Pregenerated sensors for COMMD6 (Homo sapiens)
Ensembl gene IDs: ENSG00000188243Ensembl transcript IDs: ENST00000377612.8, ENST00000377615.7, ENST00000377619.9, ENST00000460675.5, ENST00000464050.5, ENST00000471682.1, ENST00000477377.1, ENST00000626103.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACTGGCATCCAGAGGGTGGGTAATAGAAATGTCTGTGGGTAGTTaGTATGCACAAATGGCCCATCAGCTAACTCATCAAGCTGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: ALASRGWVIEMSVGS*YAQMAHQLTHQAGR Trigger: CCTACCAGCTTGATGAGTTAGCTGATGGGCCATTTGTGCATACCAACTACCCACAGACATTTCTATTACCCACCCTCTGGATGCCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CCA 90 bp | TGCAAACAGGGAAGGGGAAAGAGGAAGGTGTTAATCCGAAGTAAGTaGGAGACAGAGGAACCTCATGCACAGTTACAGAAGGCAGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: CKQGRGKRKVLIRSK*ETEEPHAQLQKAGL Trigger: CAAACCTGCCTTCTGTAACTGTGCATGAGGTTCCTCTGTCTCCCACTTACTTCGGATTAACACCTTCCTCTTTCCCCTTCCCTGTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CCA 90 bp | GGAACACGACGACACTGGTTGTGGGAGGGAGAGAGAAGGGATCTTTaGTTTCTCCTAATTCTAGAATCATTAATGCACTGGCATCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GTRRHWLWEGERRDL*FLLILESLMHWHPE Trigger: CTCTGGATGCCAGTGCATTAATGATTCTAGAATTAGGAGAAACCAAAGATCCCTTCTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR GCA 90 bp | CCACAGTGTTTGAGCCAGGGCCTAACTTTGGGTCTTTTTGCATATTaGCTTAAACCTAGAAATGCTACCCTGCAAACAGGGAAGGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: PQCLSQGLTLGLFAY*LKPRNATLQTGKGK Trigger: TTTCCCCTTCCCTGTTTGCAGGGTAGCATTTCTAGGTTTAAGGCAATATGCAAAAAGACCCAAAGTTAGGCCCTGGCTCAAACACTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR GCA 90 bp | AGTGGGAGACAGAGGAACCTCATGCACAGTTACAGAAGGCAGGTTTaGTGTTTTAACCCAGATAGAGGGGTTTCTACTCTTATTTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: SGRQRNLMHSYRRQV*CFNPDRGVSTLISR Trigger: CCTAGAAATAAGAGTAGAAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCATGAGGTTCCTCTGTCTCCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CCA 90 bp | GAGGGGTTTCTACTCTTATTTCTAGGAACACGACGACACTGGTTGTaGGAGGGAGAGAGAAGGGATCTTTGGTTTCTCCTAATTCTAGAA | + |
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Preference number: 1 (lower is better) Translates to: EGFLLLFLGTRRHWL*EGERRDLWFLLILE Trigger: TTCTAGAATTAGGAGAAACCAAAGATCCCTTCTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCCTAGAAATAAGAGTAGAAACCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CCA 90 bp | CAGATAGAGGGGTTTCTACTCTTATTTCTAGGAACACGACGACACTaGTTGTGGGAGGGAGAGAGAAGGGATCTTTGGTTTCTCCTAATT | + |
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Preference number: 1 (lower is better) Translates to: QIEGFLLLFLGTRRH*LWEGERRDLWFLLI Trigger: AATTAGGAGAAACCAAAGATCCCTTCTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCCTAGAAATAAGAGTAGAAACCCCTCTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CCA 90 bp | GTTTCTCCTAATTCTAGAATCATTAATGCACTGGCATCCAGAGGGTaGGTAATAGAAATGTCTGTGGGTAGTTGGTATGCACAAATGGCC | + |
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Preference number: 1 (lower is better) Translates to: VSPNSRIINALASRG*VIEMSVGSWYAQMA Trigger: GGCCATTTGTGCATACCAACTACCCACAGACATTTCTATTACCCACCCTCTGGATGCCAGTGCATTAATGATTCTAGAATTAGGAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR TCA 90 bp | CATAAATTTGTGCTGCCTCCAACAGCAATGATTCAACTGTTAGTCTaGTTACATCATTCACATTATCACCAAGTATATCCTCTAAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: HKFVLPPTAMIQLLV*LHHSHYHQVYPLKC Trigger: ACACTTTAGAGGATATACTTGGTGATAATGTGAATGATGTAATCAGACTAACAGTTGAATCATTGCTGTTGGAGGCAGCACAAATTTATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTACTCTTATTTCTAGGAACACGACGACACTGGTTGTGGGAGGGAGAGAGAAGCTGGTAGGAATCTaGGCGCACAGGTGGGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: VSTLISRNTTTLVVGGREKLVGI*AHRWAA Trigger: CGCAGCCCACCTGTGCGCTCAGATTCCTACCAGCTT...CTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCCTAGAAATAAGAGTAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR-3UTR