RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COLQ (Homo sapiens)

Ensembl gene IDs: ENSG00000206561

Ensembl transcript IDs: ENST00000383781.8, ENST00000383786.9, ENST00000383788.10, ENST00000603469.1, ENST00000603752.1, ENST00000603808.5, ENST00000604401.2, ENST00000605797.1, ENST00000679838.1, ENST00000680240.1, ENST00000680545.1, ENST00000680897.1, ENST00000681097.1, ENST00000681222.1

Found 811 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTCAGGTaGAGTAGCGGCAGGGCGTGGAGTCGATGTAGCAGTACTGGGTGC +
Preference number: 1 (lower is better)
Translates to: PVLWGAAHLLLTALR*SSGRAWSRCSSTGC
Trigger: GCACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGAGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR CCA 90 bp ACGGGACGCTGTCAGGGGTCAGCAGGAGGCAAAGAGGTAGAGCTCTaGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCC +
Preference number: 1 (lower is better)
Translates to: TGRCQGSAGGKEVEL*PGTLCLERALCSWP
Trigger: GGGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGACCCCTGACAGCGTCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR TCA 90 bp GTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCCAGTGTGAGTaGGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGT +
Preference number: 1 (lower is better)
Translates to: VHRPRETRQRAAQCE*ECLHVSVVRGGEAC
Trigger: ACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR TCA 90 bp CTGGGCTGTGGCCAGTCGAGGGGTCCTTTGGCAGGTTCAAAGCTGTaGGCCACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTC +
Preference number: 1 (lower is better)
Translates to: LGCGQSRGPLAGSKL*ATPRERAHFPALWF
Trigger: GAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTGGCTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACTGGCCACAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 90 bp CTAGAGAGACCCGACAGCGGGCTGCCCAGTGTGAGTGAGAATGCCTaGACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATT +
Preference number: 1 (lower is better)
Translates to: LERPDSGLPSVSENA*TFRWSGAERPVLQI
Trigger: AATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR TCA 90 bp ACAGGGCTGCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTTaGTGTCACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTG +
Preference number: 1 (lower is better)
Translates to: TGLPMCLSLKTPPSG*CHLWETGSTYRHQV
Trigger: CACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 90 bp AGGTTCAAAGCTGTGAGCCACCCCGAGAGAACGTGCCCACTTCCCTaGTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCC +
Preference number: 1 (lower is better)
Translates to: RFKAVSHPERTCPLP*FVVHRPRETRQRAA
Trigger: GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTGGCTCACAGCTTTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 90 bp GACAGCGGGCTGCCCAGTGTGAGTGAGAATGCCTGCACGTTTCGGTaGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAAGAGAT +
Preference number: 1 (lower is better)
Translates to: DSGLPSVSENACTFR*SGAERPVLQIPQRD
Trigger: ATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 90 bp CAGTTAAGTCTTTTCCTGGGCAGCCACATCCACGTCAGGCTGGGCTaGGCTGTGGCCAGTCGAGGGGTCCTTTGGCAGGTTCAAAGCTGT +
Preference number: 1 (lower is better)
Translates to: QLSLFLGSHIHVRLG*AVASRGVLWQVQSC
Trigger: ACAGCTTTGAACCTGCCAAAGGACCCCTCGACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGTGGCTGCCCAGGAAAAGACTTAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 90 bp CTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTaGAGGTCACACAGTCCTCATGAGTCTCCTGGACAGGAAATGGAC +
Preference number: 1 (lower is better)
Translates to: LRTKETPTACPGVGL*RSHSPHESPGQEMD
Trigger: GTCCATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 90 bp ACTCAGGGGAGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTaGCCAGGTGTGGGCTTGTGCAGGTCACACAGTCCTCATGAGTCT +
Preference number: 1 (lower is better)
Translates to: TQGSICLRTKETPTA*PGVGLCRSHSPHES
Trigger: AGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR TCA 90 bp GGAGCTCAGGCACACAGGAGGACAAGGCTATGCAATATGCAGACATaGAAGAAATGCCACGGGACGCTGTCAGGGGTCAGCAGGAGGCAA +
Preference number: 1 (lower is better)
Translates to: GAQAHRRTRLCNMQT*KKCHGTLSGVSRRQ
Trigger: TTGCCTCCTGCTGACCCCTGACAGCGTCCCGTGGCATTTCTTTCATGTCTGCATATTGCATAGCCTTGTCCTCCTGTGTGCCTGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR TCA 90 bp GGTAGAAAGGGGTCAGCTGGATGGGGAGCCAGCCAAGGCTGTCCTTaGAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTT +
Preference number: 1 (lower is better)
Translates to: GRKGSAGWGASQGCP*STEISGLCGRQWRF
Trigger: AAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTTTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR GCA 90 bp CTGCTTGCCTCGTTTTCCTGGTCTTCCTGTGGGTCCTCGGTGTCCTaGTATCCCAGGTTCACCTTTTGGACCCATTTCACCTTTCTGCCC +
Preference number: 1 (lower is better)
Translates to: LLASFSWSSCGSSVS*YPRFTFWTHFTFLP
Trigger: GGGCAGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGATAGCAGGACACCGAGGACCCACAGGAAGACCAGGAAAACGAGGCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR CCA 90 bp TGGATGGGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATGGCGTTTTGGGTGTTCAGCCTCTCA +
Preference number: 1 (lower is better)
Translates to: WMGSQPRLSLKYRDL*SLRKAMAFWVFSLS
Trigger: TGAGAGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR TCA 90 bp CCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTaGGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCC +
Preference number: 1 (lower is better)
Translates to: PKGVPPAGKNWAIST*GLLWGWTSPWRCLS
Trigger: GGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 90 bp CTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTaGGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGT +
Preference number: 1 (lower is better)
Translates to: LWETLRRGASSLASA*GKPGSGGFSVLFHS
Trigger: ACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 90 bp GTCAAGATGGTGCCAGAGATTTTGAAACCACAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTGG +
Preference number: 1 (lower is better)
Translates to: VKMVPEILKPQEPPL*ETLRRGASSLASAW
Trigger: CCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCATCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 90 bp TTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTTaGGTGTTCAGCCTCTCAAGCTCCTCCTGGTTGTTGACCACAAAA +
Preference number: 1 (lower is better)
Translates to: LKYRDLWSLRKAMAF*VFSLSSSSWLLTTK
Trigger: TTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR CCA 90 bp CTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGTaGAGACGGGGCCAGGACATGGCCAGTTTGATGACAGTGGAGAAG +
Preference number: 1 (lower is better)
Translates to: LSSRNLSLFLSHKGW*RRGQDMASLMTVEK
Trigger: CTTCTCCACTGTCATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
3UTR CCA 90 bp TGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGACAGTGGAG +
Preference number: 1 (lower is better)
Translates to: CLSSRNLSLFLSHKG*WRRGQDMASLMTVE
Trigger: CTCCACTGTCATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
3UTR GCA 90 bp AAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATaGACGACTAATAATCTTATTGAAAAGGGAGGAGCTCAGGCACAC +
Preference number: 1 (lower is better)
Translates to: KPYSGKMVMKGSSQT*TTNNLIEKGGAQAH
Trigger: GTGTGCCTGAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTACATCCACGTCAGGCTaGGCTGGGCTGTGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: GEAAASSVGRSPPSPHGPTSTSG*AGLWPV
Trigger: GACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGT...AGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCGCGGGCTGCCCAGTGTaGGTGAGAATGCCTGCACGT +
Preference number: 2 (lower is better)
Translates to: GRALARNALPRESPLQLAAGCPV*VRMPAR
Trigger: ACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGC...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTTGGCCAGGAACGCTCTaGCTAGAGAGAGCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: GEAAASSVGRSPPSPHGPWPGTL*LERALC
Trigger: GCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCA...AGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CGGCCCTCAGGTGAAGTAGCGGCAGGGCGTGGAGTCGATGTAGCAGTACTGGGTGCCTGCACGTTTCGGTaGTCAGGGGCGGAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: RPSGEVAAGRGVDVAVLGACTFR*SGAERP
Trigger: AGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGC...ACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGAGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp CACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGGCCCAAGCTCCAGCCTGCTaGGTCCCCAAGACACAGGCT +
Preference number: 2 (lower is better)
Translates to: HLWETGSTYRHQVMVHQAQAPAC*VPKTQA
Trigger: AGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTG...GGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCCAGTGGAGAAGCTGCTaGCAGTTCTGTGGGGCGCAG +
Preference number: 2 (lower is better)
Translates to: GRALARNALPRESPLQLAQWRSC*QFCGAQ
Trigger: CTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCCTCTTCTCTAGCCTCTaGTTGGGGCAAGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: GRALARNALPRESPLQLALFSSL*LGQAWV
Trigger: GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAG...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp TGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGGCCCATCCCCACAGGTaGCGTGCTGGTCTGCAGTGT +
Preference number: 2 (lower is better)
Translates to: CLRTKETPTACPGVGLCRAHPHR*RAGLQC
Trigger: ACACTGCAGACCAGCACGGCACCTGTGGGGATGGGC...CCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAACTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTC +
Preference number: 2 (lower is better)
Translates to: PARFGGQGRRGLYSRFPKLLPVL*GAAHLL
Trigger: GAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAG...TTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp AGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACCTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTC +
Preference number: 2 (lower is better)
Translates to: RTKETPTACPGVGLCRSHLLPVL*GAAHLL
Trigger: GAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAG...GTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCTCTCTAGCCTCTGCTTaGGGCAAGCCTGGGTCAGGT +
Preference number: 2 (lower is better)
Translates to: GRALARNALPRESPLQLASLASA*GKPGSG
Trigger: ACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGA...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GAGAGACCCGACAGCGGGCTGCCCAGTGTGAGTGAGAATGCCTGCACGTTTCGGAAGGGGTCAGCTGGATaGGGAGCCAGCCAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: ERPDSGLPSVSENACTFRKGSAG*GASQGC
Trigger: ACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTT...CCGAAACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGGGCCTGGCCAACCGATaGGCCCAGGCATGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: VSRRQRGRALARNALPREGLANR*AQACQE
Trigger: TTCCTGGCATGCCTGGGCCCATCGGTTGGCCAGGCC...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR GCA 90 bp GTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGTGGAGAAGCTGCTaGCAGTTCTGTGGGGCGCAG +
Preference number: 2 (lower is better)
Translates to: VSENACTFRWSGAERPVLQWRSC*QFCGAQ
Trigger: CTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG...GAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGACATCCACGTCAGGCTaGGCTGGGCTGTGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: QRGRALARNALPRESPLQTSTSG*AGLWPV
Trigger: GACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGT...CTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCGTCACACAGTCCTCATaGGTCTCCTGGACAGGAAAT +
Preference number: 2 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPVTQSS*VSWTGN
Trigger: ATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGAC...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GAGAGACCCGACAGCGGGCTGCCCAGTGTGAGTGAGAATGCCTGCACGTTTCGGGGTGCCGTGCTGGTCTaGAGTGTAATCCACAGGGTA +
Preference number: 2 (lower is better)
Translates to: ERPDSGLPSVSENACTFRGAVLV*SVIHRV
Trigger: TACCCTGTGGATTACACTGCAGACCAGCACGGCACC...CCGAAACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp AGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCACTCCTCCCCAGGCTaGAGGAGCCCATCCCCACAG +
Preference number: 2 (lower is better)
Translates to: RTCPLPCFVVHRPRETRQHSSPG*RSPSPQ
Trigger: CTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTG...CTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp TTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAAGAGATCAAGCCTGCACGTTTCGGTaGTCAGGGGCGGAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: FRWSGAERPVLQIPQRDQACTFR*SGAERP
Trigger: AGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGC...TTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGGCCAGTCGAGGGGTCCTTTaGCAGGTTCAAAGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: HLWETGSTYRHQVMVHQASRGVL*QVQSCE
Trigger: CTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACT...GGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CAA 90 bp TTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCC +
Preference number: 2 (lower is better)
Translates to: LSHKGWWRRGQDMAS*MTVEKLLPVLWGAA
Trigger: GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
3UTR CAA 90 bp AACAGGGCTGCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTaGATGTCACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGT +
Preference number: 2 (lower is better)
Translates to: NRAAHVPVSKDATLR*MSPVGDRVHLQTPG
Trigger: ACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGACGCCACCCTCAGGTTaGTGTCACCTGTGGGAGACC +
Preference number: 2 (lower is better)
Translates to: HENNISPGLAVEAKGTGLTPPSG*CHLWET
Trigger: GGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGT...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCACAGTGGAGAAGCTGCTaGCAGTTCTGTGGGGCGCAG +
Preference number: 2 (lower is better)
Translates to: DMASLMTVEKLLPVLWGAQWRSC*QFCGAQ
Trigger: CTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp CAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTCTTCTCTAGCCTCTaGTTGGGGCAAGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: QRGRALARNALPRESPLQLFSSL*LGQAWV
Trigger: GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAG...CTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGAGAGCCTAGCGAGCCTTaGATGCACGGGGACTGCGAG +
Preference number: 2 (lower is better)
Translates to: TPRERAHFPALWFIGLEREPSEP*MHGDCE
Trigger: CTCGCAGTCCCCGTGCATGCAAGGCTCGCTAGGCTC...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CCA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCCACTTCCCTGCTTTGTaGTTCATAGGCCTAGAGAGA +
Preference number: 2 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPHFPAL*FIGLER
Trigger: TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTG...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGTCTCTAGCCTCTGCTTaGGGCAAGCCTGGGTCAGGT +
Preference number: 2 (lower is better)
Translates to: VSRRQRGRALARNALPRESLASA*GKPGSG
Trigger: ACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGA...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCCTCTGCGGAAGGCAATaGCGTTTTGGGTGTTCAGCC +
Preference number: 2 (lower is better)
Translates to: PLPCFVVHRPRETRQRAALCGRQ*RFGCSA
Trigger: GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAG...GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GGGAGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCAGTAGCGGCAGGGCGTaGAGTCGATGTAGCAGTACT +
Preference number: 2 (lower is better)
Translates to: GSICLRTKETPTACPGVGSSGRA*SRCSST
Trigger: AGTACTGCTACATCGACTCCACGCCCTGCCGCTACT...GCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GCATGTCAGGTAGCCAAAGTCAGAGCCGTCACAGTCCTCCACACCCTCATGCCGTCTACCCTTCCTTCCTaGTCGGCCAAGCTCCCCCTT +
Preference number: 2 (lower is better)
Translates to: ACQVAKVRAVTVLHTLMPSTLPS*SAKLPL
Trigger: AAGGGGGAGCTTGGCCGACCAGGAAGGAAGGGTAGA...CGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTTGGCTACCTGACATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR TCA 90 bp GGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCTGCCCAGTGTGAGTaGGAATGCCTGCACGTTTCG +
Preference number: 2 (lower is better)
Translates to: GSQPRLSLKYRDLWSLRKAAQCE*ECLHVS
Trigger: CGAAACGTGCAGGCATTCTCACTCACACTGGGCAGC...CTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp CCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCCCCTTTGGGAAACACTaGGAAGAGGAGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: PLPCFVVHRPRETRQRAAPFGKH*EEEPLL
Trigger: GAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGG...GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp AGTGTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTAGTGAGTGAGAATGCCTaGACGTTTCGGTGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: SVSENACTFRWSGAERPVVSENA*TFRWSG
Trigger: CCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC...TACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp TGTCACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGACGTGCCCACTTCCCTaGTTTGTGGTTCATAGGCCT +
Preference number: 2 (lower is better)
Translates to: CHLWETGSTYRHQVMVHQTCPLP*FVVHRP
Trigger: AGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGT...CTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGCACCCCGAGAGAACGTaGCCACTTCCCTGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: GSQPRLSLKYRDLWSLRKHPERT*PLPCFV
Trigger: CACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTG...CTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGACTCTTCTCTAGCCTCTaGTTGGGGCAAGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: AHVPVSKDATLRLMSPVGLFSSL*LGQAWV
Trigger: GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAG...TCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp AGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACTTTCTACTTGAGGTCTaGTGTGGGGGTGGACCTCAC +
Preference number: 2 (lower is better)
Translates to: RTKETPTACPGVGLCRSHFLLEV*CGGGPH
Trigger: GTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAA...GTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGTTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: QRGRALARNALPRESPLQLSHKG*WRRGQD
Trigger: GTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAA...CTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGATCTCTAGCCTCTGCTTaGGGCAAGCCTGGGTCAGGT +
Preference number: 2 (lower is better)
Translates to: AHVPVSKDATLRLMSPVGSLASA*GKPGSG
Trigger: ACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGA...TCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp TGTCACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGCAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: CHLWETGSTYRHQVMVHQQEPPL*ETLRRG
Trigger: TCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTG...CTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCAGTAGCGGCAGGGCGTaGAGTCGATGTAGCAGTACT +
Preference number: 2 (lower is better)
Translates to: MASLMTVEKLLPVLWGAASSGRA*SRCSST
Trigger: AGTACTGCTACATCGACTCCACGCCCTGCCGCTACT...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGGAACTCGCGGGGAACTaGGCCCATACACAGATTCCC +
Preference number: 2 (lower is better)
Translates to: HENNISPGLAVEAKGTGLELAGN*AHTQIP
Trigger: GGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTC...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR CAA 90 bp TGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTaGTGCAGGTCACACAGTCCTCATGAGTCTCCTGGACAGGAAATG +
Preference number: 2 (lower is better)
Translates to: CLRTKETPTACPGVG*CRSHSPHESPGQEM
Trigger: CATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp ACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGCCCGGACGGCCAGGTTaGCCAGAAGGCCCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: TKPYSGKMVMKGSSQTCTPGRPG*PEGPGL
Trigger: CAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGG...CGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CCA 90 bp CGGCCCTCAGGTGAAGTAGCGGCAGGGCGTGGAGTCGATGTAGCAGTACTGGGTCACTTCCCTGCTTTGTaGTTCATAGGCCTAGAGAGA +
Preference number: 2 (lower is better)
Translates to: RPSGEVAAGRGVDVAVLGHFPAL*FIGLER
Trigger: TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTG...ACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGAGGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTCAGCCTGCCCAGGTGTaGGCTTGTGCAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: GNFYLRSAVGVDLTLEMSQPAQV*ACAGHT
Trigger: TGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTG...AGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAATCCAGGGTAGCCCTTaGAGCCCATTGGTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: DMASLMTVEKLLPVLWGAIQGSP*SPLVLL
Trigger: CAAGAGGACCAATGGGCTCCAAGGGCTACCCTGGAT...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAATCCCTTTTCCCCTCTaGATCCAGGGTAGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: DMASLMTVEKLLPVLWGAIPFPL*IQGSPW
Trigger: CCAAGGGCTACCCTGGATCCAGAGGGGAAAAGGGAT...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR TCA 90 bp TCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGCGGGCTGCCCAGTGTaGGTGAGAATGCCTGCACGT +
Preference number: 2 (lower is better)
Translates to: SLQLVKIGQFLLEVCCGGAGCPV*VRMPAR
Trigger: ACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGC...ACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp CTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTGGGGCAAGGCAGGTTCAAAGCTGTaGGCCACCCCGAGAGAACGT +
Preference number: 2 (lower is better)
Translates to: LWETLRRGASSLASAWGKAGSKL*ATPRER
Trigger: ACGTTCTCTCGGGGTGGCTCACAGCTTTGAACCTGC...CTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTCACCCCGAGAGAACGTaGCCACTTCCCTGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: GNFYLRSAVGVDLTLEMSHPERT*PLPCFV
Trigger: CACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTG...AGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGTTTCTACTTGAGGTCTaGTGTGGGGGTGGACCTCAC +
Preference number: 2 (lower is better)
Translates to: HENNISPGLAVEAKGTGLFLLEV*CGGGPH
Trigger: GTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAA...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGCAGTACTGGGTGCATTaGAGGTCTCCATATGACCCA +
Preference number: 2 (lower is better)
Translates to: VSRRQRGRALARNALPREQYWVH*RSPYDP
Trigger: TGGGTCATATGGAGACCTGCAATGCACCCAGTACTG...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCAGTACTGGGTGCATTaGAGGTCTCCATATGACCCA +
