE
Trigger: TTCGGGAACTGCAGGAAACCAACGCGGCGCTGCAGG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGCGGGGGAAGCAGGGGTaGGCGTTGCACTCGTTGACG +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPRGKQG*ALHSLT
Trigger: CGTCAACGAGTGCAACGCCCACCCCTGCTTCCCCCG...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCCTGCTTGTTGGCCTTaGCGAAAGCCAGCCCCACGC +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVPACWP*RKPAPR
Trigger: GCGTGGGGCTGGCTTTCGCCAAGGCCAACAAGCAGG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCCTGCTTGTTGGCCTTaGCGAAAGCCAGCCCCACGC +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVPACWP*RKPAPR
Trigger: GCGTGGGGCTGGCTTTCGCCAAGGCCAACAAGCAGG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCGTGTTGCGCTGGTCTaGGTTCCGCACCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHRVALV*VPHQRA
Trigger: TGCCCGCTGGTGCGGAACCCAGACCAGCGCAACACG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCTCGTCCGTGTTGCGCTaGTCTGGGTTCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVSSVLR*SGFRTS
Trigger: GCTGGTGCGGAACCCAGACCAGCGCAACACGGACGA...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGTCGTCCGTGTTGCGCTaGTCTGGGTTCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLSSVLR*SGFRTS
Trigger: GCTGGTGCGGAACCCAGACCAGCGCAACACGGACGA...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTCGCCCCGGCCGTCCTaGTCTGTGTCCTTTTGGTCG +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVSPRPS*SVSFWS
Trigger: CGACCAAAAGGACACAGACCAGGACGGCCGGGGCGA...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGTCACCCTGGCCATCGTaGTCTGAGTCCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPASPWPS*SESSWA
Trigger: TGCCCAGGAGGACTCAGACCACGATGGCCAGGGTGA...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGTCGCAGGCATCACCCTaGCCATCGTGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPASQASP*PSWSES
Trigger: GGACTCAGACCACGATGGCCAGGGTGATGCCTGCGA...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGCATCAAAGTCGTCCTaGCACACGTCGCCCACGCCG +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGASKSS*HTSPTP
Trigger: CGGCGTGGGCGACGTGTGCCAGGACGACTTTGATGC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGGCGGCCACCCCGCATaGTTGTGTCCAAGACCACGT +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGGGHPA*LCPRPR
Trigger: ACGTGGTCTTGGACACAACCATGCGGGGTGGCCGCC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACGGCGGCCACCCCGCATaGTTGTGTCCAAGACCACGT +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHGGHPA*LCPRPR
Trigger: ACGTGGTCTTGGACACAACCATGCGGGGTGGCCGCC...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATAGGAGCCCCGGGTGTTaGTGCACACGGAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHRSPGC*CTRSWG
Trigger: TCCCCAACTCCGTGTGCATCAACACCCGGGGCTCCT...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTGGCCATCGTGGTCTaGGTCCTCCTGGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGLAIVV*VLLGTV
Trigger: AACAGTGCCCAGGAGGACTCAGACCACGATGGCCAG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCTGGCCATCGTGGTCTaGGTCCTCCTGGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPLAIVV*VLLGTV
Trigger: AACAGTGCCCAGGAGGACTCAGACCACGATGGCCAG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCTCTCCCTTCCCTGGTTaGGCACCACCCAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVSPFPG*APPSWG
Trigger: ACCCCAACTGGGTGGTGCTCAACCAGGGAAGGGAGA...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTTCTCCCTTCCCTGGTTaGGCACCACCCAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGSPFPG*APPSWG
Trigger: ACCCCAACTGGGTGGTGCTCAACCAGGGAAGGGAGA...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGCCGCGTTGGTTTCCTaGAGTTCCCGAAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAAALVS*SSRSIC
Trigger: GCAGATGCTTCGGGAACTGCAGGAAACCAACGCGGC...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGCGCTGGGTAGGCCGGTaGGTACTGACTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPRWVGR*VLTAAS
Trigger: GGATGCAGCAGTCAGTACGCACCGGCCTACCCAGCG...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCGCTGGGTAGGCCGGTaGGTACTGACTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHRWVGR*VLTAAS
Trigger: GGATGCAGCAGTCAGTACGCACCGGCCTACCCAGCG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGAGGACGCAGTCTGCATaGTCGTGGCACTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPRTQSA*SWHSLG
Trigger: GCCCAGCGAGTGCCACGAGCATGCAGACTGCGTCCT...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCGGTCCACATCCTCCTaGCCTGAGTTGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPRSTSS*PELGTV
Trigger: GACTGTGCCCAACTCAGGGCAGGAGGATGTGGACCG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCGGTCCACATCCTCCTaGCCTGAGTTGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGRSTSS*PELGTV
Trigger: GACTGTGCCCAACTCAGGGCAGGAGGATGTGGACCG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCGGTCCACATCCTCCTaGCCTGAGTTGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTRSTSS*PELGTV
Trigger: GACTGTGCCCAACTCAGGGCAGGAGGATGTGGACCG...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCTGTCCTCGTCCGTGTTaGGCTGGTCTGGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTCPRPC*AGLGSA
Trigger: TGCGGAACCCAGACCAGCGCAACACGGACGAGGACA...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACTGTCCTCGTCCGTGTTaGGCTGGTCTGGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHCPRPC*AGLGSA
Trigger: TGCGGAACCCAGACCAGCGCAACACGGACGAGGACA...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCCGCCTGATCCGGGTTaGTCTTCTGGGGACAGTTGT +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAPPDPG*SSGDSC
Trigger: ACAACTGTCCCCAGAAGAGCAACCCGGATCAGGCGG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCAGCGCCGCGTTaGTTTCCTGCAGTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHPAAPR*FPAVPE
Trigger: TTCGGGAACTGCAGGAAACCAACGCGGCGCTGCAGG...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTCGTCCGTGTTGCGCTaGTCTGGGTTCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPSSVLR*SGFRTS
Trigger: GCTGGTGCGGAACCCAGACCAGCGCAACACGGACGA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATTCGCCCCGGCCGTCCTaGTCTGTGTCCTTTTGGTCG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHSPRPS*SVSFWS
Trigger: CGACCAAAAGGACACAGACCAGGACGGCCGGGGCGA...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTCGCCCCGGCCGTCCTaGTCTGTGTCCTTTTGGTCG +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPSPRPS*SVSFWS
Trigger: CGACCAAAAGGACACAGACCAGGACGGCCGGGGCGA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGTGGTCTGAGTCCTCCTaGGCACTGTTAGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAWSESS*ALLGTV
Trigger: CACGGTGCCTAACAGTGCCCAGGAGGACTCAGACCA...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACTCGCAGGCATCACCCTaGCCATCGTGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHSQASP*PSWSES
Trigger: GGACTCAGACCACGATGGCCAGGGTGATGCCTGCGA...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATGCATCAAAGTCGTCCTaGCACACGTCGCCCACGCCG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHASKSS*HTSPTP
Trigger: CGGCGTGGGCGACGTGTGCCAGGACGACTTTGATGC...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCACAGCAGCCGCACCTaGGACTCTGTGTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAHSSRT*DSVSPV
Trigger: TACAGGAGACACAGAGTCCCAGGTGCGGCTGCTGTG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACTTGTCCCGAGAGTCCTaGTGTCCGTCTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHLSRES*CPSPSW
Trigger: CCAGGATGGAGACGGACATCAGGACTCTCGGGACAA...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCTTGTCCCGAGAGTCCTaGTGTCCGTCTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTLSRES*CPSPSW
Trigger: CCAGGATGGAGACGGACATCAGGACTCTCGGGACAA...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCTTGTCCCGAGAGTCCTaGTGTCCGTCTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVLSRES*CPSPSW
Trigger: CCAGGATGGAGACGGACATCAGGACTCTCGGGACAA...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCTGGCCATCGTGGTCTaGGTCCTCCTGGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHLAIVV*VLLGTV
Trigger: AACAGTGCCCAGGAGGACTCAGACCACGATGGCCAG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCGAAGTCCACGCCATTaGAGGCAGTGTAACCCACAG +
Preference number: 4 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPARSPRH*RQCNPQ