GCA 90 bp | CAAATGGCCCATCAGCTAACTCATCAAGCTGGTAGGAATCTGAGCGCACAGGTGCTCCTCACAGCTGTGTaGTACCTAGCAGGGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: QMAHQLTHQAGRNLSAQVLLTAV*YLAGNK Trigger: TTTGTTCCCTGCTAGGTAGCACACAGCTGTGAGGAG...CACCTGTGCGCTCAGATTCCTACCAGCTTGATGAGTTAGCTGATGGGCCATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR-3UTR CCA 90 bp | ATGCACAGTTACAGAAGGCAGGTTTGCTGTTTTAACCCAGATAGAGGGGTTTCTGGAACACGACGACACTaGTTGTGGGAGGGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: MHSYRRQVCCFNPDRGVSGTRRH*LWEGER Trigger: TCTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCC...AGAAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR-3UTR CCA 90 bp | CGAAGTAAGTGGGAGACAGAGGAACCTCATGCACAGTTACAGAAGGCAGGTTTGATGTCTGTGGGTAGTTaGTATGCACAAATGGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: RSKWETEEPHAQLQKAGLMSVGS*YAQMAH Trigger: ATGGGCCATTTGTGCATACCAACTACCCACAGACAT...CAAACCTGCCTTCTGTAACTGTGCATGAGGTTCCTCTGTCTCCCACTTACTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR-3UTR CCA 90 bp | TCATGCACAGTTACAGAAGGCAGGTTTGCTGTTTTAACCCAGATAGAGGGGTTTCTGGCATCCAGAGGGTaGGTAATAGAAATGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SCTVTEGRFAVLTQIEGFLASRG*VIEMSV Trigger: CACAGACATTTCTATTACCCACCCTCTGGATGCCAG...AAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CAA 90 bp | ATAGAGGGGTTTCTACTCTTATTTCTAGGAACACGACGACACTGGTaGTGGGAGGGAGAGAGAAGGGATCTTTGGTTTCTCCTAATTCTA | + |
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Preference number: 2 (lower is better) Translates to: IEGFLLLFLGTRRHW*WEGERRDLWFLLIL Trigger: TAGAATTAGGAGAAACCAAAGATCCCTTCTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCCTAGAAATAAGAGTAGAAACCCCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTACTCTTATTTCTAGGAACACGACGACACTGGTTGTGGGAGGGAGAGAGACATTCACAAAGTTTTaGATTCATCACCACTACCCA | + |
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Preference number: 2 (lower is better) Translates to: VSTLISRNTTTLVVGGRETFTKF*IHHHYP Trigger: TGGGTAGTGGTGATGAATGCAAAACTTTGTGAATGT...CTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCCTAGAAATAAGAGTAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CAA 90 bp | TTATTTCAAATCTGCTACCCACAGTGTTTGAGCCAGGGCCTAACTTaGGGTCTTTTTGCATATTGCCTTAAACCTAGAAATGCTACCCTG | + |
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Preference number: 2 (lower is better) Translates to: LFQICYPQCLSQGLT*GLFAYCLKPRNATL Trigger: CAGGGTAGCATTTCTAGGTTTAAGGCAATATGCAAAAAGACCCAAAGTTAGGCCCTGGCTCAAACACTGTGGGTAGCAGATTTGAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGGGAGAGAGAAGGGATCTTTGGTTTCTCCTAATTCTAGAATCATTAATGTTCCGGTGGTCTATTTaGTTACTTCTAAACAAATGC | + |
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Preference number: 2 (lower is better) Translates to: WEGERRDLWFLLILESLMFRWSI*LLLNKC Trigger: GCATTTGTTTAGAAGTAAGCAAATAGACCACCGGAA...CATTAATGATTCTAGAATTAGGAGAAACCAAAGATCCCTTCTCTCTCCCTCCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGGGAGAGAGAAGGGATCTTTGGTTTCTCCTAATTCTAGAATCATTAATGTTACTTCTAAACAAATaGCATACAATGTGGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: WEGERRDLWFLLILESLMLLLNK*HTMWWL Trigger: AAGCCACCACATTGTATGGCATTTGTTTAGAAGTAA...CATTAATGATTCTAGAATTAGGAGAAACCAAAGATCCCTTCTCTCTCCCTCCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR-3UTR CCA 90 bp | GAATGTCTTGATCTATTTCTAGGCCATCTATTCTATTCCGGTGGTCTATTTGCTAGACTGTTTATAAAATaGGTTCCATCCAGTACAAGT | + |