Preference number: 2 (lower is better)
Translates to: ENACTFRWSGAERPVLQIQYWVH*RSPYDP
Trigger: TGGGTCATATGGAGACCTGCAATGCACCCAGTACTG...AATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp GTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCTGTAGCAGTACTGGGTaGATTGCAGGTCTCCATATG +
Preference number: 2 (lower is better)
Translates to: VSENACTFRWSGAERPVLCSSTG*IAGLHM
Trigger: CATATGGAGACCTGCAATGCACCCAGTACTGCTACA...GAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GACACAGGCTCATTAAATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGCCTGCACGTTTCGGTaGTCAGGGGCGGAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: DTGSLNSFVQKPKGVPPAACTFR*SGAERP
Trigger: AGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGC...AGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTATTTAATGAGCCTGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp TGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAACTCACGGCCCTCAGGTaGAGTAGCGGCAGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: WTSPWRCLSRIKLSPTQELTALR*SSGRAW
Trigger: CCACGCCCTGCCGCTACTTCACCTGAGGGCCGTGAG...TTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp AGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTCTCTTCTCTAGCCTCTaGTTGGGGCAAGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: RLSLKYRDLWSLRKAMAFLFSSL*LGQAWV
Trigger: GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAG...AAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTCACACAAAGGTTGGTaGAGACGGGGCCAGGACATG +
Preference number: 2 (lower is better)
Translates to: GNFYLRSAVGVDLTLEMSSHKGW*RRGQDM
Trigger: CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGA...AGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CAAAGTCAGAGCCGTCACAGTCCTCCACACCCTCATGCCGGTGACCATCTCCACCACTTCCCTGCTTTGTaGTTCATAGGCCTAGAGAGA +
Preference number: 2 (lower is better)
Translates to: QSQSRHSPPHPHAGDHLHHFPAL*FIGLER
Trigger: TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTG...GTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGGGGTGGACCTCACCTTaGAGATGTCTTTCCAGAATA +
Preference number: 2 (lower is better)
Translates to: QRGRALARNALPRESPLQGWTSP*RCLSRI
Trigger: TATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCC...CTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp AAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGAGACCGGGTCCACCTACAGGGGTGGACCTCACCTTaGAGATGTCTTTCCAGAATA +
Preference number: 2 (lower is better)
Translates to: KDATLRLMSPVGDRVHLQGWTSP*RCLSRI
Trigger: TATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCC...CTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp ATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGACATGCCAGGAACACCTaGGGGGCCAGGTCTACCCTT +
Preference number: 2 (lower is better)
Translates to: MDMRDIFETGGKVQREPRHARNT*GARSTL
Trigger: AAGGGTAGACCTGGCCCCCCAGGTGTTCCTGGCATG...TCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR CAA 90 bp CCTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTaGGGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAG +
Preference number: 2 (lower is better)
Translates to: PLGNTEKRSLFSSLC*GQAWVRWVLSTFSQ
Trigger: CTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp GGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTGCAGGTCTCCATATaGCCCAGGGAGATAGGTCTC +
Preference number: 2 (lower is better)
Translates to: GNFYLRSAVGVDLTLEMSLQVSI*PREIGL
Trigger: GAGACCTATCTCCCTGGGTCATATGGAGACCTGCAA...AGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCCACTCCTCCCCAGGCTaGAGGAGCCCATCCCCACAG +
Preference number: 2 (lower is better)
Translates to: KAAHRHARLIILLKREELHSSPG*RSPSPQ
Trigger: CTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTG...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp CTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCCTGGGCAGTGCATGCACGGGGACTaGGAGGTCTCCAGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LGQVGSQYFFTVKSFPGQCMHGD*EVSSSS
Trigger: GCTGGAACTGGAGACCTCGCAGTCCCCGTGCATGCA...CTGCCCAGGAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CCA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATCTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTC +
Preference number: 2 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNLLPVL*GAAHLL
Trigger: GAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAG...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGCAAGCCTGGGTCAGGTaGGTTCTCAGTACTTTTTCA +
Preference number: 2 (lower is better)
Translates to: HENNISPGLAVEAKGTGLQAWVR*VLSTFS
Trigger: TGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTG...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp TGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTAAGGGGTCAGCTGGATaGGGAGCCAGCCAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: WGWTSPWRCLSRIKLSPTKGSAG*GASQGC
Trigger: ACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTT...AGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR CAA 90 bp GGTCAAGATGGTGCCAGAGATTTTGAAACCACAAGAGCCGCCCCTTaGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTG +
Preference number: 2 (lower is better)
Translates to: GQDGARDFETTRAAP*GNTEKRSLFSSLCL
Trigger: CAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCATCTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCATGGTGCCAGAGATTTTaGAACCACAAGAGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: EMDMRDIFETGGKVQREPWCQRF*NHKSRP
Trigger: GGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCA...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp TTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAAGAGATCAACAAGCCTGGGTCAGGTaGGTTCTCAGTACTTTTTCA +
Preference number: 2 (lower is better)
Translates to: FRWSGAERPVLQIPQRDQQAWVR*VLSTFS
Trigger: TGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTG...TTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp AGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTCAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: RLSLKYRDLWSLRKAMAFQEPPL*ETLRRG
Trigger: TCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTG...AAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR CAA 90 bp CTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTaGGGTGTTCAGCCTCTCAAGCTCCTCCTGGTTGTTGACCACAAA +
Preference number: 2 (lower is better)
Translates to: LEVQRSLVSAEGNGV*GVQPLKLLLVVDHK
Trigger: TTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR GCA 90 bp GACACAGGCTCATTAAATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTCCAGGTGTGGGCTTGTaGAGGTCACACAGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: DTGSLNSFVQKPKGVPPAPGVGL*RSHSPH
Trigger: ATGAGGACTGTGTGACCTGCACAAGCCCACACCTGG...AGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTATTTAATGAGCCTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp AAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGCTTTCTGTCCCTGCTTaGCTCGTTTTCCTGGTCTTC +
Preference number: 2 (lower is better)
Translates to: KLGNFYLRSAVGVDLTLELSVPA*LVFLVF
Trigger: GAAGACCAGGAAAACGAGGCAAGCAGGGACAGAAAG...CTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CCA 90 bp ACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGTCACACAAAGGTTGGTaGAGACGGGGCCAGGACATG +
Preference number: 2 (lower is better)
Translates to: TKPYSGKMVMKGSSQTCTSHKGW*RRGQDM
Trigger: CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGA...CGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCACAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: EMDMRDIFETGGKVQREPQEPPL*ETLRRG
Trigger: TCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTG...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp AGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAAGAGGTAGAGCTCTaGCCAGGAACGCTCTGCCTA +
Preference number: 2 (lower is better)
Translates to: RSAVGVDLTLEMSFQNKTKEVEL*PGTLCL
Trigger: TAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTT...AGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp CTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCATGAGGGACATTTTTaGGACAGGGGGCAAAGTGCA +
Preference number: 2 (lower is better)
Translates to: LLWGWTSPWRCLSRIKLSHEGHF*DRGQSA
Trigger: TGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATG...GCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp GACACAGGCTCATTAAATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTTTGCAGGTCTCCATATaGCCCAGGGAGATAGGTCTC +
Preference number: 2 (lower is better)
Translates to: DTGSLNSFVQKPKGVPPALQVSI*PREIGL
Trigger: GAGACCTATCTCCCTGGGTCATATGGAGACCTGCAA...AGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTATTTAATGAGCCTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp AAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGCAAGCCTGGGTCAGGTaGGTTCTCAGTACTTTTTCA +
Preference number: 2 (lower is better)
Translates to: KLGNFYLRSAVGVDLTLEQAWVR*VLSTFS
Trigger: TGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTG...CTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGACTCTGCGGAAGGCAATaGCGTTTTGGGTGTTCAGCC +
Preference number: 2 (lower is better)
Translates to: VDLTLEMSFQNKTKPYSGLCGRQ*RFGCSA
Trigger: GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAG...TCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATG +
Preference number: 2 (lower is better)
Translates to: VFVTQRLVETGPGHGQFDKYRDL*SLRKAM
Trigger: CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTT...ATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCTGGTGCCAGAGATTTTaGAACCACAAGAGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: KAAHRHARLIILLKREELWCQRF*NHKSRP
Trigger: GGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCA...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGACAGTGGAGAAGCTGCTaGCAGTTCTGTGGGGCGCAG +
Preference number: 2 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGQWRSC*QFCGAQ
Trigger: CTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp TCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGACTCAGGGGAGTATCTaGCTAAGGACCAAGGAGACA +
Preference number: 2 (lower is better)
Translates to: SAVGVDLTLEMSFQNKTKTQGSI*LRTKET
Trigger: TGTCTCCTTGGTCCTTAGGCAGATACTCCCCTGAGT...CTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCGGGTCCTCGGTGTCCTaGTATCCCAGGTTCACCTTT +
Preference number: 2 (lower is better)
Translates to: KAAHRHARLIILLKREELGSSVS*YPRFTF
Trigger: AAAGGTGAACCTGGGATAGCAGGACACCGAGGACCC...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR GCA 90 bp GCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAATTTTCCCCTTTCTGTCCCTaGTTGCCTCGTTTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: ASYKNPRVSLQLVKIGQFSPFCP*LPRFPG
Trigger: ACCAGGAAAACGAGGCAAGCAGGGACAGAAAGGGGA...AAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCTTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: KAAHRHARLIILLKREELLSHKG*WRRGQD
Trigger: GTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAA...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCACATCCACGTCAGGCTaGGCTGGGCTGTGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGTSTSG*AGLWPV
Trigger: GACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGT...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATCAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNQEPPL*ETLRRG
Trigger: TCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTG...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAAAGAGGTAGAGCTCTaGCCAGGAACGCTCTGCCTA +
Preference number: 2 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNKEVEL*PGTLCL
Trigger: TAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTT...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp CTATCCCAGGTTCACCTTTTGGACCCATTTCACCTTTCTGCCCCAACATTCCAGAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATG +
Preference number: 2 (lower is better)
Translates to: LSQVHLLDPFHLSAPTFQKYRDL*SLRKAM
Trigger: CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTT...CTGGAATGTTGGGGCAGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CCA 90 bp GACACAGGCTCATTAAATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTACAAAGACATCTTCCTaGAGGCCCGGGAAATCCTCT +
Preference number: 2 (lower is better)
Translates to: DTGSLNSFVQKPKGVPPATKTSS*RPGKSS
Trigger: AGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGT...AGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTATTTAATGAGCCTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR CAA 90 bp ACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTaGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGT +
Preference number: 2 (lower is better)
Translates to: TELTACLSSRNLSLF*SHKGWWRRGQDMAS
Trigger: ACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCACGCCACCCTCAGGTTaGTGTCACCTGTGGGAGACC +
Preference number: 2 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGTPPSG*CHLWET
Trigger: GGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGT...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp GATGCAGTGGTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTTTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: DAVVLNSSSQTELTACLSLSHKG*WRRGQD
Trigger: GTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAA...ACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGACCACTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CAA 90 bp TTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTaGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: LGNFYLRSAVGVDLT*EMSFQNKTKPYSGK
Trigger: TTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGACTTGCCTCGTTTTCCTaGTCTTCCTGTGGGTCCTCG +
Preference number: 2 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGLASFS*SSCGSS
Trigger: CGAGGACCCACAGGAAGACCAGGAAAACGAGGCAAG...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR GCA 90 bp TCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGGGCAGCTCACAGACATaGACGACTAATAATCTTATT +
Preference number: 2 (lower is better)
Translates to: SAVGVDLTLEMSFQNKTKGSSQT*TTNNLI
Trigger: AATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCC...CTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CCA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAAAGAGGTAGAGCTCTaGCCAGGAACGCTCTGCCTA +
Preference number: 2 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGKEVEL*PGTLCL
Trigger: TAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTT...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR TCA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCCATGAGGGACATTTTTaGGACAGGGGGCAAAGTGCA +
Preference number: 2 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGHEGHF*DRGQSA
Trigger: TGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATG...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR GCA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAATGTAGCAGTACTGGGTaGATTGCAGGTCTCCATATG +
Preference number: 2 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIECSSTG*IAGLHM
Trigger: CATATGGAGACCTGCAATGCACCCAGTACTGCTACA...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR TCA 72 bp CCTAGAGAGACCCGACAGCGGGCTGCCCAGTGTGAGTaGGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGA +
Preference number: 3 (lower is better)
Translates to: PRETRQRAAQCE*ECLHVSVVRGG
Trigger: TCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCTGCCCAGGTGTGGGCTaGTGCAGGTCACACAGTCCT +
Preference number: 3 (lower is better)
Translates to: GRALARNALPRESPLQLACPGVG*CRSHSP
Trigger: AGGACTGTGTGACCTGCACAAGCCCACACCTGGGCA...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCGACGCCACCCTCAGGTaGATGTCACCTGTGGGAGAC +
Preference number: 3 (lower is better)
Translates to: GRALARNALPRESPLQLADATLR*MSPVGD
Trigger: GTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTC...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTTTGTCACACAAAGGTaGGTGGAGACGGGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPFVTQR*VETGPG
Trigger: TCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAA...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGACCCCGGACGGCCAGGTaGACCAGAAGGCCCAGGCTT +
Preference number: 3 (lower is better)
Translates to: AHVPVSKDATLRLMSPVGPRTAR*TRRPRL
Trigger: AAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGG...TCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR TCA 72 bp GGCCAGTCGAGGGGTCCTTTGGCAGGTTCAAAGCTGTaGGCCACCCCGAGAGAACGTGCCCACTTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: GQSRGPLAGSKL*ATPRERAHFPA
Trigger: AGCAGGGAAGTGGGCACGTTCTCTCGGGGTGGCTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 72 bp GCCACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTaGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTG +
Preference number: 3 (lower is better)
Translates to: ATPRERAHFPAL*FIGLERPDSGL
Trigger: CAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCCAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCGGAACAGGTCTCAGGTaGGGCATGTGGAAGGTTTTC +
Preference number: 3 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPGTGLR*GMWKVF
Trigger: GAAAACCTTCCACATGCCCAACCTGAGACCTGTTCC...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp TGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGAGCCCTTGGAGCCCATaGGTCCTCTTGACCCTGGCA +
Preference number: 3 (lower is better)
Translates to: CLRTKETPTACPGVGLCRSPWSP*VLLTLA
Trigger: TGCCAGGGTCAAGAGGACCAATGGGCTCCAAGGGCT...CCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR GCA 72 bp CTGCAGGAGCCCATCCCCACAGGTGCCGTGCTGGTCTaGAGTGTAATCCACAGGGTAGAAAGGGGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: LQEPIPTGAVLV*SVIHRVERGQL
Trigger: CAGCTGACCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR CCA 72 bp CTGCCCAGTGTGAGTGAGAATGCCTGCACGTTTCGGTaGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCC +
Preference number: 3 (lower is better)
Translates to: LPSVSENACTFR*SGAERPVLQIP
Trigger: GGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 72 bp TGTCAGGGGTCAGCAGGAGGCAAAGAGGTAGAGCTCTaGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGC +
Preference number: 3 (lower is better)
Translates to: CQGSAGGKEVEL*PGTLCLERALC
Trigger: GCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGACCCCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 72 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTCCTCACGGCCCTCAGG +
Preference number: 3 (lower is better)
Translates to: SLMTVEKLLPVL*GAAHLLLTALR
Trigger: CCTGAGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp CAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGTGCCCAGGTGTGGGCTaGTGCAGGTCACACAGTCCT +
Preference number: 3 (lower is better)
Translates to: QRGRALARNALPRESPLQCPGVG*CRSHSP
Trigger: AGGACTGTGTGACCTGCACAAGCCCACACCTGGGCA...CTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 72 bp GCTGTGAGCCACCCCGAGAGAACGTGCCCACTTCCCTaGTTTGTGGTTCATAGGCCTAGAGAGACCCGACAG +
Preference number: 3 (lower is better)
Translates to: AVSHPERTCPLP*FVVHRPRETRQ
Trigger: CTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTGGCTCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp AACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTGGGGCAAGCCTGGGTCTTCTCTAGCCTCTGCTaGGGGCAAGCCTGGGTCAGG +
Preference number: 3 (lower is better)
Translates to: NTEKRSLFSSLCLGQAWVFSSLC*GQAWVR
Trigger: CCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAA...GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTAGCTCCTCCTGGTTGTaGACCACAAAAATCACAGGA +
Preference number: 3 (lower is better)
Translates to: GEAAASSVGRSPPSPHGPSSSWL*TTKITG
Trigger: TCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCT...AGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CAA 90 bp CCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCCAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: PLPCFVVHRPRETRQRAAQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GGGAGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCGAAGGCAATGGCGTTTaGGGTGTTCAGCCTCTCAAG +
Preference number: 3 (lower is better)
Translates to: GSICLRTKETPTACPGVGEGNGV*GVQPLK
Trigger: CTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTC...GCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR TCA 72 bp CCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTTaGTGTCACCTGTGGGAGACCGGGTCCACCTACAGA +
Preference number: 3 (lower is better)
Translates to: PMCLSLKTPPSG*CHLWETGSTYR
Trigger: TCTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 72 bp AAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTaGAGGTCACACAGTCCTCATGAGTCTCCTGGACAG +
Preference number: 3 (lower is better)
Translates to: KETPTACPGVGL*RSHSPHESPGQ
Trigger: CTGTCCAGGAGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTAATCCTCTTTCCCCTTaGGGTCCCATTATAAGTTGT +
Preference number: 3 (lower is better)
Translates to: GEAAASSVGRSPPSPHGPNPLSP*GPIISC
Trigger: ACAACTTATAATGGGACCCAAAGGGGAAAGAGGATT...AGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR GCA 72 bp GGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTaGTTGGGGCAAGCCTGGGTCAGGTGGGTTCTCAGT +
Preference number: 3 (lower is better)
Translates to: GNTEKRSLFSSL*LGQAWVRWVLS
Trigger: ACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 72 bp AGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTaGCCAGGTGTGGGCTTGTGCAGGTCACACAGTCCT +
Preference number: 3 (lower is better)
Translates to: SICLRTKETPTA*PGVGLCRSHSP
Trigger: AGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCCTTAGTAGCAGGAATTaGTCCTTGTTTTTGTCACAC +
Preference number: 3 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPLSSRN*SLFLSH
Trigger: GTGTGACAAAAACAAGGACAAATTCCTGCTACTAAG...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
3UTR CCA 72 bp ACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTaGGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACTT +
Preference number: 3 (lower is better)
Translates to: TLRRGASSLASA*GKPGSGGFSVL
Trigger: AAGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 72 bp TCGTTTTCCTGGTCTTCCTGTGGGTCCTCGGTGTCCTaGTATCCCAGGTTCACCTTTTGGACCCATTTCACC +
Preference number: 3 (lower is better)
Translates to: SFSWSSCGSSVS*YPRFTFWTHFT
