Pregenerated sensors for COMMD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173163Ensembl transcript IDs: ENST00000311832.5, ENST00000427417.1, ENST00000444166.1, ENST00000445644.5, ENST00000455659.1, ENST00000458337.5, ENST00000471704.1, ENST00000472729.1
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCAGCGGCTCTGGTTCATGAGGCTCTCACGGATTTTTGTCTTGTaGCTCTTCCAGAATTTGGAAATGACAGCAGCTTGGTCAGATGTG | + |
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Preference number: 1 (lower is better) Translates to: FQRLWFMRLSRIFVL*LFQNLEMTAAWSDV Trigger: CACATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAGCCGCTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| 3UTR TCA 90 bp | ATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTaGGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: MTAAWSDVIPPCFLV*AVKNASSWLKSMSA Trigger: TGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR GCA 90 bp | GTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATAGACCA | + |
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Preference number: 1 (lower is better) Translates to: VRCDPTLLFGLSSQE*LQLVEIHVCRRNRP Trigger: TGGTCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| 3UTR GCA 90 bp | GTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATAGAATA | + |
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Preference number: 1 (lower is better) Translates to: VRCDPTLLFGLSSQE*LQLVEIHVCRRNRI Trigger: TATTCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| 3UTR-3UTR CCA 90 bp | GCAAGTAGAGGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAACTTAGAAAAGGTCAGTaGGGAGGGATCATGGACACC | + |
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Preference number: 2 (lower is better) Translates to: ASRGRKTECEDLIPMRAQLRKGQ*GGIMDT Trigger: GGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAG...TTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCCTCTACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| 3UTR CAA 90 bp | AATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTaGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: NDSSLVRCDPTLLFG*SSQECLQLVEIHVC Trigger: GCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR CAA 90 bp | CTATTCCAGCGGCTCTGGTTCATGAGGCTCTCACGGATTTTTGTCTaGTGGCTCTTCCAGAATTTGGAAATGACAGCAGCTTGGTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LFQRLWFMRLSRIFV*WLFQNLEMTAAWSD Trigger: ATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAGCCGCTGGAATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCTTCCAGAATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTCCTTGCTTTTTGGTTTaGGCAGTCAAGAATGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: WLFQNLEMTAAWSDVIPPPCFLV*AVKNAS Trigger: GGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGG...AGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGAAGAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGAATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTCAGGCCCAGAATAGCTaGTGTAATCCCAGCAATTGG | + |
|
Preference number: 2 (lower is better) Translates to: FQNLEMTAAWSDVIPPCFQAQNS*CNPSNW Trigger: CCAATTGCTGGGATTACAGCAGCTATTCTGGGCCTG...AAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| 3UTR-3UTR GCA 90 bp | GAATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: EFGNDSSLVRCDPTLLFGLSSQE*LQLVEI Trigger: GATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAA...ACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAAGAATGCCTCCAGCTaGTTGAAATCCATGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: FGNDSSLVRCDPTLLFGLKNASS*LKSMSA Trigger: TGCAGACATGGATTTCAACCAGCTGGAGGCATTCTT...CAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR-3UTR CCA 90 bp | GAATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTAAGAATGCCTCCAGCTaGTTGAAATCCATGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: EFGNDSSLVRCDPTLLFGKNASS*LKSMSA Trigger: TGCAGACATGGATTTCAACCAGCTGGAGGCATTCTT...ACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR-3UTR GCA 90 bp | AATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATC | + |
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Preference number: 2 (lower is better) Translates to: NLEMTAAWSDVIPPCFLVLSSQE*LQLVEI Trigger: GATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAA...AACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR GCA 72 bp | GATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATCCATGTCTGCAGACGC | + |
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Preference number: 3 (lower is better) Translates to: DPTLLFGLSSQE*LQLVEIHVCRR Trigger: GCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR TCA 72 bp | GCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTaGGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCC | + |
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Preference number: 3 (lower is better) Translates to: AWSDVIPPCFLV*AVKNASSWLKS Trigger: GGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR GCA 72 bp | AGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTaGAGACGCAATAGACCAGCCACTCCTTTAACCCAA | + |
