Pregenerated sensors for COMMD3 (Homo sapiens)
Ensembl gene IDs: ENSG00000148444Ensembl transcript IDs: ENST00000376836.8, ENST00000444869.5, ENST00000448361.5, ENST00000456711.5, ENST00000463688.6, ENST00000468179.6, ENST00000468469.5, ENST00000470045.1, ENST00000472610.5, ENST00000479958.6, ENST00000483684.1, ENST00000496071.5, ENST00000602574.5
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCTACTGAAAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTaGAGGCAAGGCGTTTCTGGTTTTCCTCTGCACTCGGGCGGATCG | + |
|
Preference number: 1 (lower is better) Translates to: FLLKRTSSSHKRWFS*RQGVSGFPLHSGGS Trigger: CGATCCGCCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAAGCGCCAAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCCGACTTGTCAGCTCGGTaGTTTCCTGCCTCTAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: FQAPRNIRYMRERSAYTSDLSAR*FPASSM Trigger: CATACTAGAGGCAGGAAAGCACCGAGCTGACAAGTC...GGAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| 3UTR CAA 90 bp | GAGTTGACTTGTCAGCTCGGTGCTTTCCTGCCTCTAGTATGTAAGTaGCAGCTGCTGCATGACAATGTTTTAAAACCACTGGGTCGATAT | + |
|
Preference number: 2 (lower is better) Translates to: ELTCQLGAFLPLVCK*QLLHDNVLKPLGRY Trigger: ATATCGACCCAGTGGTTTTAAAACATTGTCATGCAGCAGCTGCAACTTACATACTAGAGGCAGGAAAGCACCGAGCTGACAAGTCAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| 3UTR-3UTR TCA 90 bp | GGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACAAACGGTGGTTCAGCTaGAGGCAAGGCGTTTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GQLLLNDSNTWAVSFPLNKRWFS*RQGVSG Trigger: ACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTT...GTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTAAACGGTGGTTCAGCTaGAGGCAAGGCGTTTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: QLLLNDSNTWAVSFPLNPKRWFS*RQGVSG Trigger: ACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTT...AGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| 3UTR-3UTR TCA 90 bp | TTATCTGATATTCCAAGCGCCAAGAAACATCCGTTATATGAGGGAGAGATCTGCGTTGCAGCTGCTGCATaGCAATGTTTTAAAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: LSDIPSAKKHPLYEGEICVAAAA*QCFKTT Trigger: AGTGGTTTTAAAACATTGTCATGCAGCAGCTGCAAC...GCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTGGAATATCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGAAAACAACACCTTATTTATTCAGGGTGTAATACTGTCTACTTCCTTTCAAAGGCAAGGCGTTTCTaGTTTTCCTCTGCACTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: CGKQHLIYSGCNTVYFLSKARRF*FSSALG Trigger: CCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTT...TGAAAGGAAGTAGACAGTATTACACCCTGAATAAATAAGGTGTTGTTTTCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000448361.5 |
||
| 3UTR CCA 72 bp | GCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTaGTTTTCCTCTGCACTCGGGCGGATCGTTAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: AQTVVQLKARRF*FSSALGRIVNF Trigger: GAAGTTAACGATCCGCCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGCGCCAAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCCCAGATAAGTGCTTAGAGTaGACTTGTCAGCTCGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSAKKHPLYEGEICLYFPDKCLE*TCQLGA Trigger: AGCACCGAGCTGACAAGTCAACTCTAAGCACTTATC...TGGGAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGTCAAATTTACAGTCTTCTAGATAAGTGCTTAGAGTTGACTTGTCAGCTCCCTCTAGTATGTAAGTaGCAGCTGCTGCATGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: LCQIYSLLDKCLELTCQLPLVCK*QLLHDN Trigger: ATTGTCATGCAGCAGCTGCAACTTACATACTAGAGG...GAGCTGACAAGTCAACTCTAAGCACTTATCTAGAAGACTGTAAATTTGACAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGGAAAACAACACCTTATTTATTCAGGGTGTAATACTGTCTACTTCCTTTCAGAAACGATTCAAATACTaGGGCAGTATCTTTCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VENNTLFIQGVILSTSFQKRFKY*GSIFPS Trigger: AGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTT...CTGAAAGGAAGTAGACAGTATTACACCCTGAATAAATAAGGTGTTGTTTTCCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000448361.5 |
||
| CDS-3UTR CCA 90 bp | GGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCACTCGGGCGGATCGTACGGCCTCGTCCGCCTaGGCGTCCAGCAGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSAEGKAFLVFLCTRADRTASSA*ASSRLW Trigger: CCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCCGT...ACGATCCGCCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | CAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCACTCGGGACGGCCTCGTCCGCCTaGGCGTCCAGCAGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTVVQLKARRFWFSSALGTASSA*ASSRLW Trigger: CCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCCGT...CCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | CTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCACCGAGAGCTCCATTGTaGGCGCGCCGTGACCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LAQTVVQLKARRFWFSSAPRAPL*ARRDLR Trigger: TCGAAGGTCACGGCGCGCTCACAATGGAGCTCTCGG...TGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376836.8 |
||