Trigger: GGTGAAATGGGTCCAAAAGGTGAACCTGGGATAGCAGGACACCGAGGACCCACAGGAAGACCAGGAAAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR CCA 72 bp AGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATGGCGTTTTGGGTGTTC +
Preference number: 3 (lower is better)
Translates to: SQPRLSLKYRDL*SLRKAMAFWVF
Trigger: GAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR CCA 72 bp AGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTTaGGTGTTCAGCCTCTCAAGCTCCTCCTGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: RDLWSLRKAMAF*VFSLSSSSWLL
Trigger: CAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CAA 90 bp CGGCCCTCAGGTGAAGTAGCGGCAGGGCGTGGAGTCGATGTAGCAGTACTGGGTCTTAGTAGCAGGAATTaGTCCTTGTTTTTGTCACAC +
Preference number: 3 (lower is better)
Translates to: RPSGEVAAGRGVDVAVLGLSSRN*SLFLSH
Trigger: GTGTGACAAAAACAAGGACAAATTCCTGCTACTAAG...ACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGAGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR TCA 72 bp GTCTCCTGGACAGGAAATGGACATGAGGGACATTTTTaGGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: VSWTGNGHEGHF*DRGQSAERAKR
Trigger: CCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTCCTGTCCAGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR TCA 72 bp GTCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTaGGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGA +
Preference number: 3 (lower is better)
Translates to: VPPAGKNWAIST*GLLWGWTSPWR
Trigger: TCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 72 bp GTGCCAGAGATTTTGAAACCACAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCC +
Preference number: 3 (lower is better)
Translates to: VPEILKPQEPPL*ETLRRGASSLA
Trigger: GGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 72 bp ATGGCGTTTTGGGTGTTCAGCCTCTCAAGCTCCTCCTaGTTGTTGACCACAAAAATCACAGGAACTCGCGGG +
Preference number: 3 (lower is better)
Translates to: MAFWVFSLSSSS*LLTTKITGTRG
Trigger: CCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAACGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CAA 90 bp CCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCCTTAGTAGCAGGAATTaGTCCTTGTTTTTGTCACAC +
Preference number: 3 (lower is better)
Translates to: PLPCFVVHRPRETRQRAALSSRN*SLFLSH
Trigger: GTGTGACAAAAACAAGGACAAATTCCTGCTACTAAG...GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp CTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTGCCCACTTCCCTGCTTaGTGGTTCATAGGCCTAGAG +
Preference number: 3 (lower is better)
Translates to: LWGWTSPWRCLSRIKLSPAHFPA*WFIGLE
Trigger: CTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGC...AGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAACAAGAGCCGCCCCTTaGGGAAACACTGAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: EMDMRDIFETGGKVQREPTRAAP*GNTEKR
Trigger: CCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGT...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCACAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: EMDMRDIFETGGKVQREPQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GCATGTCAGGTAGCCAAAGTCAGAGCCGTCACAGTCCTCCACACCCTCATGCCGAATTTGTCCTTGTTTTaGTCACACAAAGGTTGGTGG +
Preference number: 3 (lower is better)
Translates to: ACQVAKVRAVTVLHTLMPNLSLF*SHKGWW
Trigger: CCACCAACCTTTGTGTGACAAAAACAAGGACAAATT...CGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTTGGCTACCTGACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp CCACAAGAGCCGCCCCTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCAATTTGTCCTTGTTTTaGTCACACAAAGGTTGGTGG +
Preference number: 3 (lower is better)
Translates to: PQEPPLWETLRRGASSLANLSLF*SHKGWW
Trigger: CCACCAACCTTTGTGTGACAAAAACAAGGACAAATT...GGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAATTTGCCCACTTCCCTGCTTaGTGGTTCATAGGCCTAGAG +
Preference number: 3 (lower is better)
Translates to: ASYKNPRVSLQLVKIGQFAHFPA*WFIGLE
Trigger: CTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGC...AAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CCA 72 bp AGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGACATGGCCAGTTTGATG +
Preference number: 3 (lower is better)
Translates to: SRNLSLFLSHKG*WRRGQDMASLM
Trigger: CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp AGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGAGCAGGAATTTGTCCTaGTTTTTGTCACACAAAGGT +
Preference number: 3 (lower is better)
Translates to: RTCPLPCFVVHRPRETRQSRNLS*FLSHKG
Trigger: ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCT...CTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 72 bp CAGCTGGTAAAAATTGGGCAATTTCTACTTGAGGTCTaGTGTGGGGGTGGACCTCACCTTGGAGATGTCTTT +
Preference number: 3 (lower is better)
Translates to: QLVKIGQFLLEV*CGGGPHLGDVF
Trigger: AAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCGGAACAGGTCTCAGGTaGGGCATGTGGAAGGTTTTC +
Preference number: 3 (lower is better)
Translates to: KAAHRHARLIILLKREELGTGLR*GMWKVF
Trigger: GAAAACCTTCCACATGCCCAACCTGAGACCTGTTCC...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp TGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAATTGGGCAATTTCTACTaGAGGTCTGCTGTGGGGGTG +
Preference number: 3 (lower is better)
Translates to: WTSPWRCLSRIKLSPTQELGNFY*RSAVGV
Trigger: CACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAA...TTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp TGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTTCCCAGGTTCACCTTTaGGACCCATTTCACCTTTCT +
Preference number: 3 (lower is better)
Translates to: WGWTSPWRCLSRIKLSPTSQVHL*DPFHLS
Trigger: AGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGA...AGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR-3UTR CAA 90 bp GACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGTAGCAGGAATTTGTCCTaGTTTTTGTCACACAAAGGT +
Preference number: 3 (lower is better)
Translates to: DMRDIFETGGKVQREPRGSRNLS*FLSHKG
Trigger: ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCT...ACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCCCACTTCCCTGCTTaGTGGTTCATAGGCCTAGAG +
Preference number: 3 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGAHFPA*WFIGLE
Trigger: CTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGC...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCACTTAGTAGCAGGAATTaGTCCTTGTTTTTGTCACAC +
Preference number: 3 (lower is better)
Translates to: EMDMRDIFETGGKVQREPLSSRN*SLFLSH
Trigger: GTGTGACAAAAACAAGGACAAATTCCTGCTACTAAG...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCCAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAGGAACAGGTCTCAGGTaGGGCATGTGGAAGGTTTTC +
Preference number: 3 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIEGTGLR*GMWKVF
Trigger: GAAAACCTTCCACATGCCCAACCTGAGACCTGTTCC...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR GCA 72 bp TCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATaGACGACTAATAATCTTATTGAAAAGGGAGGAGCT +
Preference number: 3 (lower is better)
Translates to: SGKMVMKGSSQT*TTNNLIEKGGA
Trigger: AGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR-3UTR CAA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCCGACTAATAATCTTATaGAAAAGGGAGGAGCTCAGG +
Preference number: 3 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGRLIIL*KREELR
Trigger: CCTGAGCTCCTCCCTTTTCAATAAGATTATTAGTCG...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCCCGGACGGCCAGGTTaGCCAGAAGGCCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTAPGRPG*PEGPGL
Trigger: CAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGG...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCCACTCCTCCCCAGGCTaGAGGAGCCCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPHSSPG*RSPSPQ
Trigger: CTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTG...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGCCCGGACGGCCAGGTTaGCCAGAAGGCCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTPGRPG*PEGPGL
Trigger: CAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGG...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGCTCACGGCCCTCAGGTaGAGTAGCGGCAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTLTALR*SSGRAW
Trigger: CCACGCCCTGCCGCTACTTCACCTGAGGGCCGTGAG...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGGGCCTGGCCAACCGATaGGCCCAGGCATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRGLANR*AQACQE
Trigger: TTCCTGGCATGCCTGGGCCCATCGGTTGGCCAGGCC...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCCACCACGCTTCTTCTaGTCCAGGCTGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTAPPRFF*SRLGRA
Trigger: AGCCCTTCCCAGCCTGGATCAGAAGAAGCGTGGTGG...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCGCCCATCCCCACAGGTaGCGTGCTGGTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGAHPHR*RAGLQC
Trigger: ACACTGCAGACCAGCACGGCACCTGTGGGGATGGGC...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGCACTCCTCCCCAGGCTaGAGGAGCCCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTHSSPG*RSPSPQ
Trigger: CTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTG...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCCACGGTGACAGCGGATaGAGTCGTCACCCACATCGC +
Preference number: 4 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPHGDSG*SRHPHR
Trigger: GCGATGTGGGTGACGACTGCATCCGCTGTCACCGTG...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTAGCGAGCCTTGCATaGACGGGGACTGCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTALASLA*TGTARS
Trigger: AGACCTCGCAGTCCCCGTGCATGCAAGGCTCGCTAG...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCGCCAGGAAGCCCCGGTaGACCCGGACTTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSARKPR*TRTSAT
Trigger: GGTGGCCGAAGTCCGGGTCCACCGGGGCTTCCTGGC...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383786.9
CDS-3UTR CCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCATGCCAGGAACACCTaGGGGGCCAGGTCTACCCTT +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTAHARNT*GARSTL
Trigger: AAGGGTAGACCTGGCCCCCCAGGTGTTCCTGGCATG...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCAAGGGGTCAGCTGGATaGGGAGCCAGCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPKGSAG*GASQGC
Trigger: ACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTT...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCACCACGCTTCTTCTaGTCCAGGCTGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGPPRFF*SRLGRA
Trigger: AGCCCTTCCCAGCCTGGATCAGAAGAAGCGTGGTGG...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTCCCGGACGGCCAGGTTaGCCAGAAGGCCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPPGRPG*PEGPGL
Trigger: CAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGG...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCTCACGGCCCTCAGGTaGAGTAGCGGCAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: MASLMTVEKLLPVLWGAALTALR*SSGRAW
Trigger: CCACGCCCTGCCGCTACTTCACCTGAGGGCCGTGAG...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGCCCATCCCCACAGGTaGCGTGCTGGTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHAHPHR*RAGLQC
Trigger: ACACTGCAGACCAGCACGGCACCTGTGGGGATGGGC...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCCACTCCTCCCCAGGCTaGAGGAGCCCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLHSSPG*RSPSPQ
Trigger: CTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTG...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCATGCCAGGAACACCTaGGGGGCCAGGTCTACCCTT +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRHARNT*GARSTL
Trigger: AAGGGTAGACCTGGCCCCCCAGGTGTTCCTGGCATG...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACGGCCTGGCCAACCGATaGGCCCAGGCATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RTKETPTACPGVGLCRSHGLANR*AQACQE
Trigger: TTCCTGGCATGCCTGGGCCCATCGGTTGGCCAGGCC...GTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCAGGCCTGGCCAACCGATaGGCCCAGGCATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPGLANR*AQACQE
Trigger: TTCCTGGCATGCCTGGGCCCATCGGTTGGCCAGGCC...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGGAGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCGGCCTGGCCAACCGATaGGCCCAGGCATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GSICLRTKETPTACPGVGGLANR*AQACQE
Trigger: TTCCTGGCATGCCTGGGCCCATCGGTTGGCCAGGCC...GCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGAGGCCCAGGCTTGCCTaGTGGGCCCATAACTCCACT +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRRPRLA*WAHNST
Trigger: AGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCT...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCGAACTCGCGGGGAACTaGGCCCATACACAGATTCCC +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTAELAGN*AHTQIP
Trigger: GGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTC...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CCA 90 bp GGGAGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCGCCTGCACGTTTCGGTaGTCAGGGGCGGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GSICLRTKETPTACPGVGACTFR*SGAERP
Trigger: AGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGC...GCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGGCCCAGCCTGCCCAGGTGTaGGCTTGTGCAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: HLWETGSTYRHQVMVHQAQPAQV*ACAGHT
Trigger: TGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTG...GGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCACTCACGGCCCTCAGGTaGAGTAGCGGCAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGALTALR*SSGRAW
Trigger: CCACGCCCTGCCGCTACTTCACCTGAGGGCCGTGAG...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCACGGCCCTCAGGTaGAGTAGCGGCAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLLTALR*SSGRAW
Trigger: CCACGCCCTGCCGCTACTTCACCTGAGGGCCGTGAG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCACCACGCTTCTTCTaGTCCAGGCTGGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPPPRFF*SRLGRA
Trigger: GGCCCTTCCCAGCCTGGATCAGAAGAAGCGTGGTGG...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR TCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGGCTGCCCAGTGTGAGTaGGAATGCCTGCACGTTTCG +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRAAQCE*ECLHVS
Trigger: CGAAACGTGCAGGCATTCTCACTCACACTGGGCAGC...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCGCGGGCTGCCCAGTGTaGGTGAGAATGCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLAGCPV*VRMPAR
Trigger: ACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGC...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCGTCAGCAGGCAGCATaGTTTGTGGCCACCACGCTT +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRRQQAA*FVATTL
Trigger: AAGCGTGGTGGCCACAAAGCATGCTGCCTGCTGACG...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGCACGGTGACAGCGGATaGAGTCGTCACCCACATCGC +
Preference number: 4 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTHGDSG*SRHPHR
Trigger: GCGATGTGGGTGACGACTGCATCCGCTGTCACCGTG...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGCTAGCGAGCCTTGCATaGACGGGGACTGCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTLASLA*TGTARS
Trigger: AGACCTCGCAGTCCCCGTGCATGCAAGGCTCGCTAG...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAAGAGCCTAGCGAGCCTTaGATGCACGGGGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: PARFGGQGRRGLYSRFPKEPSEP*MHGDCE
Trigger: CTCGCAGTCCCCGTGCATGCAAGGCTCGCTAGGCTC...TTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGGCCCTCTTCTCTAGCCTCTaGTTGGGGCAAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HLWETGSTYRHQVMVHQALFSSL*LGQAWV
Trigger: GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAG...GGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCGGTGACAGTCACGGATaGAGTCGTCACCCACATCGC +
Preference number: 4 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGGDSHG*SRHPHR
Trigger: GCGATGTGGGTGACGACTGCATCCGTGACTGTCACC...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603808.5
CDS-3UTR CCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCGCCACCTCTGAAGAATaGTGGTGGGAACAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTAATSEE*WWEQWW
Trigger: CCACCACTGTTCCCACCACCATTCTTCAGAGGTGGC...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCTCTACCCTTCCTTCCTaGTCGGCCAAGCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGSTLPS*SAKLPL
Trigger: AAGGGGGAGCTTGGCCGACCAGGAAGGAAGGGTAGA...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCGGCCTGGCCAACCGATaGGCCCAGGCATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: MASLMTVEKLLPVLWGAAGLANR*AQACQE
Trigger: TTCCTGGCATGCCTGGGCCCATCGGTTGGCCAGGCC...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCATCCAGGGTAGCCCTTaGAGCCCATTGGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTAIQGSP*SPLVLL
Trigger: CAAGAGGACCAATGGGCTCCAAGGGCTACCCTGGAT...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACAGGCCCAGGCTTGCCTaGTGGGCCCATAACTCCACT +
Preference number: 4 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHRPRLA*WAHNST
Trigger: AGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCT...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCGAACTCGCGGGGAACTaGGCCCATACACAGATTCCC +
Preference number: 4 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGELAGN*AHTQIP
Trigger: GGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTC...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCGAACTCGCGGGGAACTaGGCCCATACACAGATTCCC +
Preference number: 4 (lower is better)
Translates to: GRALARNALPRESPLQLAELAGN*AHTQIP
Trigger: GGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTC...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTCTGCGGAAGGCAATaGCGTTTTGGGTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTALCGRQ*RFGCSA
Trigger: GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAG...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCCTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLLLPVL*GAAHLL
Trigger: GAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAG...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPLLPVL*GAAHLL
Trigger: GAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAG...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTGTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTAGGGCCCAAAGCGGACTaGCCAGGGAACACTAGCCGG +
Preference number: 4 (lower is better)
Translates to: SVSENACTFRWSGAERPVGPKAD*PGNTSR
Trigger: CCGGCTAGTGTTCCCTGGCCAGTCCGCTTTGGGCCC...TACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CCA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTGCCTGCACGTTTCGGTaGTCAGGGGCGGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPACTFR*SGAERP
Trigger: AGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGC...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GACAGCGGATGCAGTCGTCACCCACATCGCTGTTACCGTCGTCACACTCCTCCCACATCCACGTCAGGCTaGGCTGGGCTGTGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: DSGCSRHPHRCYRRHTPPTSTSG*AGLWPV
Trigger: GACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGT...GGGAGGAGTGTGACGACGGTAACAGCGATGTGGGTGACGACTGCATCCGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCGACTTCGGCCACCTCTaGAGAATGGTGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: GRALARNALPRESPLQLADFGHL*RMVVGT
Trigger: TGTTCCCACCACCATTCTTCAGAGGTGGCCGAAGTC...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCGACTTCGGCCACCTCTaGAGAATGGTGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGDFGHL*RMVVGT
Trigger: TGTTCCCACCACCATTCTTCAGAGGTGGCCGAAGTC...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGGACGGCCAGGTTaGCCAGAAGGCCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TPRERAHFPALWFIGLERPGRPG*PEGPGL
Trigger: CAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGG...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GCATGTCAGGTAGCCAAAGTCAGAGCCGTCACAGTCCTCCACACCCTCATGCCGGCGGGCTGCCCAGTGTaGGTGAGAATGCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: ACQVAKVRAVTVLHTLMPAGCPV*VRMPAR
Trigger: ACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGC...CGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTTGGCTACCTGACATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCTGGGCAATTTCTACTTaGGGTCTGCTGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRALARNALPRESPLQLAWAIST*GLLWGW
Trigger: CCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCA...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAACAAGCTCCAGCCTGCTaGGTCCCCAAGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: PARFGGQGRRGLYSRFPKQAPAC*VPKTQA
Trigger: AGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTG...TTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGATTCAGGACAACCATaGTGGCCAGGGTCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHDSGQP*WPGSGE
Trigger: CTCGCCAGACCCTGGCCAGCATGGTTGTCCTGAATC...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACCGTCAGCAGGCAGCATaGTTTGTGGCCACCACGCTT +
Preference number: 4 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHRQQAA*FVATTL
Trigger: AAGCGTGGTGGCCACAAAGCATGCTGCCTGCTGACG...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGGGTGCCGTGCTGGTCTaGAGTGTAATCCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRGAVLV*SVIHRV
Trigger: TACCCTGTGGATTACACTGCAGACCAGCACGGCACC...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCACACTCCTCCCCAGGCTaGAGGAGCCCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGAHSSPG*RSPSPQ
Trigger: CTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTG...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CCACAAGAGCCGCCCCTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCCACTCCTCCCCAGGCTaGAGGAGCCCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: PQEPPLWETLRRGASSLAHSSPG*RSPSPQ
Trigger: CTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTG...GGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GGGAGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCCAGTGGAGAAGCTGCTaGCAGTTCTGTGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GSICLRTKETPTACPGVGQWRSC*QFCGAQ
Trigger: CTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG...GCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGCTAGCGAGCCTTGCATaGACGGGGACTGCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: CLRTKETPTACPGVGLCRLASLA*TGTARS
Trigger: AGACCTCGCAGTCCCCGTGCATGCAAGGCTCGCTAG...CCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGGCCGTGAGTGAGAATGCCTaGACGTTTCGGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HLWETGSTYRHQVMVHQAVSENA*TFRWSG