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Preference number: 3 (lower is better) Translates to: SQECLQLVEIHV*RRNRPATPLTQ Trigger: TTGGGTTAAAGGAGTGGCTGGTCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| 3UTR-3UTR CAA 90 bp | TTCCAGAATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTAATGCCTCCAGCTGGTaGAAATCCATGTCTGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FQNLEMTAAWSDVIPPCFNASSW*KSMSAD Trigger: GTCTGCAGACATGGATTTCAACCAGCTGGAGGCATT...AAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| 3UTR CCA 72 bp | CTCTGGTTCATGAGGCTCTCACGGATTTTTGTCTTGTaGCTCTTCCAGAATTTGGAAATGACAGCAGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LWFMRLSRIFVL*LFQNLEMTAAW Trigger: CCAAGCTGCTGTCATTTCCAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| 3UTR CCA 72 bp | CAATGCGGGCACAAGAATTTTCTTAGAAAAGGTCAGTaGGGAGGGATCATGGACACCTTGGTTTCAACAACT | + |
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Preference number: 3 (lower is better) Translates to: QCGHKNFLRKGQ*GGIMDTLVSTT Trigger: AGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAGAAAATTCTTGTGCCCGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| 3UTR CCA 72 bp | TTAGAAAAGGTCAGTGGGGAGGGATCATGGACACCTTaGTTTCAACAACTCCAACTCCTTCATACATCATCT | + |
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Preference number: 3 (lower is better) Translates to: LEKVSGEGSWTP*FQQLQLLHTSS Trigger: AGATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR GCA 90 bp | CCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCCCGCCGCCATGCTCTaGGAAGGCCCCGCCCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: PTLLFGLSSQECLQLVEIPAAML*EGPAPQ Trigger: TTGCGGGGCGGGGCCTTCGCAGAGCATGGCGGCGGG...GATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| CDS-3UTR GCA 90 bp | TTCTTAGAAAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCCCGCCGCCATGCTCTaGGAAGGCCCCGCCCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLEKVSGEGSWTPWFQQLPAAML*EGPAPQ Trigger: TTGCGGGGCGGGGCCTTCGCAGAGCATGGCGGCGGG...GAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR GCA 90 bp | AAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTGCCCGCTCAGGGGTTTaGCACCCTCAAGCTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KGQWGGIMDTLVSTTPTPARSGV*HPQARP Trigger: CGGGCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGC...AGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR GCA 90 bp | TGGCTCTTCCAGAATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTGCCCGCTCAGGGGTTTaGCACCCTCAAGCTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WLFQNLEMTAAWSDVIPPARSGV*HPQARP Trigger: CGGGCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGC...AGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGAAGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| CDS-3UTR TCA 90 bp | TGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGTAGCAGCTCCTCTGTaGTGCCGGGGTACCCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: CDPTLLFGLSSQECLQLVVAAPL*CRGTRG Trigger: TCCACGGGTACCCCGGCATCACAGAGGAGCTGCTAC...AACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| CDS-3UTR TCA 90 bp | GGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTTCATACATCATCGTAGCAGCTCCTCTGTaGTGCCGGGGTACCCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GGIMDTLVSTTPTPSYIIVAAPL*CRGTRG Trigger: TCCACGGGTACCCCGGCATCACAGAGGAGCTGCTAC...GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CCA 90 bp | TTCTTAGAAAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCATGCCGGGGTACCCGTaGAAAGTGTCCTGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLEKVSGEGSWTPWFQQLMPGYP*KVSWAS Trigger: GCTGGCCCAGGACACTTTCCACGGGTACCCCGGCAT...GAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR TCA 90 bp | GTCTGCAGACGCAATAGACCAGCCACTCCTTTAACCCAAGTCAAGTTTCCAGGCATGCCTCCAGCTGGTTaGAATCCATGTCTGCAGACG | + |
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Preference number: 4 (lower is better) Translates to: VCRRNRPATPLTQVKFPGMPPAG*NPCLQT Trigger: CGTCTGCAGACATGGATTTCAACCAGCTGGAGGCAT...GCCTGGAAACTTGACTTGGGTTAAAGGAGTGGCTGGTCTATTGCGTCTGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| CDS-3UTR CCA 90 bp | ACCTTGCTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATATGCCGGGGTACCCGTaGAAAGTGTCCTGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TLLFGLSSQECLQLVEIHMPGYP*KVSWAS Trigger: GCTGGCCCAGGACACTTTCCACGGGTACCCCGGCAT...ATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| CDS-3UTR CCA 90 bp | AAAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCCTATTCCAGCGGCTCTaGTTCATGAGGCTCTCACGG | + |
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Preference number: 4 (lower is better) Translates to: KRSVGRDHGHLGFNNSNSLFQRL*FMRLSR Trigger: CCGTGAGAGCCTCATGAACCAGAGCCGCTGGAATAG...GGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR TCA 90 bp | AAAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCATGCCTCCAGCTGGTTaGAATCCATGTCTGCAGACG | + |
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Preference number: 4 (lower is better) Translates to: KRSVGRDHGHLGFNNSNSMPPAG*NPCLQT Trigger: CGTCTGCAGACATGGATTTCAACCAGCTGGAGGCAT...GGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR TCA 90 bp | CAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATAGACCAGCCCAGCTTGGTCAGATGTaGTCCCACCTTGCTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: QECLQLVEIHVCRRNRPAQLGQM*SHLAFW Trigger: CCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTG...GGCTGGTCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| CDS-3UTR TCA 90 bp | AAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTATGCACACTGAAGGGTaGGAACCTCTGCACTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KGQWGGIMDTLVSTTPTPMHTEG*EPLHWN Trigger: GTTCCAGTGCAGAGGTTCTCACCCTTCAGTGTGCAT...AGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR TCA 90 bp | TCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTTCATAGCTGAGTGCCTTGACTaGGACTTGCCATCAACTCTC | + |