| CDS-3UTR TCA 90 bp | CTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCACCCGGAGGAGAAGCGTaGAGGCGTTGGAGTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQTVVQLKARRFWFSSAPGGEA*RRWSRR Trigger: CCTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGG...TGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | TCTACTGAAAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCCCGGAGGAGAAGCGTaGAGGCGTTGGAGTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: STEKDIQLAQTVVQLKARPGGEA*RRWSRR Trigger: CCTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGG...CCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | CAAGCGCCAAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCCCAGACGGCCTCGTCCGCCTaGGCGTCCAGCAGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAPRNIRYMRERSAYTSQTASSA*ASSRLW Trigger: CCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCCGT...CTGGGAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS-3UTR GCA 90 bp | TCTACTGAAAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCAGCAGACTCTGGAATaGCGCCCGGAGGAGAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: STEKDIQLAQTVVQLKARQQTLE*RPEEKR Trigger: ACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTG...CCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | AAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGGATCCGCCAGCATCTaGAAGCCTTTCTGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KGHPARTNGGSAEGKAFLGSASI*KPFCTD Trigger: GTCTGTGCAGAAAGGCTTCCAGATGCTGGCGGATCC...CAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | CTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCAATCTGGAAGCCTTTCTaGACAGACTCCGAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAQTVVQLKARRFWFSSAIWKPF*TDSESS Trigger: GGAGCTCTCGGAGTCTGTGCAGAAAGGCTTCCAGAT...TGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | CTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCAAAGGCAAGGCGTTTCTaGTTTTCCTCTGCACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQTVVQLKARRFWFSSAKARRF*FSSALG Trigger: CCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTT...TGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | TCTACTGAAAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGAAACGGTGGTTCAGCTaGAGGCAAGGCGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STEKDIQLAQTVVQLKARKRWFS*RQGVSG Trigger: ACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTT...CCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | GGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACACGGCCTCGTCCGCCTaGGCGTCCAGCAGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQLLLNDSNTWAVSFPLNTASSA*ASSRLW Trigger: CCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCCGT...GTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | GGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCACTCGGGCGGATCGTAATCTCTGGATAGGATaGGGAATCAGTGTTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSAEGKAFLVFLCTRADRNLWIG*GISVLY Trigger: GTACAGAACACTGATTCCCCATCCTATCCAGAGATT...ACGATCCGCCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | TTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACGGCCTCGTCCGCCTaGGCGTCCAGCAGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLNDSNTWAVSFPLNPFTASSA*ASSRLW Trigger: CCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCCGT...GAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | CAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTCCCGGAGGAGAAGCGTaGAGGCGTTGGAGTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLLNDSNTWAVSFPLNPPGGEA*RRWSRR Trigger: CCTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGG...AGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | CATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCGTTGCAGCTGCTGCATaGCAATGTTTTAAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: HPARTNGGSAEGKAFLVFVAAAA*QCFKTT Trigger: AGTGGTTTTAAAACATTGTCATGCAGCAGCTGCAAC...GAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGAAACATCCGTTATATaGGGGAGAGATCTGCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: KGHPARTNGGSAEGKAFLETSVI*GRDLPI Trigger: TATAGGCAGATCTCTCCCTCATATAACGGATGTTTC...CAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTCTACTGAAAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGAAACGGTGGTTCAGCTaGAGGCAAGGCGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFSTEKDIQLAQTVVQLKKRWFS*RQGVSG Trigger: ACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTT...CTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | CCAAGCGCCAAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCCCAGACTTGTCAGCTCGGTaGTTTCCTGCCTCTAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PSAKKHPLYEGEICLYFPDLSAR*FPASSM Trigger: CATACTAGAGGCAGGAAAGCACCGAGCTGACAAGTC...TGGGAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS-3UTR GCA 90 bp | TCTACTGAAAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGTATGAGGGAGAGATCTaGCTATACTTCCCAGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: STEKDIQLAQTVVQLKARYEGEI*LYFPVG Trigger: TCCTACTGGGAAGTATAGGCAGATCTCTCCCTCATA...CCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000448361.5 |
||