Trigger: CTGTGGGTTACACTGCCTTCAATGGCGTGGACTTCG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCCTACGAACAGTCCGTaGGCCCCAAACAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLPTNSP*APNSLD
Trigger: ATCCAGGCTGTTTGGGGCTCACGGACTGTTCGTAGG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCGCCGCGTTGGTTTCCTaGAGTTCCCGAAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVAALVS*SSRSIC
Trigger: GCAGATGCTTCGGGAACTGCAGGAAACCAACGCGGC...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCGCCGCGTTGGTTTCCTaGAGTTCCCGAAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTAALVS*SSRSIC
Trigger: GCAGATGCTTCGGGAACTGCAGGAAACCAACGCGGC...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTTGACGTCGGTGCAGTaGGAGCCGTTGCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPLTSVQ*EPLPVK
Trigger: CTTCACGGGCAACGGCTCGCACTGCACCGACGTCAA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATTTGACGTCGGTGCAGTaGGAGCCGTTGCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHLTSVQ*EPLPVK
Trigger: CTTCACGGGCAACGGCTCGCACTGCACCGACGTCAA...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCCGCCTGATCCGGGTTaGTCTTCTGGGGACAGTTGT +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVPPDPG*SSGDSC
Trigger: ACAACTGTCCCCAGAAGAGCAACCCGGATCAGGCGG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTTGTCCAAGACCACGTTaGTGTCGGCCACCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPCPRPR*CRPPAQ
Trigger: CTGAGCTGGTGGCCGACAGCAACGTGGTCTTGGACA...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCTGTCCAAGACCACGTTaGTGTCGGCCACCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTCPRPR*CRPPAQ
Trigger: CTGAGCTGGTGGCCGACAGCAACGTGGTCTTGGACA...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCTGCAGCGCCGCGTTaGTTTCCTGCAGTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHPAAPR*FPAVPE
Trigger: TTCGGGAACTGCAGGAAACCAACGCGGCGCTGCAGG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCCTCCTGCCCTGAGTTaGGCACAGTCACGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPPPALS*AQSRSC
Trigger: ACAACTGCGTGACTGTGCCCAACTCAGGGCAGGAGG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCCTCCTGCCCTGAGTTaGGCACAGTCACGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLPPALS*AQSRSC
Trigger: ACAACTGCGTGACTGTGCCCAACTCAGGGCAGGAGG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACTGGTCGTCGTTCTTCTaGGACCGGCAGTTGTCGCAC +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHWSSFF*DRQLSH
Trigger: GTGCGACAACTGCCGGTCCCAGAAGAACGACGACCA...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCTGGTCTGAGTCCTCCTaGGCACTGTTAGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVWSESS*ALLGTV
Trigger: CACGGTGCCTAACAGTGCCCAGGAGGACTCAGACCA...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTCACCCTGGCCATCGTaGTCTGAGTCCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPSPWPS*SESSWA
Trigger: TGCCCAGGAGGACTCAGACCACGATGGCCAGGGTGA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATTCACCCTGGCCATCGTaGTCTGAGTCCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHSPWPS*SESSWA
Trigger: TGCCCAGGAGGACTCAGACCACGATGGCCAGGGTGA...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTCGCAGGCATCACCCTaGCCATCGTGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPSQASP*PSWSES
Trigger: GGACTCAGACCACGATGGCCAGGGTGATGCCTGCGA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACAGCAGCCGCACCTaGGACTCTGTGTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPHSSRT*DSVSPV
Trigger: TACAGGAGACACAGAGTCCCAGGTGCGGCTGCTGTG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCGGTCTCACACTCGTTaGTGTCCGTGCAAACCTGCT +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGRSHTR*CPCKPA
Trigger: AGCAGGTTTGCACGGACATCAACGAGTGTGAGACCG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR TCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCACTGTCCTTCTGGTCTaGGTTGGGTACCCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVTVLLV*VGYPRA
Trigger: TGCCCTAGGGTACCCAACTCAGACCAGAAGGACAGT...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGACTGTCCTTCTGGTCTaGGTTGGGTACCCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLTVLLV*VGYPRA
Trigger: TGCCCTAGGGTACCCAACTCAGACCAGAAGGACAGT...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTACTGTCCTTCTGGTCTaGGTTGGGTACCCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGTVLLV*VGYPRA
Trigger: TGCCCTAGGGTACCCAACTCAGACCAGAAGGACAGT...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTAAGACTTCACAGCCTTaGGTTGGATGCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGKTSQP*VGCQAR
Trigger: CCGAGCCTGGCATCCAACTCAAGGCTGTGAAGTCTT...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACAAGACTTCACAGCCTTaGGTTGGATGCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHKTSQP*VGCQAR
Trigger: CCGAGCCTGGCATCCAACTCAAGGCTGTGAAGTCTT...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCGGCAGGGGACCTGGTaGGGCGTCATGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPRQGTW*GVMGPG
Trigger: CCCCGGCCCCATGACGCCTCACCAGGTCCCCTGCCG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR GCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGGGACGCAGTTATGTTaGCCGGTCTCACACTCGTTG +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGGTQLC*PVSHSL
Trigger: CAACGAGTGTGAGACCGGGCAACATAACTGCGTCCC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCGGGACGCAGTTATGTTaGCCGGTCTCACACTCGTTG +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVGTQLC*PVSHSL
Trigger: CAACGAGTGTGAGACCGGGCAACATAACTGCGTCCC...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGCCTGATCCGGGTTaGTCTTCTGGGGACAGTTGT +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHPPDPG*SSGDSC
Trigger: ACAACTGTCCCCAGAAGAGCAACCCGGATCAGGCGG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCGGAAGGGGTTCGCCTaGCAATACGTTTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVRKGFA*QYVCSI
Trigger: GATGGAGCAAACGTATTGGCAGGCGAACCCCTTCCG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCGGAAGGGGTTCGCCTaGCAATACGTTTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGRKGFA*QYVCSI
Trigger: GATGGAGCAAACGTATTGGCAGGCGAACCCCTTCCG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCTGGGATGGTGTCATTaGAGCGGTAACGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPLGWCH*SGNAGW
Trigger: CCAACCTGCGTTACCGCTGCAATGACACCATCCCAG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTTGCAAACCTGCTTGTTaGCCTTGGCGAAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGCKPAC*PWRKPA
Trigger: GGCTGGCTTTCGCCAAGGCCAACAAGCAGGTTTGCA...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGCCTCCTGCCCTGAGTTaGGCACAGTCACGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPPPALS*AQSRSC
Trigger: ACAACTGCGTGACTGTGCCCAACTCAGGGCAGGAGG...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTGGTCGTCGTTCTTCTaGGACCGGCAGTTGTCGCAC +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPWSSFF*DRQLSH
Trigger: GTGCGACAACTGCCGGTCCCAGAAGAACGACGACCA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCACGATCTCCCTTCCCTaGTTGAGCACCACCCAGTTG +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTTISLP*LSTTQL
Trigger: CAACTGGGTGGTGCTCAACCAGGGAAGGGAGATCGT...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGTGACCGTGTTCACATaGAACGTGCCCTCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGVTVFT*NVPSKS
Trigger: GGACTTCGAGGGCACGTTCCATGTGAACACGGTCAC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTTCACAGCCTTGAGTTaGATGCCAGGCTCGGCCACA +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVFTALS*MPGSAT
Trigger: TGTGGCCGAGCCTGGCATCCAACTCAAGGCTGTGAA...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACTTCACAGCCTTGAGTTaGATGCCAGGCTCGGCCACA +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHFTALS*MPGSAT
Trigger: TGTGGCCGAGCCTGGCATCCAACTCAAGGCTGTGAA...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCGGTCTCACACTCGTTaGTGTCCGTGCAAACCTGCT +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHRSHTR*CPCKPA
Trigger: AGCAGGTTTGCACGGACATCAACGAGTGTGAGACCG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR TCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCGAAGTCCACGCCATTaGAGGCAGTGTAACCCACAG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHRSPRH*RQCNPQ