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Preference number: 4 (lower is better) Translates to: SVGRDHGHLGFNNSNSFIAECLD*DLPSTL Trigger: GAGAGTTGATGGCAAGTCTCAGTCAAGGCACTCAGC...TATGAAGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CCA 90 bp | GCAAGTAGAGGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAACCTCTGGATATAGCTaGCTCCGTAGCAGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASRGRKTECEDLIPMRAQTSGYS*LRSSSS Trigger: AGAGGAGCTGCTACGGAGCCAGCTATATCCAGAGGT...TTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCCTCTACTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CCA 90 bp | AGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATAGAACCTCTGGATATAGCTaGCTCCGTAGCAGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSQECLQLVEIHVCRRNRTSGYS*LRSSSS Trigger: AGAGGAGCTGCTACGGAGCCAGCTATATCCAGAGGT...TCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| CDS-3UTR CCA 90 bp | TGCAGACGCAATAGACCAGCCACTCCTTTAACCCAAGTCAAGTTTCCAGGCCCAGAAATGACAGCAGCTTaGTCAGATGTGATCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: CRRNRPATPLTQVKFPGPEMTAA*SDVIPP Trigger: AGGTGGGATCACATCTGACCAAGCTGCTGTCATTTC...TGGGCCTGGAAACTTGACTTGGGTTAAAGGAGTGGCTGGTCTATTGCGTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| CDS-3UTR TCA 90 bp | GCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATAGACCCTTGCTTTTTGGTTTaGGCAGTCAAGAATGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: AVKNASSWLKSMSADAIDPCFLV*AVKNAS Trigger: GGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGG...GTCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| CDS-3UTR TCA 90 bp | TCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTTCATACAGCTTGGTCAGATGTaGTCCCACCTTGCTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SVGRDHGHLGFNNSNSFIQLGQM*SHLAFW Trigger: CCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTG...TATGAAGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR GCA 90 bp | GCAAGTAGAGGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAGCCTTGACTGAGACTTaGCATCAACTCTCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ASRGRKTECEDLIPMRAQALTET*HQLSSS Trigger: TGAGCTGGAGAGTTGATGGCAAGTCTCAGTCAAGGC...TTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCCTCTACTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CCA 90 bp | AGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAAACCTCTGGATATAGCTaGCTCCGTAGCAGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSLVRCDPTLLFGLSSQETSGYS*LRSSSS Trigger: AGAGGAGCTGCTACGGAGCCAGCTATATCCAGAGGT...TTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| CDS-3UTR CCA 90 bp | GAATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTCTATTCCAGCGGCTCTaGTTCATGAGGCTCTCACGG | + |
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Preference number: 4 (lower is better) Translates to: EFGNDSSLVRCDPTLLFGLFQRL*FMRLSR Trigger: CCGTGAGAGCCTCATGAACCAGAGCCGCTGGAATAG...ACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| 3UTR CAA 72 bp | CGGCTCTGGTTCATGAGGCTCTCACGGATTTTTGTCTaGTGGCTCTTCCAGAATTTGGAAATGACAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RLWFMRLSRIFV*WLFQNLEMTAA Trigger: AGCTGCTGTCATTTCCAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| CDS-3UTR TCA 90 bp | ACCTTGCTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATATGCCTCCAGCTGGTTaGAATCCATGTCTGCAGACG | + |
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Preference number: 4 (lower is better) Translates to: TLLFGLSSQECLQLVEIHMPPAG*NPCLQT Trigger: CGTCTGCAGACATGGATTTCAACCAGCTGGAGGCAT...ATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| CDS-3UTR TCA 90 bp | TCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTTCATACCTTGCTTTTTGGTTTaGGCAGTCAAGAATGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SVGRDHGHLGFNNSNSFIPCFLV*AVKNAS Trigger: GGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGG...TATGAAGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR GCA 90 bp | TTCCAGGCCCAGAATAGCTGCTGTAATCCCAGCAATTGGGAGGCTAAAGAGAGATTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATC | + |
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Preference number: 4 (lower is better) Translates to: FQAQNSCCNPSNWEAKERLSSQE*LQLVEI Trigger: GATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAA...TCTCTCTTTAGCCTCCCAATTGCTGGGATTACAGCAGCTATTCTGGGCCTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| CDS-3UTR GCA 90 bp | AGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAACAGGCCCAGAATAGCTaGTGTAATCCCAGCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVRCDPTLLFGLSSQEQAQNS*CNPSNW Trigger: CCAATTGCTGGGATTACAGCAGCTATTCTGGGCCTG...TTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455659.1 |
||
| CDS-3UTR CCA 90 bp | TGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATGACAGCAGCTTaGTCAGATGTGATCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CDPTLLFGLSSQECLQLVEMTAA*SDVIPP Trigger: AGGTGGGATCACATCTGACCAAGCTGCTGTCATTTC...AACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR CCA 90 bp | ACGCCGTATGGACCCCTCTTGGTTTCAACAACTCCAACTCCTTCATACATCATCCGTATGGACCCCTCTTaGTTTCAACAACTCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TPYGPLLVSTTPTPSYIIRMDPS*FQQLQL Trigger: GAGTTGGAGTTGTTGAAACCAAGAGGGGTCCATACG...GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGAGGGGTCCATACGGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444166.1 |