| CDS-3UTR CCA 90 bp | CTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCAAAAGCGTCCAGCAGACTCTaGAATGCCGCCCGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGQYLSLLTLSHVFKVSKASSRL*NAARRR Trigger: TCTCCTCCGGGCGGCATTCCAGAGTCTGCTGGACGC...TTTTGACACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | AAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGAATCTCTGGATAGGATaGGGAATCAGTGTTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KGHPARTNGGSAEGKAFLNLWIG*GISVLY Trigger: GTACAGAACACTGATTCCCCATCCTATCCAGAGATT...CAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | GGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCAAAATTGCAGCAGACTCTGGAATaGCGCCCGGAGGAGAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GQYLSLLTLSHVFKVSKLQQTLE*RPEEKR Trigger: ACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTG...CAATTTTGACACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | AAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGAAGTTACAACTGAGTTaGTCTTTCCAGGCTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KGHPARTNGGSAEGKAFLKLQLS*SFQAFR Trigger: TCGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTT...CAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | AAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGTATGAGGGAGAGATCTaGCTATACTTAGAGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KGHPARTNGGSAEGKAFLYEGEI*LYLELT Trigger: AGTCAACTCTAAGTATAGGCAGATCTCTCCCTCATA...CAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | ATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAACCCGGAGGAGAAGCGTaGAGGCGTTGGAGTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQILGQYLSLLTLSHVFKPGGEA*RRWSRR Trigger: CCTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGG...TTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | CAACACCTTATTTATTCAGGGTGTAATACTGTCTACTTCCTTTCAGAAGACTTGCAGCAGACTCTGGAATaGCGCCCGGAGGAGAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QHLIYSGCNTVYFLSEDLQQTLE*RPEEKR Trigger: ACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTG...CAAGTCTTCTGAAAGGAAGTAGACAGTATTACACCCTGAATAAATAAGGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000448361.5 |
||
| CDS-3UTR CCA 90 bp | AAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCCCAGTAGGATTTGGATCCGCCAGCATCTaGAAGCCTTTCTGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KKHPLYEGEICLYFPVGFGSASI*KPFCTD Trigger: GTCTGTGCAGAAAGGCTTCCAGATGCTGGCGGATCC...AAATCCTACTGGGAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS-3UTR TCA 90 bp | CAAGCGCCAAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCCCAGGTTGCAGCTGCTGCATaGCAATGTTTTAAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: QAPRNIRYMRERSAYTSQVAAAA*QCFKTT Trigger: AGTGGTTTTAAAACATTGTCATGCAGCAGCTGCAAC...CTGGGAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS-3UTR TCA 90 bp | CAAGCGCCAAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCCCAGGAAACATCCGTTATATaGGGGAGAGATCTGCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: QAPRNIRYMRERSAYTSQETSVI*GRDLPI Trigger: TATAGGCAGATCTCTCCCTCATATAACGGATGTTTC...CTGGGAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS-3UTR CCA 90 bp | CAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGGGATCCGCCAGCATCTaGAAGCCTTTCTGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QILGQYLSLLTLSHVFKVGSASI*KPFCTD Trigger: GTCTGTGCAGAAAGGCTTCCAGATGCTGGCGGATCC...CACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | CAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGAAACGGTGGTTCAGCTaGAGGCAAGGCGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QILGQYLSLLTLSHVFKVKRWFS*RQGVSG Trigger: ACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTT...CACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | GGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCAAAATTGATCTGGAAGCCTTTCTaGACAGACTCCGAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQYLSLLTLSHVFKVSKLIWKPF*TDSESS Trigger: GGAGCTCTCGGAGTCTGTGCAGAAAGGCTTCCAGAT...CAATTTTGACACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | TTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCGGATCCGCCAGCATCTaGAAGCCTTTCTGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLNDSNTWAVSFPLNPFGSASI*KPFCTD Trigger: GTCTGTGCAGAAAGGCTTCCAGATGCTGGCGGATCC...GAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | CTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCAAAAAAGGCAAGGCGTTTCTaGTTTTCCTCTGCACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQYLSLLTLSHVFKVSKKARRF*FSSALG Trigger: CCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTT...TTTTGACACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | GGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCAAAATTGAAGGCAAGGCGTTTCTaGTTTTCCTCTGCACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQYLSLLTLSHVFKVSKLKARRF*FSSALG Trigger: CCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTT...CAATTTTGACACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | AACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTAAGGCAAGGCGTTTCTaGTTTTCCTCTGCACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NDSNTWAVSFPLNPFTRFKARRF*FSSALG Trigger: CCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTT...AAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | AACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTGACTTGTCAGCTCGGTaGTTTCCTGCCTCTAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: NDSNTWAVSFPLNPFTRFDLSAR*FPASSM Trigger: CATACTAGAGGCAGGAAAGCACCGAGCTGACAAGTC...AAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | CAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCCCCAAGTTACAACTaGGTTGCTCTTTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QILGQYLSLLTLSHVFKVSPSYN*VALSRL Trigger: AAGCCTGGAAAGAGCAACTCAGTTGTAACTTGGGGA...CACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | GTGGAAAACAACACCTTATTTATTCAGGGTGTAATACTGTCTACTTCCTTTCAGGACTTGTCAGCTCGGTaGTTTCCTGCCTCTAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: VENNTLFIQGVILSTSFQDLSAR*FPASSM Trigger: CATACTAGAGGCAGGAAAGCACCGAGCTGACAAGTC...CTGAAAGGAAGTAGACAGTATTACACCCTGAATAAATAAGGTGTTGTTTTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376836.