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Preference number: 2 (lower is better) Translates to: ECLDLFLGHLFYSGGLFARLFIK*VPSSTS Trigger: ACTTGTACTGGATGGAACCCATTTTATAAACAGTCT...AGCAAATAGACCACCGGAATAGAATAGATGGCCTAGAAATAGATCAAGACATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CCA 72 bp | GGAAGGGGAAAGAGGAAGGTGTTAATCCGAAGTAAGTaGGAGACAGAGGAACCTCATGCACAGTTACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GRGKRKVLIRSK*ETEEPHAQLQK Trigger: CTTCTGTAACTGTGCATGAGGTTCCTCTGTCTCCCACTTACTTCGGATTAACACCTTCCTCTTTCCCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CCA 72 bp | GGGTTTCTACTCTTATTTCTAGGAACACGACGACACTaGTTGTGGGAGGGAGAGAGAAGGGATCTTTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: GFLLLFLGTRRH*LWEGERRDLWF Trigger: AAACCAAAGATCCCTTCTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCCTAGAAATAAGAGTAGAAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR GCA 72 bp | TTGAGCCAGGGCCTAACTTTGGGTCTTTTTGCATATTaGCTTAAACCTAGAAATGCTACCCTGCAAACAGGG | + |
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Preference number: 3 (lower is better) Translates to: LSQGLTLGLFAY*LKPRNATLQTG Trigger: CCCTGTTTGCAGGGTAGCATTTCTAGGTTTAAGGCAATATGCAAAAAGACCCAAAGTTAGGCCCTGGCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CCA 72 bp | TCCAGAGGGTGGGTAATAGAAATGTCTGTGGGTAGTTaGTATGCACAAATGGCCCATCAGCTAACTCATCAA | + |
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Preference number: 3 (lower is better) Translates to: SRGWVIEMSVGS*YAQMAHQLTHQ Trigger: TTGATGAGTTAGCTGATGGGCCATTTGTGCATACCAACTACCCACAGACATTTCTATTACCCACCCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CCA 72 bp | AATTCTAGAATCATTAATGCACTGGCATCCAGAGGGTaGGTAATAGAAATGTCTGTGGGTAGTTGGTATGCA | + |
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Preference number: 3 (lower is better) Translates to: NSRIINALASRG*VIEMSVGSWYA Trigger: TGCATACCAACTACCCACAGACATTTCTATTACCCACCCTCTGGATGCCAGTGCATTAATGATTCTAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR GCA 72 bp | CTATTCCGGTGGTCTATTTGCTTACTTCTAAACAAATaGCATACAATGTGGTGGCTTTATAGTATAAAAGCG | + |
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Preference number: 3 (lower is better) Translates to: LFRWSICLLLNK*HTMWWLYSIKA Trigger: CGCTTTTATACTATAAAGCCACCACATTGTATGGCATTTGTTTAGAAGTAAGCAAATAGACCACCGGAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR TCA 90 bp | GTGGGTAGTTGGTATGCACAAATGGCCCATCAGCTAACTCATCAAGCTGGTAGGAAGCTGGTAGGAATCTaGGCGCACAGGTGGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: VGSWYAQMAHQLTHQAGRKLVGI*AHRWAA Trigger: CGCAGCCCACCTGTGCGCTCAGATTCCTACCAGCTT...CCTACCAGCTTGATGAGTTAGCTGATGGGCCATTTGTGCATACCAACTACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR GCA 90 bp | TCATGCACAGTTACAGAAGGCAGGTTTGCTGTTTTAACCCAGATAGAGGGGTTTGCAGCGTCTGGGACTTaGGGCCCGGACTCGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SCTVTEGRFAVLTQIEGFAASGT*GPDSRE Trigger: TTCTCTCGAGTCCGGGCCGCAAGTCCCAGACGCTGC...AAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR TCA 90 bp | CGAAGTAAGTGGGAGACAGAGGAACCTCATGCACAGTTACAGAAGGCAGGTTTGAGATCTGCAAGTGTCTaGGCTCACAGCCATACCCAG | + |
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Preference number: 4 (lower is better) Translates to: RSKWETEEPHAQLQKAGLRSASV*AHSHTQ Trigger: CTGGGTATGGCTGTGAGCTCAGACACTTGCAGATCT...CAAACCTGCCTTCTGTAACTGTGCATGAGGTTCCTCTGTCTCCCACTTACTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | ACAAAGTTTTGCATTCATCACCACTACCCAGTTCCTGTTTGTCTGATTTTTATTCCAGCGGCGGCTCGCTaGACGCCTCCATGGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: TKFCIHHHYPVPVCLIFIPAAAR*TPPWAA Trigger: CGCTGCCCATGGAGGCGTCCAGCGAGCCGCCGCTGG...AATAAAAATCAGACAAACAGGAACTGGGTAGTGGTGATGAATGCAAAACTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR GCA 90 bp | CGAAGTAAGTGGGAGACAGAGGAACCTCATGCACAGTTACAGAAGGCAGGTTTGCTCCTCACAGCTGTGTaGTACCTAGCAGGGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: RSKWETEEPHAQLQKAGLLLTAV*YLAGNK Trigger: TTTGTTCCCTGCTAGGTAGCACACAGCTGTGAGGAG...CAAACCTGCCTTCTGTAACTGTGCATGAGGTTCCTCTGTCTCCCACTTACTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | GAATGTCTTGATCTATTTCTAGGCCATCTATTCTATTCCGGTGGTCTATTTGCTCGCTGGACGCCTCCATaGGCAGCGTCTGGGACTTGC | + |