Trigger: CTGTGGGTTACACTGCCTTCAATGGCGTGGACTTCG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGAAGACTTCACAGCCTTaGGTTGGATGCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPKTSQP*VGCQAR
Trigger: CCGAGCCTGGCATCCAACTCAAGGCTGTGAAGTCTT...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACTCGCTGTTCATTGTCTaGACGATCTCCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHSLFIV*TISLPW
Trigger: CCAGGGAAGGGAGATCGTGCAGACAATGAACAGCGA...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCTCGCTGTTCATTGTCTaGACGATCTCCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTSLFIV*TISLPW
Trigger: CCAGGGAAGGGAGATCGTGCAGACAATGAACAGCGA...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCTGGGATGGTGTCATTaGAGCGGTAACGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHLGWCH*SGNAGW
Trigger: CCAACCTGCGTTACCGCTGCAATGACACCATCCCAG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCGGTGTCGGGGACCATaGCGGTGGCGGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPRCRGP*RWRGAG
Trigger: CCCAGCTCCCCGCCACCGCCATGGTCCCCGACACCG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTGCAAACCTGCTTGTTaGCCTTGGCGAAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPCKPAC*PWRKPA
Trigger: GGCTGGCTTTCGCCAAGGCCAACAAGCAGGTTTGCA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGACGATCTCCCTTCCCTaGTTGAGCACCACCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPTISLP*LSTTQL
Trigger: CAACTGGGTGGTGCTCAACCAGGGAAGGGAGATCGT...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTCTCCATCCTGGTCTTaGTCGCTGTCACAAGCATCT +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVSPSWS*SLSQAS
Trigger: AGATGCTTGTGACAGCGATCAAGACCAGGATGGAGA...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCTCTCCATCCTGGTCTTaGTCGCTGTCACAAGCATCT +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVSPSWS*SLSQAS
Trigger: AGATGCTTGTGACAGCGATCAAGACCAGGATGGAGA...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTTCTCCATCCTGGTCTTaGTCGCTGTCACAAGCATCT +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGSPSWS*SLSQAS
Trigger: AGATGCTTGTGACAGCGATCAAGACCAGGATGGAGA...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCATGTCCGTGCAAACCTaGTTGTTGGCCTTGGCGAAA +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTMSVQT*LLALAK
Trigger: TTTCGCCAAGGCCAACAAGCAGGTTTGCACGGACAT...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR GCA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCTACCACCTTGTCTaGATCAAAGTCGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLVYHLV*IKVVLA
Trigger: TGCCAGGACGACTTTGATGCAGACAAGGTGGTAGAC...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCGTCTACCACCTTGTCTaGATCAAAGTCGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVVYHLV*IKVVLA
Trigger: TGCCAGGACGACTTTGATGCAGACAAGGTGGTAGAC...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACGTCTACCACCTTGTCTaGATCAAAGTCGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHVYHLV*IKVVLA
Trigger: TGCCAGGACGACTTTGATGCAGACAAGGTGGTAGAC...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTTGGTCTGTGTCCTTTTaGTCGTCGTTCTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPWSVSF*SSFFWD
Trigger: GTCCCAGAAGAACGACGACCAAAAGGACACAGACCA...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCCATCACTGTCCTTCTaGTCTGAGTTGGGTACCCTA +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPPSLSF*SELGTL
Trigger: TAGGGTACCCAACTCAGACCAGAAGGACAGTGATGG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCCATCACTGTCCTTCTaGTCTGAGTTGGGTACCCTA +
Preference number: 4 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVPSLSF*SELGTL
Trigger: TAGGGTACCCAACTCAGACCAGAAGGACAGTGATGG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCATCACTGTCCTTCTaGTCTGAGTTGGGTACCCTA +
Preference number: 4 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGPSLSF*SELGTL
Trigger: TAGGGTACCCAACTCAGACCAGAAGGACAGTGATGG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCATAGTCCTCTGGGATaGTGTCATTGCAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTHSPLG*CHCSGN
Trigger: GTTACCGCTGCAATGACACCATCCCAGAGGACTATG...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCATAGTCCTCTGGGATaGTGTCATTGCAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPHSPLG*CHCSGN
Trigger: GTTACCGCTGCAATGACACCATCCCAGAGGACTATG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCAGGACGGCCACCCCTTaGGGCTGGGTGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPRTATP*GWVQSP
Trigger: GGGGCTCTGCACCCAGCCCCAAGGGGTGGCCGTCCT...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCGCTCTCCGTCTGGATaGAGGCCACGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPRSPSG*RPRRGS
Trigger: GCTTCCCCGGCGTGGCCTGCATCCAGACGGAGAGCG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATTGGTCTGTGTCCTTTTaGTCGTCGTTCTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHWSVSF*SSFFWD
Trigger: GTCCCAGAAGAACGACGACCAAAAGGACACAGACCA...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGCATAGTCCTCTGGGATaGTGTCATTGCAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPHSPLG*CHCSGN
Trigger: GTTACCGCTGCAATGACACCATCCCAGAGGACTATG...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCTCCTACAGTCCGTTGTaGGGCCGTGGGCACGGCGCG +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPSYSPL*GRGHGA
Trigger: CGCGCCGTGCCCACGGCCCCACAACGGACTGTAGGA...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR CCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCAGTCTGCATGCTCGTaGCACTCGCTGGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPQSACS*HSLGEP
Trigger: CGGCTCGCCCAGCGAGTGCCACGAGCATGCAGACTG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR TCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCAGGAGCCCCGGGTGTTaGTGCACACGGAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPRSPGC*CTRSWG
Trigger: TCCCCAACTCCGTGTGCATCAACACCCGGGGCTCCT...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCAGTTGGGGTCAATCTaGGCGTCACCCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPQLGSI*ASPSGS
Trigger: GGACCCGGAGGGTGACGCGCAGATTGACCCCAACTG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCTTGACGTCGGTGCAGTaGGAGCCGTTGCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPLTSVQ*EPLPVK
Trigger: CTTCACGGGCAACGGCTCGCACTGCACCGACGTCAA...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCTGTCCAAGACCACGTTaGTGTCGGCCACCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPCPRPR*CRPPAQ
Trigger: CTGAGCTGGTGGCCGACAGCAACGTGGTCTTGGACA...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCTGGTCGTCGTTCTTCTaGGACCGGCAGTTGTCGCAC +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPWSSFF*DRQLSH
Trigger: GTGCGACAACTGCCGGTCCCAGAAGAACGACGACCA...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCACAGCAGCCGCACCTaGGACTCTGTGTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPHSSRT*DSVSPV
Trigger: TACAGGAGACACAGAGTCCCAGGTGCGGCTGCTGTG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCGGGACGCAGTTATGTTaGCCGGTCTCACACTCGTTG +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPGTQLC*PVSHSL
Trigger: CAACGAGTGTGAGACCGGGCAACATAACTGCGTCCC...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCGGAAGGGGTTCGCCTaGCAATACGTTTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPRKGFA*QYVCSI
Trigger: GATGGAGCAAACGTATTGGCAGGCGAACCCCTTCCG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCTTCACAGCCTTGAGTTaGATGCCAGGCTCGGCCACA +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPFTALS*MPGSAT
Trigger: TGTGGCCGAGCCTGGCATCCAACTCAAGGCTGTGAA...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR GCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCATGTCCGTGCAAACCTaGTTGTTGGCCTTGGCGAAA +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPMSVQT*LLALAK
Trigger: TTTCGCCAAGGCCAACAAGCAGGTTTGCACGGACAT...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CCA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCTGGTCTGTGTCCTTTTaGTCGTCGTTCTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPWSVSF*SSFFWD
Trigger: GTCCCAGAAGAACGACGACCAAAAGGACACAGACCA...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 90 bp CCGTCGGGGCAGAAGCGCTGTGCGCGCCGCTGGCAGCCGGACGCCTaGTCGCCCACGAAGCCGGGCTGGCACGGGCCGCACTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PSGQKRCARRWQPDA*SPTKPGWHGPHWKE