Trigger: CCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC...GGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCACGTGCCCACTTCCCTaGTTTGTGGTTCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPTCPLP*FVVHRP
Trigger: AGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGT...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCTCAGGACAACCATGCTaGCCAGGGTCTGGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLSGQPC*PGSGEG
Trigger: ACCCTCGCCAGACCCTGGCCAGCATGGTTGTCCTGA...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCTCAGGACAACCATGCTaGCCAGGGTCTGGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: VSENACTFRWSGAERPVLSGQPC*PGSGEG
Trigger: ACCCTCGCCAGACCCTGGCCAGCATGGTTGTCCTGA...GAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCTCTTCTGATCCAGGCTaGGAAGGGCTGCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTASSDPG*EGLLRL
Trigger: CAATCTCAGCAGCCCTTCCCAGCCTGGATCAGAAGA...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCGCCACCTCTGAAGAATaGTGGTGGGAACAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGATSEE*WWEQWW
Trigger: CCACCACTGTTCCCACCACCATTCTTCAGAGGTGGC...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCCACCTTTTTCACCCCTaGGTCCTTCAGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLHLFHP*VLQGLA
Trigger: GGCCAGGCCCTGAAGGACCCAGGGGTGAAAAAGGTG...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACCTTTTTCACCCCTaGGTCCTTCAGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DDSGEAAASSVGRSPPSPHLFHP*VLQGLA
Trigger: GGCCAGGCCCTGAAGGACCCAGGGGTGAAAAAGGTG...AGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGAGGCCCAGGCTTGCCTaGTGGGCCCATAACTCCACT +
Preference number: 4 (lower is better)
Translates to: CLRTKETPTACPGVGLCRRPRLA*WAHNST
Trigger: AGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCT...CCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCTCTGCGGAAGGCAATaGCGTTTTGGGTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRLCGRQ*RFGCSA
Trigger: GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAG...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGAAGGGGTCAGCTGGATaGGGAGCCAGCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CLRTKETPTACPGVGLCRKGSAG*GASQGC
Trigger: ACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTT...CCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGTCACACAAAGGTTGGTaGAGACGGGGCCAGGACATG +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRSHKGW*RRGQDM
Trigger: CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGA...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGTTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRLSHKG*WRRGQD
Trigger: GTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAA...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CCACAAGAGCCGCCCCTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCGCCTGCACGTTTCGGTaGTCAGGGGCGGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PQEPPLWETLRRGASSLAACTFR*SGAERP
Trigger: AGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGC...GGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCACGCTTCTTCTaGTCCAGGCTGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSPPRFF*SRLGRA
Trigger: AGCCCTTCCCAGCCTGGATCAGAAGAAGCGTGGTGG...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCCACCACGCTTCTTCTaGTCCAGGCTGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: MASLMTVEKLLPVLWGAAPPRFF*SRLGRA
Trigger: AGCCCTTCCCAGCCTGGATCAGAAGAAGCGTGGTGG...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGTTGCAGGTCTCCATATaGCCCAGGGAGATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRLQVSI*PREIGL
Trigger: GAGACCTATCTCCCTGGGTCATATGGAGACCTGCAA...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCTCTCCAGTTCCAGCATaGGATTCTTCATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTASPVPA*DSSCLG
Trigger: CCCCAGACATGAAGAATCTCATGCTGGAACTGGAGA...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000681097.1
CDS-3UTR TCA 90 bp CGGCCCTCAGGTGAAGTAGCGGCAGGGCGTGGAGTCGATGTAGCAGTACTGGGTTGGGCAATTTCTACTTaGGGTCTGCTGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RPSGEVAAGRGVDVAVLGWAIST*GLLWGW
Trigger: CCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCA...ACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGAGGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCTTCCTCACTGCTGTTTaGGTGCGCGTGTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTAFLTAV*VRVCLC
Trigger: ACACAAACACACGCGCACGCAAACAGCAGTGAGGAA...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383786.9
ENST00000603808.5
CDS-3UTR GCA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCGCTGCTGCGGAGCCTTaGTTATCTCTGCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPAAAEP*LSLLFS
Trigger: AGAGAAAAGCAGAGATAAGCAAGGCTCCGCAGCAGC...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAAGATTCAGGACAACCATaGTGGCCAGGGTCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PARFGGQGRRGLYSRFPKDSGQP*WPGSGE
Trigger: CTCGCCAGACCCTGGCCAGCATGGTTGTCCTGAATC...TTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGGGTCCTCGGTGTCCTaGTATCCCAGGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTGSSVS*YPRFTF
Trigger: AAAGGTGAACCTGGGATAGCAGGACACCGAGGACCC...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCTCCCCTTTCTGTCCCTaGTTGCCTCGTTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GRALARNALPRESPLQLASPFCP*LPRFPG
Trigger: ACCAGGAAAACGAGGCAAGCAGGGACAGAAAGGGGA...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGGTGCCGTGCTGGTCTaGAGTGTAATCCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTGAVLV*SVIHRV
Trigger: TACCCTGTGGATTACACTGCAGACCAGCACGGCACC...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCATCCCCACAGGTaGCGTGCTGGTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGAAHPHR*RAGLQC
Trigger: ACACTGCAGACCAGCACGGCACCTGTGGGGATGGGC...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCACGGTGACAGCGGATaGAGTCGTCACCCACATCGC +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSHGDSG*SRHPHR
Trigger: GCGATGTGGGTGACGACTGCATCCGCTGTCACCGTG...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCAGTACTGGGTGCATTaGAGGTCTCCATATGACCCA +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTAQYWVH*RSPYDP
Trigger: TGGGTCATATGGAGACCTGCAATGCACCCAGTACTG...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCCAGTACTGGGTGCATTaGAGGTCTCCATATGACCCA +
Preference number: 4 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPQYWVH*RSPYDP
Trigger: TGGGTCATATGGAGACCTGCAATGCACCCAGTACTG...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCAGTGGAGAAGCTGCTaGCAGTTCTGTGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: MASLMTVEKLLPVLWGAAQWRSC*QFCGAQ
Trigger: CTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAACTCTTCTCTAGCCTCTaGTTGGGGCAAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PARFGGQGRRGLYSRFPKLFSSL*LGQAWV
Trigger: GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAG...TTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTTGGCCAGGAACGCTCTaGCTAGAGAGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ENACTFRWSGAERPVLQIWPGTL*LERALC
Trigger: GCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCA...AATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCTGGCCAGGAACGCTCTaGCTAGAGAGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: MASLMTVEKLLPVLWGAAWPGTL*LERALC
Trigger: GCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCA...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCTTTCTACTTGAGGTCTaGTGTGGGGGTGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: GRALARNALPRESPLQLAFLLEV*CGGGPH
Trigger: GTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAA...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCTGGTGGGAACAGTGGTaGTGGAGGAGGCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GHGQFDDSGEAAASSVGRWWEQW*WRRRQQ
Trigger: CTGCTGACGCCTCCTCCACCACCACTGTTCCCACCA...GCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTTGGTGGGAACAGTGGTaGTGGAGGAGGCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ENACTFRWSGAERPVLQIWWEQW*WRRRQQ
Trigger: CTGCTGACGCCTCCTCCACCACCACTGTTCCCACCA...AATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGAGACCGGGTCCACCTACAGTGGTGGGAACAGTGGTaGTGGAGGAGGCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KDATLRLMSPVGDRVHLQWWEQW*WRRRQQ
Trigger: CTGCTGACGCCTCCTCCACCACCACTGTTCCCACCA...CTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCATCTACCCTTCCTTCCTaGTCGGCCAAGCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPSTLPS*SAKLPL
Trigger: AAGGGGGAGCTTGGCCGACCAGGAAGGAAGGGTAGA...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTGTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACATGCCAGGAACACCTaGGGGGCCAGGTCTACCCTT +
Preference number: 4 (lower is better)
Translates to: SVSENACTFRWSGAERPVHARNT*GARSTL
Trigger: AAGGGTAGACCTGGCCCCCCAGGTGTTCCTGGCATG...TACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCCACCTTTTTCACCCCTaGGTCCTTCAGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GHGQFDDSGEAAASSVGRHLFHP*VLQGLA
Trigger: GGCCAGGCCCTGAAGGACCCAGGGGTGAAAAAGGTG...GCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTCACCTTTTTCACCCCTaGGTCCTTCAGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPHLFHP*VLQGLA
Trigger: GGCCAGGCCCTGAAGGACCCAGGGGTGAAAAAGGTG...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGATCCCTTTTCCCCTCTaGATCCAGGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTIPFPL*IQGSPW
Trigger: CCAAGGGCTACCCTGGATCCAGAGGGGAAAAGGGAT...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGTTCCTGGTCTTCCTGTaGGTCCTCGGTGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTFLVFL*VLGVLL
Trigger: TAGCAGGACACCGAGGACCCACAGGAAGACCAGGAA...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CGGCCCTCAGGTGAAGTAGCGGCAGGGCGTGGAGTCGATGTAGCAGTACTGGGTTTCCTGGTCTTCCTGTaGGTCCTCGGTGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: RPSGEVAAGRGVDVAVLGFLVFL*VLGVLL
Trigger: TAGCAGGACACCGAGGACCCACAGGAAGACCAGGAA...ACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGAGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAACCCAGGCTTGCCTGGTaGGCCCATAACTCCACTATC +
Preference number: 4 (lower is better)
Translates to: PARFGGQGRRGLYSRFPKPRLAW*AHNSTI
Trigger: GATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGG...TTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTAGGCCCAGGCTTGCCTaGTGGGCCCATAACTCCACT +
Preference number: 4 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPRPRLA*WAHNST
Trigger: AGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCT...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCAAGGGGTCAGCTGGATaGGGAGCCAGCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSKGSAG*GASQGC
Trigger: ACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTT...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACTTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHLSHKG*WRRGQD
Trigger: GTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAA...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCCAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRALARNALPRESPLQLAQEPPL*ETLRRG
Trigger: TCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTG...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACGGTCTGCTGTGGGGGTaGACCTCACCTTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RTKETPTACPGVGLCRSHGLLWG*TSPWRC
Trigger: ACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACC...GTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CAA 72 bp GCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTaGATGTCACCTGTGGGAGACCGGGTCCACCTACAG +
Preference number: 4 (lower is better)
Translates to: AHVPVSKDATLR*MSPVGDRVHLQ
Trigger: CTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCGACTTCGGCCACCTCTaGAGAATGGTGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLDFGHL*RMVVGT
Trigger: TGTTCCCACCACCATTCTTCAGAGGTGGCCGAAGTC...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGCCCGGACGGCCAGGTTaGCCAGAAGGCCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMPGRPG*PEGPGL
Trigger: CAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGG...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGTCTCCAGTTCCAGCATaGGATTCTTCATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRSPVPA*DSSCLG
Trigger: CCCCAGACATGAAGAATCTCATGCTGGAACTGGAGA...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000681097.1
CDS-3UTR TCA 90 bp ACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCCAGTGTGAGTaGGAATGCCTGCACGTTTCG +
Preference number: 4 (lower is better)
Translates to: TCPLPCFVVHRPRETRQRAAQCE*ECLHVS
Trigger: CGAAACGTGCAGGCATTCTCACTCACACTGGGCAGC...CCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGAGACCGGGTCCACCTACAGGCAGGTTCAAAGCTGTaGGCCACCCCGAGAGAACGT +
Preference number: 4 (lower is better)
Translates to: KDATLRLMSPVGDRVHLQAGSKL*ATPRER
Trigger: ACGTTCTCTCGGGGTGGCTCACAGCTTTGAACCTGC...CTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATGGTGCCAGAGATTTTaGAACCACAAGAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VRMPARFGGQGRRGLYSRWCQRF*NHKSRP
Trigger: GGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCA...TCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTGGGGCAAGCCTGGGTCCCTACAGACACCAGGTaGTGGTCCACCAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: NTEKRSLFSSLCLGQAWVPTDTR*WSTRPQ
Trigger: TTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGG...GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCACCTACAGACACCAGGTaGTGGTCCACCAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGAPTDTR*WSTRPQ
Trigger: TTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGG...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GGGCCAGGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGACGCCACCCTCAGGTTaGTGTCACCTGTGGGAGACC +
Preference number: 4 (lower is better)
Translates to: GPGHGQFDDSGEAAASSVTPPSG*CHLWET
Trigger: GGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGT...CACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGTTTTCTCTTCCTCACTaGTGTTTGCGTGCGCGTGTG +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRFSLPH*CLRARV
Trigger: CACACGCGCACGCAAACAGCAGTGAGGAAGAGAAAA...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383786.9
ENST00000603808.5
CDS-3UTR GCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCGATTCAGGACAACCATaGTGGCCAGGGTCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: MASLMTVEKLLPVLWGAADSGQP*WPGSGE
Trigger: CTCGCCAGACCCTGGCCAGCATGGTTGTCCTGAATC...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTGATTCAGGACAACCATaGTGGCCAGGGTCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPDSGQP*WPGSGE
Trigger: CTCGCCAGACCCTGGCCAGCATGGTTGTCCTGAATC...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGCGTCAGCAGGCAGCATaGTTTGTGGCCACCACGCTT +
Preference number: 4 (lower is better)
Translates to: VSRRQRGRALARNALPRERQQAA*FVATTL
Trigger: AAGCGTGGTGGCCACAAAGCATGCTGCCTGCTGACG...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCACGGTGACAGCGGATaGAGTCGTCACCCACATCGC +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLHGDSG*SRHPHR
Trigger: GCGATGTGGGTGACGACTGCATCCGCTGTCACCGTG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TCAGGTGAAGTAGCGGCAGGGCGTGGAGTCGATGTAGCAGTACTGGGTGCATTGCAGTGGAGAAGCTGCTaGCAGTTCTGTGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SGEVAAGRGVDVAVLGALQWRSC*QFCGAQ
Trigger: CTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG...CAATGCACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCACTAGCGAGCCTTGCATaGACGGGGACTGCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGALASLA*TGTARS
Trigger: AGACCTCGCAGTCCCCGTGCATGCAAGGCTCGCTAG...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CTGGATGGGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGAGCCTAGCGAGCCTTaGATGCACGGGGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: LDGEPAKAVLEVQRSLVSEPSEP*MHGDCE
Trigger: CTCGCAGTCCCCGTGCATGCAAGGCTCGCTAGGCTC...AGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCGTGAGTGAGAATGCCTaGACGTTTCGGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VSENACTFRWSGAERPVLVSENA*TFRWSG
Trigger: CCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC...GAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCTCTTCTCTAGCCTCTaGTTGGGGCAAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ENACTFRWSGAERPVLQILFSSL*LGQAWV
Trigger: GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAG...AATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TGTCACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGCCAGGTGTGGGCTTGTaGAGGTCACACAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: CHLWETGSTYRHQVMVHQPGVGL*RSHSPH
Trigger: ATGAGGACTGTGTGACCTGCACAAGCCCACACCTGG...CTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTTGGTGGGAACAGTGGTaGTGGAGGAGGCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLWWEQW*WRRRQQ
Trigger: CTGCTGACGCCTCCTCCACCACCACTGTTCCCACCA...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCAGCCACCTCTGAAGAATaGTGGTGGGAACAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPATSEE*WWEQWW
Trigger: CCACCACTGTTCCCACCACCATTCTTCAGAGGTGGC...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAACCCCTTTTCTCCCTTTaGTCCTGTCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ACTFRWSGAERPVLQIPQPLFSL*SCLARK
Trigger: CTTCCTGGCAAGACAGGACCAAAGGGAGAAAAGGGG...TTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACCCCCTTTTCTCCCTTTaGTCCTGTCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHPLFSL*SCLARK
Trigger: CTTCCTGGCAAGACAGGACCAAAGGGAGAAAAGGGG...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCATGCCAGGAACACCTaGGGGGCCAGGTCTACCCTT +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLHARNT*GARSTL
Trigger: AAGGGTAGACCTGGCCCCCCAGGTGTTCCTGGCATG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGCACCTTTTTCACCCCTaGGTCCTTCAGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HENNISPGLAVEAKGTGLHLFHP*VLQGLA
Trigger: GGCCAGGCCCTGAAGGACCCAGGGGTGAAAAAGGTG...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTATCCAGGGTAGCCCTTaGAGCCCATTGGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: DDSGEAAASSVGRSPPSPIQGSP*SPLVLL
Trigger: CAAGAGGACCAATGGGCTCCAAGGGCTACCCTGGAT...AGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCATCCCTTTTCCCCTCTaGATCCAGGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLIPFPL*IQGSPW
Trigger: CCAAGGGCTACCCTGGATCCAGAGGGGAAAAGGGAT...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TGTCACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGTTCCTGGTCTTCCTGTaGGTCCTCGGTGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: CHLWETGSTYRHQVMVHQFLVFL*VLGVLL
Trigger: TAGCAGGACACCGAGGACCCACAGGAAGACCAGGAA...CTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTAKYRDL*SLRKAM
Trigger: CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTT...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: GEAAASSVGRSPPSPHGPKYRDL*SLRKAM
Trigger: CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTT...AGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGAAAGGGGTCAGCTGGATaGGGAGCCAGCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AHVPVSKDATLRLMSPVGKGSAG*GASQGC
Trigger: ACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTT...TCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGGGGTCAGCTGGATGGGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTAAGGGGTCAGCTGGATaGGGAGCCAGCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGQLDGEPAKAVLEVQRSKGSAG*GASQGC
Trigger: ACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTT...AGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GAGAGACCCGACAGCGGGCTGCCCAGTGTGAGTGAGAATGCCTGCACGTTTCGGAGTCGAGGGGTCCTTTaGCAGGTTCAAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ERPDSGLPSVSENACTFRSRGVL*QVQSCE
Trigger: CTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACT...CCGAAACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTCAAGCCTGGGTCAGGTaGGTTCTCAGTACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: GEAAASSVGRSPPSPHGPQAWVR*VLSTFS
Trigger: TGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTG...AGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGAGACCGGGTCCACCTACAGTCTCTAGCCTCTGCTTaGGGCAAGCCTGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KDATLRLMSPVGDRVHLQSLASA*GKPGSG
Trigger: ACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGA...CTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTGCTGGGAAGGGCTGCTaGGATTGGAAGAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPAGKGC*DWKNAV
Trigger: AACAGCGTTCTTCCAATCTCAGCAGCCCTTCCCAGC...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTGACTTCGGCCACCTCTaGAGAATGGTGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPDFGHL*RMVVGT
Trigger: TGTTCCCACCACCATTCTTCAGAGGTGGCCGAAGTC...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GGGAGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGCAGGTCTCCATATaGCCCAGGGAGATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GSICLRTKETPTACPGVGLQVSI*PREIGL
Trigger: GAGACCTATCTCCCTGGGTCATATGGAGACCTGCAA...GCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCTTGCAGGTCTCCATATaGCCCAGGGAGATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLPCFVVHRPRETRQRAALQVSI*PREIGL
Trigger: GAGACCTATCTCCCTGGGTCATATGGAGACCTGCAA...GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAAGGCCAATCCCTGCTTTaGTGTTGCTTCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PARFGGQGRRGLYSRFPKGQSLL*CCFCSR
Trigger: TCTGGAGCAGAAGCAACATCAAAGCAGGGATTGGCC...TTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR TCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCTGGTGCCAGAGATTTTaGAACCACAAGAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSWCQRF*NHKSRP
Trigger: GGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCA...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CTGGATGGGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTACGCCACCCTCAGGTTaGTGTCACCTGTGGGAGACC +
Preference number: 4 (lower is better)
Translates to: LDGEPAKAVLEVQRSLVSTPPSG*CHLWET