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Preference number: 4 (lower is better) Translates to: ECLDLFLGHLFYSGGLFARWTPP*AASGTC Trigger: GCAAGTCCCAGACGCTGCCCATGGAGGCGTCCAGCG...AGCAAATAGACCACCGGAATAGAATAGATGGCCTAGAAATAGATCAAGACATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR TCA 90 bp | CAAATGGCCCATCAGCTAACTCATCAAGCTGGTAGGAATCTGAGCGCACAGGTGCGGACCAGAATGTCTTaGTCTATTTCTAGGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: QMAHQLTHQAGRNLSAQVRTRMS*SISRPS Trigger: AGATGGCCTAGAAATAGATCAAGACATTCTGGTCCG...CACCTGTGCGCTCAGATTCCTACCAGCTTGATGAGTTAGCTGATGGGCCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR GCA 90 bp | CGAAGTAAGTGGGAGACAGAGGAACCTCATGCACAGTTACAGAAGGCAGGTTTGCTAGAAATGCTACCCTaGAAACAGGGAAGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: RSKWETEEPHAQLQKAGLLEMLP*KQGRGK Trigger: CTTTCCCCTTCCCTGTTTGCAGGGTAGCATTTCTAG...CAAACCTGCCTTCTGTAACTGTGCATGAGGTTCCTCTGTCTCCCACTTACTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | GAATGTCTTGATCTATTTCTAGGCCATCTATTCTATTCCGGTGGTCTATTTGCTGGCAGGCAGCAGTCCTaGGCTCCTCACAGCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ECLDLFLGHLFYSGGLFAGRQQS*APHSCV Trigger: CACACAGCTGTGAGGAGCCCAGGACTGCTGCCTGCC...AGCAAATAGACCACCGGAATAGAATAGATGGCCTAGAAATAGATCAAGACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | TCATGCACAGTTACAGAAGGCAGGTTTGCTGTTTTAACCCAGATAGAGGGGTTTGGAACACGACGACACTaGTTGTGGGAGGGAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SCTVTEGRFAVLTQIEGFGTRRH*LWEGER Trigger: TCTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCC...AAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | ACAAAGTTTTGCATTCATCACCACTACCCAGTTCCTGTTTGTCTGATTTTTATTTCCATGGGCAGCGTCTaGGACTTGCGGCCCGGACTC | + |
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Preference number: 4 (lower is better) Translates to: TKFCIHHHYPVPVCLIFISMGSV*DLRPGL Trigger: GAGTCCGGGCCGCAAGTCCCAGACGCTGCCCATGGA...AATAAAAATCAGACAAACAGGAACTGGGTAGTGGTGATGAATGCAAAACTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | ATGCACAGTTACAGAAGGCAGGTTTGCTGTTTTAACCCAGATAGAGGGGTTTCTCTGGCATCCAGAGGGTaGGTAATAGAAATGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: MHSYRRQVCCFNPDRGVSLASRG*VIEMSV Trigger: CACAGACATTTCTATTACCCACCCTCTGGATGCCAG...AGAAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | CAAATGGCCCATCAGCTAACTCATCAAGCTGGTAGGAATCTGAGCGCACAGGTGAGACTGTTTATAAAATaGGTTCCATCCAGTACAAGT | + |
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Preference number: 4 (lower is better) Translates to: QMAHQLTHQAGRNLSAQVRLFIK*VPSSTS Trigger: ACTTGTACTGGATGGAACCCATTTTATAAACAGTCT...CACCTGTGCGCTCAGATTCCTACCAGCTTGATGAGTTAGCTGATGGGCCATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | ATGCACAGTTACAGAAGGCAGGTTTGCTGTTTTAACCCAGATAGAGGGGTTTCTATGTCTGTGGGTAGTTaGTATGCACAAATGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: MHSYRRQVCCFNPDRGVSMSVGS*YAQMAH Trigger: ATGGGCCATTTGTGCATACCAACTACCCACAGACAT...AGAAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR GCA 90 bp | GTTTCTACTCTTATTTCTAGGAACACGACGACACTGGTTGTGGGAGGGAGAGAGTTCCGGTGGTCTATTTaGTTACTTCTAAACAAATGC | + |
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Preference number: 4 (lower is better) Translates to: VSTLISRNTTTLVVGGREFRWSI*LLLNKC Trigger: GCATTTGTTTAGAAGTAAGCAAATAGACCACCGGAA...CTCTCTCCCTCCCACAACCAGTGTCGTCGTGTTCCTAGAAATAAGAGTAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CAA 72 bp | ATCTGCTACCCACAGTGTTTGAGCCAGGGCCTAACTTaGGGTCTTTTTGCATATTGCCTTAAACCTAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: ICYPQCLSQGLT*GLFAYCLKPRN Trigger: ATTTCTAGGTTTAAGGCAATATGCAAAAAGACCCAAAGTTAGGCCCTGGCTCAAACACTGTGGGTAGCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | ATGCACAGTTACAGAAGGCAGGTTTGCTGTTTTAACCCAGATAGAGGGGTTTCTGAGAGAAGGGATCTTTaGTTTCTCCTAATTCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: MHSYRRQVCCFNPDRGVSERRDL*FLLILE Trigger: TTCTAGAATTAGGAGAAACCAAAGATCCCTTCTCTC...AGAAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CCA 90 bp | TGGGAGGGAGAGAGAAGGGATCTTTGGTTTCTCCTAATTCTAGAATCATTAATGTTAATCCGAAGTAAGTaGGAGACAGAGGAACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: WEGERRDLWFLLILESLMLIRSK*ETEEPH Trigger: ATGAGGTTCCTCTGTCTCCCACTTACTTCGGATTAA...CATTAATGATTCTAGAATTAGGAGAAACCAAAGATCCCTTCTCTCTCCCTCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR GCA 90 bp | ATGCACAGTTACAGAAGGCAGGTTTGCTGTTTTAACCCAGATAGAGGGGTTTCTTTACTTCTAAACAAATaGCATACAATGTGGTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: MHSYRRQVCCFNPDRGVSLLLNK*HTMWWL Trigger: AAGCCACCACATTGTATGGCATTTGTTTAGAAGTAA...AGAAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR GCA 90 bp | TGGGAGGGAGAGAGAAGGGATCTTTGGTTTCTCCTAATTCTAGAATCATTAATGACATTCACAAAGTTTTaGATTCATCACCACTACCCA | + |
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Preference number: 4 (lower is better) Translates to: WEGERRDLWFLLILESLMTFTKF*IHHHYP Trigger: TGGGTAGTGGTGATGAATGCAAAACTTTGTGAATGT...CATTAATGATTCTAGAATTAGGAGAAACCAAAGATCCCTTCTCTCTCCCTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR GCA 90 bp | GAATGTCTTGATCTATTTCTAGGCCATCTATTCTATTCCGGTGGTCTATTTGCTGGTCTTTTTGCATATTaGCTTAAACCTAGAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: ECLDLFLGHLFYSGGLFAGLFAY*LKPRNA Trigger: AGCATTTCTAGGTTTAAGGCAATATGCAAAAAGACC...AGCAAATAGACCACCGGAATAGAATAGATGGCCTAGAAATAGATCAAGACATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR GCA 90 bp | TTTGCTGTTTTAACCCAGATAGAGGGGTTTCTACTCTTATTTCTAGGAACACGAAATTTATTTCAAATCTaGTACCCACAGTGTTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FAVLTQIEGFLLLFLGTRNLFQI*YPQCLS Trigger: GCTCAAACACTGTGGGTAGCAGATTTGAAATAAATT...TCGTGTTCCTAGAAATAAGAGTAGAAACCCCTCTATCTGGGTTAAAACAGCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| 3UTR CAA 72 bp | CTAATTATCACTTTTATAAAGCACATTCACAAAGTTTaGCATTCATCACCACTACCCAGTTCCTGTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LIITFIKHIHKV*HSSPLPSSCLS Trigger: AGACAAACAGGAACTGGGTAGTGGTGATGAATGCAAAACTTTGTGAATGTGCTTTATAAAAGTGATAATTAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS CCA 90 bp | GGGAAGGCTCAGGGTGGCACGGCCTCGCGGCCGTGGGAGGCAGGCTaGCGGAGGACAGGGCGGGGCGGCCGCTCACCCACCTGGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GKAQGGTASRPWEAG*RRTGRGGRSPTWLV Trigger: CACCAACCAGGTGGGTGAGCGGCCGCCCCGCCCTGTCCTCCGCCAGCCTGCCTCCCACGGCCGCGAGGCCGTGCCACCCTGAGCCTTCCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471682.1 |
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| CDS GCA 90 bp | CCAGCGGCGGCTCGCTGGACGCCTCCATGGGCAGCGTCTGGGACTTaGGGCCCGGACTCGAGAGAACGCCCCCAGACCAGCGCTTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: PAAARWTPPWAASGT*GPDSRERPQTSASA Trigger: AGCGGAAGCGCTGGTCTGGGGGCGTTCTCTCGAGTCCGGGCCGCAAGTCCCAGACGCTGCCCATGGAGGCGTCCAGCGAGCCGCCGCTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377612.8 ENST00000377615.7 |
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| CDS CCA 90 bp | ACGGCTGAAGGTCACCGGCTCGCGGACACAGGACTAGGGGAGACCTaGGGAAGGCTCAGGGTGGCACGGCCTCGCGGCCGTGGGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: TAEGHRLADTGLGET*GRLRVARPRGRGRQ Trigger: CTGCCTCCCACGGCCGCGAGGCCGTGCCACCCTGAGCCTTCCCCAGGTCTCCCCTAGTCCTGTGTCCGCGAGCCGGTGACCTTCAGCCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471682.1 |
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| CDS CCA 90 bp | TTAGCATCCAGCGGCGGCTCGCTGGACGCCTCCATGGGCAGCGTCTaGGACTTGCGGCCCGGACTCGAGAGAACGCCCCCAGACCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: LASSGGSLDASMGSV*DLRPGLERTPPDQR Trigger: GCGCTGGTCTGGGGGCGTTCTCTCGAGTCCGGGCCGCAAGTCCCAGACGCTGCCCATGGAGGCGTCCAGCGAGCCGCCGCTGGATGCTAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377612.8 ENST00000377615.7 |
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| CDS CCA 90 bp | CTACAAGCGTGCTGCACGGCGTCCTCCGGCCTTGCTGCCTGGCAATaGGTAGCCACCTGGCGTCTGTCTCAGAATAGGACTCCGCGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LQACCTASSGLAAWQ*VATWRLSQNRTPRH Trigger: GTGCCGCGGAGTCCTATTCTGAGACAGACGCCAGGTGGCTACCCATTGCCAGGCAGCAAGGCCGGAGGACGCCGTGCAGCACGCTTGTAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460675.5 |