Trigger: CTCCTTCCAGTGCGGCCCGTGCCAGCCCGGCTTCGTGGGCGACCAGGCGTCCGGCTGCCAGCGGCGCGCACAGCGCTTCTGCCCCGACGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 90 bp ATGCTCGTGGCACTCGCTGGGCGAGCCGTCGGGGCAGAAGCGCTGTaGGCGCCGCTGGCAGCCGGACGCCTGGTCGCCCACGAAGCCGGG +
Preference number: 5 (lower is better)
Translates to: MLVALAGRAVGAEAL*APLAAGRLVAHEAG
Trigger: CCCGGCTTCGTGGGCGACCAGGCGTCCGGCTGCCAGCGGCGCGCACAGCGCTTCTGCCCCGACGGCTCGCCCAGCGAGTGCCACGAGCAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS TCA 90 bp CCAACGGGCTCTGGCCCTGTCCGGACGCGCCGAGGGCAGCCAGGGTaGGCAGAAGAACGCAGGCGGTGTCGGGGACCATGGCGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: PTGSGPVRTRRGQPG*AEERRRCRGPWRWR
Trigger: CCGCCACCGCCATGGTCCCCGACACCGCCTGCGTTCTTCTGCTCACCCTGGCTGCCCTCGGCGCGTCCGGACAGGGCCAGAGCCCGTTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGTGCAGTGCGAGCCGTaGCCCGTGAAGCCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGVQCEP*PVKPAG
Trigger: CCCCGCGGGCTTCACGGGCAACGGCTCGCACTGCAC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCAGGACGGCCACCCCTaGGGGCTGGGTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVQDGHP*GLGAEP
Trigger: GGGCTCTGCACCCAGCCCCAAGGGGTGGCCGTCCTG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCAGGACGGCCACCCCTaGGGGCTGGGTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGQDGHP*GLGAEP
Trigger: GGGCTCTGCACCCAGCCCCAAGGGGTGGCCGTCCTG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 90 bp CGGGGAAGCAGAAGCCGGGCGCGCAGTGGAGCAGGGGCCGCACGCTaGGTAGGCCGGTGCGTACTGACTGCTGCATCCCGCACGCGTCAC +
Preference number: 5 (lower is better)
Translates to: RGSRSRARSGAGAAR*VGRCVLTAASRTRH
Trigger: GTGACGCGTGCGGGATGCAGCAGTCAGTACGCACCGGCCTACCCAGCGTGCGGCCCCTGCTCCACTGCGCGCCCGGCTTCTGCTTCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 90 bp GTCTGGATGCAGGCCACGCCGGGGAAGCAGAAGCCGGGCGCGCAGTaGAGCAGGGGCCGCACGCTGGGTAGGCCGGTGCGTACTGACTGC +
Preference number: 5 (lower is better)
Translates to: VWMQATPGKQKPGAQ*SRGRTLGRPVRTDC
Trigger: GCAGTCAGTACGCACCGGCCTACCCAGCGTGCGGCCCCTGCTCCACTGCGCGCCCGGCTTCTGCTTCCCCGGCGTGGCCTGCATCCAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATGTGCAGTGCGAGCCGTaGCCCGTGAAGCCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHVQCEP*PVKPAG
Trigger: CCCCGCGGGCTTCACGGGCAACGGCTCGCACTGCAC...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGTGCAGTGCGAGCCGTaGCCCGTGAAGCCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPVQCEP*PVKPAG
Trigger: CCCCGCGGGCTTCACGGGCAACGGCTCGCACTGCAC...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCGGGTCCTACAGTCCGTaGTGGGGCCGTGGGCACGGC +
Preference number: 5 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVGSYSP*WGRGHG
Trigger: GCCGTGCCCACGGCCCCACAACGGACTGTAGGACCC...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS CCA 90 bp AGCCATCGCGCTCTAGGACGCAGTCTGCATGCTCGTGGCACTCGCTaGGCGAGCCGTCGGGGCAGAAGCGCTGTGCGCGCCGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SHRALGRSLHARGTR*ASRRGRSAVRAAGS
Trigger: GCTGCCAGCGGCGCGCACAGCGCTTCTGCCCCGACGGCTCGCCCAGCGAGTGCCACGAGCATGCAGACTGCGTCCTAGAGCGCGATGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCCACAGAGGATCCCGTaGCCGGCCCAGCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVPQRIP*PAQPTA
Trigger: TGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTGG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCCACAGAGGATCCCGTaGCCGGCCCAGCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPPQRIP*PAQPTA
Trigger: TGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTGG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGCACGCATCGCCCCACTaGTCCTCGTCCGTGTTGCGC +
Preference number: 5 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAHASPH*SSSVLR
Trigger: GCGCAACACGGACGAGGACAAGTGGGGCGATGCGTG...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCAGTTGTCGGCCTGGTaGCGGATCCGGTCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVQLSAW*RIRSPS
Trigger: CGACGGCGACCGGATCCGCAACCAGGCCGACAACTG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCAGTTGTCGGCCTGGTaGCGGATCCGGTCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHQLSAW*RIRSPS
Trigger: CGACGGCGACCGGATCCGCAACCAGGCCGACAACTG...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGTGGGCGTTGCACTCGTaGACGTCGGTGCAGTGCGAG +
Preference number: 5 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAWALHS*TSVQCE
Trigger: CTCGCACTGCACCGACGTCAACGAGTGCAACGCCCA...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTAACCCCGGGCTGGTGTaGATACAGCGGACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPNPGLV*IQRTRG
Trigger: CCCCCGAGTCCGCTGTATCAACACCAGCCCGGGGTT...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGAAGGAGCCCCGGGTGTaGATGCACACGGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAKEPRV*MHTELG
Trigger: CCCCAACTCCGTGTGCATCAACACCCGGGGCTCCTT...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCACAGAGGATCCCGTaGCCGGCCCAGCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHPQRIP*PAQPTA
Trigger: TGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTGG...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCACGCATCGCCCCACTaGTCCTCGTCCGTGTTGCGC +
Preference number: 5 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVHASPH*SSSVLR
Trigger: GCGCAACACGGACGAGGACAAGTGGGGCGATGCGTG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACGCATCGCCCCACTaGTCCTCGTCCGTGTTGCGC +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPHASPH*SSSVLR
Trigger: GCGCAACACGGACGAGGACAAGTGGGGCGATGCGTG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACTTCTGGGACCGGCAGTaGTCGCACGCATCGCCCCAC +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHFWDRQ*SHASPH
Trigger: GTGGGGCGATGCGTGCGACAACTGCCGGTCCCAGAA...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTTCTGGGACCGGCAGTaGTCGCACGCATCGCCCCAC +
Preference number: 5 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVFWDRQ*SHASPH
Trigger: GTGGGGCGATGCGTGCGACAACTGCCGGTCCCAGAA...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCGGCACCAGGCGGCAGTaGTCCCGACTGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTGTRRQ*SRLSGT
Trigger: AGTCCCTGACAGTCGGGACAACTGCCGCCTGGTGCC...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCGGCACCAGGCGGCAGTaGTCCCGACTGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVGTRRQ*SRLSGT
Trigger: AGTCCCTGACAGTCGGGACAACTGCCGCCTGGTGCC...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGCCACCCCGCATGGTaGTGTCCAAGACCACGTTGC +
Preference number: 5 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAGHPAW*CPRPRC
Trigger: GCAACGTGGTCTTGGACACAACCATGCGGGGTGGCC...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCCCTGGTCCCTAGGCTaGCCGCAGCTGATGGGTCTC +
Preference number: 5 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTPWSLG*PQLMGL
Trigger: GAGACCCATCAGCTGCGGCAAGCCTAGGGACCAGGG...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCCCTGGTCCCTAGGCTaGCCGCAGCTGATGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPPWSLG*PQLMGL
Trigger: GAGACCCATCAGCTGCGGCAAGCCTAGGGACCAGGG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCACCAACTCCCACCGTaGCAGCGAACCCGGACCTCC +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHHQLPP*QRTRTS
Trigger: GGAGGTCCGGGTTCGCTGCAACGGTGGGAGTTGGTG...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS GCA 90 bp CACACGCACGACCGCGAGCCATCGCGCTCTAGGACGCAGTCTGCATaGTCGTGGCACTCGCTGGGCGAGCCGTCGGGGCAGAAGCGCTGT +
Preference number: 5 (lower is better)
Translates to: HTHDREPSRSRTQSA*SWHSLGEPSGQKRC
Trigger: ACAGCGCTTCTGCCCCGACGGCTCGCCCAGCGAGTGCCACGAGCATGCAGACTGCGTCCTAGAGCGCGATGGCTCGCGGTCGTGCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 90 bp CCGGGAAGCCGTCTAGGTCAGTGTCGCGACCACAGAGGATCCCGTTaGCGGCCCAGCCAACGGCACACACGCACGACCGCGAGCCATCGC +
Preference number: 5 (lower is better)
Translates to: PGSRLGQCRDHRGSR*RPSQRHTRTTASHR
Trigger: GCGATGGCTCGCGGTCGTGCGTGTGTGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTGGTCGCGACACTGACCTAGACGGCTTCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 90 bp ACCTCCGAGGCCCCACTGCGCTCCTCTAGTCTCGGTCCCGCCACCTaGTTTCTGCGCCCGGCACGTCCCCTACGAACAGTCCGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: TSEAPLRSSSLGPAT*FLRPARPLRTVREP