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCATGACAATGTTTTAAAACCACTGGGTCGATATGTTTCAAGTCTGGATTATGAGGGAGAGATCTaGCTATACTTCCCAGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHDNVLKPLGRYVSSLDYEGEI*LYFPVG Trigger: TCCTACTGGGAAGTATAGGCAGATCTCTCCCTCATA...ATCCAGACTTGAAACATATCGACCCAGTGGTTTTAAAACATTGTCATGCAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS-3UTR TCA 90 bp | AAATGGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTCCCCAAGTTACAACTaGGTTGCTCTTTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KWTVTTKRFKYLGSIFPSSPSYN*VALSRL Trigger: AAGCCTGGAAAGAGCAACTCAGTTGTAACTTGGGGA...AGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | AATGGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTTCCCCAAGTTACAACTaGGTTGCTCTTTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NGQLLLNDSNTWAVSFPLSPSYN*VALSRL Trigger: AAGCCTGGAAAGAGCAACTCAGTTGTAACTTGGGGA...AAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | AACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTAATCTCTGGATAGGATaGGGAATCAGTGTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NDSNTWAVSFPLNPFTRFNLWIG*GISVLP Trigger: GGGAAGAACACTGATTCCCCATCCTATCCAGAGATT...AAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444869.5 |
||
| CDS-3UTR TCA 90 bp | GGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCAAAATTGGTTGCAGCTGCTGCATaGCAATGTTTTAAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: GQYLSLLTLSHVFKVSKLVAAAA*QCFKTT Trigger: AGTGGTTTTAAAACATTGTCATGCAGCAGCTGCAAC...CAATTTTGACACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | CAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTGTTGCAGCTGCTGCATaGCAATGTTTTAAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: QLLLNDSNTWAVSFPLNPVAAAA*QCFKTT Trigger: AGTGGTTTTAAAACATTGTCATGCAGCAGCTGCAAC...AGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | GTGGAAAACAACACCTTATTTATTCAGGGTGTAATACTGTCTACTTCCTTTCAGTATGAGGGAGAGATCTaGCTATACTTCCCAGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VENNTLFIQGVILSTSFQYEGEI*LYFPVG Trigger: TCCTACTGGGAAGTATAGGCAGATCTCTCCCTCATA...CTGAAAGGAAGTAGACAGTATTACACCCTGAATAAATAAGGTGTTGTTTTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000448361.5 |
||
| CDS-3UTR TCA 90 bp | CAACACCTTATTTATTCAGGGTGTAATACTGTCTACTTCCTTTCAGAAGACTTGGAAACATCCGTTATATaGGGGAGAGATCTGCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: QHLIYSGCNTVYFLSEDLETSVI*GRDLPI Trigger: TATAGGCAGATCTCTCCCTCATATAACGGATGTTTC...CAAGTCTTCTGAAAGGAAGTAGACAGTATTACACCCTGAATAAATAAGGTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000448361.5 |
||
| CDS-3UTR GCA 90 bp | CTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCAAAAAAGTTACAACTGAGTTaGTCTTTCCAGGCTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGQYLSLLTLSHVFKVSKKLQLS*SFQAFR Trigger: TCGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTT...TTTTGACACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | GGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACAAGTTACAACTGAGTTaGTCTTTCCAGGCTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GQLLLNDSNTWAVSFPLNKLQLS*SFQAFR Trigger: TCGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTT...GTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | GGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCAAAATTGAAGTTACAACTGAGTTaGTCTTTCCAGGCTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GQYLSLLTLSHVFKVSKLKLQLS*SFQAFR Trigger: TCGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTT...CAATTTTGACACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | TTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCAATCTCTGGATAGGATaGGGAATCAGTGTTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLNDSNTWAVSFPLNPFNLWIG*GISVLY Trigger: GTACAGAACACTGATTCCCCATCCTATCCAGAGATT...GAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR TCA 90 bp | ATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGAAACATCCGTTATATaGGGGAGAGATCTGCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: IQILGQYLSLLTLSHVFKETSVI*GRDLPI Trigger: TATAGGCAGATCTCTCCCTCATATAACGGATGTTTC...TTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | AACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTACTAAAACTAATCTCTaGATAGGATGGGGAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NDSNTWAVSFPLNPFTRFTKTNL*IGWGIS Trigger: ACTGATTCCCCATCCTATCCAGAGATTAGTTTTAGT...AAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | GGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACTATTCTGATATTCCGTaGAAAACAGTTCTATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLLLNDSNTWAVSFPLNYSDIP*KTVLFA Trigger: AGCGAATAGAACTGTTTTGCACGGAATATCAGAATA...GTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 |