Trigger: GGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGT...AGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCGTCAGCAGGCAGCATaGTTTGTGGCCACCACGCTT +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLRQQAA*FVATTL
Trigger: AAGCGTGGTGGCCACAAAGCATGCTGCCTGCTGACG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACCTTTCTGTCCCTGCTTaGCTCGTTTTCCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHLSVPA*LVFLVF
Trigger: GAAGACCAGGAAAACGAGGCAAGCAGGGACAGAAAG...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCATCCCCTTTCTGTCCCTaGTTGCCTCGTTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPSPFCP*LPRFPG
Trigger: ACCAGGAAAACGAGGCAAGCAGGGACAGAAAGGGGA...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCCCATCCCCACAGGTaGCGTGCTGGTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QPRLSLKYRDLWSLRKAMAHPHR*RAGLQC
Trigger: ACACTGCAGACCAGCACGGCACCTGTGGGGATGGGC...CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCTGTAGCAGTACTGGGTaGATTGCAGGTCTCCATATG +
Preference number: 4 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGCSSTG*IAGLHM
Trigger: CATATGGAGACCTGCAATGCACCCAGTACTGCTACA...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAAGAGATCAACTAGCGAGCCTTGCATaGACGGGGACTGCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FRWSGAERPVLQIPQRDQLASLA*TGTARS
Trigger: AGACCTCGCAGTCCCCGTGCATGCAAGGCTCGCTAG...TTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCCAGGTGTGGGCTTGTaGAGGTCACACAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: MASLMTVEKLLPVLWGAAPGVGL*RSHSPH
Trigger: ATGAGGACTGTGTGACCTGCACAAGCCCACACCTGG...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGCCAGGTGTGGGCTTGTaGAGGTCACACAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TCPLPCFVVHRPRETRQRPGVGL*RSHSPH
Trigger: ATGAGGACTGTGTGACCTGCACAAGCCCACACCTGG...CCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACGGTGACAGCGGATGCAGTCGTCACCCACATCGCTGTTACCGTCGTCACACTCACAGGGCTGCCCATGTaGCTGTCTCTAAAGACGCCA +
Preference number: 4 (lower is better)
Translates to: TVTADAVVTHIAVTVVTLTGLPM*LSLKTP
Trigger: TGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGT...GAGTGTGACGACGGTAACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTCTCCTCACGGCCCTCAGGTGAAGTAGCGGCAGGGCGTGGAGTCGATGTAGCATCTTCTGATCCAGGCTaGGAAGGGCTGCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: FSSRPSGEVAAGRGVDVASSDPG*EGLLRL
Trigger: CAATCTCAGCAGCCCTTCCCAGCCTGGATCAGAAGA...TGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGAGGGCCGTGAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGATCCAGGGTAGCCCTTaGAGCCCATTGGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TCPLPCFVVHRPRETRQRIQGSP*SPLVLL
Trigger: CAAGAGGACCAATGGGCTCCAAGGGCTACCCTGGAT...CCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCATCCCTTTTCCCCTCTaGATCCAGGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSIPFPL*IQGSPW
Trigger: CCAAGGGCTACCCTGGATCCAGAGGGGAAAAGGGAT...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCTTCCTGGTCTTCCTGTaGGTCCTCGGTGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSFLVFL*VLGVLL
Trigger: TAGCAGGACACCGAGGACCCACAGGAAGACCAGGAA...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCCCAGGCTTGCCTGGTaGGCCCATAACTCCACTATC +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLPRLAW*AHNSTI
Trigger: GATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CCACAAGAGCCGCCCCTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCCCCAGGCTTGCCTGGTaGGCCCATAACTCCACTATC +
Preference number: 4 (lower is better)
Translates to: PQEPPLWETLRRGASSLAPRLAW*AHNSTI
Trigger: GATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGG...GGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACAAGGCAATGGCGTTTTaGGTGTTCAGCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHKAMAF*VFSLSS
Trigger: GCTTGAGAGGCTGAACACCCAAAACGCCATTGCCTT...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCTCTGCGGAAGGCAATaGCGTTTTGGGTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ENACTFRWSGAERPVLQILCGRQ*RFGCSA
Trigger: GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAG...AATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCTCTGCGGAAGGCAATaGCGTTTTGGGTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: MASLMTVEKLLPVLWGAALCGRQ*RFGCSA
Trigger: GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAG...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGAGTAGCGGCAGGGCGTaGAGTCGATGTAGCAGTACT +
Preference number: 4 (lower is better)
Translates to: TCPLPCFVVHRPRETRQRSSGRA*SRCSST
Trigger: AGTACTGCTACATCGACTCCACGCCCTGCCGCTACT...CCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGAGTAGCGGCAGGGCGTaGAGTCGATGTAGCAGTACT +
Preference number: 4 (lower is better)
Translates to: QRGRALARNALPRESPLQSSGRA*SRCSST
Trigger: AGTACTGCTACATCGACTCCACGCCCTGCCGCTACT...CTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACGGTGACAGCGGATGCAGTCGTCACCCACATCGCTGTTACCGTCGTCACACTCTTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TVTADAVVTHIAVTVVTLLSHKG*WRRGQD
Trigger: GTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAA...GAGTGTGACGACGGTAACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCCACTTCCCTGCTTTGTaGTTCATAGGCCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GRALARNALPRESPLQLAHFPAL*FIGLER
Trigger: TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTG...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTTCTCTAGCCTCTGCTTaGGGCAAGCCTGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLSLASA*GKPGSG
Trigger: ACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGA...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACAGCCTGCCCAGGTGTaGGCTTGTGCAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: TPRERAHFPALWFIGLERQPAQV*ACAGHT
Trigger: TGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTG...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CTGGATGGGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTCAGCCTGCCCAGGTGTaGGCTTGTGCAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: LDGEPAKAVLEVQRSLVSQPAQV*ACAGHT
Trigger: TGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTG...AGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCGGGTGGACCTCACCTTaGAGATGTCTTTCCAGAATA +
Preference number: 4 (lower is better)
Translates to: GRALARNALPRESPLQLAGWTSP*RCLSRI
Trigger: TATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCC...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGGGTCTGCTGTGGGGGTaGACCTCACCTTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: HENNISPGLAVEAKGTGLGLLWG*TSPWRC
Trigger: ACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACC...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CAA 72 bp TGGATCCAGGGTAGCCCTTGGAGCCCATTGGTCCTCTaGACCCTGGCAAGCCCATCATACCCAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: WIQGSPWSPLVL*TLASPSYPGHL
Trigger: AAGGTGACCTGGGTATGATGGGCTTGCCAGGGTCAAGAGGACCAATGGGCTCCAAGGGCTACCCTGGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679838.1
CDS-3UTR TCA 90 bp AGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACAGCCAAGGCTGTCCTTaGAGTACAGAGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RTKETPTACPGVGLCRSHSQGCP*STEISG
Trigger: ACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCT...GTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCAGCCAAGGCTGTCCTTaGAGTACAGAGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLSQGCP*STEISG
Trigger: ACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCT...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GACACAGGCTCATTAAATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTCTCACGGCCCTCAGGTaGAGTAGCGGCAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: DTGSLNSFVQKPKGVPPALTALR*SSGRAW
Trigger: CCACGCCCTGCCGCTACTTCACCTGAGGGCCGTGAG...AGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTATTTAATGAGCCTGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACAGTCCTCATGCCCTTTGGGAAACACTaGGAAGAGGAGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RHQQPAQVWACAGHTVLMPFGKH*EEEPLL
Trigger: GAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGG...CATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCATGAGGGACATTTTTaGGACAGGGGGCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: VSENACTFRWSGAERPVLHEGHF*DRGQSA
Trigger: TGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATG...GAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCTTTTCTCTTCCTCACTaGTGTTTGCGTGCGCGTGTG +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLFSLPH*CLRARV
Trigger: CACACGCGCACGCAAACAGCAGTGAGGAAGAGAAAA...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383786.9
ENST00000603808.5
CDS-3UTR GCA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCCATTTCACCTTTCTaGCCCAACATTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGPISPF*PNIPGN
Trigger: ATTTCCTGGAATGTTGGGGCAGAAAGGTGAAATGGG...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGTCCCCTTTCTGTCCCTaGTTGCCTCGTTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QRGRALARNALPRESPLQSPFCP*LPRFPG
Trigger: ACCAGGAAAACGAGGCAAGCAGGGACAGAAAGGGGA...CTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCCCCTTTCTGTCCCTaGTTGCCTCGTTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPSPFCP*LPRFPG
Trigger: ACCAGGAAAACGAGGCAAGCAGGGACAGAAAGGGGA...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CTTGTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGCCCATCCCCACAGGTaGCGTGCTGGTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LVFVTQRLVETGPGHGQFAHPHR*RAGLQC
Trigger: ACACTGCAGACCAGCACGGCACCTGTGGGGATGGGC...AAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CCTCGGTGTCCTGCTATCCCAGGTTCACCTTTTGGACCCATTTCACCTTTCTGCCACGGTGACAGCGGATaGAGTCGTCACCCACATCGC +
Preference number: 4 (lower is better)
Translates to: PRCPAIPGSPFGPISPFCHGDSG*SRHPHR
Trigger: GCGATGTGGGTGACGACTGCATCCGCTGTCACCGTG...GCAGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGATAGCAGGACACCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679838.1
CDS-3UTR GCA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACAGTACTGGGTGCATTaGAGGTCTCCATATGACCCA +
Preference number: 4 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPQYWVH*RSPYDP
Trigger: TGGGTCATATGGAGACCTGCAATGCACCCAGTACTG...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGTACTGGGTGCATTaGAGGTCTCCATATGACCCA +
Preference number: 4 (lower is better)
Translates to: VSENACTFRWSGAERPVLQYWVH*RSPYDP
Trigger: TGGGTCATATGGAGACCTGCAATGCACCCAGTACTG...GAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGAGCTGCCCATGAACACTaGTGTAGGGGAGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TPRERAHFPALWFIGLERAAHEH*CRGGLE
Trigger: CTCCAAGCCTCCCCTACAGCAGTGTTCATGGGCAGC...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTGCCACCTCTGAAGAATaGTGGTGGGAACAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLATSEE*WWEQWW
Trigger: CCACCACTGTTCCCACCACCATTCTTCAGAGGTGGC...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGCCCCTTTTCTCCCTTTaGTCCTGTCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSRRQRGRALARNALPREPLFSL*SCLARK
Trigger: CTTCCTGGCAAGACAGGACCAAAGGGAGAAAAGGGG...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCATTCCTGGTCTTCCTGTaGGTCCTCGGTGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGAFLVFL*VLGVLL
Trigger: TAGCAGGACACCGAGGACCCACAGGAAGACCAGGAA...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGGCCAGGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGCTTGCCTCGTTTTCCTaGTCTTCCTGTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GPGHGQFDDSGEAAASSVLASFS*SSCGSS
Trigger: CGAGGACCCACAGGAAGACCAGGAAAACGAGGCAAG...CACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTTGCCTCGTTTTCCTaGTCTTCCTGTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLLASFS*SSCGSS
Trigger: CGAGGACCCACAGGAAGACCAGGAAAACGAGGCAAG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCCCAGGCTTGCCTGGTaGGCCCATAACTCCACTATC +
Preference number: 4 (lower is better)
Translates to: RTCPLPCFVVHRPRETRQPRLAW*AHNSTI
Trigger: GATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGG...CTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCTCTCAAGCTCCTCCTaGTTGTTGACCACAAAAATC +
Preference number: 4 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRLSSSS*LLTTKI
Trigger: GATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAG...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CCTCGGTGTCCTGCTATCCCAGGTTCACCTTTTGGACCCATTTCACCTTTCTGCAAGGGGTCAGCTGGATaGGGAGCCAGCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PRCPAIPGSPFGPISPFCKGSAG*GASQGC
Trigger: ACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTT...GCAGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGATAGCAGGACACCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
CDS-3UTR CCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAAGTAGCGGCAGGGCGTaGAGTCGATGTAGCAGTACT +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGASSGRA*SRCSST
Trigger: AGTACTGCTACATCGACTCCACGCCCTGCCGCTACT...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGGCCAGGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGAGTAGCGGCAGGGCGTaGAGTCGATGTAGCAGTACT +
Preference number: 4 (lower is better)
Translates to: GPGHGQFDDSGEAAASSVSSGRA*SRCSST
Trigger: AGTACTGCTACATCGACTCCACGCCCTGCCGCTACT...CACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CTTGTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTCTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: LVFVTQRLVETGPGHGQFLLPVL*GAAHLL
Trigger: GAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAG...AAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTTGCTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: AVLEVQRSLVSAEGNGVLLLPVL*GAAHLL
Trigger: GAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAG...CAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCGAGATTCTTCATGTCTaGGGAGAGAAGCGGACTTCG +
Preference number: 4 (lower is better)
Translates to: PLPCFVVHRPRETRQRAAEILHV*GEKRTS
Trigger: CGAAGTCCGCTTCTCTCCCCAGACATGAAGAATCTC...GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000681097.1
CDS-3UTR CCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCATCACACAAAGGTTGGTaGAGACGGGGCCAGGACATG +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGASHKGW*RRGQDM
Trigger: CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGA...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCATTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGALSHKG*WRRGQD
Trigger: GTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAA...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAAAGTCAGAGCCGTCACAGTCCTCCACACCCTCATGCCGGTGACCATCTCCACCAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QSQSRHSPPHPHAGDHLHQEPPL*ETLRRG
Trigger: TCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTG...GTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAAAGAGGTAGAGCTCTaGCCAGGAACGCTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: VSRRQRGRALARNALPREKEVEL*PGTLCL
Trigger: TAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTT...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATCCCGGACGGCCAGGTTaGCCAGAAGGCCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNPGRPG*PEGPGL
Trigger: CAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGG...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCAGCCAAGGCTGTCCTTaGAGTACAGAGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSSQGCP*STEISG
Trigger: ACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCT...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAGCGGGCTGCCCAGTGTaGGTGAGAATGCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: EMDMRDIFETGGKVQREPAGCPV*VRMPAR
Trigger: ACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGC...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAAAGTCAGAGCCGTCACAGTCCTCCACACCCTCATGCCGGTGACCATCTCCACGTCACACAGTCCTCATaGGTCTCCTGGACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: QSQSRHSPPHPHAGDHLHVTQSS*VSWTGN
Trigger: ATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGAC...GTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GAGAGACCCGACAGCGGGCTGCCCAGTGTGAGTGAGAATGCCTGCACGTTTCGGCCCATTTCACCTTTCTaGCCCAACATTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ERPDSGLPSVSENACTFRPISPF*PNIPGN
Trigger: ATTTCCTGGAATGTTGGGGCAGAAAGGTGAAATGGG...CCGAAACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGAGGGTCCTCGGTGTCCTaGTATCCCAGGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: TPRERAHFPALWFIGLERGSSVS*YPRFTF
Trigger: AAAGGTGAACCTGGGATAGCAGGACACCGAGGACCC...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGAGACCGGGTCCACCTACAGCTTTCTGTCCCTGCTTaGCTCGTTTTCCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KDATLRLMSPVGDRVHLQLSVPA*LVFLVF
Trigger: GAAGACCAGGAAAACGAGGCAAGCAGGGACAGAAAG...CTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGTCCCCTTTCTGTCCCTaGTTGCCTCGTTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HENNISPGLAVEAKGTGLSPFCP*LPRFPG
Trigger: ACCAGGAAAACGAGGCAAGCAGGGACAGAAAGGGGA...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGGGGTCAGCTGGATGGGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTTCCCCTTTCTGTCCCTaGTTGCCTCGTTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RGQLDGEPAKAVLEVQRSSPFCP*LPRFPG
Trigger: ACCAGGAAAACGAGGCAAGCAGGGACAGAAAGGGGA...AGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCACTCCTCCCCAGGCTaGAGGAGCCCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: WGWTSPWRCLSRIKLSPTHSSPG*RSPSPQ
Trigger: CTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTG...AGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTGTAGCAGTACTGGGTaGATTGCAGGTCTCCATATG +
Preference number: 4 (lower is better)
Translates to: CLRTKETPTACPGVGLCRCSSTG*IAGLHM
Trigger: CATATGGAGACCTGCAATGCACCCAGTACTGCTACA...CCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACTGTAGCAGTACTGGGTaGATTGCAGGTCTCCATATG +
Preference number: 4 (lower is better)
Translates to: RTKETPTACPGVGLCRSHCSSTG*IAGLHM
Trigger: CATATGGAGACCTGCAATGCACCCAGTACTGCTACA...GTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGAGAGTTGGCCAATCCCTaGTTTGATGTTGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VRMPARFGGQGRRGLYSRELANP*FDVASA
Trigger: AGCAGAAGCAACATCAAAGCAGGGATTGGCCAACTC...TCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR GCA 90 bp ATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGACGTCACGCCTCTGAGTaGTCCCAGTGCCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: MDMRDIFETGGKVQREPRRHASE*SQCLAC
Trigger: ACAGGCCAGGCACTGGGAGCACTCAGAGGCGTGACG...TCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGTCAGGACAACCATGCTaGCCAGGGTCTGGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMSGQPC*PGSGEG
Trigger: ACCCTCGCCAGACCCTGGCCAGCATGGTTGTCCTGA...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGGGGTCAGCTGGATGGGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTTCTTCTGATCCAGGCTaGGAAGGGCTGCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: RGQLDGEPAKAVLEVQRSSSDPG*EGLLRL
Trigger: CAATCTCAGCAGCCCTTCCCAGCCTGGATCAGAAGA...AGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGAATCCAGGGTAGCCCTTaGAGCCCATTGGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TPRERAHFPALWFIGLERIQGSP*SPLVLL
Trigger: CAAGAGGACCAATGGGCTCCAAGGGCTACCCTGGAT...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACTTGCCTCGTTTTCCTaGTCTTCCTGTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TPRERAHFPALWFIGLERLASFS*SSCGSS
Trigger: CGAGGACCCACAGGAAGACCAGGAAAACGAGGCAAG...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCAAGGCAATGGCGTTTTaGGTGTTCAGCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSKAMAF*VFSLSS
Trigger: GCTTGAGAGGCTGAACACCCAAAACGCCATTGCCTT...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLKYRDL*SLRKAM
Trigger: CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTT...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGAGTCGAGGGGTCCTTTaGCAGGTTCAAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HENNISPGLAVEAKGTGLSRGVL*QVQSCE
Trigger: CTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACT...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GGGAGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCCAAGCCTGGGTCAGGTaGGTTCTCAGTACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: GSICLRTKETPTACPGVGQAWVR*VLSTFS
Trigger: TGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTG...GCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGCAAGCCTGGGTCAGGTaGGTTCTCAGTACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: CLRTKETPTACPGVGLCRQAWVR*VLSTFS
Trigger: TGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTG...CCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CAA 72 bp AACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTaGGGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: NTEKRSLFSSLC*GQAWVRWVLST
Trigger: AGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCTTGATGAAAGTCGGCTaGGACACGATAGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GHGQFDDSGEAAASSVGRLMKVG*DTIERK
Trigger: CTTCCTCTCTATCGTGTCTCAGCCGACTTTCATCAA...GCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp TCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTCCACCACGCTTCTTCTaGTCCAGGCTGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLQLVKIGQFLLEVCCGGPPRFF*SRLGRA
Trigger: AGCCCTTCCCAGCCTGGATCAGAAGAAGCGTGGTGG...ACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTAGCCAAGGCTGTCCTTaGAGTACAGAGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLSQGCP*STEISG
Trigger: ACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCT...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGGATTCGTCACGCCTCTaGGTGCTCCCAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TKPYSGKMVMKGSSQTCTDSSRL*VLPVPG
Trigger: GCCAGGCACTGGGAGCACTCAGAGGCGTGACGAATC...CGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR TCA 90 bp CAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGGAAATGATGAGCAGATaGGCGAGGCTGAATGATGAG +
Preference number: 4 (lower is better)
Translates to: QRGRALARNALPRESPLQEMMSR*ARLNDE
Trigger: CTCATCATTCAGCCTCGCTCATCTGCTCATCATTTC...CTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR TCA 90 bp GACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGTGCTGCCCAGTGTGAGTaGGAATGCCTGCACGTTTCG +