||
| CDS-3UTR TCA 90 bp | ACCTTGCTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATCAGCTTGGTCAGATGTaGTCCCACCTTGCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLFGLSSQECLQLVEIHQLGQM*SHLAFW Trigger: CCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTG...ATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR CCA 90 bp | TTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATAAGAATGCCTCCAGCTaGTTGAAATCCATGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSQECLQLVEIHVCRRNKNASS*LKSMSA Trigger: TGCAGACATGGATTTCAACCAGCTGGAGGCATTCTT...ATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR CCA 90 bp | ACGCCGTATGGACCCCTCTTGGTTTCAACAACTCCAACTCCTTCATACATCATCCATCTTCAGTTAGGCTaGCTGATCAGTGTGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TPYGPLLVSTTPTPSYIIHLQLG*LISVLI Trigger: TATCAGCACACTGATCAGCCAGCCTAACTGAAGATG...GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGAGGGGTCCATACGGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444166.1 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTTCATAGGATCATGGACACCTTaGTTTCAACAACTCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SVGRDHGHLGFNNSNSFIGSWTP*FQQLQL Trigger: GAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCC...TATGAAGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR CCA 90 bp | GGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTCTTAGAAAAGGTCAGTaGGGAGGGATCATGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: GRKTECEDLIPMRAQEFSLRKGQ*GGIMDT Trigger: GGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAG...AGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| 3UTR CAA 72 bp | AGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTaGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SLVRCDPTLLFG*SSQECLQLVEI Trigger: GATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR TCA 90 bp | GGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTTCATACATCATCTCCAGAATTTGGAAATaGCAGCAGCTTGGTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GGIMDTLVSTTPTPSYIISRIWK*QQLGQM Trigger: CATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGA...GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR TCA 90 bp | CTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCTCCAGAATTTGGAAATaGCAGCAGCTTGGTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFGLSSQECLQLVEIHVCSRIWK*QQLGQM Trigger: CATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGA...GCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR TCA 90 bp | ACGCCGTATGGACCCCTCTTGGTTTCAACAACTCCAACTCCTTCATACATCATCACTTTCTTCTACCTCTaGCAGCGTCTTCAGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPYGPLLVSTTPTPSYIITFFYL*QRLQNL Trigger: CAAATTCTGAAGACGCTGTCAGAGGTAGAAGAAAGT...GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGAGGGGTCCATACGGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444166.1 |
||
| CDS-3UTR GCA 90 bp | AAAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCGTTGAAATCCATGTCTaGAGACGCAATAGACTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRSVGRDHGHLGFNNSNSVEIHV*RRNRLK Trigger: CTTAAGTCTATTGCGTCTGCAGACATGGATTTCAAC...GGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR GCA 90 bp | GGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTTCATACATCATCTTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GGIMDTLVSTTPTPSYIILSSQE*LQLVEI Trigger: GATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAA...GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR GCA 90 bp | TTCCAGAATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTCAAGGCCACGGTGTaGCATGATTGTGCCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQNLEMTAAWSDVIPPCFFKATV*HDCAYE Trigger: TTCATAGGCACAATCATGGCACACCGTGGCCTTGAA...AAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445644.5 |
||
| CDS-3UTR CCA 90 bp | TTCTTAGAAAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCAAGAATGCCTCCAGCTaGTTGAAATCCATGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLEKVSGEGSWTPWFQQLKNASS*LKSMSA Trigger: TGCAGACATGGATTTCAACCAGCTGGAGGCATTCTT...GAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAAAAGAATGCCTCCAGCTaGTTGAAATCCATGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVRCDPTLLFGLSSQEKNASS*LKSMSA Trigger: TGCAGACATGGATTTCAACCAGCTGGAGGCATTCTT...TTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR CCA 90 bp | TTCTTAGAAAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCATCTTCAGTTAGGCTaGCTGATCAGTGTGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: FLEKVSGEGSWTPWFQQLHLQLG*LISVLI Trigger: TATCAGCACACTGATCAGCCAGCCTAACTGAAGATG...GAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| 3UTR CAA 72 bp | CTTAGAAAAGGTCAGTGGGGAGGGATCATGGACACCTaGGTTTCAACAACTCCAACTCCTTCATACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRKGQWGGIMDT*VSTTPTPSYII Trigger: GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR TCA 90 bp | AAATCCATGTCTGCAGACGCAATAGAATATAAAAGCCAGATGTGGTGGTGTGCACCTTGCTTTTTGGTTTaGGCAGTCAAGAATGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSMSADAIEYKSQMWWCAPCFLV*AVKNAS Trigger: GGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGG...TGCACACCACCACATCTGGCTTTTATATTCTATTGCGTCTGCAGACATGGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445644.5 |
||