||
| CDS-3UTR GCA 90 bp | CAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTATTCTGATATTCCGTaGAAAACAGTTCTATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLLNDSNTWAVSFPLNPYSDIP*KTVLFA Trigger: AGCGAATAGAACTGTTTTGCACGGAATATCAGAATA...AGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 |
||
| CDS-3UTR GCA 90 bp | CTCTGTCAAATTTACAGTCTTCTAGATAAGTGCTTAGAGTTGACTTGTCAGCTCTATTCTGATATTCCGTaGAAAACAGTTCTATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCQIYSLLDKCLELTCQLYSDIP*KTVLFA Trigger: AGCGAATAGAACTGTTTTGCACGGAATATCAGAATA...GAGCTGACAAGTCAACTCTAAGCACTTATCTAGAAGACTGTAAATTTGACAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS-3UTR CCA 90 bp | AAATGGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTACTAAAACTAATCTCTaGATAGGATGGGGAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWTVTTKRFKYLGSIFPSTKTNL*IGWGIS Trigger: ACTGATTCCCCATCCTATCCAGAGATTAGTTTTAGT...AGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCCATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CCA 90 bp | ATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAACTAAAACTAATCTCTaGATAGGATGGGGAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IQILGQYLSLLTLSHVFKTKTNL*IGWGIS Trigger: ACTGATTCCCCATCCTATCCAGAGATTAGTTTTAGT...TTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR GCA 90 bp | ATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAATATTCTGATATTCCGTaGAAAACAGTTCTATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQILGQYLSLLTLSHVFKYSDIP*KTVLFA Trigger: AGCGAATAGAACTGTTTTGCACGGAATATCAGAATA...TTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 |
||
| CDS TCA 90 bp | CCTGGGCGTCCAGCAGACTCTGGAATGCCGCCCGGAGGAGAAGCGTaGAGGCGTTGGAGTCGAAGGAGCGGGGATCCGCCAGCATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGRPADSGMPPGGEA*RRWSRRSGDPPASG Trigger: TCCAGATGCTGGCGGATCCCCGCTCCTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTGGACGCCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000472610.5 ENST00000479958.6 ENST00000496071.5 ENST00000602574.5 |
||
| CDS CCA 90 bp | GTGATGCCTAACACGGCCTCGTCCGCCTGGGCGTCCAGCAGACTCTaGAATGCCGCCCGGAGGAGAAGCGTGAAGGCGTTGGAGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VMPNTASSAWASSRL*NAARRRSVKALESK Trigger: CTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCCGTGTTAGGCATCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS CCA 90 bp | ATAAGTGCTAACACGGCCTCGTCCGCCTGGGCGTCCAGCAGACTCTaGAATGCCGCCCGGAGGAGAAGCGTGAAGGCGTTGGAGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISANTASSAWASSRL*NAARRRSVKALESK Trigger: CTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCCGTGTTAGCACTTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448361.5 |
||
| CDS CCA 90 bp | AGCGTGAAGGCGTTGGAGTCGAAGGAGCGGGGATCCGCCAGCATCTaGAAGCCTTTCTGCACAGACTCCGAGAGCTCCATTGTGAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SVKALESKERGSASI*KPFCTDSESSIVSA Trigger: CGCGCTCACAATGGAGCTCTCGGAGTCTGTGCAGAAAGGCTTCCAGATGCTGGCGGATCCCCGCTCCTTCGACTCCAACGCCTTCACGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000468179.6 ENST00000602574.5 |
||
| CDS-3UTR CAA 90 bp | CTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCAAGAAGCGTGAAGGCGTaGGAGTCGAAGGAGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAQTVVQLKARRFWFSSARSVKA*ESKERG Trigger: TCCCCGCTCCTTCGACTCCAACGCCTTCACGCTTCT...TGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS CCA 90 bp | ATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTaGTTTTCCTCTGCACTCGGGCGGATCGTTAACTTCCCCAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: IQLAQTVVQLKARRF*FSSALGRIVNFPKL Trigger: TAACTTGGGGAAGTTAACGATCCGCCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 ENST00000463688.6 ENST00000479958.6 ENST00000483684.1 ENST00000496071.5 ENST00000602574.5 |
||
| CDS-3UTR CAA 90 bp | GGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCACTCGGGCGGATCGTCAAGTTACAACTGAGTaGCTCTTTCCAGGCTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GSAEGKAFLVFLCTRADRQVTTE*LFPGFS Trigger: CGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTTG...ACGATCCGCCCGAGTGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CAA 90 bp | CTCGCACAAACGGTGGTTCAGCTGAAGGCAAGGCGTTTCTGGTTTTCCTCTGCACAAGTTACAACTGAGTaGCTCTTTCCAGGCTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LAQTVVQLKARRFWFSSAQVTTE*LFPGFS Trigger: CGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTTG...TGCAGAGGAAAACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CAA 90 bp | AAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCCCAGTAGGATTTAGAAGCGTGAAGGCGTaGGAGTCGAAGGAGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKHPLYEGEICLYFPVGFRSVKA*ESKERG Trigger: TCCCCGCTCCTTCGACTCCAACGCCTTCACGCTTCT...AAATCCTACTGGGAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS TCA 90 bp | TTTCCTCTGCACTCGGGCGGATCGTTAACTTCCCCAAGTTACAACTaGGTTGCTCTTTCCAGGCTTTTCGAAGCATCTTTAAGTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FPLHSGGSLTSPSYN*VALSRLFEASLSFP Trigger: GGGGAAACTTAAAGATGCTTCGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTTGGGGAAGTTAACGATCCGCCCGAGTGCAGAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 ENST00000463688.6 ENST00000479958.6 ENST00000483684.1 ENST00000496071.5 ENST00000602574.5 |