Preference number: 4 (lower is better)
Translates to: DMRDIFETGGKVQREPRGAAQCE*ECLHVS
Trigger: CGAAACGTGCAGGCATTCTCACTCACACTGGGCAGC...ACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGACATGAGGGACATTTTTaGGACAGGGGGCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: AHVPVSKDATLRLMSPVGHEGHF*DRGQSA
Trigger: TGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATG...TCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGGATTCAGGACAACCATaGTGGCCAGGGTCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMDSGQP*WPGSGE
Trigger: CTCGCCAGACCCTGGCCAGCATGGTTGTCCTGAATC...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTTGCGTCAGCAGGCAGCATaGTTTGTGGCCACCACGCTT +
Preference number: 4 (lower is better)
Translates to: AVLEVQRSLVSAEGNGVLRQQAA*FVATTL
Trigger: AAGCGTGGTGGCCACAAAGCATGCTGCCTGCTGACG...CAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCCCATTTCACCTTTCTaGCCCAACATTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: DDSGEAAASSVGRSPPSPPISPF*PNIPGN
Trigger: ATTTCCTGGAATGTTGGGGCAGAAAGGTGAAATGGG...AGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTGGGGCAAGCCTGGGTCCTTTCTGTCCCTGCTTaGCTCGTTTTCCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: NTEKRSLFSSLCLGQAWVLSVPA*LVFLVF
Trigger: GAAGACCAGGAAAACGAGGCAAGCAGGGACAGAAAG...GACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTTTCTGTCCCTGCTTaGCTCGTTTTCCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLLSVPA*LVFLVF
Trigger: GAAGACCAGGAAAACGAGGCAAGCAGGGACAGAAAG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGATGCATGCACGGGGACTaGGAGGTCTCCAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: MDMRDIFETGGKVQREPRCMHGD*EVSSSS
Trigger: GCTGGAACTGGAGACCTCGCAGTCCCCGTGCATGCA...TCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCTGCATGCACGGGGACTaGGAGGTCTCCAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLWGWTSPWRCLSRIKLSCMHGD*EVSSSS
Trigger: GCTGGAACTGGAGACCTCGCAGTCCCCGTGCATGCA...GCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CTGGATGGGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTTTTCTACTTGAGGTCTaGTGTGGGGGTGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: LDGEPAKAVLEVQRSLVSFLLEV*CGGGPH
Trigger: GTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAA...AGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGATCAGGACAACCATGCTaGCCAGGGTCTGGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: MDMRDIFETGGKVQREPRSGQPC*PGSGEG
Trigger: ACCCTCGCCAGACCCTGGCCAGCATGGTTGTCCTGA...TCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTTGTCTACCCTTCCTTCCTaGTCGGCCAAGCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: AVLEVQRSLVSAEGNGVLSTLPS*SAKLPL
Trigger: AAGGGGGAGCTTGGCCGACCAGGAAGGAAGGGTAGA...CAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTGGGGCAAGATCCCTTTTCCCCTCTaGATCCAGGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LWETLRRGASSLASAWGKIPFPL*IQGSPW
Trigger: CCAAGGGCTACCCTGGATCCAGAGGGGAAAAGGGAT...CTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATCCCAGGCTTGCCTGGTaGGCCCATAACTCCACTATC +
Preference number: 4 (lower is better)
Translates to: VFVTQRLVETGPGHGQFDPRLAW*AHNSTI
Trigger: GATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGG...ATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTACAAAGACATCTTCCTaGAGGCCCGGGAAATCCTCT +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLTKTSS*RPGKSS
Trigger: AGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGT...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CCA 90 bp GGGCCAGGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGAAGGCAATGGCGTTTTaGGTGTTCAGCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GPGHGQFDDSGEAAASSVKAMAF*VFSLSS
Trigger: GCTTGAGAGGCTGAACACCCAAAACGCCATTGCCTT...CACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGAAGGCAATGGCGTTTTaGGTGTTCAGCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: HENNISPGLAVEAKGTGLKAMAF*VFSLSS
Trigger: GCTTGAGAGGCTGAACACCCAAAACGCCATTGCCTT...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACAGTCCTCATGAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: RHQQPAQVWACAGHTVLMKYRDL*SLRKAM
Trigger: CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTT...CATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: MASLMTVEKLLPVLWGAAKYRDL*SLRKAM
Trigger: CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTT...GGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGTCACACAAAGGTTGGTaGAGACGGGGCCAGGACATG +
Preference number: 4 (lower is better)
Translates to: QPRLSLKYRDLWSLRKAMSHKGW*RRGQDM
Trigger: CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGA...CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: TPRERAHFPALWFIGLERQEPPL*ETLRRG
Trigger: TCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTG...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGGGTCTGCTGTGGGGGTaGACCTCACCTTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMGLLWG*TSPWRC
Trigger: ACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACC...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CAA 72 bp TGGGTCCTCGGTGTCCTGCTATCCCAGGTTCACCTTTaGGACCCATTTCACCTTTCTGCCCCAACATTCCAG +
Preference number: 4 (lower is better)
Translates to: WVLGVLLSQVHL*DPFHLSAPTFQ
Trigger: CTGGAATGTTGGGGCAGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGATAGCAGGACACCGAGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679838.1
3UTR CAA 72 bp CAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTaGGGTGTTCAGCCTCTCAAGCTCCTCCTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: QRSLVSAEGNGV*GVQPLKLLLVV
Trigger: AACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679838.1
CDS-3UTR TCA 90 bp AAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGGCTGGGAAGGGCTGCTaGGATTGGAAGAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: KLGNFYLRSAVGVDLTLEAGKGC*DWKNAV
Trigger: AACAGCGTTCTTCCAATCTCAGCAGCCCTTCCCAGC...CTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCATGAGCCCGTCATTGTaGGGCAGGGCCCAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: GQAWVRWVLSTFSQLSLFMSPSL*GRAQSG
Trigger: TCCGCTTTGGGCCCTGCCTCACAATGACGGGCTCAT...GAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR TCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGATCTCCAGTTCCAGCATaGGATTCTTCATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TPRERAHFPALWFIGLERSPVPA*DSSCLG
Trigger: CCCCAGACATGAAGAATCTCATGCTGGAACTGGAGA...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000681097.1
CDS-3UTR TCA 90 bp AGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTGCTGCCCAGTGTGAGTaGGAATGCCTGCACGTTTCG +
Preference number: 4 (lower is better)
Translates to: RSAVGVDLTLEMSFQNKTAAQCE*ECLHVS
Trigger: CGAAACGTGCAGGCATTCTCACTCACACTGGGCAGC...AGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTGCAGGTTCAAAGCTGTaGGCCACCCCGAGAGAACGT +
Preference number: 4 (lower is better)
Translates to: QFLLEVCCGGGPHLGDVFAGSKL*ATPRER
Trigger: ACGTTCTCTCGGGGTGGCTCACAGCTTTGAACCTGC...AAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CTTGTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTTGGTGCCAGAGATTTTaGAACCACAAGAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LVFVTQRLVETGPGHGQFWCQRF*NHKSRP
Trigger: GGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCA...AAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCCTGGGCAGACGCCACCCTCAGGTTaGTGTCACCTGTGGGAGACC +
Preference number: 4 (lower is better)
Translates to: LGQVGSQYFFTVKSFPGQTPPSG*CHLWET
Trigger: GGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGT...CTGCCCAGGAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCGTCAGCAGGCAGCATaGTTTGTGGCCACCACGCTT +
Preference number: 4 (lower is better)
Translates to: QFLLEVCCGGGPHLGDVFRQQAA*FVATTL
Trigger: AAGCGTGGTGGCCACAAAGCATGCTGCCTGCTGACG...AAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGTGGGTCCTCGGTGTCCTaGTATCCCAGGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: DMRDIFETGGKVQREPRGGSSVS*YPRFTF
Trigger: AAAGGTGAACCTGGGATAGCAGGACACCGAGGACCC...ACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGGGGTCCTCGGTGTCCTaGTATCCCAGGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMGSSVS*YPRFTF
Trigger: AAAGGTGAACCTGGGATAGCAGGACACCGAGGACCC...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGGGTGCCGTGCTGGTCTaGAGTGTAATCCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMGAVLV*SVIHRV
Trigger: TACCCTGTGGATTACACTGCAGACCAGCACGGCACC...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGGTGCCGTGCTGGTCTaGAGTGTAATCCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: VFVTQRLVETGPGHGQFDGAVLV*SVIHRV
Trigger: TACCCTGTGGATTACACTGCAGACCAGCACGGCACC...ATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCTGCATGCACGGGGACTaGGAGGTCTCCAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GQAWVRWVLSTFSQLSLFCMHGD*EVSSSS
Trigger: GCTGGAACTGGAGACCTCGCAGTCCCCGTGCATGCA...GAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGTGTGAGTGAGAATGCCTaGACGTTTCGGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: DMRDIFETGGKVQREPRGVSENA*TFRWSG
Trigger: CCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC...ACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCACACCCCGAGAGAACGTaGCCACTTCCCTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: EMDMRDIFETGGKVQREPHPERT*PLPCFV
Trigger: CACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTG...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGACAGGGCTGCCCATGTaGCTGTCTCTAAAGACGCCA +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMTGLPM*LSLKTP
Trigger: TGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGT...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCGGCCTGGCCAACCGATaGGCCCAGGCATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KAAHRHARLIILLKREELGLANR*AQACQE
Trigger: TTCCTGGCATGCCTGGGCCCATCGGTTGGCCAGGCC...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTTGTTCCTGGTCTTCCTGTaGGTCCTCGGTGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: AVLEVQRSLVSAEGNGVLFLVFL*VLGVLL
Trigger: TAGCAGGACACCGAGGACCCACAGGAAGACCAGGAA...CAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGCTCTCAAGCTCCTCCTaGTTGTTGACCACAAAAATC +
Preference number: 4 (lower is better)
Translates to: VSRRQRGRALARNALPRELSSSS*LLTTKI
Trigger: GATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAG...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACAGTCCTCATGCTCTCAAGCTCCTCCTaGTTGTTGACCACAAAAATC +
Preference number: 4 (lower is better)
Translates to: RHQQPAQVWACAGHTVLMLSSSS*LLTTKI
Trigger: GATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAG...CATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGAGTAGCGGCAGGGCGTaGAGTCGATGTAGCAGTACT +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMSSGRA*SRCSST
Trigger: AGTACTGCTACATCGACTCCACGCCCTGCCGCTACT...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CTTGTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTTCACACAAAGGTTGGTaGAGACGGGGCCAGGACATG +
Preference number: 4 (lower is better)
Translates to: LVFVTQRLVETGPGHGQFSHKGW*RRGQDM
Trigger: CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGA...AAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCTCTGCTTGGGGCAAGAGTCGAGGGGTCCTTTaGCAGGTTCAAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LWETLRRGASSLASAWGKSRGVL*QVQSCE
Trigger: CTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACT...CTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCAAGCCTGGGTCAGGTaGGTTCTCAGTACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLQAWVR*VLSTFS
Trigger: TGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CAA 72 bp GGTGCCAGAGATTTTGAAACCACAAGAGCCGCCCCTTaGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GARDFETTRAAP*GNTEKRSLFSS
Trigger: GCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGTTGATGAAAGTCGGCTaGGACACGATAGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RTCPLPCFVVHRPRETRQLMKVG*DTIERK
Trigger: CTTCCTCTCTATCGTGTCTCAGCCGACTTTCATCAA...CTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ACCCCGAGAGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGATTGATGAAAGTCGGCTaGGACACGATAGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TPRERAHFPALWFIGLERLMKVG*DTIERK
Trigger: CTTCCTCTCTATCGTGTCTCAGCCGACTTTCATCAA...TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp TCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGCTGGGAAGGGCTGCTaGGATTGGAAGAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLQLVKIGQFLLEVCCGGAGKGC*DWKNAV
Trigger: AACAGCGTTCTTCCAATCTCAGCAGCCCTTCCCAGC...ACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTGACTTCGGCCACCTCTaGAGAATGGTGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: LWGWTSPWRCLSRIKLSPDFGHL*RMVVGT
Trigger: TGTTCCCACCACCATTCTTCAGAGGTGGCCGAAGTC...AGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTTGGGTGTTCAGCCTCTAGCCAAGGCTGTCCTTaGAGTACAGAGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TEISGLCGRQWRFGCSASSQGCP*STEISG
Trigger: ACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCT...AGAGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679838.1
CDS-3UTR TCA 90 bp GTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATTTGCAGGTCTCCATATaGCCCAGGGAGATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VFVTQRLVETGPGHGQFDLQVSI*PREIGL
Trigger: GAGACCTATCTCCCTGGGTCATATGGAGACCTGCAA...ATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGCCCTTTGGGAAACACTaGGAAGAGGAGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLGNFYLRSAVGVDLTLEPFGKH*EEEPLL
Trigger: GAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGG...CTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp TCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTTGGGCAATTTCTACTTaGGGTCTGCTGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLQLVKIGQFLLEVCCGGWAIST*GLLWGW
Trigger: CCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCA...ACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCCCATTTCACCTTTCTaGCCCAACATTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLPISPF*PNIPGN
Trigger: ATTTCCTGGAATGTTGGGGCAGAAAGGTGAAATGGG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTGGGTCCTCGGTGTCCTaGTATCCCAGGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: QFLLEVCCGGGPHLGDVFGSSVS*YPRFTF
Trigger: AAAGGTGAACCTGGGATAGCAGGACACCGAGGACCC...AAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCGGTGCCGTGCTGGTCTaGAGTGTAATCCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: LLWGWTSPWRCLSRIKLSGAVLV*SVIHRV
Trigger: TACCCTGTGGATTACACTGCAGACCAGCACGGCACC...GCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATACGTGCCCACTTCCCTaGTTTGTGGTTCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: VFVTQRLVETGPGHGQFDTCPLP*FVVHRP
Trigger: AGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGT...ATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCAATTCCCAAAGTCATTaGATTCAGGACAACCATGCT +
Preference number: 4 (lower is better)
Translates to: MTVEKLLPVLWGAAHLLLNSQSH*IQDNHA
Trigger: AGCATGGTTGTCCTGAATCCAATGACTTTGGGAATT...GAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGTCTTCTGATCCAGGCTaGGAAGGGCTGCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMSSDPG*EGLLRL
Trigger: CAATCTCAGCAGCCCTTCCCAGCCTGGATCAGAAGA...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAATGGTGGGAACAGTGGTaGTGGAGGAGGCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: IASYKNPRVSLQLVKIGQWWEQW*WRRRQQ
Trigger: CTGCTGACGCCTCCTCCACCACCACTGTTCCCACCA...TTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATCCCCTTTTCTCCCTTTaGTCCTGTCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VFVTQRLVETGPGHGQFDPLFSL*SCLARK
Trigger: CTTCCTGGCAAGACAGGACCAAAGGGAGAAAAGGGG...ATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGTCTACCCTTCCTTCCTaGTCGGCCAAGCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SAVGVDLTLEMSFQNKTKSTLPS*SAKLPL
Trigger: AAGGGGGAGCTTGGCCGACCAGGAAGGAAGGGTAGA...CTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CCACAAGAGCCGCCCCTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCCTCTCAAGCTCCTCCTaGTTGTTGACCACAAAAATC +
Preference number: 4 (lower is better)
Translates to: PQEPPLWETLRRGASSLALSSSS*LLTTKI
Trigger: GATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAG...GGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTCTCTGCGGAAGGCAATaGCGTTTTGGGTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LWGWTSPWRCLSRIKLSPLCGRQ*RFGCSA
Trigger: GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAG...AGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CTATCCCAGGTTCACCTTTTGGACCCATTTCACCTTTCTGCCCCAACATTCCAGAGTAGCGGCAGGGCGTaGAGTCGATGTAGCAGTACT +
Preference number: 4 (lower is better)
Translates to: LSQVHLLDPFHLSAPTFQSSGRA*SRCSST
Trigger: AGTACTGCTACATCGACTCCACGCCCTGCCGCTACT...CTGGAATGTTGGGGCAGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
CDS-3UTR CCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCCTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: KAAHRHARLIILLKREELLLPVL*GAAHLL
Trigger: GAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAG...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTTCACACAAAGGTTGGTaGAGACGGGGCCAGGACATG +
Preference number: 4 (lower is better)
Translates to: QFLLEVCCGGGPHLGDVFSHKGW*RRGQDM
Trigger: CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGA...AAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCGCAGATGAGCGAGGCTaGATGATGAGCCCGTCATTG +
Preference number: 4 (lower is better)
Translates to: GQAWVRWVLSTFSQLSLFADERG*MMSPSL
Trigger: CAATGACGGGCTCATCATTCAGCCTCGCTCATCTGC...GAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR TCA 90 bp TCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGTGGTGCCAGAGATTTTaGAACCACAAGAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SAVGVDLTLEMSFQNKTKWCQRF*NHKSRP
Trigger: GGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCA...CTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp TGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAACAAGCTCCAGCCTGCTaGGTCCCCAAGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: WTSPWRCLSRIKLSPTQEQAPAC*VPKTQA
Trigger: AGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTG...TTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGTCTCCAGTTCCAGCATaGGATTCTTCATGTCGGACT +
Preference number: 4 (lower is better)
Translates to: QPRLSLKYRDLWSLRKAMSPVPA*DSSCRT
Trigger: AGTCCGACATGAAGAATCTCATGCTGGAACTGGAGA...CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679838.1
CDS-3UTR GCA 90 bp CTTGTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTCTTTCTGTCCCTGCTTaGCTCGTTTTCCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LVFVTQRLVETGPGHGQFLSVPA*LVFLVF
Trigger: GAAGACCAGGAAAACGAGGCAAGCAGGGACAGAAAG...AAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGGCAATGGCGTTTTGCTTTCTGTCCCTGCTTaGCTCGTTTTCCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AVLEVQRSLVSAEGNGVLLSVPA*LVFLVF
Trigger: GAAGACCAGGAAAACGAGGCAAGCAGGGACAGAAAG...CAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GATGCAGTGGTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTGCCCATCCCCACAGGTaGCGTGCTGGTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DAVVLNSSSQTELTACLSAHPHR*RAGLQC
Trigger: ACACTGCAGACCAGCACGGCACCTGTGGGGATGGGC...ACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGACCACTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGGTGAGTGAGAATGCCTaGACGTTTCGGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SAVGVDLTLEMSFQNKTKVSENA*TFRWSG
Trigger: CCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC...CTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGACACCCCGAGAGAACGTaGCCACTTCCCTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VDLTLEMSFQNKTKPYSGHPERT*PLPCFV
Trigger: CACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTG...TCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCAAGGCTATGCAATATaGAGACATGAAAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSQGYAI*RHERNA
Trigger: GGCATTTCTTTCATGTCTGCATATTGCATAGCCTTG...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGGGCAGCTCACAGACATaGACGACTAATAATCTTATT +
Preference number: 4 (lower is better)
Translates to: VSRRQRGRALARNALPREGSSQT*TTNNLI
Trigger: AATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCC...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTTCTTCTGATCCAGGCTaGGAAGGGCTGCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: SLQLVKIGQFLLEVCCGGSSDPG*EGLLRL
Trigger: CAATCTCAGCAGCCCTTCCCAGCCTGGATCAGAAGA...ACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCCATGCCAGGAACACCTaGGGGGCCAGGTCTACCCTT +
Preference number: 4 (lower is better)
Translates to: KAAHRHARLIILLKREELHARNT*GARSTL
Trigger: AAGGGTAGACCTGGCCCCCCAGGTGTTCCTGGCATG...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTATCCCTTTTCCCCTCTaGATCCAGGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: WGWTSPWRCLSRIKLSPTIPFPL*IQGSPW
Trigger: CCAAGGGCTACCCTGGATCCAGAGGGGAAAAGGGAT...AGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCTTGCCTCGTTTTCCTaGTCTTCCTGTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SAVGVDLTLEMSFQNKTKLASFS*SSCGSS
Trigger: CGAGGACCCACAGGAAGACCAGGAAAACGAGGCAAG...CTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGTACAAAGACATCTTCCTaGAGGCCCGGGAAATCCTCT +
Preference number: 4 (lower is better)
Translates to: DMRDIFETGGKVQREPRGTKTSS*RPGKSS
Trigger: AGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGT...ACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CCA 90 bp CTTGTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTAAGGCAATGGCGTTTTaGGTGTTCAGCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LVFVTQRLVETGPGHGQFKAMAF*VFSLSS
Trigger: GCTTGAGAGGCTGAACACCCAAAACGCCATTGCCTT...AAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGCTCTGCGGAAGGCAATaGCGTTTTGGGTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: TKPYSGKMVMKGSSQTCTLCGRQ*RFGCSA
Trigger: GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAG...CGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGGCTGTAGGGGAGGCTTaGAGGACAAGAGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TKPYSGKMVMKGSSQTCTAVGEA*RTRVPS