Trigger: GGGCTCACGGACTGTTCGTAGGGGACGTGCCGGGCGCAGAAAGCAGGTGGCGGGACCGAGACTAGAGGAGCGCAGTGGGGCCTCGGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS GCA 90 bp ACCAACTCCCACCGTTGCAGCGAACCCGGACCTCCGAGGCCCCACTaGGCTCCTCTAGTCTCGGTCCCGCCACCTGCTTTCTGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: TNSHRCSEPGPPRPH*APLVSVPPPAFCAR
Trigger: CCGGGCGCAGAAAGCAGGTGGCGGGACCGAGACTAGAGGAGCGCAGTGGGGCCTCGGAGGTCCGGGTTCGCTGCAACGGTGGGAGTTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACAAGCAGGGGTGGGCGTaGCACTCGTTGACGTCGGTG +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHKQGWA*HSLTSV
Trigger: CACCGACGTCAACGAGTGCAACGCCCACCCCTGCTT...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGAAGCAGGGGTGGGCGTaGCACTCGTTGACGTCGGTG +
Preference number: 5 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLKQGWA*HSLTSV
Trigger: CACCGACGTCAACGAGTGCAACGCCCACCCCTGCTT...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATAACCCCGGGCTGGTGTaGATACAGCGGACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHNPGLV*IQRTRG
Trigger: CCCCCGAGTCCGCTGTATCAACACCAGCCCGGGGTT...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTACCTGCTTGTTGGCCTaGGCGAAAGCCAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPTCLLA*AKASPT
Trigger: CGTGGGGCTGGCTTTCGCCAAGGCCAACAAGCAGGT...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCACCTGCTTGTTGGCCTaGGCGAAAGCCAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTTCLLA*AKASPT
Trigger: CGTGGGGCTGGCTTTCGCCAAGGCCAACAAGCAGGT...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACAAGGAGCCCCGGGTGTaGATGCACACGGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHKEPRV*MHTELG
Trigger: CCCCAACTCCGTGTGCATCAACACCCGGGGCTCCTT...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTAAGGAGCCCCGGGTGTaGATGCACACGGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPKEPRV*MHTELG
Trigger: CCCCAACTCCGTGTGCATCAACACCCGGGGCTCCTT...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGGCACAGTCACGCAGTaGTCCTTACGGCACTGGCGC +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGGTVTQ*SLRHWR
Trigger: GCGCCAGTGCCGTAAGGACAACTGCGTGACTGTGCC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCTTGTCCTCGTCCGTGTaGCGCTGGTCTGGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTLSSSV*RWSGFR
Trigger: GCGGAACCCAGACCAGCGCAACACGGACGAGGACAA...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCTTGTCCTCGTCCGTGTaGCGCTGGTCTGGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVLSSSV*RWSGFR
Trigger: GCGGAACCCAGACCAGCGCAACACGGACGAGGACAA...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTTGTCCTCGTCCGTGTaGCGCTGGTCTGGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVLSSSV*RWSGFR
Trigger: GCGGAACCCAGACCAGCGCAACACGGACGAGGACAA...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATTTCTGGGACCGGCAGTaGTCGCACGCATCGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHFWDRQ*SHASPH
Trigger: GTGGGGCGATGCGTGCGACAACTGCCGGTCCCAGAA...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCGGTACCCTAGGGCAGTaGTCGGCCTGGTTGCGGATC +
Preference number: 5 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVGTLGQ*SAWLRI
Trigger: GATCCGCAACCAGGCCGACAACTGCCCTAGGGTACC...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCGGTACCCTAGGGCAGTaGTCGGCCTGGTTGCGGATC +
Preference number: 5 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTGTLGQ*SAWLRI
Trigger: GATCCGCAACCAGGCCGACAACTGCCCTAGGGTACC...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGGTACCCTAGGGCAGTaGTCGGCCTGGTTGCGGATC +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGGTLGQ*SAWLRI
Trigger: GATCCGCAACCAGGCCGACAACTGCCCTAGGGTACC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGTGTCCAAGACCACGTaGCTGTCGGCCACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GLGAEPPSSRGEGGCHPAVSKTT*LSATSS
Trigger: TGAGCTGGTGGCCGACAGCAACGTGGTCTTGGACAC...CGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGGCCACCCCGCATGGTaGTGTCCAAGACCACGTTGC +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGGHPAW*CPRPRC
Trigger: GCAACGTGGTCTTGGACACAACCATGCGGGGTGGCC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTGGCCACCCCGCATGGTaGTGTCCAAGACCACGTTGC +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPGHPAW*CPRPRC
Trigger: GCAACGTGGTCTTGGACACAACCATGCGGGGTGGCC...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCGGTCTCACACTCGTaGACGTCGGTGCAGTGCGAG +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGPVSHS*TSVQCE
Trigger: CTCGCACTGCACCGACGTCAACGAGTGTGAGACCGG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425807.1
CDS CCA 90 bp AAACAGCCTGGATCCCGGGCCTCTCACGGGTCCTACAGTCCGTTGTaGGGCCGTGGGCACGGCGCGGGTGCTAACGCGGCTTACCCAACG +
Preference number: 5 (lower is better)
Translates to: KQPGSRASHGSYSPL*GRGHGAGANAAYPT
Trigger: CGTTGGGTAAGCCGCGTTAGCACCCGCGCCGTGCCCACGGCCCCACAACGGACTGTAGGACCCGTGAGAGGCCCGGGATCCAGGCTGTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR CAA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTGGGCGTTGCACTCGTaGACGTCGGTGCAGTGCGAG +
Preference number: 5 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPWALHS*TSVQCE
Trigger: CTCGCACTGCACCGACGTCAACGAGTGCAACGCCCA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCGCACCAGCGGGCAGTaGTCCTTTTCATTGGGGACC +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHRTSGQ*SFSLGT
Trigger: GGTCCCCAATGAAAAGGACAACTGCCCGCTGGTGCG...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCGCACCAGCGGGCAGTaGTCCTTTTCATTGGGGACC +
Preference number: 5 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVRTSGQ*SFSLGT
Trigger: GGTCCCCAATGAAAAGGACAACTGCCCGCTGGTGCG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACATCTCCCTTCCCTGGTaGAGCACCACCCAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHISLPW*STTQLG
Trigger: CCCCAACTGGGTGGTGCTCAACCAGGGAAGGGAGAT...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTATCTCCCTTCCCTGGTaGAGCACCACCCAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGISLPW*STTQLG
Trigger: CCCCAACTGGGTGGTGCTCAACCAGGGAAGGGAGAT...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCTTCACAGCCTTGAGTaGGATGCCAGGCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLLHSLE*DARLGH
Trigger: GTGGCCGAGCCTGGCATCCAACTCAAGGCTGTGAAG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCTTCACAGCCTTGAGTaGGATGCCAGGCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPLHSLE*DARLGH
Trigger: GTGGCCGAGCCTGGCATCCAACTCAAGGCTGTGAAG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCGTGTCCAAGACCACGTaGCTGTCGGCCACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVVSKTT*LSATSS
Trigger: TGAGCTGGTGGCCGACAGCAACGTGGTCTTGGACAC...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACGTGTCCAAGACCACGTaGCTGTCGGCCACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHVSKTT*LSATSS
Trigger: TGAGCTGGTGGCCGACAGCAACGTGGTCTTGGACAC...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS TCA 90 bp CGCCACCTGCTTTCTGCGCCCGGCACGTCCCCTACGAACAGTCCGTaGGCCCCAAACAGCCTGGATCCCGGGCCTCTCACGGGTCCTACA +
Preference number: 5 (lower is better)
Translates to: RHLLSAPGTSPTNSP*APNSLDPGPLTGPT
Trigger: TGTAGGACCCGTGAGAGGCCCGGGATCCAGGCTGTTTGGGGCTCACGGACTGTTCGTAGGGGACGTGCCGGGCGCAGAAAGCAGGTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTGTGCAAACCTGCTTGTaGGCCTTGGCGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGVQTCL*ALAKAS
Trigger: GCTGGCTTTCGCCAAGGCCAACAAGCAGGTTTGCAC...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCGTGCAAACCTGCTTGTaGGCCTTGGCGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTVQTCL*ALAKAS
Trigger: GCTGGCTTTCGCCAAGGCCAACAAGCAGGTTTGCAC...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS CCA 90 bp TCGTCGTCGCACGCATCGCCCCGGCCGTCCTGGTCTGTGTCCTTTTaGTCGTCGTTCTTCTGGGACCGGCAGTTGTCGCACGCATCGCCC +
Preference number: 5 (lower is better)
Translates to: SSSHASPRPSWSVSF*SSFFWDRQLSHASP
Trigger: GGGCGATGCGTGCGACAACTGCCGGTCCCAGAAGAACGACGACCAAAAGGACACAGACCAGGACGGCCGGGGCGATGCGTGCGACGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 90 bp CGGTCGCCGTCGATGTCGTCGTCGCACGCATCGCCCCGGCCGTCCTaGTCTGTGTCCTTTTGGTCGTCGTTCTTCTGGGACCGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RSPSMSSSHASPRPS*SVSFWSSFFWDRQL
Trigger: CAACTGCCGGTCCCAGAAGAACGACGACCAAAAGGACACAGACCAGGACGGCCGGGGCGATGCGTGCGACGACGACATCGACGGCGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATTCCGTGCAAACCTGCTaGTTGGCCTTGGCGAAAGCC +