||
| CDS-3UTR CAA 90 bp | GGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACAGAAGCGTGAAGGCGTaGGAGTCGAAGGAGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GQLLLNDSNTWAVSFPLNRSVKA*ESKERG Trigger: TCCCCGCTCCTTCGACTCCAACGCCTTCACGCTTCT...GTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CAA 90 bp | CAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGAGAAGCGTGAAGGCGTaGGAGTCGAAGGAGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QILGQYLSLLTLSHVFKVRSVKA*ESKERG Trigger: TCCCCGCTCCTTCGACTCCAACGCCTTCACGCTTCT...CACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTCTACTGAAAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGTGCTTAGAGTTGACTaGTCAGCTCGGTGCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FFSTEKDIQLAQTVVQLKVLRVD*SARCFP Trigger: AGGAAAGCACCGAGCTGACAAGTCAACTCTAAGCAC...CTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGAAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376836.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCAAGCGCCAAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCGTGCTTAGAGTTGACTaGTCAGCTCGGTGCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IPSAKKHPLYEGEICLYFVLRVD*SARCFP Trigger: AGGAAAGCACCGAGCTGACAAGTCAACTCTAAGCAC...GAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGAAAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAATACTTAGAGTTGACTaGTCAGCTCGGTGCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSTEKDIQLAQTVVQLKAILRVD*SARCFP Trigger: AGGAAAGCACCGAGCTGACAAGTCAACTCTAAGTAT...TGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456711.5 |
||
| CDS TCA 90 bp | CGAAGATCTTGTTTCACACCAACACTCTCCATTCATACCTGCAAGTaGAAAGTGCCTCAGCTTGACACCTTATACAGTACCTACCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRSCFTPTLSIHTCK*KVPQLDTLYSTYLP Trigger: GGGAAGGTAGGTACTGTATAAGGTGTCAAGCTGAGGCACTTTTCACTTGCAGGTATGAATGGAGAGTGTTGGTGTGAAACAAGATCTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000479958.6 ENST00000602574.5 |
||
| CDS GCA 90 bp | CTTGTTTCACACCAACACTCTCCATTCATACCTGCAAGTGAAAAGTaGCTCAGCTTGACACCTTATACAGTACCTACCTTCCCAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVSHQHSPFIPASEK*LSLTPYTVPTFPVG Trigger: TCCTACTGGGAAGGTAGGTACTGTATAAGGTGTCAAGCTGAGGCACTTTTCACTTGCAGGTATGAATGGAGAGTGTTGGTGTGAAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000479958.6 ENST00000602574.5 |
||
| CDS-3UTR CAA 90 bp | ATTCCAAGCGCCAAGAAACATCCGTTATATGAGGGAGAGATCTGCCTATACTTCGATAAGTGCTTAGAGTaGACTTGTCAGCTCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPSAKKHPLYEGEICLYFDKCLE*TCQLGA Trigger: AGCACCGAGCTGACAAGTCAACTCTAAGCACTTATC...GAAGTATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472610.5 |
||
| CDS CCA 90 bp | GAGCTTAACTTCAATTGCTTGACATGCCCTTTGGCTCCTTTTCTTTaGGTCAAGATCCCGAAGATCTTGTTTCACACCAACACTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ELNFNCLTCPLAPFL*VKIPKILFHTNTLH Trigger: ATGGAGAGTGTTGGTGTGAAACAAGATCTTCGGGATCTTGACCCAAAGAAAAGGAGCCAAAGGGCATGTCAAGCAATTGAAGTTAAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000463688.6 ENST00000468179.6 ENST00000479958.6 ENST00000496071.5 ENST00000602574.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGAAAAGGACATCCAGCTCGCACAAACGGTGGTTCAGCTGAAGGCAAAACGATTCAAATACTaGGGCAGTATCTTTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSTEKDIQLAQTVVQLKAKRFKY*GSIFPS Trigger: AGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTT...TGCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CAA 90 bp | CTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGTCAAAAGTGCTTAGAGTTGACTaGTCAGCTCGGTGCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGQYLSLLTLSHVFKVSKVLRVD*SARCFP Trigger: AGGAAAGCACCGAGCTGACAAGTCAACTCTAAGCAC...TTTTGACACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000444869.5 |
||
| CDS-3UTR CAA 90 bp | AACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTGATAAGTGCTTAGAGTaGACTTGTCAGCTCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NDSNTWAVSFPLNPFTRFDKCLE*TCQLGA Trigger: AGCACCGAGCTGACAAGTCAACTCTAAGCACTTATC...AAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000444869.5 |
||
| CDS-3UTR CAA 90 bp | GGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACGATAAGTGCTTAGAGTaGACTTGTCAGCTCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GQLLLNDSNTWAVSFPLNDKCLE*TCQLGA Trigger: AGCACCGAGCTGACAAGTCAACTCTAAGCACTTATC...GTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000444869.5 |
||
| CDS-3UTR CAA 90 bp | AACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTCAAGTTACAACTGAGTaGCTCTTTCCAGGCTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: NDSNTWAVSFPLNPFTRFQVTTE*LFPGFS Trigger: CGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTTG...AAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CAA 90 bp | AATGGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTTGCCTATACTTAGAGTaGACTTGTCAGCTCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NGQLLLNDSNTWAVSFPLCLYLE*TCQLGA Trigger: AGCACCGAGCTGACAAGTCAACTCTAAGTATAGGCA...AAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456711.5 |