Trigger: TGAAGGCACTCTTGTCCTCCAAGCCTCCCCTACAGC...CGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGATTAGGGGTGGGAGTTaGCCAATCCCTGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMIRGGS*PIPALM
Trigger: CATCAAAGCAGGGATTGGCCAACTCCCACCCCTAAT...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CCA 90 bp GTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGAGATTCTTCATGTCTaGGGAGAGAAGCGGACTTCG +
Preference number: 4 (lower is better)
Translates to: VFVTQRLVETGPGHGQFDEILHV*GEKRTS
Trigger: CGAAGTCCGCTTCTCTCCCCAGACATGAAGAATCTC...ATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000681097.1
CDS-3UTR CCA 90 bp ACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGTTGTCACACAAAGGTTaGTGGAGACGGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TKPYSGKMVMKGSSQTCTLSHKG*WRRGQD
Trigger: GTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAA...CGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTCAAGAGCCGCCCCTTTaGGAAACACTGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLQLVKIGQFLLEVCCGGQEPPL*ETLRRG
Trigger: TCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTG...ACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTAAAGAGGTAGAGCTCTaGCCAGGAACGCTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: QFLLEVCCGGGPHLGDVFKEVEL*PGTLCL
Trigger: TAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTT...AAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATTTGATGAAAGTCGGCTaGGACACGATAGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VFVTQRLVETGPGHGQFDLMKVG*DTIERK
Trigger: CTTCCTCTCTATCGTGTCTCAGCCGACTTTCATCAA...ATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp TCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTAGCCAAGGCTGTCCTTaGAGTACAGAGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLQLVKIGQFLLEVCCGGSQGCP*STEISG
Trigger: ACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCT...ACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGTTGCAGGTCTCCATATaGCCCAGGGAGATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: TKPYSGKMVMKGSSQTCTLQVSI*PREIGL
Trigger: GAGACCTATCTCCCTGGGTCATATGGAGACCTGCAA...CGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAACTCACGGCCCTCAGGTaGAGTAGCGGCAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIELTALR*SSGRAW
Trigger: CCACGCCCTGCCGCTACTTCACCTGAGGGCCGTGAG...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCATCTCCAGTTCCAGCATaGGATTCTTCATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EMDMRDIFETGGKVQREPSPVPA*DSSCLG
Trigger: CCCCAGACATGAAGAATCTCATGCTGGAACTGGAGA...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000681097.1
CDS-3UTR TCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCGCAGGTTCAAAGCTGTaGGCCACCCCGAGAGAACGT +
Preference number: 4 (lower is better)
Translates to: KAAHRHARLIILLKREELAGSKL*ATPRER
Trigger: ACGTTCTCTCGGGGTGGCTCACAGCTTTGAACCTGC...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GACACAGGCTCATTAAATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTCCCTTTGGGAAACACTaGGAAGAGGAGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: DTGSLNSFVQKPKGVPPAPFGKH*EEEPLL
Trigger: GAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGG...AGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTATTTAATGAGCCTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GATGCAGTGGTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTCAGTGGAGAAGCTGCTaGCAGTTCTGTGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: DAVVLNSSSQTELTACLSQWRSC*QFCGAQ
Trigger: CTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG...ACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGACCACTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATGAGCCTAGCGAGCCTTaGATGCACGGGGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: VLNSSSQTELTACLSSRNEPSEP*MHGDCE
Trigger: CTCGCAGTCCCCGTGCATGCAAGGCTCGCTAGGCTC...ATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGGAGCCTAGCGAGCCTTaGATGCACGGGGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWEPSEP*MHGDCE
Trigger: CTCGCAGTCCCCGTGCATGCAAGGCTCGCTAGGCTC...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCACAAGGCTATGCAATATaGAGACATGAAAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: DMASLMTVEKLLPVLWGAQGYAI*RHERNA
Trigger: GGCATTTCTTTCATGTCTGCATATTGCATAGCCTTG...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TCAGGTGAAGTAGCGGCAGGGCGTGGAGTCGATGTAGCAGTACTGGGTGCATTGGGCAGCTCACAGACATaGACGACTAATAATCTTATT +
Preference number: 4 (lower is better)
Translates to: SGEVAAGRGVDVAVLGALGSSQT*TTNNLI
Trigger: AATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCC...CAATGCACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCCTTTTCTCCCTTTaGTCCTGTCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SAVGVDLTLEMSFQNKTKPLFSL*SCLARK
Trigger: CTTCCTGGCAAGACAGGACCAAAGGGAGAAAAGGGG...CTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAACTTGCCTCGTTTTCCTaGTCTTCCTGTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: IASYKNPRVSLQLVKIGQLASFS*SSCGSS
Trigger: CGAGGACCCACAGGAAGACCAGGAAAACGAGGCAAG...TTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCGAACTCGCGGGGAACTaGGCCCATACACAGATTCCC +
Preference number: 4 (lower is better)
Translates to: KAAHRHARLIILLKREELELAGN*AHTQIP
Trigger: GGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTC...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CCA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCGCCTGCACGTTTCGGTaGTCAGGGGCGGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGACTFR*SGAERP
Trigger: AGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGC...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGTCACTTCCCTGCTTTGTaGTTCATAGGCCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: DMRDIFETGGKVQREPRGHFPAL*FIGLER
Trigger: TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTG...ACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGACATCCACGTCAGGCTaGGCTGGGCTGTGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWTSTSG*AGLWPV
Trigger: GACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGT...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAGTAACAGAGCAGTCCTaGAATGATGAGCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: EMDMRDIFETGGKVQREPVTEQS*NDEQMS
Trigger: GCTCATCTGCTCATCATTTCAGGACTGCTCTGTTAC...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR TCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCAGCGGGCTGCCCAGTGTaGGTGAGAATGCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSAGCPV*VRMPAR
Trigger: ACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGC...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GATGCAGTGGTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTGCAGGTTCAAAGCTGTaGGCCACCCCGAGAGAACGT +
Preference number: 4 (lower is better)
Translates to: DAVVLNSSSQTELTACLSAGSKL*ATPRER
Trigger: ACGTTCTCTCGGGGTGGCTCACAGCTTTGAACCTGC...ACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGACCACTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp TGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCATGAGGGACATTTTTaGGACAGGGGGCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: WGWTSPWRCLSRIKLSPTHEGHF*DRGQSA
Trigger: TGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATG...AGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGCAAGCTCCAGCCTGCTaGGTCCCCAAGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWQAPAC*VPKTQA
Trigger: AGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTG...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGCCCATTTCACCTTTCTaGCCCAACATTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: KLGNFYLRSAVGVDLTLEPISPF*PNIPGN
Trigger: ATTTCCTGGAATGTTGGGGCAGAAAGGTGAAATGGG...CTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGCCCATTTCACCTTTCTaGCCCAACATTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMPISPF*PNIPGN
Trigger: ATTTCCTGGAATGTTGGGGCAGAAAGGTGAAATGGG...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATTCTGAGTGCTCCCAGTaGCTGGCCTGTTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNSECSQ*LACLAL
Trigger: TAATGCCAAACAGGCCAGGCACTGGGAGCACTCAGA...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR GCA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGTGCATGCACGGGGACTaGGAGGTCTCCAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWCMHGD*EVSSSS
Trigger: GCTGGAACTGGAGACCTCGCAGTCCCCGTGCATGCA...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCAGAGCCTAGCGAGCCTTaGATGCACGGGGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSEPSEP*MHGDCE
Trigger: CTCGCAGTCCCCGTGCATGCAAGGCTCGCTAGGCTC...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGTGGCCAGGAACGCTCTaGCTAGAGAGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWWPGTL*LERALC
Trigger: GCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCA...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTGGCCAGGAACGCTCTaGCTAGAGAGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VLNSSSQTELTACLSSRNWPGTL*LERALC
Trigger: GCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCA...ATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATCCCCTTTTCTCCCTTTaGTCCTGTCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNPLFSL*SCLARK
Trigger: CTTCCTGGCAAGACAGGACCAAAGGGAGAAAAGGGG...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCCTTGCCTCGTTTTCCTaGTCTTCCTGTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KAAHRHARLIILLKREELLASFS*SSCGSS
Trigger: CGAGGACCCACAGGAAGACCAGGAAAACGAGGCAAG...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATAGGCCCAGGCTTGCCTaGTGGGCCCATAACTCCACT +
Preference number: 4 (lower is better)
Translates to: VLNSSSQTELTACLSSRNRPRLA*WAHNST
Trigger: AGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCT...ATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCCTGGGCAGACAAAGACATCTTCCTaGAGGCCCGGGAAATCCTCT +
Preference number: 4 (lower is better)
Translates to: LGQVGSQYFFTVKSFPGQTKTSS*RPGKSS
Trigger: AGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGT...CTGCCCAGGAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CCA 90 bp GGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCACAAAGACATCTTCCTaGAGGCCCGGGAAATCCTCT +
Preference number: 4 (lower is better)
Translates to: GQAWVRWVLSTFSQLSLFTKTSS*RPGKSS
Trigger: AGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGT...GAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACTGCTGCCAGTTCTGTaGGGCGCAGCCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSLLPVL*GAAHLL
Trigger: GAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAG...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAATTTAGTCGAGGGGTCCTTTaGCAGGTTCAAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ASYKNPRVSLQLVKIGQFSRGVL*QVQSCE
Trigger: CTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACT...AAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGACAGCCTGCCCAGGTGTaGGCTTGTGCAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGQPAQV*ACAGHT
Trigger: TGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTG...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAAAAAGAGGTAGAGCTCTaGCCAGGAACGCTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: IASYKNPRVSLQLVKIGQKEVEL*PGTLCL
Trigger: TAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTT...TTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCGGGTGGACCTCACCTTaGAGATGTCTTTCCAGAATA +
Preference number: 4 (lower is better)
Translates to: LLWGWTSPWRCLSRIKLSGWTSP*RCLSRI
Trigger: TATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCC...GCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
3UTR CAA 72 bp TTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTaGGAGATGTCTTTCCAGAATAAAACTAAGCCCTAC +
Preference number: 4 (lower is better)
Translates to: FYLRSAVGVDLT*EMSFQNKTKPY
Trigger: GTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp TGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAATTGCAGGTCTCCATATaGCCCAGGGAGATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: WTSPWRCLSRIKLSPTQELQVSI*PREIGL
Trigger: GAGACCTATCTCCCTGGGTCATATGGAGACCTGCAA...TTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCCCCTTTGGGAAACACTaGGAAGAGGAGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KAAHRHARLIILLKREELPFGKH*EEEPLL
Trigger: GAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGG...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACCTACAGACACCAGGTaGTGGTCCACCAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSPTDTR*WSTRPQ
Trigger: TTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGG...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GATGCAGTGGTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTGGTGCCGTGCTGGTCTaGAGTGTAATCCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: DAVVLNSSSQTELTACLSGAVLV*SVIHRV
Trigger: TACCCTGTGGATTACACTGCAGACCAGCACGGCACC...ACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGACCACTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp GGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCTGTAGCAGTACTGGGTaGATTGCAGGTCTCCATATG +
Preference number: 4 (lower is better)
Translates to: GQAWVRWVLSTFSQLSLFCSSTG*IAGLHM
Trigger: CATATGGAGACCTGCAATGCACCCAGTACTGCTACA...GAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGCAGTGGAGAAGCTGCTaGCAGTTCTGTGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SQTELTACLSSRNLSLFLQWRSC*QFCGAQ
Trigger: CTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG...CAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAAAGGGCCAAGCAGCCTaGCGAGTAACAGAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGKGQAA*RVTEQS
Trigger: GGACTGCTCTGTTACTCGGCAGGCTGCTTGGCCCTT...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR GCA 90 bp ATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAAACTCAGGGGAGTATCTaGCTAAGGACCAAGGAGACA +
Preference number: 4 (lower is better)
Translates to: IASYKNPRVSLQLVKIGQTQGSI*LRTKET
Trigger: TGTCTCCTTGGTCCTTAGGCAGATACTCCCCTGAGT...TTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCATGGTGGGAACAGTGGTaGTGGAGGAGGCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSWWEQW*WRRRQQ
Trigger: CTGCTGACGCCTCCTCCACCACCACTGTTCCCACCA...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGTCTACCCTTCCTTCCTaGTCGGCCAAGCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWSTLPS*SAKLPL
Trigger: AAGGGGGAGCTTGGCCGACCAGGAAGGAAGGGTAGA...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGATCTTCTGATCCAGGCTaGGAAGGGCCAAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGSSDPG*EGPSSL
Trigger: CAGGCTGCTTGGCCCTTCCCAGCCTGGATCAGAAGA...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CCA 90 bp TGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCACTTCCCTGCTTTGTaGTTCATAGGCCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: WGWTSPWRCLSRIKLSPTHFPAL*FIGLER
Trigger: TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTG...AGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTACATCCACGTCAGGCTaGGCTGGGCTGTGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGTSTSG*AGLWPV
Trigger: GACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGT...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp GTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTCTCTAGCCTCTGCTTaGGGCAAGCCTGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VLNSSSQTELTACLSSRNSLASA*GKPGSG
Trigger: ACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGA...ATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTGGGTGGACCTCACCTTaGAGATGTCTTTCCAGAATA +
Preference number: 4 (lower is better)
Translates to: WGWTSPWRCLSRIKLSPTGWTSP*RCLSRI
Trigger: TATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCC...AGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATTTGATGAAAGTCGGCTaGGACACGATAGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNLMKVG*DTIERK
Trigger: CTTCCTCTCTATCGTGTCTCAGCCGACTTTCATCAA...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp GTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATGCTGGGAAGGGCTGCTaGGATTGGAAGAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: VLNSSSQTELTACLSSRNAGKGC*DWKNAV
Trigger: AACAGCGTTCTTCCAATCTCAGCAGCCCTTCCCAGC...ATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCAGTCTGGAGCCAGTCCTaGGCTCCTGGGAGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSVWSQS*APGSSN
Trigger: ATTGCTACTCCCAGGAGCTCAGGACTGGCTCCAGAC...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR GCA 90 bp TGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAACAGTACTGGGTGCATTaGAGGTCTCCATATGACCCA +
Preference number: 4 (lower is better)
Translates to: WTSPWRCLSRIKLSPTQEQYWVH*RSPYDP
Trigger: TGGGTCATATGGAGACCTGCAATGCACCCAGTACTG...TTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGCATGCACGGGGACTaGGAGGTCTCCAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGCMHGD*EVSSSS
Trigger: GCTGGAACTGGAGACCTCGCAGTCCCCGTGCATGCA...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCACTCAGGGGAGTATCTaGCTAAGGACCAAGGAGACA +
Preference number: 4 (lower is better)
Translates to: KAAHRHARLIILLKREELTQGSI*LRTKET
Trigger: TGTCTCCTTGGTCCTTAGGCAGATACTCCCCTGAGT...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGCAAGGCTATGCAATATaGAGACATGAAAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: KLGNFYLRSAVGVDLTLEQGYAI*RHERNA
Trigger: GGCATTTCTTTCATGTCTGCATATTGCATAGCCTTG...CTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGGGCAGCTCACAGACATaGACGACTAATAATCTTATT +
Preference number: 4 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMGSSQT*TTNNLI
Trigger: AATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCC...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCTCTACCCTTCCTTCCTaGTCGGCCAAGCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGSTLPS*SAKLPL
Trigger: AAGGGGGAGCTTGGCCGACCAGGAAGGAAGGGTAGA...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTCATGCCAGGAACACCTaGGGGGCCAGGTCTACCCTT +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGHARNT*GARSTL
Trigger: AAGGGTAGACCTGGCCCCCCAGGTGTTCCTGGCATG...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAATCCCTTTTCCCCTCTaGATCCAGGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGIPFPL*IQGSPW
Trigger: CCAAGGGCTACCCTGGATCCAGAGGGGAAAAGGGAT...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTAGGCCCAGGCTTGCCTaGTGGGCCCATAACTCCACT +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGRPRLA*WAHNST
Trigger: AGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCT...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAAGTACAGAGATCTCTaGTCTCTGCGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNKYRDL*SLRKAM
Trigger: CATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTT...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAGCTCGAGATTCTTCATGTCTaGGGAGAGAAGCGGACTTCG +
Preference number: 4 (lower is better)
Translates to: KAAHRHARLIILLKREELEILHV*GEKRTS
Trigger: CGAAGTCCGCTTCTCTCCCCAGACATGAAGAATCTC...GAGCTCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000681097.1
CDS-3UTR CCA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATCACTTCCCTGCTTTGTaGTTCATAGGCCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNHFPAL*FIGLER
Trigger: TCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTG...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGGCTGGGAAGGGCTGCTaGGATTGGAAGAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: SQTELTACLSSRNLSLFLAGKGC*DWKNAV
Trigger: AACAGCGTTCTTCCAATCTCAGCAGCCCTTCCCAGC...CAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCAGGGTCCTCGGTGTCCTaGTATCCCAGGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSGSSVS*YPRFTF
Trigger: AAAGGTGAACCTGGGATAGCAGGACACCGAGGACCC...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAATGCTTCTGCTCCAGATaGCAGGGGTCTGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIECFCSR*QGSGAS
Trigger: ACTGGCTCCAGACCCCTGGCATCTGGAGCAGAAGCA...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR GCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTCACCCCGAGAGAACGTaGCCACTTCCCTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGHPERT*PLPCFV
Trigger: CACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTG...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAACACCCCGAGAGAACGTaGCCACTTCCCTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIEHPERT*PLPCFV
Trigger: CACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTG...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGCAGCTCACAGACATaGACGACTAATAATCTTATT +
Preference number: 4 (lower is better)
Translates to: MDMRDIFETGGKVQREPRGSSQT*TTNNLI
Trigger: AATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCC...TCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCACAGGGCTGCCCATGTaGCTGTCTCTAAAGACGCCA +
Preference number: 4 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGTGLPM*LSLKTP
Trigger: TGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGT...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTCCCAGGCTTGCCTGGTaGGCCCATAACTCCACTATC +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGPRLAW*AHNSTI
Trigger: GATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGG...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAGACTTCGGCCACCTCTaGAGAATGGTGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIEDFGHL*RMVVGT
Trigger: TGTTCCCACCACCATTCTTCAGAGGTGGCCGAAGTC...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCTTTCTACTTGAGGTCTaGTGTGGGGGTGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGFLLEV*CGGGPH
Trigger: GTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAA...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTGCCACCTCTGAAGAATaGTGGTGGGAACAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGATSEE*WWEQWW
Trigger: CCACCACTGTTCCCACCACCATTCTTCAGAGGTGGC...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTATCCAGGGTAGCCCTTaGAGCCCATTGGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGIQGSP*SPLVLL
Trigger: CAAGAGGACCAATGGGCTCCAAGGGCTACCCTGGAT...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCGTCACACAGTCCTCATaGGTCTCCTGGACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGVTQSS*VSWTGN