Preference number: 5 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHSVQTC*LALAKA
Trigger: GGCTTTCGCCAAGGCCAACAAGCAGGTTTGCACGGA...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTTCCTTCTGGTCTGAGTaGGGTACCCTAGGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGSFWSE*GTLGQL
Trigger: CAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGA...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTCCTTCTGGTCTGAGTaGGGTACCCTAGGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVSFWSE*GTLGQL
Trigger: CAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGA...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCTCCTTCTGGTCTGAGTaGGGTACCCTAGGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVSFWSE*GTLGQL
Trigger: CAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGA...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTGGGTCGCTGTTCATaGTCTGCACGATCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGLGRCS*SARSPF
Trigger: GAAGGGAGATCGTGCAGACAATGAACAGCGACCCAG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGGTCGCTGTTCATaGTCTGCACGATCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTLGRCS*SARSPF
Trigger: GAAGGGAGATCGTGCAGACAATGAACAGCGACCCAG...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTGAAGACTTCACAGCCTaGAGTTGGATGCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPEDFTA*SWMPGS
Trigger: CGAGCCTGGCATCCAACTCAAGGCTGTGAAGTCTTC...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCTGGTCTGTGTCCTTTaGGTCGTCGTTCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVLVCVL*VVVLLG
Trigger: TCCCAGAAGAACGACGACCAAAAGGACACAGACCAG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTGGTCTGTGTCCTTTaGGTCGTCGTTCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: WVQSPHPAAVRVAVIRRVLVCVL*VVVLLG
Trigger: TCCCAGAAGAACGACGACCAAAAGGACACAGACCAG...GACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGCTCTTCTGGGGACAGTaGTCACAGGCATCCCCTATA +
Preference number: 5 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLLFWGQ*SQASPI
Trigger: TATAGGGGATGCCTGTGACAACTGTCCCCAGAAGAG...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCTCTTCTGGGGACAGTaGTCACAGGCATCCCCTATA +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGLFWGQ*SQASPI
Trigger: TATAGGGGATGCCTGTGACAACTGTCCCCAGAAGAG...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTCTTCTGGGGACAGTaGTCACAGGCATCCCCTATA +
Preference number: 5 (lower is better)
Translates to: QSPHPAAVRVAVIRRVLTLFWGQ*SQASPI
Trigger: TATAGGGGATGCCTGTGACAACTGTCCCCAGAAGAG...GGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACGTCTCCATCCTGGTCTaGATCGCTGTCACAAGCATC +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHVSILV*IAVTSI
Trigger: GATGCTTGTGACAGCGATCAAGACCAGGATGGAGAC...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp AGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGGACACACGTCGATCTaGTCTACCACCTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: SPHPAAVRVAVIRRVLTLGHTSI*STTLSA
Trigger: TGCAGACAAGGTGGTAGACAAGATCGACGTGTGTCC...CAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGAAGACTTCACAGCCTaGAGTTGGATGCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPEDFTA*SWMPGS
Trigger: CGAGCCTGGCATCCAACTCAAGGCTGTGAAGTCTTC...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCAGGACGGCCACCCCTaGGGGCTGGGTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPQDGHP*GLGAEP
Trigger: GGGCTCTGCACCCAGCCCCAAGGGGTGGCCGTCCTG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGTTGATGCACACGGAGTaGGGGACGCAGTTATGTTGC +
Preference number: 5 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPLMHTE*GTQLCC
Trigger: GCAACATAACTGCGTCCCCAACTCCGTGTGCATCAA...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATTTGATGCACACGGAGTaGGGGACGCAGTTATGTTGC +
Preference number: 5 (lower is better)
Translates to: PLGLGAEPPSSRGEGGCHLMHTE*GTQLCC
Trigger: GCAACATAACTGCGTCCCCAACTCCGTGTGCATCAA...ATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTATCTTGTCTACCACCTaGTCTGCATCAAAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LGAEPPSSRGEGGCHPAGILSTT*SASKSS
Trigger: GGACGACTTTGATGCAGACAAGGTGGTAGACAAGAT...ACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACATCTTGTCTACCACCTaGTCTGCATCAAAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: AEPPSSRGEGGCHPAGPHILSTT*SASKSS
Trigger: GGACGACTTTGATGCAGACAAGGTGGTAGACAAGAT...GTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCGGCACCAGGCGGCAGTaGTCCCGACTGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPGTRRQ*SRLSGT
Trigger: AGTCCCTGACAGTCGGGACAACTGCCGCCTGGTGCC...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGATCTTGTCTACCACCTaGTCTGCATCAAAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPILSTT*SASKSS
Trigger: GGACGACTTTGATGCAGACAAGGTGGTAGACAAGAT...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCCCTGGTCCCTAGGCTaGCCGCAGCTGATGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPPWSLG*PQLMGL
Trigger: GAGACCCATCAGCTGCGGCAAGCCTAGGGACCAGGG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp GGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACACACACTTTATTTaGTCCTCTCTGAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: GAEPPSSRGEGGCHPAGPHTHFI*SSLSPS
Trigger: AGAAGGGCTCAGAGAGGACAAAATAAAGTGTGTGTG...AGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCACACACACTTTATTTaGTCCTCTCTGAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: PHPAAVRVAVIRRVLTLVHTHFI*SSLSPS
Trigger: AGAAGGGCTCAGAGAGGACAAAATAAAGTGTGTGTG...GACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 90 bp CTGTCCTTCTGGTCTGAGTTGGGTACCCTAGGGCAGTTGTCGGCCTaGTTGCGGATCCCTGCAGAAATCCACGGGACCAGAGCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: LSFWSELGTLGQLSA*LRIPAEIHGTRAPR
Trigger: TCTTGGGGCTCTGGTCCCGTGGATTTCTGCAGGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612179.1
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCGGCACAGTCACGCAGTaGTCCTTACGGCACTGGCGC +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPGTVTQ*SLRHWR
Trigger: GCGCCAGTGCCGTAAGGACAACTGCGTGACTGTGCC...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp TTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGCACACACACTTTATTTaGTCCTCTCTGAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: LGLGAEPPSSRGEGGCHPHTHFI*SSLSPS
Trigger: AGAAGGGCTCAGAGAGGACAAAATAAAGTGTGTGTG...CGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 90 bp TTCAGCGTTCTCCGGACACACGTCGATCTTGTCTACCACCTTGTCTaGATCAAAGTCGTCCTGGCACACGTCGCCCACGCCGTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: FSVLRTHVDLVYHLV*IKVVLAHVAHAVPV
Trigger: GACAGGGACGGCGTGGGCGACGTGTGCCAGGACGACTTTGATGCAGACAAGGTGGTAGACAAGATCGACGTGTGTCCGGAGAACGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCATCTCCCTTCCCTGGTaGAGCACCACCCAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPISLPW*STTQLG
Trigger: CCCCAACTGGGTGGTGCTCAACCAGGGAAGGGAGAT...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCTTCACAGCCTTGAGTaGGATGCCAGGCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPLHSLE*DARLGH
Trigger: GTGGCCGAGCCTGGCATCCAACTCAAGGCTGTGAAG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCTCCGTGCAAACCTGCTaGTTGGCCTTGGCGAAAGCC +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPSVQTC*LALAKA
Trigger: GGCTTTCGCCAAGGCCAACAAGCAGGTTTGCACGGA...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCCTGGGTCGCTGTTCATaGTCTGCACGATCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPLGRCS*SARSPF
Trigger: GAAGGGAGATCGTGCAGACAATGAACAGCGACCCAG...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCGAAGACTTCACAGCCTaGAGTTGGATGCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPEDFTA*SWMPGS
Trigger: CGAGCCTGGCATCCAACTCAAGGCTGTGAAGTCTTC...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCTTGATGCACACGGAGTaGGGGACGCAGTTATGTTGC +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPLMHTE*GTQLCC
Trigger: GCAACATAACTGCGTCCCCAACTCCGTGTGCATCAA...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS-3UTR CAA 90 bp CTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCGTCTCCATCCTGGTCTaGATCGCTGTCACAAGCATC +
Preference number: 5 (lower is better)