| CDS-3UTR TCA 90 bp | ACCTTGCTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATTCCAGAATTTGGAAATaGCAGCAGCTTGGTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLLFGLSSQECLQLVEIHSRIWK*QQLGQM Trigger: CATCTGACCAAGCTGCTGTCATTTCCAAATTCTGGA...ATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR TCA 90 bp | GGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTAACATTTATGCACACTaGAGGGTGAGAACCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRKTECEDLIPMRAQEFSNIYAH*RVRTSA Trigger: TGCAGAGGTTCTCACCCTTCAGTGTGCATAAATGTT...AGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR GCA 90 bp | TTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTGTTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FGNDSSLVRCDPTLLFGLLSSQE*LQLVEI Trigger: GATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAA...CAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR GCA 90 bp | AATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTGTTGAAATCCATGTCTaGAGACGCAATAGACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLEMTAAWSDVIPPCFLVVEIHV*RRNRPA Trigger: GGCTGGTCTATTGCGTCTGCAGACATGGATTTCAAC...AACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455659.1 |
||
| CDS-3UTR CCA 90 bp | CGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTTAGAAAAGGTCAGTGGGGAAATGACAGCAGCTTaGTCAGATGTGATCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RGFNTNAGTRIFLEKVSGEMTAA*SDVIPP Trigger: AGGTGGGATCACATCTGACCAAGCTGCTGTCATTTC...CCCACTGACCTTTTCTAAGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR CCA 90 bp | CGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTTAGAAAAGGTCAGTGGGAGTGGGGAGGGATCATaGACACCTTGGTTTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RGFNTNAGTRIFLEKVSGSGEGS*TPWFQQ Trigger: TTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACT...CCCACTGACCTTTTCTAAGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR TCA 90 bp | GGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTACTTTCTTCTACCTCTaGCAGCGTCTTCAGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRKTECEDLIPMRAQEFSTFFYL*QRLQNL Trigger: CAAATTCTGAAGACGCTGTCAGAGGTAGAAGAAAGT...AGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR CCA 90 bp | TTGAAATCCATGTCTGCAGACGCAATAGAATATAAAAGCCAGATGTGGTGGTGTCATTGCACTCTATCCTaGGCAACACAGCAAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSMSADAIEYKSQMWWCHCTLS*ATQQDP Trigger: AGGATCTTGCTGTGTTGCCCAGGATAGAGTGCAATG...ACACCACCACATCTGGCTTTTATATTCTATTGCGTCTGCAGACATGGATTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445644.5 |
||
| CDS GCA 90 bp | GGAAAGTGTCCTGGGCCAGCGCATTCAGCAGCCCGCTCAGGGGTTTaGCACCCTCAAGCTCGCCCGCCGCCATGCTCTGCGAAGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GKCPGPAHSAARSGV*HPQARPPPCSAKAP Trigger: CGGGGCCTTCGCAGAGCATGGCGGCGGGCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGCTGCTGAATGCGCTGGCCCAGGACACTTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
||
| CDS CCA 90 bp | CGTAGCAGCTCCTCTGTGATGCCGGGGTACCCGTGGAAAGTGTCCTaGGCCAGCGCATTCAGCAGCCCGCTCAGGGGTTTGCCACCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSSSSVMPGYPWKVS*ASAFSSPLRGLPPS Trigger: TGAGGGTGGCAAACCCCTGAGCGGGCTGCTGAATGCGCTGGCCCAGGACACTTTCCACGGGTACCCCGGCATCACAGAGGAGCTGCTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
||
| CDS TCA 90 bp | CGGGTGGCACCTCTGGATATAGCTGGCTCCGTAGCAGCTCCTCTGTaGTGCCGGGGTACCCGTGGAAAGTGTCCTGGGCCAGCGCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVAPLDIAGSVAAPL*CRGTRGKCPGPAHS Trigger: TGAATGCGCTGGCCCAGGACACTTTCCACGGGTACCCCGGCATCACAGAGGAGCTGCTACGGAGCCAGCTATATCCAGAGGTGCCACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
||
| CDS CCA 90 bp | GCCAGAAAGGGGCGGAACTCCTCGGGTGGCACCTCTGGATATAGCTaGCTCCGTAGCAGCTCCTCTGTGATGCCGGGGTACCCGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ARKGRNSSGGTSGYS*LRSSSSVMPGYPWK Trigger: TTTCCACGGGTACCCCGGCATCACAGAGGAGCTGCTACGGAGCCAGCTATATCCAGAGGTGCCACCCGAGGAGTTCCGCCCCTTTCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
||
| CDS CCA 90 bp | TCAACTCTCCAGCTCAGGCCCCGAAGCCCGCTATTCCAGCGGCTCTaGTTCATGAGGCTCTCACGGATTTTTGTCTTGTGGCTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: STLQLRPRSPLFQRL*FMRLSRIFVLWLFQ Trigger: CTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAGCCGCTGGAATAGCGGGCTTCGGGGCCTGAGCTGGAGAGTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000471704.1 ENST00000472729.1 |
||
| CDS TCA 90 bp | TCCAGCTCAGGCCCCGAAGCCCGCTATTCCAGCGGCTCTGGTTCATaGGGCTCTCACGGATTTTTGTCTTGTGGCTCTTCCAGAATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSGPEARYSSGSGS*GSHGFLSCGSSRIW Trigger: CCAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAGCCGCTGGAATAGCGGGCTTCGGGGCCTGAGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000471704.1 ENST00000472729.1 |
||
| CDS GCA 90 bp | TGGCAACAGGTGTGTGTATTTGAGCTGAGTGCCTTGACTGAGACTTaGCATCAACTCTCCAGCTCAGGCCCCGAAGCCCGCTATTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WQQVCVFELSALTET*HQLSSSGPEARYSS Trigger: GCTGGAATAGCGGGCTTCGGGGCCTGAGCTGGAGAGTTGATGGCAAGTCTCAGTCAAGGCACTCAGCTCAAATACACACACCTGTTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000471704.1 ENST00000472729.1 |
||
| CDS-3UTR CAA 90 bp | TTCTTAGAAAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCAGCCCGCTCAGGGGTTaGCCACCCTCAAGCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLEKVSGEGSWTPWFQQLSPLRG*PPSSSP Trigger: GGGCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGCT...GAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR CAA 90 bp | GAATTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTAGCCCGCTCAGGGGTTaGCCACCCTCAAGCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EFGNDSSLVRCDPTLLFGSPLRG*PPSSSP Trigger: GGGCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGCT...ACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445644.5 |