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| CDS TCA 90 bp | ACCGGCTCAGGTGCAAAAGAGAAGGAGCAATGCAAGAGGGACGGCTaGAGGTCACCGGCTCGCGGACACAGGACTAGGGGAGACCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGSGAKEKEQCKRDG*RSPARGHRTRGDLG Trigger: CCCCAGGTCTCCCCTAGTCCTGTGTCCGCGAGCCGGTGACCTTCAGCCGTCCCTCTTGCATTGCTCCTTCTCTTTTGCACCTGAGCCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377619.9 |
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| CDS TCA 90 bp | AGCGGCTCAGGTGCAAAAGAGAAGGAGCAATGCAAGAGGGACGGCTaGAGGTCACCGGCTCGCGGACACAGGACTAGGGGAGACCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGSGAKEKEQCKRDG*RSPARGHRTRGDLG Trigger: CCCCAGGTCTCCCCTAGTCCTGTGTCCGCGAGCCGGTGACCTTCAGCCGTCCCTCTTGCATTGCTCCTTCTCTTTTGCACCTGAGCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471682.1 |
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| CDS CCA 90 bp | GAAAATCTACAAGCGTGCTGCACGGCGTCCTCCGGCCTTGCTGCCTaGCAATGGGTAGCCACCTGGCGTCTGTCTCAGAATAGGACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ENLQACCTASSGLAA*QWVATWRLSQNRTP Trigger: CGGAGTCCTATTCTGAGACAGACGCCAGGTGGCTACCCATTGCCAGGCAGCAAGGCCGGAGGACGCCGTGCAGCACGCTTGTAGATTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460675.5 |
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| CDS GCA 90 bp | GGGAAGAGGAGCTTTCATTACAATGGCAACGGCTACCGGCTCAGGTaGAAAAGAGAAGGAGCAATGCAAGAGGGACGGCTGAAGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GKRSFHYNGNGYRLR*KREGAMQEGRLKVT Trigger: GGTGACCTTCAGCCGTCCCTCTTGCATTGCTCCTTCTCTTTTGCACCTGAGCCGGTAGCCGTTGCCATTGTAATGAAAGCTCCTCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377619.9 |
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| CDS CCA 90 bp | TTCTTCGGGCTAGTGCAGGGTGGGGAAGAGGAGCTTTCATTACAATaGCAACGGCTACCGGCTCAGGTGCAAAAGAGAAGGAGCAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: FFGLVQGGEEELSLQ*QRLPAQVQKRRSNA Trigger: TGCATTGCTCCTTCTCTTTTGCACCTGAGCCGGTAGCCGTTGCCATTGTAATGAAAGCTCCTCTTCCCCACCCTGCACTAGCCCGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377619.9 |
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| CDS CCA 90 bp | AAAGCCCAACAATCCTTGATCTGCATTCTTCGGGCTAGTGCAGGGTaGGGAAGAGGAGCTTTCATTACAATGGCAACGGCTACCGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KAQQSLICILRASAG*GRGAFITMATATGS Trigger: TGAGCCGGTAGCCGTTGCCATTGTAATGAAAGCTCCTCTTCCCCACCCTGCACTAGCCCGAAGAATGCAGATCAAGGATTGTTGGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377619.9 |
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| CDS-3UTR CAA 90 bp | TTTGCTGTTTTAACCCAGATAGAGGGGTTTCTACTCTTATTTCTAGGAACACGAGGCAGCGTCTGGGACTaGCGGCCCGGACTCGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FAVLTQIEGFLLLFLGTRGSVWD*RPGLER Trigger: TCTCTCGAGTCCGGGCCGCAAGTCCCAGACGCTGCC...TCGTGTTCCTAGAAATAAGAGTAGAAACCCCTCTATCTGGGTTAAAACAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS GCA 90 bp | GCTTCGAATAACTGTCGCCTAATCAAAGCCCAACAATCCTTGATCTaGATTCTTCGGGCTAGTGCAGGGTGGGGAAGAGGAGCTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ASNNCRLIKAQQSLI*ILRASAGWGRGAFI Trigger: AATGAAAGCTCCTCTTCCCCACCCTGCACTAGCCCGAAGAATGCAGATCAAGGATTGTTGGGCTTTGATTAGGCGACAGTTATTCGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377619.9 |
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| CDS-3UTR CAA 90 bp | GTGGGTAGTTGGTATGCACAAATGGCCCATCAGCTAACTCATCAAGCTGGTAGGAAATCTACAAGCTGGTaGGTGACATCGGACTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VGSWYAQMAHQLTHQAGRKSTSW*VTSDLA Trigger: TGCTAAGTCCGATGTCACCAACCAGCTTGTAGATTT...CCTACCAGCTTGATGAGTTAGCTGATGGGCCATTTGTGCATACCAACTACCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CAA 90 bp | TGGGAGGGAGAGAGAAGGGATCTTTGGTTTCTCCTAATTCTAGAATCATTAATGACACGACGACACTGGTaGTGGGAGGGAGAGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WEGERRDLWFLLILESLMTRRHW*WEGERR Trigger: CCTTCTCTCTCCCTCCCACAACCAGTGTCGTCGTGT...CATTAATGATTCTAGAATTAGGAGAAACCAAAGATCCCTTCTCTCTCCCTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CAA 90 bp | ATGCACAGTTACAGAAGGCAGGTTTGCTGTTTTAACCCAGATAGAGGGGTTTCTAGAGAGAAGGGATCTTaGGTTTCTCCTAATTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: MHSYRRQVCCFNPDRGVSREKGS*VSPNSR Trigger: TCTAGAATTAGGAGAAACCAAAGATCCCTTCTCTCT...AGAAACCCCTCTATCTGGGTTAAAACAGCAAACCTGCCTTCTGTAACTGTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CAA 90 bp | ACTCGTCTTTCCAACTCTGCGTATGTATTTGAACTTTCTACAACCATTAATAACTGCTACCCACAGTGTTaGAGCCAGGGCCTAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TRLSNSAYVFELSTTINNCYPQC*SQGLTL Trigger: CAAAGTTAGGCCCTGGCTCAAACACTGTGGGTAGCA...GTTATTAATGGTTGTAGAAAGTTCAAATACATACGCAGAGTTGGAAAGACGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS-3UTR CAA 90 bp | ACAAAGTTTTGCATTCATCACCACTACCCAGTTCCTGTTTGTCTGATTTTTATTAGCCAGGGCCTAACTTaGGGTCTTTTTGCATATTGC | + |
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Preference number: 5 (lower is better) Translates to: TKFCIHHHYPVPVCLIFISQGLT*GLFAYC Trigger: GCAATATGCAAAAAGACCCAAAGTTAGGCCCTGGCT...AATAAAAATCAGACAAACAGGAACTGGGTAGTGGTGATGAATGCAAAACTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377615.7 |
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| CDS CCA 72 bp | CTGGGGAAGGCTCAGGGTGGCACGGCCTCGCGGCCGTaGGAGGCAGGCTGGCGGAGGACAGGGCGGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: LGKAQGGTASRP*EAGWRRTGRGG Trigger: GCCGCCCCGCCCTGTCCTCCGCCAGCCTGCCTCCCACGGCCGCGAGGCCGTGCCACCCTGAGCCTTCCCCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471682.1 |
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| CDS CAA 90 bp | TCCAGCGGCGGCTCGCTGGACGCCTCCATGGGCAGCGTCTGGGACTaGCGGCCCGGACTCGAGAGAACGCCCCCAGACCAGCGCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SSGGSLDASMGSVWD*RPGLERTPPDQRFR Trigger: GCGGAAGCGCTGGTCTGGGGGCGTTCTCTCGAGTCCGGGCCGCAAGTCCCAGACGCTGCCCATGGAGGCGTCCAGCGAGCCGCCGCTGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377612.8 ENST00000377615.7 |
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| CDS CCA 72 bp | AGCGGCGGCTCGCTGGACGCCTCCATGGGCAGCGTCTaGGACTTGCGGCCCGGACTCGAGAGAACGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SGGSLDASMGSV*DLRPGLERTPP Trigger: TGGGGGCGTTCTCTCGAGTCCGGGCCGCAAGTCCCAGACGCTGCCCATGGAGGCGTCCAGCGAGCCGCCGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377612.8 ENST00000377615.7 |
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| CDS GCA 72 bp | GCTCGCTGGACGCCTCCATGGGCAGCGTCTGGGACTTaGGGCCCGGACTCGAGAGAACGCCCCCAGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARWTPPWAASGT*GPDSRERPQTS Trigger: GCTGGTCTGGGGGCGTTCTCTCGAGTCCGGGCCGCAAGTCCCAGACGCTGCCCATGGAGGCGTCCAGCGAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377612.8 ENST00000377615.7 |
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| CDS CAA 72 bp | GGCTCGCTGGACGCCTCCATGGGCAGCGTCTGGGACTaGCGGCCCGGACTCGAGAGAACGCCCCCAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: GSLDASMGSVWD*RPGLERTPPDQ Trigger: CTGGTCTGGGGGCGTTCTCTCGAGTCCGGGCCGCAAGTCCCAGACGCTGCCCATGGAGGCGTCCAGCGAGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377612.8 ENST00000377615.7 |
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| CDS GCA 72 bp | TTGGTGACCGTGCTGCACGGCGTCCTCCGGCCTTGCTaGCTGGCAATGGGTAGCCACCTGGCGTCTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LVTVLHGVLRPC*LAMGSHLASVS Trigger: TGAGACAGACGCCAGGTGGCTACCCATTGCCAGGCAGCAAGGCCGGAGGACGCCGTGCAGCACGGTCACCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471682.1 |
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| CDS CCA 72 bp | TCCTCCGGCCTTGCTGCCTGGCAATGGGTAGCCACCTaGCGTCTGTCTCAGAATAGGACTCCGCGGCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGLAAWQWVAT*RLSQNRTPRHA Trigger: GGCGTGCCGCGGAGTCCTATTCTGAGACAGACGCCAGGTGGCTACCCATTGCCAGGCAGCAAGGCCGGAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460675.5 ENST00000471682.1 |