Translates to: LYFVLSEPFSLPPQDGHPVSILV*IAVTSI
Trigger: GATGCTTGTGACAGCGATCAAGACCAGGATGGAGAC...GGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp GGCAGGGGCCGCAGCGCGCGCCGCTCTCCGTCTGGATaGAGGCCACGCCGGGGAAGCAGAAGCCGGGCGCGC +
Preference number: 6 (lower is better)
Translates to: GRGRSARRSPSG*RPRRGSRSRAR
Trigger: GCGCGCCCGGCTTCTGCTTCCCCGGCGTGGCCTGCATCCAGACGGAGAGCGGCGCGCGCTGCGGCCCCTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp GGCGAGCCGTCGGGGCAGAAGCGCTGTGCGCGCCGCTaGCAGCCGGACGCCTGGTCGCCCACGAAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: GEPSGQKRCARR*QPDAWSPTKPG
Trigger: GCCCGGCTTCGTGGGCGACCAGGCGTCCGGCTGCCAGCGGCGCGCACAGCGCTTCTGCCCCGACGGCTCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp GCACTCGCTGGGCGAGCCGTCGGGGCAGAAGCGCTGTaGGCGCCGCTGGCAGCCGGACGCCTGGTCGCCCAC +
Preference number: 6 (lower is better)
Translates to: ALAGRAVGAEAL*APLAAGRLVAH
Trigger: GTGGGCGACCAGGCGTCCGGCTGCCAGCGGCGCGCACAGCGCTTCTGCCCCGACGGCTCGCCCAGCGAGTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp CAGAAGCGCTGTGCGCGCCGCTGGCAGCCGGACGCCTaGTCGCCCACGAAGCCGGGCTGGCACGGGCCGCAC +
Preference number: 6 (lower is better)
Translates to: QKRCARRWQPDA*SPTKPGWHGPH
Trigger: GTGCGGCCCGTGCCAGCCCGGCTTCGTGGGCGACCAGGCGTCCGGCTGCCAGCGGCGCGCACAGCGCTTCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp CAGGCCACGCCGGGGAAGCAGAAGCCGGGCGCGCAGTaGAGCAGGGGCCGCACGCTGGGTAGGCCGGTGCGT +
Preference number: 6 (lower is better)
Translates to: QATPGKQKPGAQ*SRGRTLGRPVR
Trigger: ACGCACCGGCCTACCCAGCGTGCGGCCCCTGCTCCACTGCGCGCCCGGCTTCTGCTTCCCCGGCGTGGCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp TGGCCTTGGCGAAAGCCAGCCCCACGCCCTGGTGGGTaGGGCCGCTGTACCCCGGCGGGCAAGCCTCGCAGC +
Preference number: 6 (lower is better)
Translates to: WPWRKPAPRPGG*GRCTPAGKPRS
Trigger: GCTGCGAGGCTTGCCCGCCGGGGTACAGCGGCCCCACCCACCAGGGCGTGGGGCTGGCTTTCGCCAAGGCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS CCA 72 bp TGGCAGCCGGACGCCTGGTCGCCCACGAAGCCGGGCTaGCACGGGCCGCACTGGAAGGAGCCCCGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: WQPDAWSPTKPG*HGPHWKEPRVL
Trigger: CAACACCCGGGGCTCCTTCCAGTGCGGCCCGTGCCAGCCCGGCTTCGTGGGCGACCAGGCGTCCGGCTGCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp CAGGGGTGGGCGTTGCACTCGTTGACGTCGGTGCAGTaGGAGCCGTTGCCCGTGAAGCCCGCGGGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: QGWALHSLTSVQ*EPLPVKPAGQG
Trigger: CCCCTGCCCCGCGGGCTTCACGGGCAACGGCTCGCACTGCACCGACGTCAACGAGTGCAACGCCCACCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS CCA 72 bp AGAAGCCGGGCGCGCAGTGGAGCAGGGGCCGCACGCTaGGTAGGCCGGTGCGTACTGACTGCTGCATCCCGC +
Preference number: 6 (lower is better)
Translates to: RSRARSGAGAAR*VGRCVLTAASR
Trigger: GCGGGATGCAGCAGTCAGTACGCACCGGCCTACCCAGCGTGCGGCCCCTGCTCCACTGCGCGCCCGGCTTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp GGATCCCGGGCCTCTCACGGGTCCTACAGTCCGTTGTaGGGCCGTGGGCACGGCGCGGGTGCTAACGCGGCT +
Preference number: 6 (lower is better)
Translates to: GSRASHGSYSPL*GRGHGAGANAA
Trigger: AGCCGCGTTAGCACCCGCGCCGTGCCCACGGCCCCACAACGGACTGTAGGACCCGTGAGAGGCCCGGGATCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS CAA 72 bp CCTGGATCCCGGGCCTCTCACGGGTCCTACAGTCCGTaGTGGGGCCGTGGGCACGGCGCGGGTGCTAACGCG +
Preference number: 6 (lower is better)
Translates to: PGSRASHGSYSP*WGRGHGAGANA
Trigger: CGCGTTAGCACCCGCGCCGTGCCCACGGCCCCACAACGGACTGTAGGACCCGTGAGAGGCCCGGGATCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS TCA 72 bp TCTGGCCCTGTCCGGACGCGCCGAGGGCAGCCAGGGTaGGCAGAAGAACGCAGGCGGTGTCGGGGACCATGG +
Preference number: 6 (lower is better)
Translates to: SGPVRTRRGQPG*AEERRRCRGPW
Trigger: CCATGGTCCCCGACACCGCCTGCGTTCTTCTGCTCACCCTGGCTGCCCTCGGCGCGTCCGGACAGGGCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp GACCGCGAGCCATCGCGCTCTAGGACGCAGTCTGCATaGTCGTGGCACTCGCTGGGCGAGCCGTCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: DREPSRSRTQSA*SWHSLGEPSGQ
Trigger: CTGCCCCGACGGCTCGCCCAGCGAGTGCCACGAGCATGCAGACTGCGTCCTAGAGCGCGATGGCTCGCGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 90 bp CCCAAACAGCCTGGATCCCGGGCCTCTCACGGGTCCTACAGTCCGTaGTGGGGCCGTGGGCACGGCGCGGGTGCTAACGCGGCTTACCCA +
Preference number: 6 (lower is better)
Translates to: PKQPGSRASHGSYSP*WGRGHGAGANAAYP
Trigger: TGGGTAAGCCGCGTTAGCACCCGCGCCGTGCCCACGGCCCCACAACGGACTGTAGGACCCGTGAGAGGCCCGGGATCCAGGCTGTTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS GCA 72 bp CGCAGTGGAGCAGGGGCCGCACGCTGGGTAGGCCGGTaGGTACTGACTGCTGCATCCCGCACGCGTCACACT +
Preference number: 6 (lower is better)
Translates to: RSGAGAARWVGR*VLTAASRTRHT
Trigger: AGTGTGACGCGTGCGGGATGCAGCAGTCAGTACGCACCGGCCTACCCAGCGTGCGGCCCCTGCTCCACTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp GAGCCATCGCGCTCTAGGACGCAGTCTGCATGCTCGTaGCACTCGCTGGGCGAGCCGTCGGGGCAGAAGCGC +
Preference number: 6 (lower is better)
Translates to: EPSRSRTQSACS*HSLGEPSGQKR
Trigger: GCGCTTCTGCCCCGACGGCTCGCCCAGCGAGTGCCACGAGCATGCAGACTGCGTCCTAGAGCGCGATGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 90 bp TCCGGGAAGCCGTCTAGGTCAGTGTCGCGACCACAGAGGATCCCGTaGCCGGCCCAGCCAACGGCACACACGCACGACCGCGAGCCATCG +
Preference number: 6 (lower is better)
Translates to: SGKPSRSVSRPQRIP*PAQPTAHTHDREPS
Trigger: CGATGGCTCGCGGTCGTGCGTGTGTGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTGGTCGCGACACTGACCTAGACGGCTTCCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp CGTCTAGGTCAGTGTCGCGACCACAGAGGATCCCGTTaGCGGCCCAGCCAACGGCACACACGCACGACCGCG +
Preference number: 6 (lower is better)
Translates to: RLGQCRDHRGSR*RPSQRHTRTTA
Trigger: CGCGGTCGTGCGTGTGTGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTGGTCGCGACACTGACCTAGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp CGTCCCCGTCGGCATCCGGATCGCAGGCGTCTCCGATaGCATCGCGGTCCACATCCTCCTGCCCTGAGTTGG +
Preference number: 6 (lower is better)
Translates to: RPRRHPDRRRLR*HRGPHPPALSW
Trigger: CCAACTCAGGGCAGGAGGATGTGGACCGCGATGGCATCGGAGACGCCTGCGATCCGGATGCCGACGGGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp GCCCCACTGCGCTCCTCTAGTCTCGGTCCCGCCACCTaGTTTCTGCGCCCGGCACGTCCCCTACGAACAGTC +
Preference number: 6 (lower is better)
Translates to: APLRSSSLGPAT*FLRPARPLRTV
Trigger: GACTGTTCGTAGGGGACGTGCCGGGCGCAGAAAGCAGGTGGCGGGACCGAGACTAGAGGAGCGCAGTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS GCA 72 bp CACCGTTGCAGCGAACCCGGACCTCCGAGGCCCCACTaGGCTCCTCTAGTCTCGGTCCCGCCACCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: HRCSEPGPPRPH*APLVSVPPPAF
Trigger: GAAAGCAGGTGGCGGGACCGAGACTAGAGGAGCGCAGTGGGGCCTCGGAGGTCCGGGTTCGCTGCAACGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS CAA 72 bp CCGTCTAGGTCAGTGTCGCGACCACAGAGGATCCCGTaGCCGGCCCAGCCAACGGCACACACGCACGACCGC +
Preference number: 6 (lower is better)
Translates to: PSRSVSRPQRIP*PAQPTAHTHDR
Trigger: GCGGTCGTGCGTGTGTGCCGTTGGCTGGGCCGGCAACGGGATCCTCTGTGGTCGCGACACTGACCTAGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 90 bp TCCCTGTCCGCGTCCTCCTGGCCGGGGTTAGGCACCAGGCGGCAGTaGTCCCGACTGTCAGGGACTCCGTCATTGTCGTCGTCGTCGTCG +
Preference number: 6 (lower is better)
Translates to: SLSASSWPGLGTRRQ*SRLSGTPSLSSSSS
Trigger: CGACGACGACGACGACAATGACGGAGTCCCTGACAGTCGGGACAACTGCCGCCTGGTGCCTAACCCCGGCCAGGAGGACGCGGACAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS TCA 72 bp CTTTCTGCGCCCGGCACGTCCCCTACGAACAGTCCGTaGGCCCCAAACAGCCTGGATCCCGGGCCTCTCACG +
Preference number: 6 (lower is better)
Translates to: LSAPGTSPTNSP*APNSLDPGPLT
Trigger: CGTGAGAGGCCCGGGATCCAGGCTGTTTGGGGCTCACGGACTGTTCGTAGGGGACGTGCCGGGCGCAGAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS GCA 72 bp AGCTCCCGCACGTCCTGCAGCGCCGCGTTGGTTTCCTaGAGTTCCCGAAGCATCTGCGGGCCCAGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SSRTSCSAALVS*SSRSICGPRSE
Trigger: CTCAGACCTGGGCCCGCAGATGCTTCGGGAACTGCAGGAAACCAACGCGGCGCTGCAGGACGTGCGGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp TGCGCTCCTCTAGTCTCGGTCCCGCCACCTGCTTTCTaGGCCCGGCACGTCCCCTACGAACAGTCCGTGAGC +
Preference number: 6 (lower is better)
Translates to: CAPLVSVPPPAF*ARHVPYEQSVS
Trigger: GCTCACGGACTGTTCGTAGGGGACGTGCCGGGCGCAGAAAGCAGGTGGCGGGACCGAGACTAGAGGAGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542601.6
CDS CAA 72 bp GCGTCCTCCTGGCCGGGGTTAGGCACCAGGCGGCAGTaGTCCCGACTGTCAGGGACTCCGTCATTGTCGTCG +