||
| CDS-3UTR CAA 90 bp | AGGCCCAGAATAGCTGCTGTAATCCCAGCAATTGGGAGGCTAAAGAGAGAGGGTTGGCTCTTCCAGAATTaGGAAATGACAGCAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPRIAAVIPAIGRLKREGWLFQN*EMTAAW Trigger: CCAAGCTGCTGTCATTTCCAAATTCTGGAAGAGCCA...ACCCTCTCTCTTTAGCCTCCCAATTGCTGGGATTACAGCAGCTATTCTGGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455659.1 |
||
| CDS-3UTR CAA 90 bp | AAAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCGGCTCTCACGGATTTTaGTCTTGTGGCTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KRSVGRDHGHLGFNNSNSGSHGF*SCGSSR Trigger: TCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCC...GGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR CAA 90 bp | ACGCCGTATGGACCCCTCTTGGTTTCAACAACTCCAACTCCTTCATACATCATCCCGTATGGACCCCTCTaGGTTTCAACAACTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TPYGPLLVSTTPTPSYIIPYGPL*VSTTPT Trigger: AGTTGGAGTTGTTGAAACCAAGAGGGGTCCATACGG...GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGAGGGGTCCATACGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444166.1 |
||
| CDS GCA 90 bp | GTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: VRCDPTLLFGLSSQE*LQLVEIHVCRRNRH Trigger: GTGTCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472729.1 |
||
| CDS-3UTR CAA 90 bp | GCAAGTAGAGGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAATGGCTCTTCCAGAATTaGGAAATGACAGCAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASRGRKTECEDLIPMRAQWLFQN*EMTAAW Trigger: CCAAGCTGCTGTCATTTCCAAATTCTGGAAGAGCCA...TTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCCTCTACTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311832.5 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATAGATGGCTCTTCCAGAATTaGGAAATGACAGCAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQECLQLVEIHVCRRNRWLFQN*EMTAAW Trigger: CCAAGCTGCTGTCATTTCCAAATTCTGGAAGAGCCA...TCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR CAA 90 bp | CTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCGGCTCTCACGGATTTTaGTCTTGTGGCTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFGLSSQECLQLVEIHVCGSHGF*SCGSSR Trigger: TCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCC...GCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCAGAGGCTCTCACGGATTTTaGTCTTGTGGCTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FGLSSQECLQLVEIHVCRGSHGF*SCGSSR Trigger: TCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCC...TCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
||
| CDS GCA 90 bp | GTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAGAATaGCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: VRCDPTLLFGLSSQE*LQLVEIHVCRRNRL Trigger: AAGTCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311832.5 ENST00000471704.1 |
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| CDS-3UTR CAA 90 bp | GGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTAATGCCTCCAGCTGGTaGAAATCCATGTCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRKTECEDLIPMRAQEFSNASSW*KSMSAD Trigger: GTCTGCAGACATGGATTTCAACCAGCTGGAGGCATT...AGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CAA 90 bp | TTTGGAAATGACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAATGCCTCCAGCTGGTaGAAATCCATGTCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FGNDSSLVRCDPTLLFGLNASSW*KSMSAD Trigger: GTCTGCAGACATGGATTTCAACCAGCTGGAGGCATT...CAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCATTTCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| CDS-3UTR CAA 90 bp | GACAGCAGCTTGGTCAGATGTGATCCCACCTTGCTTTTTGGTTTGAGCAGTCAAACCTTGCTTTTTGGTTaGAGCAGTCAAGAATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSLVRCDPTLLFGLSSQTLLFG*SSQECL Trigger: GAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGT...TTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| CDS-3UTR CAA 90 bp | ACGCCGTATGGACCCCTCTTGGTTTCAACAACTCCAACTCCTTCATACATCATCCAGCGTCTTCAGAATTaGGTTGACTTTGACCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TPYGPLLVSTTPTPSYIIQRLQN*VDFDLI Trigger: GATGAGGTCAAAGTCAACCAAATTCTGAAGACGCTG...GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGAGGGGTCCATACGGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444166.1 |
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| CDS CCA 90 bp | GGTTTCAACAACTCCAACTCCTTCATACATCATCTTCAGTTAGGCTaGCTGATCAGTGTGCTGATACTTTCTTCTACCTCTGACAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GFNNSNSFIHHLQLG*LISVLILSSTSDSV Trigger: GACGCTGTCAGAGGTAGAAGAAAGTATCAGCACACTGATCAGCCAGCCTAACTGAAGATGATGTATGAAGGAGTTGGAGTTGTTGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000311832.5 ENST00000427417.1 ENST00000444166.1 ENST00000458337.5 ENST00000472729.1 |