||
| CDS-3UTR CAA 90 bp | CAACACCTTATTTATTCAGGGTGTAATACTGTCTACTTCCTTTCAGAAGACTTGCAAGTTACAACTGAGTaGCTCTTTCCAGGCTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QHLIYSGCNTVYFLSEDLQVTTE*LFPGFS Trigger: CGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTTG...CAAGTCTTCTGAAAGGAAGTAGACAGTATTACACCCTGAATAAATAAGGTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376836.8 ENST00000448361.5 |
||
| CDS TCA 90 bp | AAATACCTCATGTTCAAATCGGTTATTTGCCCTCACACTGAAACATaGTTTCTAACCGGATCCTTAACCGCCCAGATACATCTGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: KYLMFKSVICPHTET*FLTGSLTAQIHLNF Trigger: AAAATTCAGATGTATCTGGGCGGTTAAGGATCCGGTTAGAAATCATGTTTCAGTGTGAGGGCAAATAACCGATTTGAACATGAGGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602574.5 |
||
| CDS-3UTR CAA 90 bp | TGTGGAAAACAACACCTTATTTATTCAGGGTGTAATACTGTCTACTTCCTTTCACCTCTAGTATGTAAGTaGCAGCTGCTGCATGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: CGKQHLIYSGCNTVYFLSPLVCK*QLLHDN Trigger: ATTGTCATGCAGCAGCTGCAACTTACATACTAGAGG...TGAAAGGAAGTAGACAGTATTACACCCTGAATAAATAAGGTGTTGTTTTCCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376836.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTAAACGATTCAAATACTaGGGCAGTATCTTTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLLLNDSNTWAVSFPLNPKRFKY*GSIFPS Trigger: AGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTT...AGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CAA 90 bp | CAAATACTTGGGCAGTATCTTTCCCTCTTAACCCTTTCACACGTTTTTAAAGTGAAACGATTCAAATACTaGGGCAGTATCTTTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QILGQYLSLLTLSHVFKVKRFKY*GSIFPS Trigger: AGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTT...CACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS-3UTR CAA 90 bp | AATGGACAGTTACTACTAAACGATTCAAATACTTGGGCAGTATCTTTCCCTCTTAAACGATTCAAATACTaGGGCAGTATCTTTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NGQLLLNDSNTWAVSFPLKRFKY*GSIFPS Trigger: AGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTT...AAGAGGGAAAGATACTGCCCAAGTATTTGAATCGTTTAGTAGTAACTGTCCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 |
||
| CDS GCA 72 bp | GGCCTCGTCCGCCTGGGCGTCCAGCAGACTCTGGAATaGCGCCCGGAGGAGAAGCGTGAAGGCGTTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLVRLGVQQTLE*RPEEKREGVGV Trigger: GACTCCAACGCCTTCACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000472610.5 ENST00000479958.6 ENST00000496071.5 ENST00000602574.5 |
||
| CDS CCA 72 bp | AACACGGCCTCGTCCGCCTGGGCGTCCAGCAGACTCTaGAATGCCGCCCGGAGGAGAAGCGTGAAGGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: NTASSAWASSRL*NAARRRSVKAL Trigger: CAACGCCTTCACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCCGTGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000472610.5 ENST00000479958.6 ENST00000496071.5 ENST00000602574.5 |
||
| CDS TCA 72 bp | CCAGCAGACTCTGGAATGCCGCCCGGAGGAGAAGCGTaGAGGCGTTGGAGTCGAAGGAGCGGGGATCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PADSGMPPGGEA*RRWSRRSGDPP Trigger: TGGCGGATCCCCGCTCCTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000472610.5 ENST00000479958.6 ENST00000496071.5 ENST00000602574.5 |
||
| CDS CAA 72 bp | CTCTGGAATGCCGCCCGGAGGAGAAGCGTGAAGGCGTaGGAGTCGAAGGAGCGGGGATCCGCCAGCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LWNAARRRSVKA*ESKERGSASIW Trigger: CCAGATGCTGGCGGATCCCCGCTCCTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGGCGGCATTCCAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000472610.5 ENST00000479958.6 ENST00000496071.5 ENST00000602574.5 |
||
| CDS CAA 90 bp | TCCAGCAGACTCTGGAATGCCGCCCGGAGGAGAAGCGTGAAGGCGTaGGAGTCGAAGGAGCGGGGATCCGCCAGCATCTGGAAGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLWNAARRRSVKA*ESKERGSASIWKPF Trigger: GAAAGGCTTCCAGATGCTGGCGGATCCCCGCTCCTTCGACTCCAACGCCTTCACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000456711.5 ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000472610.5 ENST00000479958.6 ENST00000496071.5 ENST00000602574.5 |
||
| CDS GCA 72 bp | AAGGAGCGGGGATCCGCCAGCATCTGGAAGCCTTTCTaGACAGACTCCGAGAGCTCCATTGTGAGCGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KERGSASIWKPF*TDSESSIVSAP Trigger: CGGCGCGCTCACAATGGAGCTCTCGGAGTCTGTGCAGAAAGGCTTCCAGATGCTGGCGGATCCCCGCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376836.8 ENST00000468179.6 ENST00000602574.5 |
||
| CDS CCA 72 bp | GCGTTGGAGTCGAAGGAGCGGGGATCCGCCAGCATCTaGAAGCCTTTCTGCACAGACTCCGAGAGCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: ALESKERGSASI*KPFCTDSESSI Trigger: AATGGAGCTCTCGGAGTCTGTGCAGAAAGGCTTCCAGATGCTGGCGGATCCCCGCTCCTTCGACTCCAACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000376836.8 ENST00000456711.5 ENST00000468179.6 ENST00000470045.1 ENST00000479958.6 ENST00000602574.5 |
||
| CDS CCA 72 bp | GAGACTGGGAGGGAAACCGGGCCAGGAACGTGGAGTTaGCTCTATGCAGGTGCCAAGTGGGGCCAAAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: ETGRETGPGTWS*LYAGAKWGQNN Trigger: ATTGTTTTGGCCCCACTTGGCACCTGCATAGAGCCAACTCCACGTTCCTGGCCCGGTTTCCCTCCCAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468469.5 |