Preference number: 6 (lower is better)
Translates to: ASSWPGLGTRRQ*SRLSGTPSLSS
Trigger: CGACGACAATGACGGAGTCCCTGACAGTCGGGACAACTGCCGCCTGGTGCCTAACCCCGGCCAGGAGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 90 bp TCGTCGTTCTTCTGGGACCGGCAGTTGTCGCACGCATCGCCCCACTaGTCCTCGTCCGTGTTGCGCTGGTCTGGGTTCCGCACCAGCGGG +
Preference number: 6 (lower is better)
Translates to: SSFFWDRQLSHASPH*SSSVLRWSGFRTSG
Trigger: CCCGCTGGTGCGGAACCCAGACCAGCGCAACACGGACGAGGACAAGTGGGGCGATGCGTGCGACAACTGCCGGTCCCAGAAGAACGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 90 bp GTCGTCGTCGCACGCATCGCCCCGGCCGTCCTGGTCTGTGTCCTTTaGGTCGTCGTTCTTCTGGGACCGGCAGTTGTCGCACGCATCGCC +
Preference number: 6 (lower is better)
Translates to: VVVARIAPAVLVCVL*VVVLLGPAVVARIA
Trigger: GGCGATGCGTGCGACAACTGCCGGTCCCAGAAGAACGACGACCAAAAGGACACAGACCAGGACGGCCGGGGCGATGCGTGCGACGACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp GGCGGCCACCCCGCATGGTTGTGTCCAAGACCACGTTaGTGTCGGCCACCAGCTCAGGGCCCTCATAGAATC +
Preference number: 6 (lower is better)
Translates to: GGHPAWLCPRPR*CRPPAQGPHRI
Trigger: GATTCTATGAGGGCCCTGAGCTGGTGGCCGACAGCAACGTGGTCTTGGACACAACCATGCGGGGTGGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp CACGCATCGCCCCGGCCGTCCTGGTCTGTGTCCTTTTaGTCGTCGTTCTTCTGGGACCGGCAGTTGTCGCAC +
Preference number: 6 (lower is better)
Translates to: HASPRPSWSVSF*SSFFWDRQLSH
Trigger: GTGCGACAACTGCCGGTCCCAGAAGAACGACGACCAAAAGGACACAGACCAGGACGGCCGGGGCGATGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp TGGTCTGAGTTGGGTACCCTAGGGCAGTTGTCGGCCTaGTTGCGGATCCGGTCGCCGTCGATGTCGTCGTCG +
Preference number: 6 (lower is better)
Translates to: WSELGTLGQLSA*LRIRSPSMSSS
Trigger: CGACGACGACATCGACGGCGACCGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 72 bp GCACGCATCGCCCCGGCCGTCCTGGTCTGTGTCCTTTaGGTCGTCGTTCTTCTGGGACCGGCAGTTGTCGCA +
Preference number: 6 (lower is better)
Translates to: ARIAPAVLVCVL*VVVLLGPAVVA
Trigger: TGCGACAACTGCCGGTCCCAGAAGAACGACGACCAAAAGGACACAGACCAGGACGGCCGGGGCGATGCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 90 bp TCGCCATCACTGTCCTTCTGGTCTGAGTTGGGTACCCTAGGGCAGTaGTCGGCCTGGTTGCGGATCCGGTCGCCGTCGATGTCGTCGTCG +
Preference number: 6 (lower is better)
Translates to: SPSLSFWSELGTLGQ*SAWLRIRSPSMSSS
Trigger: CGACGACGACATCGACGGCGACCGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGACAGTGATGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 72 bp CTGTCCTTCTGGTCTGAGTTGGGTACCCTAGGGCAGTaGTCGGCCTGGTTGCGGATCCGGTCGCCGTCGATG +
Preference number: 6 (lower is better)
Translates to: LSFWSELGTLGQ*SAWLRIRSPSM
Trigger: CATCGACGGCGACCGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 72 bp CTGTCATCCGGCGGGTCCTCACCCTGGTCCCTAGGCTaGCCGCAGCTGATGGGTCTCATAGTCCTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: LSSGGSSPWSLG*PQLMGLIVLWD
Trigger: ATCCCAGAGGACTATGAGACCCATCAGCTGCGGCAAGCCTAGGGACCAGGGTGAGGACCCGCCGGATGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 90 bp TCCTGGTCTGTGTCCTTTTGGTCGTCGTTCTTCTGGGACCGGCAGTaGTCGCACGCATCGCCCCACTTGTCCTCGTCCGTGTTGCGCTGG +
Preference number: 6 (lower is better)
Translates to: SWSVSFWSSFFWDRQ*SHASPHLSSSVLRW
Trigger: CCAGCGCAACACGGACGAGGACAAGTGGGGCGATGCGTGCGACAACTGCCGGTCCCAGAAGAACGACGACCAAAAGGACACAGACCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS GCA 72 bp TACCCTAGGGCAGTTGTCGGCCTGGTTGCGGATCCCTaGAGAAATCCACGGGACCAGAGCCCCAAGATTGGG +
Preference number: 6 (lower is better)
Translates to: YPRAVVGLVADP*RNPRDQSPKIG
Trigger: CCCAATCTTGGGGCTCTGGTCCCGTGGATTTCTGCAGGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612179.1
CDS CCA 72 bp CCGTCCTGGTCTGTGTCCTTTTGGTCGTCGTTCTTCTaGGACCGGCAGTTGTCGCACGCATCGCCCCACTTG +
Preference number: 6 (lower is better)
Translates to: PSWSVSFWSSFF*DRQLSHASPHL
Trigger: CAAGTGGGGCGATGCGTGCGACAACTGCCGGTCCCAGAAGAACGACGACCAAAAGGACACAGACCAGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp ATCTTGTCTACCACCTTGTCTGCATCAAAGTCGTCCTaGCACACGTCGCCCACGCCGTCCCTGTCCGCGTCC +
Preference number: 6 (lower is better)
Translates to: ILSTTLSASKSS*HTSPTPSLSAS
Trigger: GGACGCGGACAGGGACGGCGTGGGCGACGTGTGCCAGGACGACTTTGATGCAGACAAGGTGGTAGACAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 72 bp TCTGAGTTGGGTACCCTAGGGCAGTTGTCGGCCTGGTaGCGGATCCCTGCAGAAATCCACGGGACCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SELGTLGQLSAW*RIPAEIHGTRA
Trigger: GGCTCTGGTCCCGTGGATTTCTGCAGGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612179.1
CDS GCA 72 bp CTCCGGACACACGTCGATCTTGTCTACCACCTTGTCTaGATCAAAGTCGTCCTGGCACACGTCGCCCACGCC +
Preference number: 6 (lower is better)
Translates to: LRTHVDLVYHLV*IKVVLAHVAHA
Trigger: GGCGTGGGCGACGTGTGCCAGGACGACTTTGATGCAGACAAGGTGGTAGACAAGATCGACGTGTGTCCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CCA 72 bp TGGTCTGAGTTGGGTACCCTAGGGCAGTTGTCGGCCTaGTTGCGGATCCCTGCAGAAATCCACGGGACCAGA +
Preference number: 6 (lower is better)
Translates to: WSELGTLGQLSA*LRIPAEIHGTR
Trigger: TCTGGTCCCGTGGATTTCTGCAGGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612179.1
CDS CAA 90 bp GTGACTTCAGCGTTCTCCGGACACACGTCGATCTTGTCTACCACCTaGTCTGCATCAAAGTCGTCCTGGCACACGTCGCCCACGCCGTCC +
Preference number: 6 (lower is better)
Translates to: VTSAFSGHTSILSTT*SASKSSWHTSPTPS
Trigger: GGACGGCGTGGGCGACGTGTGCCAGGACGACTTTGATGCAGACAAGGTGGTAGACAAGATCGACGTGTGTCCGGAGAACGCTGAAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 90 bp TCCTTCTGGTCTGAGTTGGGTACCCTAGGGCAGTTGTCGGCCTGGTaGCGGATCCCTGCAGAAATCCACGGGACCAGAGCCCCAAGATTG +
Preference number: 6 (lower is better)
Translates to: SFWSELGTLGQLSAW*RIPAEIHGTRAPRL
Trigger: CAATCTTGGGGCTCTGGTCCCGTGGATTTCTGCAGGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612179.1
CDS CAA 90 bp TCGCCATCACTGTCCTTCTGGTCTGAGTTGGGTACCCTAGGGCAGTaGTCGGCCTGGTTGCGGATCCCTGCAGAAATCCACGGGACCAGA +
Preference number: 6 (lower is better)
Translates to: SPSLSFWSELGTLGQ*SAWLRIPAEIHGTR
Trigger: TCTGGTCCCGTGGATTTCTGCAGGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGACAGTGATGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612179.1
CDS CAA 72 bp GCGTTCTCCGGACACACGTCGATCTTGTCTACCACCTaGTCTGCATCAAAGTCGTCCTGGCACACGTCGCCC +
Preference number: 6 (lower is better)
Translates to: AFSGHTSILSTT*SASKSSWHTSP
Trigger: GGGCGACGTGTGCCAGGACGACTTTGATGCAGACAAGGTGGTAGACAAGATCGACGTGTGTCCGGAGAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS CAA 72 bp CTGTCCTTCTGGTCTGAGTTGGGTACCCTAGGGCAGTaGTCGGCCTGGTTGCGGATCCCTGCAGAAATCCAC +
Preference number: 6 (lower is better)
Translates to: LSFWSELGTLGQ*SAWLRIPAEIH
Trigger: GTGGATTTCTGCAGGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612179.1
CDS TCA 72 bp TGGGGACGCAGTTATGTTGCCCGGTCTCACACTCGTTaGTGTCCGTGCAAACCTGCTTGTTGGCCTTGGCGA +
Preference number: 6 (lower is better)
Translates to: WGRSYVARSHTR*CPCKPACWPWR
Trigger: TCGCCAAGGCCAACAAGCAGGTTTGCACGGACATCAACGAGTGTGAGACCGGGCAACATAACTGCGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS CAA 72 bp TTGGGGACGCAGTTATGTTGCCCGGTCTCACACTCGTaGATGTCCGTGCAAACCTGCTTGTTGGCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: LGTQLCCPVSHS*MSVQTCLLALA
Trigger: CGCCAAGGCCAACAAGCAGGTTTGCACGGACATCAACGAGTGTGAGACCGGGCAACATAACTGCGTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222271.7
ENST00000542601.6
CDS CAA 90 bp AAGTCGGTGAGCGTGACTTCAGCGTTCTCCGGACACACGTCGATCTaGTCTACCACCTTGTCTGCATCAAAGTCGTCCTGGCACACGTCG +
Preference number: 6 (lower is better)
Translates to: KSVSVTSAFSGHTSI*STTLSASKSSWHTS
Trigger: CGACGTGTGCCAGGACGACTTTGATGCAGACAAGGTGGTAGACAAGATCGACGTGTGTCCGGAGAACGCTGAAGTCACGCTCACCGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6
CDS TCA 72 bp CCAGGCCAGAATGACTTCATTAGGATGAGGCCAGCCTaGGGCTGGCCTGGAACAGAGTCCCAACTTCATGGA +
Preference number: 6 (lower is better)
Translates to: PGQNDFIRMRPA*GWPGTESQLHG
Trigger: TCCATGAAGTTGGGACTCTGTTCCAGGCCAGCCTCAGGCTGGCCTCATCCTAATGAAGTCATTCTGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612179.1
CDS CAA 72 bp AGCGTGACTTCAGCGTTCTCCGGACACACGTCGATCTaGTCTACCACCTTGTCTGCATCAAAGTCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SVTSAFSGHTSI*STTLSASKSSW
Trigger: CCAGGACGACTTTGATGCAGACAAGGTGGTAGACAAGATCGACGTGTGTCCGGAGAACGCTGAAGTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222271.7
ENST00000425807.1
ENST00000542601.6