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| CDS-3UTR CAA 90 bp | AAATCCATGTCTGCAGACGCAATAGAATATAAAAGCCAGATGTGGTGGTGTGCAAATGCCTCCAGCTGGTaGAAATCCATGTCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KSMSADAIEYKSQMWWCANASSW*KSMSAD Trigger: GTCTGCAGACATGGATTTCAACCAGCTGGAGGCATT...TGCACACCACCACATCTGGCTTTTATATTCTATTGCGTCTGCAGACATGGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| CDS-3UTR CAA 90 bp | CTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCACCTTGCTTTTTGGTTaGAGCAGTCAAGAATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFGLSSQECLQLVEIHVCTLLFG*SSQECL Trigger: GAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGT...GCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| CDS-3UTR CAA 90 bp | GCAAGTAGAGGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAATCACGGATTTTTGTCTaGTGGCTCTTCCAGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASRGRKTECEDLIPMRAQSRIFV*WLFQNL Trigger: CAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGA...TTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCCTCTACTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CAA 90 bp | TTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTGCAGACGCAATTCACGGATTTTTGTCTaGTGGCTCTTCCAGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSQECLQLVEIHVCRRNSRIFV*WLFQNL Trigger: CAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGA...ATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000445644.5 ENST00000455659.1 |
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| CDS-3UTR CAA 90 bp | GGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTTTTGAGCTGAGTGCCTaGACTGAGACTTGCCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: GRKTECEDLIPMRAQEFSFELSA*TETCHQ Trigger: TTGATGGCAAGTCTCAGTCAAGGCACTCAGCTCAAA...AGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CAA 90 bp | ACCTTGCTTTTTGGTTTGAGCAGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGCTAAAGAGAGAGGGTaGCTTAAGCCCAGGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLLFGLSSQECLQLVEIHAKERG*LKPRNL Trigger: CAAATTCCTGGGCTTAAGCAACCCTCTCTCTTTAGC...ATGGATTTCAACCAGCTGGAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| CDS-3UTR CAA 90 bp | GGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTACCTTGCTTTTTGGTTaGAGCAGTCAAGAATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRKTECEDLIPMRAQEFSTLLFG*SSQECL Trigger: GAGGCATTCTTGACTGCTCAAACCAAAAAGCAAGGT...AGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CAA 90 bp | CTCTGGTTCATGAGGCTCTCACGGATTTTTGTCTTGTGGCTCTTCCAGAATTTGTCACGGATTTTTGTCTaGTGGCTCTTCCAGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWFMRLSRIFVLWLFQNLSRIFV*WLFQNL Trigger: CAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGA...CAAATTCTGGAAGAGCCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| CDS-3UTR CAA 90 bp | AAAGGTCAGTGGGGAGGGATCATGGACACCTTGGTTTCAACAACTCCAACTCCTGTCTTCAGAATTTGGTaGACTTTGACCTCATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KGQWGGIMDTLVSTTPTPVFRIW*TLTSSN Trigger: ATTTGATGAGGTCAAAGTCAACCAAATTCTGAAGAC...AGGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTCAGCGTCTTCAGAATTaGGTTGACTTTGACCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GRKTECEDLIPMRAQEFSQRLQN*VDFDLI Trigger: GATGAGGTCAAAGTCAACCAAATTCTGAAGACGCTG...AGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS-3UTR CAA 90 bp | CGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTTAGAAAAGGTCAGTGGGGGGATCATGGACACCTaGGTTTCAACAACTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RGFNTNAGTRIFLEKVSGGIMDT*VSTTPT Trigger: AGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCC...CCCACTGACCTTTTCTAAGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS TCA 90 bp | TCAGTTAGGCTGGCTGATCAGTGTGCTGATACTTTCTTCTACCTCTaGCAGCGTCTTCAGAATTTGGTTGACTTTGACCTCATCAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: SVRLADQCADTFFYL*QRLQNLVDFDLIKF Trigger: GAATTTGATGAGGTCAAAGTCAACCAAATTCTGAAGACGCTGTCAGAGGTAGAAGAAAGTATCAGCACACTGATCAGCCAGCCTAACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000311832.5 ENST00000427417.1 ENST00000444166.1 ENST00000458337.5 ENST00000472729.1 |
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| CDS-3UTR CAA 90 bp | ACGCCGTATGGACCCCTCTTGGTTTCAACAACTCCAACTCCTTCATACATCATCGTCTTCAGAATTTGGTaGACTTTGACCTCATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TPYGPLLVSTTPTPSYIIVFRIW*TLTSSN Trigger: ATTTGATGAGGTCAAAGTCAACCAAATTCTGAAGAC...GATGATGTATGAAGGAGTTGGAGTTGTTGAAACCAAGAGGGGTCCATACGGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444166.1 |
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| CDS-3UTR CAA 90 bp | GGCAGGAAGACTGAATGCGAGGATTTAATACCAATGCGGGCACAAGAATTTTCTGATTCCTGTCCATATTaGCCTAATTCCAGCTCTATA | + |
|
Preference number: 5 (lower is better) Translates to: GRKTECEDLIPMRAQEFSDSCPY*PNSSSI Trigger: TATAGAGCTGGAATTAGGCAAATATGGACAGGAATC...AGAAAATTCTTGTGCCCGCATTGGTATTAAATCCTCGCATTCAGTCTTCCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311832.5 |
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| CDS GCA 72 bp | CCTGGGCCAGCGCATTCAGCAGCCCGCTCAGGGGTTTaGCACCCTCAAGCTCGCCCGCCGCCATGCTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PGPAHSAARSGV*HPQARPPPCSA Trigger: CGCAGAGCATGGCGGCGGGCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGCTGCTGAATGCGCTGGCCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
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| CDS CAA 72 bp | TCCTGGGCCAGCGCATTCAGCAGCCCGCTCAGGGGTTaGCCACCCTCAAGCTCGCCCGCCGCCATGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SWASAFSSPLRG*PPSSSPAAMLC Trigger: GCAGAGCATGGCGGCGGGCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGCTGCTGAATGCGCTGGCCCAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
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| CDS CAA 90 bp | TGGAAAGTGTCCTGGGCCAGCGCATTCAGCAGCCCGCTCAGGGGTTaGCCACCCTCAAGCTCGCCCGCCGCCATGCTCTGCGAAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: WKVSWASAFSSPLRG*PPSSSPAAMLCEGP Trigger: GGGGCCTTCGCAGAGCATGGCGGCGGGCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGCTGCTGAATGCGCTGGCCCAGGACACTTTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