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| CDS GCA 72 bp | TCTACAAGCGTGCTGCACGGCGTCCTCCGGCCTTGCTaGCTGGCAATGGGTAGCCACCTGGCGTCTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: STSVLHGVLRPC*LAMGSHLASVS Trigger: TGAGACAGACGCCAGGTGGCTACCCATTGCCAGGCAGCAAGGCCGGAGGACGCCGTGCAGCACGCTTGTAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460675.5 |
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| CDS CCA 72 bp | CAAGCGTGCTGCACGGCGTCCTCCGGCCTTGCTGCCTaGCAATGGGTAGCCACCTGGCGTCTGTCTCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QACCTASSGLAA*QWVATWRLSQN Trigger: ATTCTGAGACAGACGCCAGGTGGCTACCCATTGCCAGGCAGCAAGGCCGGAGGACGCCGTGCAGCACGCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460675.5 |
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| CDS CCA 72 bp | TGCTGCACGGCGTCCTCCGGCCTTGCTGCCTGGCAATaGGTAGCCACCTGGCGTCTGTCTCAGAATAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: CCTASSGLAAWQ*VATWRLSQNRT Trigger: AGTCCTATTCTGAGACAGACGCCAGGTGGCTACCCATTGCCAGGCAGCAAGGCCGGAGGACGCCGTGCAGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460675.5 ENST00000471682.1 |
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| CDS TCA 72 bp | GGTGCAAAAGAGAAGGAGCAATGCAAGAGGGACGGCTaGAGGTCACCGGCTCGCGGACACAGGACTAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GAKEKEQCKRDG*RSPARGHRTRG Trigger: TCCCCTAGTCCTGTGTCCGCGAGCCGGTGACCTTCAGCCGTCCCTCTTGCATTGCTCCTTCTCTTTTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377619.9 ENST00000471682.1 |
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| CDS CAA 72 bp | CCATACCCAGTTTCCACTGAAAATTCTCCTTCCAGGTaGGAACTCACATCGGACTTAGCATCCAGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PYPVSTENSPSR*ELTSDLASSGG Trigger: GCCGCCGCTGGATGCTAAGTCCGATGTGAGTTCCAACCTGGAAGGAGAATTTTCAGTGGAAACTGGGTATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377612.8 ENST00000626103.1 |
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| CDS CAA 90 bp | TTCCTGGCTTCGAATAACTGTCGCCTAATCAAAGCCCAACAATCCTaGATCTGCATTCTTCGGGCTAGTGCAGGGTGGGGAAGAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FLASNNCRLIKAQQS*ICILRASAGWGRGA Trigger: AGCTCCTCTTCCCCACCCTGCACTAGCCCGAAGAATGCAGATCAAGGATTGTTGGGCTTTGATTAGGCGACAGTTATTCGAAGCCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377619.9 |
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| CDS GCA 72 bp | AACTGTCGCCTAATCAAAGCCCAACAATCCTTGATCTaGATTCTTCGGGCTAGTGCAGGGTGGGGAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: NCRLIKAQQSLI*ILRASAGWGRG Trigger: TCCTCTTCCCCACCCTGCACTAGCCCGAAGAATGCAGATCAAGGATTGTTGGGCTTTGATTAGGCGACAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377619.9 |
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| CDS CCA 72 bp | CAATCCTTGATCTGCATTCTTCGGGCTAGTGCAGGGTaGGGAAGAGGAGCTTTCATTACAATGGCAACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QSLICILRASAG*GRGAFITMATA Trigger: AGCCGTTGCCATTGTAATGAAAGCTCCTCTTCCCCACCCTGCACTAGCCCGAAGAATGCAGATCAAGGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377619.9 |
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| CDS CAA 72 bp | TCGAATAACTGTCGCCTAATCAAAGCCCAACAATCCTaGATCTGCATTCTTCGGGCTAGTGCAGGGTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SNNCRLIKAQQS*ICILRASAGWG Trigger: TCCCCACCCTGCACTAGCCCGAAGAATGCAGATCAAGGATTGTTGGGCTTTGATTAGGCGACAGTTATTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377619.9 |
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| CDS CCA 72 bp | ATATACTCAGAGAGGAGTACTGTTCAAGCGATCAAATaGCGCAGTACACAACTTCAGCACATTATATTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: IYSERSTVQAIK*RSTQLQHIILK Trigger: TTTCAATATAATGTGCTGAAGTTGTGTACTGCGCCATTTGATCGCTTGAACAGTACTCCTCTCTGAGTATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464050.5 ENST00000477377.1 |
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