||
| CDS TCA 72 bp | AGCCCTGGAAGCTTGAATTGCAGGGAGCTCCCCAGATaGAGTCCAACTGTCAAAACAGCCGCAGCCTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SPGSLNCRELPR*SPTVKTAAASD Trigger: GTCTGAGGCTGCGGCTGTTTTGACAGTTGGACTTCATCTGGGGAGCTCCCTGCAATTCAAGCTTCCAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468469.5 |
||
| CDS CAA 90 bp | CACCAACACTCTCCATTCATACCTGCAAGTGAAAAGTGCCTCAGCTaGACACCTTATACAGTACCTACCTTCCCAGTAGGATTTCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HQHSPFIPASEKCLS*TPYTVPTFPVGFLG Trigger: CCCTAGAAATCCTACTGGGAAGGTAGGTACTGTATAAGGTGTCAAGCTGAGGCACTTTTCACTTGCAGGTATGAATGGAGAGTGTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000479958.6 ENST00000602574.5 |
||
| CDS TCA 72 bp | CACTCGGGCGGATCGTTAACTTCCCCAAGTTACAACTaGGTTGCTCTTTCCAGGCTTTTCGAAGCATCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: HSGGSLTSPSYN*VALSRLFEASL Trigger: TAAAGATGCTTCGAAAAGCCTGGAAAGAGCAACTCAGTTGTAACTTGGGGAAGTTAACGATCCGCCCGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000376836.8 ENST00000444869.5 ENST00000448361.5 ENST00000456711.5 ENST00000463688.6 ENST00000479958.6 ENST00000483684.1 ENST00000496071.5 ENST00000602574.5 |
||
| CDS CAA 90 bp | ACATGCCCTTTGGCTCCTTTTCTTTGGGTCAAGATCCCGAAGATCTaGTTTCACACCAACACTCTCCATTCATACCTGATATTCCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TCPLAPFLWVKIPKI*FHTNTLHSYLIFRA Trigger: TGCACGGAATATCAGGTATGAATGGAGAGTGTTGGTGTGAAACAAGATCTTCGGGATCTTGACCCAAAGAAAAGGAGCCAAAGGGCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496071.5 |
||
| CDS CAA 72 bp | TCTCCATTCATACCTGCAAGTGAAAAGTGCCTCAGCTaGACACCTTATACAGTACCTACCTTCCCAGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPFIPASEKCLS*TPYTVPTFPVG Trigger: TCCTACTGGGAAGGTAGGTACTGTATAAGGTGTCAAGCTGAGGCACTTTTCACTTGCAGGTATGAATGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000479958.6 ENST00000602574.5 |
||
| CDS CAA 90 bp | ACATGCCCTTTGGCTCCTTTTCTTTGGGTCAAGATCCCGAAGATCTaGTTTCACACCAACACTCTCCATTCATACCTGCAAGTGAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: TCPLAPFLWVKIPKI*FHTNTLHSYLQVKS Trigger: ACTTTTCACTTGCAGGTATGAATGGAGAGTGTTGGTGTGAAACAAGATCTTCGGGATCTTGACCCAAAGAAAAGGAGCCAAAGGGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000463688.6 ENST00000468179.6 ENST00000479958.6 ENST00000602574.5 |
||
| CDS TCA 72 bp | TGTTTCACACCAACACTCTCCATTCATACCTGCAAGTaGAAAGTGCCTCAGCTTGACACCTTATACAGTACC | + |
|
Preference number: 6 (lower is better) Translates to: CFTPTLSIHTCK*KVPQLDTLYST Trigger: GGTACTGTATAAGGTGTCAAGCTGAGGCACTTTTCACTTGCAGGTATGAATGGAGAGTGTTGGTGTGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000463688.6 ENST00000468179.6 ENST00000470045.1 ENST00000479958.6 ENST00000602574.5 |
||
| CDS CAA 72 bp | TTGGCTCCTTTTCTTTGGGTCAAGATCCCGAAGATCTaGTTTCACACCAACACTCTCCATTCATACCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LAPFLWVKIPKI*FHTNTLHSYLQ Trigger: TTGCAGGTATGAATGGAGAGTGTTGGTGTGAAACAAGATCTTCGGGATCTTGACCCAAAGAAAAGGAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000463688.6 ENST00000468179.6 ENST00000479958.6 ENST00000602574.5 |
||
| CDS CAA 72 bp | CTTCAATTGCTTGACATGCCCTTTGGCTCCTTTTCTTaGGGTCAAGATCCCGAAGATCTTGTTTCACACCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQLLDMPFGSFS*GQDPEDLVSHQ Trigger: TTGGTGTGAAACAAGATCTTCGGGATCTTGACCCAAAGAAAAGGAGCCAAAGGGCATGTCAAGCAATTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000463688.6 ENST00000468179.6 ENST00000479958.6 ENST00000496071.5 ENST00000602574.5 |
||
| CDS CAA 90 bp | TCAGACAAGGCTAAACACCTTAGATGTTTAGGCCACAAACAAGACTaGAACACCGGCTTTACAAAAGAACAAAGAGACTGGGAGGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SDKAKHLRCLGHKQD*NTGFTKEQRDWEGN Trigger: GTTTCCCTCCCAGTCTCTTTGTTCTTTTGTAAAGCCGGTGTTCAAGTCTTGTTTGTGGCCTAAACATCTAAGGTGTTTAGCCTTGTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468469.5 |
||
| CDS CCA 72 bp | TTCCATGCTGCAACTAAAACTAATCTCTGGATAGGATaGGGAATCAGTGTTCTTCCCAGTAGGATTTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: FHAATKTNLWIG*GISVLPSRISR Trigger: CCTAGAAATCCTACTGGGAAGAACACTGATTCCCCATCCTATCCAGAGATTAGTTTTAGTTGCAGCATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444869.5 |
||
| CDS CAA 72 bp | TTGGCTCCTTTTCTTTGGGTCAAGATCCCGAAGATCTaGTTTCACACCAACACTCTCCATTCATACCTGATA | + |
|
Preference number: 6 (lower is better) Translates to: LAPFLWVKIPKI*FHTNTLHSYLI Trigger: TATCAGGTATGAATGGAGAGTGTTGGTGTGAAACAAGATCTTCGGGATCTTGACCCAAAGAAAAGGAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496071.5 |
||
| CDS TCA 72 bp | ATGTTCAAATCGGTTATTTGCCCTCACACTGAAACATaGTTTCTAACCGGATCCTTAACCGCCCAGATACAT | + |
|
Preference number: 6 (lower is better) Translates to: MFKSVICPHTET*FLTGSLTAQIH Trigger: ATGTATCTGGGCGGTTAAGGATCCGGTTAGAAATCATGTTTCAGTGTGAGGGCAAATAACCGATTTGAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602574.5 |
||
| CDS CAA 72 bp | GCTAAACACCTTAGATGTTTAGGCCACAAACAAGACTaGAACACCGGCTTTACAAAAGAACAAAGAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: AKHLRCLGHKQD*NTGFTKEQRDW Trigger: CCAGTCTCTTTGTTCTTTTGTAAAGCCGGTGTTCAAGTCTTGTTTGTGGCCTAAACATCTAAGGTGTTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468469.5 |
||