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| CDS CCA 72 bp | CTCCGTAGCAGCTCCTCTGTGATGCCGGGGTACCCGTaGAAAGTGTCCTGGGCCAGCGCATTCAGCAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LRSSSSVMPGYP*KVSWASAFSSP Trigger: CGGGCTGCTGAATGCGCTGGCCCAGGACACTTTCCACGGGTACCCCGGCATCACAGAGGAGCTGCTACGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
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| CDS CCA 72 bp | GGGCGGAACTCCTCGGGTGGCACCTCTGGATATAGCTaGCTCCGTAGCAGCTCCTCTGTGATGCCGGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GRNSSGGTSGYS*LRSSSSVMPGY Trigger: GTACCCCGGCATCACAGAGGAGCTGCTACGGAGCCAGCTATATCCAGAGGTGCCACCCGAGGAGTTCCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
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| CDS TCA 72 bp | CCTCTGGATATAGCTGGCTCCGTAGCAGCTCCTCTGTaGTGCCGGGGTACCCGTGGAAAGTGTCCTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLDIAGSVAAPL*CRGTRGKCPGP Trigger: TGGCCCAGGACACTTTCCACGGGTACCCCGGCATCACAGAGGAGCTGCTACGGAGCCAGCTATATCCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000445644.5 ENST00000471704.1 |
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| CDS TCA 72 bp | GGCCCCGAAGCCCGCTATTCCAGCGGCTCTGGTTCATaGGGCTCTCACGGATTTTTGTCTTGTGGCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPEARYSSGSGS*GSHGFLSCGSS Trigger: GGAAGAGCCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAGCCGCTGGAATAGCGGGCTTCGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000471704.1 ENST00000472729.1 |
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| CDS CCA 72 bp | CAGCTCAGGCCCCGAAGCCCGCTATTCCAGCGGCTCTaGTTCATGAGGCTCTCACGGATTTTTGTCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QLRPRSPLFQRL*FMRLSRIFVLW Trigger: CCACAAGACAAAAATCCGTGAGAGCCTCATGAACCAGAGCCGCTGGAATAGCGGGCTTCGGGGCCTGAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000471704.1 ENST00000472729.1 |
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| CDS GCA 72 bp | GTGTGTGTATTTGAGCTGAGTGCCTTGACTGAGACTTaGCATCAACTCTCCAGCTCAGGCCCCGAAGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VCVFELSALTET*HQLSSSGPEAR Trigger: GCGGGCTTCGGGGCCTGAGCTGGAGAGTTGATGGCAAGTCTCAGTCAAGGCACTCAGCTCAAATACACACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311832.5 ENST00000471704.1 ENST00000472729.1 |
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| CDS GCA 72 bp | ACAGCAAGATCCTGTCTTAAGAATCCCCCTCATCTTTaGCAGAAAGGGGCGGAACTCCTCGGGTGGCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: TARSCLKNPPHL*QKGAELLGWHL Trigger: GAGGTGCCACCCGAGGAGTTCCGCCCCTTTCTGGCAAAGATGAGGGGGATTCTTAAGACAGGATCTTGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445644.5 |
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| CDS CAA 72 bp | GAGGCTAAAGAGAGAGGGTTGCTTAAGCCCAGGAATTaGAGACCACCCTGGACGATATGGGGAGATTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EAKERGLLKPRN*RPPWTIWGDSV Trigger: GACAGAATCTCCCCATATCGTCCAGGGTGGTCTCAAATTCCTGGGCTTAAGCAACCCTCTCTCTTTAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| CDS CAA 72 bp | TGTAATCCCAGCAATTGGGAGGCTAAAGAGAGAGGGTaGCTTAAGCCCAGGAATTTGAGACCACCCTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: CNPSNWEAKERG*LKPRNLRPPWT Trigger: CGTCCAGGGTGGTCTCAAATTCCTGGGCTTAAGCAACCCTCTCTCTTTAGCCTCCCAATTGCTGGGATTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455659.1 |
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| CDS GCA 72 bp | AGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTaGAGACGCAATAGACACTCGCCTTTAAAATCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SQECLQLVEIHV*RRNRHSPLKSR Trigger: GCGCGATTTTAAAGGCGAGTGTCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472729.1 |
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| CDS TCA 72 bp | CTGGCTGATCAGTGTGCTGATACTTTCTTCTACCTCTaGCAGCGTCTTCAGAATTTGGTTGACTTTGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LADQCADTFFYL*QRLQNLVDFDL Trigger: GAGGTCAAAGTCAACCAAATTCTGAAGACGCTGTCAGAGGTAGAAGAAAGTATCAGCACACTGATCAGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000311832.5 ENST00000427417.1 ENST00000444166.1 ENST00000458337.5 ENST00000472729.1 |
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| CDS GCA 72 bp | AGTCAAGAATGCCTCCAGCTGGTTGAAATCCATGTCTaGAGACGCAATAGACTTAAGAATCCCCCTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: SQECLQLVEIHV*RRNRLKNPPHL Trigger: AAGATGAGGGGGATTCTTAAGTCTATTGCGTCTGCAGACATGGATTTCAACCAGCTGGAGGCATTCTTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311832.5 ENST00000471704.1 |
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| CDS CCA 72 bp | AACTCCAACTCCTTCATACATCATCTTCAGTTAGGCTaGCTGATCAGTGTGCTGATACTTTCTTCTACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSNSFIHHLQLG*LISVLILSSTS Trigger: AGAGGTAGAAGAAAGTATCAGCACACTGATCAGCCAGCCTAACTGAAGATGATGTATGAAGGAGTTGGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000311832.5 ENST00000427417.1 ENST00000444166.1 ENST00000458337.5 ENST00000472729.1 |
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| CDS CAA 90 bp | GTGCTGATACTTTCTTCTACCTCTGACAGCGTCTTCAGAATTTGGTaGACTTTGACCTCATCAAATTCCAAACACAGAAATTCAGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLILSSTSDSVFRIW*TLTSSNSKHRNSDS Trigger: GGAATCTGAATTTCTGTGTTTGGAATTTGATGAGGTCAAAGTCAACCAAATTCTGAAGACGCTGTCAGAGGTAGAAGAAAGTATCAGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000311832.5 ENST00000427417.1 ENST00000458337.5 ENST00000472729.1 |
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