Trigger: ATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGAC...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR TCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCAGTCACACAGTCCTCATaGGTCTCCTGGACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSVTQSS*VSWTGN
Trigger: ATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGAC...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCATTCCTCACTGCTGTTTaGGTGCGCGTGTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSFLTAV*VRVCLC
Trigger: ACACAAACACACGCGCACGCAAACAGCAGTGAGGAA...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603808.5
CDS-3UTR GCA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGATGTAGCAGTACTGGGTaGATTGCAGGTCTCCATATG +
Preference number: 4 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGCSSTG*IAGLHM
Trigger: CATATGGAGACCTGCAATGCACCCAGTACTGCTACA...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCAACAAAGACATCTTCCTaGAGGCCCGGGAAATCCTCT +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSTKTSS*RPGKSS
Trigger: AGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGT...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR GCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTCAGTACTGGGTGCATTaGAGGTCTCCATATGACCCA +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGQYWVH*RSPYDP
Trigger: TGGGTCATATGGAGACCTGCAATGCACCCAGTACTG...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR GCA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAACTCAGGGGAGTATCTaGCTAAGGACCAAGGAGACA +
Preference number: 4 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIETQGSI*LRTKET
Trigger: TGTCTCCTTGGTCCTTAGGCAGATACTCCCCTGAGT...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGACTCTCAAGCTCCTCCTaGTTGTTGACCACAAAAATC +
Preference number: 4 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGLSSSS*LLTTKI
Trigger: GATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAG...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAGAGATTCTTCATGTCTaGGGAGAGAAGCGGACTTCG +
Preference number: 4 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIEEILHV*GEKRTS
Trigger: CGAAGTCCGCTTCTCTCCCCAGACATGAAGAATCTC...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000681097.1
CDS-3UTR GCA 90 bp TTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGTAGCAGTACTGGGTaGATTGCAGGTCTCCATATG +
Preference number: 4 (lower is better)
Translates to: LTACLSSRNLSLFLSHKGCSSTG*IAGLHM
Trigger: CATATGGAGACCTGCAATGCACCCAGTACTGCTACA...ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CCA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACTCTCAAGCTCCTCCTaGTTGTTGACCACAAAAATC +
Preference number: 4 (lower is better)
Translates to: QTELTACLSSRNLSLFLSLSSSS*LLTTKI
Trigger: GATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAG...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCCCCGGACGGCCAGGTaGACCAGAAGGCCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: DDSGEAAASSVGRSPPSPPRTAR*TRRPRL
Trigger: AAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGG...AGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCCCCGGACGGCCAGGTaGACCAGAAGGCCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: VSENACTFRWSGAERPVLPRTAR*TRRPRL
Trigger: AAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGG...GAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACCCAGAAGGCCCAGGCTaGCCTGGTGGGCCCATAACT +
Preference number: 5 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHPEGPG*PGGPIT
Trigger: AGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGG...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS GCA 90 bp TGGTGGTGGGAACAGTGGTGGTGGAGGAGGCGTCAGCAGGCAGCATaGTTTGTGGCCACCACGCTTCTTCTGATCCAGGCTGGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: WWWEQWWWRRRQQAA*FVATTLLLIQAGKG
Trigger: GCCCTTCCCAGCCTGGATCAGAAGAAGCGTGGTGGCCACAAAGCATGCTGCCTGCTGACGCCTCCTCCACCACCACTGTTCCCACCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000605797.1
ENST00000679838.1
ENST00000681097.1
CDS GCA 90 bp CCGGGAGGCCCAGGGGAGCCTAGCGAGCCTTGCATGCACGGGGACTaGGAGGTCTCCAGTTCCAGCATGAGATTCTTCATGTCGGACTTC +
Preference number: 5 (lower is better)
Translates to: PGGPGEPSEPCMHGD*EVSSSSMRFFMSDF
Trigger: GAAGTCCGACATGAAGAATCTCATGCTGGAACTGGAGACCTCGCAGTCCCCGTGCATGCAAGGCTCGCTAGGCTCCCCTGGGCCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679838.1
CDS-3UTR CAA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGAGCAGGCAGCATGCTTaGTGGCCACCACGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRSRQHA*WPPRFF
Trigger: GAAGAAGCGTGGTGGCCACAAAGCATGCTGCCTGCT...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACAGCCCTTGGAGCCCATaGGTCCTCTTGACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHSPWSP*VLLTLA
Trigger: TGCCAGGGTCAAGAGGACCAATGGGCTCCAAGGGCT...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCCCAGAAGGCCCAGGCTaGCCTGGTGGGCCCATAACT +
Preference number: 5 (lower is better)
Translates to: PLPCFVVHRPRETRQRAAPEGPG*PGGPIT
Trigger: AGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGG...GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGGCCAGGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGCCCCGGACGGCCAGGTaGACCAGAAGGCCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: GPGHGQFDDSGEAAASSVPRTAR*TRRPRL
Trigger: AAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGG...CACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CGGCCCTCAGGTGAAGTAGCGGCAGGGCGTGGAGTCGATGTAGCAGTACTGGGTTTCTCTAGCCTCTGCTaGGGGCAAGCCTGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: RPSGEVAAGRGVDVAVLGFSSLC*GQAWVR
Trigger: CCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAA...ACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGAGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCACAAGAGCCGCCCCTTaGGGAAACACTGAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTATRAAP*GNTEKR
Trigger: CCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGT...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp AGAGGGGTGGAATTTGGCCAGGCTTGGCAGCCCCCGGAAGAAGTCTaGATGCCTGGCAGTAGCAGGCTCCTGCTCAGAACAGCGCAGACC +
Preference number: 5 (lower is better)
Translates to: RGVEFGQAWQPPEEV*MPGSSRLLLRTAQT
Trigger: GGTCTGCGCTGTTCTGAGCAGGAGCCTGCTACTGCCAGGCATTCAGACTTCTTCCGGGGGCTGCCAAGCCTGGCCAAATTCCACCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603469.1
CDS GCA 90 bp AGCCGGAGACAGGCTGAGATTCGTCACGCCTCTGAGTGCTCCCAGTaGCTGGCCTGTTTGGCATTAGGGGTGGGAGTTGGCCAATCCCTG +
Preference number: 5 (lower is better)
Translates to: SRRQAEIRHASECSQ*LACLALGVGVGQSL
Trigger: CAGGGATTGGCCAACTCCCACCCCTAATGCCAAACAGGCCAGGCACTGGGAGCACTCAGAGGCGTGACGAATCTCAGCCTGTCTCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS GCA 90 bp GGGAACACTAGCCGGAGACAGGCTGAGATTCGTCACGCCTCTGAGTaGTCCCAGTGCCTGGCCTGTTTGGCATTAGGGGTGGGAGTTGGC +
Preference number: 5 (lower is better)
Translates to: GNTSRRQAEIRHASE*SQCLACLALGVGVG
Trigger: GCCAACTCCCACCCCTAATGCCAAACAGGCCAGGCACTGGGAGCACTCAGAGGCGTGACGAATCTCAGCCTGTCTCCGGCTAGTGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CAA 90 bp CCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCAGCCCTTGGAGCCCATaGGTCCTCTTGACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PLPCFVVHRPRETRQRAASPWSP*VLLTLA
Trigger: TGCCAGGGTCAAGAGGACCAATGGGCTCCAAGGGCT...GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGCCAGAAGGCCCAGGCTaGCCTGGTGGGCCCATAACT +
Preference number: 5 (lower is better)
Translates to: VSRRQRGRALARNALPREPEGPG*PGGPIT
Trigger: AGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGG...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCGCCCACTTCCCTGCTTaGTGGTTCATAGGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGAHFPA*WFIGLE
Trigger: CTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGC...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGACAAGAGCCGCCCCTTaGGGAAACACTGAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRTRAAP*GNTEKR
Trigger: CCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGT...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp GCGAGCCTTGCATGCACGGGGACTGCGAGGTCTCCAGTTCCAGCATaGGATTCTTCATGTCTGGGGAGAGAAGCGGACTTCGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: ASLACTGTARSPVPA*DSSCLGREADFGHL
Trigger: GAGGTGGCCGAAGTCCGCTTCTCTCCCCAGACATGAAGAATCTCATGCTGGAACTGGAGACCTCGCAGTCCCCGTGCATGCAAGGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000681097.1
CDS GCA 90 bp GGGTGGAATTTGGCCAGGCTTGGCAGCCCCCGGAAGAAGTCTGAATaGCTGGCAGTAGCAGGCTCCTGCTCAGAACAGCGCAGACCATAC +
Preference number: 5 (lower is better)
Translates to: GWNLARLGSPRKKSE*LAVAGSCSEQRRPY
Trigger: GTATGGTCTGCGCTGTTCTGAGCAGGAGCCTGCTACTGCCAGGCATTCAGACTTCTTCCGGGGGCTGCCAAGCCTGGCCAAATTCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603469.1
CDS-3UTR CAA 90 bp GGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCTTGGAGCCCATaGGTCCTCTTGACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GHGQFDDSGEAAASSVGRSPWSP*VLLTLA
Trigger: TGCCAGGGTCAAGAGGACCAATGGGCTCCAAGGGCT...GCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCCAGAAGGCCCAGGCTaGCCTGGTGGGCCCATAACT +
Preference number: 5 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLPEGPG*PGGPIT
Trigger: AGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGG...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGGCCGAAGGCAATGGCGTTTaGGGTGTTCAGCCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: HLWETGSTYRHQVMVHQAEGNGV*GVQPLK
Trigger: CTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTC...GGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCTGGCCAATCCCTGCTTaGATGTTGCTTCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGWPIPA*MLLLLQ
Trigger: CTGGAGCAGAAGCAACATCAAAGCAGGGATTGGCCA...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CAA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCACTTCCCTGCTTaGTGGTTCATAGGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTAHFPA*WFIGLE
Trigger: CTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGC...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ACGGTGACAGCGGATGCAGTCGTCACCCACATCGCTGTTACCGTCGTCACACTCTTCTCTAGCCTCTGCTaGGGGCAAGCCTGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: TVTADAVVTHIAVTVVTLFSSLC*GQAWVR
Trigger: CCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAA...GAGTGTGACGACGGTAACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGTGCCCAGGTGTGGGCTaGTGCAGGTCACACAGTCCT +
Preference number: 5 (lower is better)
Translates to: TCPLPCFVVHRPRETRQRCPGVG*CRSHSP
Trigger: AGGACTGTGTGACCTGCACAAGCCCACACCTGGGCA...CCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGTCTCGCATGTCAGGTAGCCAAAGTCAGAGCCGTCACAGTCCTCCACACCCTCTGCCCAGGTGTGGGCTaGTGCAGGTCACACAGTCCT +
Preference number: 5 (lower is better)
Translates to: GLACQVAKVRAVTVLHTLCPGVG*CRSHSP
Trigger: AGGACTGTGTGACCTGCACAAGCCCACACCTGGGCA...GAGGGTGTGGAGGACTGTGACGGCTCTGACTTTGGCTACCTGACATGCGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp ACCCTCATGCCGGTGACCATCTCCACAGTAGGCACGGTGACAGCCTaGGGGGACATAAGGAGGTGCAGTCTTGAGAAGGAGCAGAGGCGA +
Preference number: 5 (lower is better)
Translates to: TLMPVTISTVGTVTA*GDIRRCSLEKEQRR
Trigger: TCGCCTCTGCTCCTTCTCAAGACTGCACCTCCTTATGTCCCCTCAGGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS-3UTR CAA 90 bp GTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTTGTCACACAAAGGTaGGTGGAGACGGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: VRMPARFGGQGRRGLYSRFVTQR*VETGPG
Trigger: TCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAA...TCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGCTGCCTTTGTCACACAAAGGTaGGTGGAGACGGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: PLPCFVVHRPRETRQRAAFVTQR*VETGPG
Trigger: TCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAA...GGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CCACAAGAGCCGCCCCTTTGGGAAACACTGAGAAGAGGAGCCTCTTCTCTAGCCTTCTCTAGCCTCTGCTaGGGGCAAGCCTGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PQEPPLWETLRRGASSLAFSSLC*GQAWVR
Trigger: CCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAA...GGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTACAAGAGCCGCCCCTTaGGGAAACACTGAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: DDSGEAAASSVGRSPPSPTRAAP*GNTEKR
Trigger: CCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGT...AGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGTGCCCAGGTGTGGGCTaGTGCAGGTCACACAGTCCT +
Preference number: 5 (lower is better)
Translates to: HENNISPGLAVEAKGTGLCPGVG*CRSHSP
Trigger: AGGACTGTGTGACCTGCACAAGCCCACACCTGGGCA...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp ACAGGGCTGCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTTaGTGTCACCTGTGGGAGACCGGGTCCACCTTGGAGATGTCTTTC +
Preference number: 5 (lower is better)
Translates to: TGLPMCLSLKTPPSG*CHLWETGSTLEMSF
Trigger: GAAAGACATCTCCAAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603752.1
CDS-3UTR CAA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTCTTCCTCACTGCTGTTaGCGTGCGCGTGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPLPHCC*RARVFV
Trigger: CACAAACACACGCGCACGCAAACAGCAGTGAGGAAG...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383786.9
ENST00000603808.5
CDS-3UTR CAA 90 bp GGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGAGCAGGCAGCATGCTTaGTGGCCACCACGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSQPRLSLKYRDLWSLRKSRQHA*WPPRFF
Trigger: GAAGAAGCGTGGTGGCCACAAAGCATGCTGCCTGCT...CTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp TTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAAGAGATCAAAGCCCTTGGAGCCCATaGGTCCTCTTGACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: FRWSGAERPVLQIPQRDQSPWSP*VLLTLA
Trigger: TGCCAGGGTCAAGAGGACCAATGGGCTCCAAGGGCT...TTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GAAATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCACCCCGGACGGCCAGGTaGACCAGAAGGCCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: EMDMRDIFETGGKVQREPPRTAR*TRRPRL
Trigger: AAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGG...TGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTGAAGGCAATGGCGTTTaGGGTGTTCAGCCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: DDSGEAAASSVGRSPPSPEGNGV*GVQPLK
Trigger: CTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTC...AGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACCAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RTKETPTACPGVGLCRSHQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...GTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGTGTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTATTTGTCACACAAAGGTaGGTGGAGACGGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: SVSENACTFRWSGAERPVFVTQR*VETGPG
Trigger: TCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAA...TACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTGGAACAGGTCTCAGGTaGGGCATGTGGAAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: DDSGEAAASSVGRSPPSPGTGLR*GMWKVF
Trigger: GAAAACCTTCCACATGCCCAACCTGAGACCTGTTCC...AGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGGAGTATCTGCCTAAGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCGGAACAGGTCTCAGGTaGGGCATGTGGAAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: GSICLRTKETPTACPGVGGTGLR*GMWKVF
Trigger: GAAAACCTTCCACATGCCCAACCTGAGACCTGTTCC...GCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GTCAGCAGGAGGCAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGGCCCACTTCCCTGCTTaGTGGTTCATAGGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: VSRRQRGRALARNALPREAHFPA*WFIGLE
Trigger: CTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGC...CTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp TGTGTGACACTGGTGAGCCCAGCCTTGTGTCCCTGGGGAGCCACATaGTCTTCAGCAAAGACCTCTGCTCTCACACGATGGGAGGGTGTT +
Preference number: 5 (lower is better)
Translates to: CVTLVSPALCPWGAT*SSAKTSALTRWEGV
Trigger: AACACCCTCCCATCGTGTGAGAGCAGAGGTCTTTGCTGAAGATCATGTGGCTCCCCAGGGACACAAGGCTGGGCTCACCAGTGTCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS TCA 90 bp AGTAGGCACGGTGACAGCCTGAGGGGACATAAGGAGGTGCAGTCTTaGGAAGGAGCAGAGGCGATAGGCTTGCCTCAGCTTGTAAGGACC +
Preference number: 5 (lower is better)
Translates to: SRHGDSLRGHKEVQS*EGAEAIGLPQLVRT
Trigger: GGTCCTTACAAGCTGAGGCAAGCCTATCGCCTCTGCTCCTTCTCAAGACTGCACCTCCTTATGTCCCCTCAGGCTGTCACCGTGCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS CCA 90 bp ACCTCCATTAAGCTTCACACTCCTCCAGGGACTGCCCACAGGCTCTaGTCCCACAGCGATGTGCCATGGGACAAGAAGAAGGAGATCCTG +
Preference number: 5 (lower is better)
Translates to: TSIKLHTPPGTAHRL*SHSDVPWDKKKEIL
Trigger: CAGGATCTCCTTCTTCTTGTCCCATGGCACATCGCTGTGGGACCAGAGCCTGTGGGCAGTCCCTGGAGGAGTGTGAAGCTTAATGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS-3UTR CAA 90 bp GGGCCAGGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGCTGCTGCGGAGCCTaGCTTATCTCTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: GPGHGQFDDSGEAAASSVGCCGA*LISAFL
Trigger: GAGAAAAGCAGAGATAAGCAAGGCTCCGCAGCAGCC...CACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGTCCCAGGTTCACCTTTaGGACCCATTTCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTSQVHL*DPFHLS
Trigger: AGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGA...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCAATCCTCTTTCCCCTTaGGGTCCCATTATAAGTTGT +
Preference number: 5 (lower is better)
Translates to: VEKLLPVLWGAAHLLLTANPLSP*GPIISC
Trigger: ACAACTTATAATGGGACCCAAAGGGGAAAGAGGATT...GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CAA 90 bp GGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCGAAGGCAATGGCGTTTaGGGTGTTCAGCCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: GHGQFDDSGEAAASSVGREGNGV*GVQPLK
Trigger: CTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTC...GCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCGAAGGCAATGGCGTTTaGGGTGTTCAGCCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSEGNGV*GVQPLK
Trigger: CTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTC...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCGGGAAGGCAATGGCGTTTaGGGTGTTCAGCCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: TCPLPCFVVHRPRETRQREGNGV*GVQPLK
Trigger: CTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTC...CCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCATTTGTCACACAAAGGTaGGTGGAGACGGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: DMASLMTVEKLLPVLWGAFVTQR*VETGPG
Trigger: TCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAA...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGGAGCCAGCCAAGGCTGTCCTTGAAGTACAGAGATCTCTGGTCTCTGCGGAAGTTTGTCACACAAAGGTaGGTGGAGACGGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GSQPRLSLKYRDLWSLRKFVTQR*VETGPG
Trigger: TCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAA...CTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCGGAACAGGTCTCAGGTaGGGCATGTGGAAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: GHGQFDDSGEAAASSVGRGTGLR*GMWKVF
Trigger: GAAAACCTTCCACATGCCCAACCTGAGACCTGTTCC...GCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCTCGACTAATAATCTTATaGAAAAGGGAGGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GEAAASSVGRSPPSPHGPRLIIL*KREELR
Trigger: CCTGAGCTCCTCCCTTTTCAATAAGATTATTAGTCG...AGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTGGGGTGGACCTCACCTaGGAGATGTCTTTCCAGAAT +
Preference number: 5 (lower is better)
Translates to: ENACTFRWSGAERPVLQIGVDLT*EMSFQN
Trigger: ATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCC...AATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGTGTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTAGGGGTGGACCTCACCTaGGAGATGTCTTTCCAGAAT +
Preference number: 5 (lower is better)
Translates to: SVSENACTFRWSGAERPVGVDLT*EMSFQN
Trigger: ATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCC...TACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp GGAGTGAGGGTTGGAAGACTGCTGAGCCCCAGTGAGGGTGCATGGTaGCTCTCATCTGTCAACAGAGAGCTTCTGTGTGACACTGGTGAG +
Preference number: 5 (lower is better)
Translates to: GVRVGRLLSPSEGAW*LSSVNRELLCDTGE
Trigger: CTCACCAGTGTCACACAGAAGCTCTCTGTTGACAGATGAGAGTCACCATGCACCCTCACTGGGGCTCAGCAGTCTTCCAACCCTCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS GCA 90 bp AGCCTTGTGTCCCTGGGGAGCCACATGATCTTCAGCAAAGACCTCTaGTCTCACACGATGGGAGGGTGTTGGAGTATGGATCCCAGCGTT +
Preference number: 5 (lower is better)
Translates to: SLVSLGSHMIFSKDL*SHTMGGCWSMDPSV
Trigger: AACGCTGGGATCCATACTCCAACACCCTCCCATCGTGTGAGAGCAGAGGTCTTTGCTGAAGATCATGTGGCTCCCCAGGGACACAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS-3UTR CAA 90 bp AGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCAATCCTCTTTCCCCTTaGGGTCCCATTATAAGTTGT +
Preference number: 5 (lower is better)
Translates to: SGEAAASSVGRSPPSPHGNPLSP*GPIISC
Trigger: ACAACTTATAATGGGACCCAAAGGGGAAAGAGGATT...GCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CAA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCAATCCTCTTTCCCCTTaGGGTCCCATTATAAGTTGT +
Preference number: 5 (lower is better)
Translates to: GRALARNALPRESPLQLANPLSP*GPIISC
Trigger: ACAACTTATAATGGGACCCAAAGGGGAAAGAGGATT...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CAA 90 bp TGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCCCAGCAGGAATTTGTCCTaGTTTTTGTCACACAAAGGT +
Preference number: 5 (lower is better)
Translates to: WRSCCQFCGAQPTFSSRPSRNLS*FLSHKG
Trigger: ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCT...GGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGTTCTCTAGCCTCTGCTaGGGGCAAGCCTGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMFSSLC*GQAWVR
Trigger: CCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAA...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp GAAAGGCTCATGGGGCCTGGGGCCCTGACAGTGACAGTCAGAGGCTaGATCAAAGCCAGCTACTGCCTGCCTCTGGATTTCTTTATTGGA +
Preference number: 5 (lower is better)
Translates to: ERLMGPGALTVTVRG*IKASYCLPLDFFIG
Trigger: TCCAATAAAGAAATCCAGAGGCAGGCAGTAGCTGGCTTTGATTCAGCCTCTGACTGTCACTGTCAGGGCCCCAGGCCCCATGAGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680240.1
ENST00000681222.1
CDS-3UTR CAA 90 bp ACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGAAATTCCCAAAGTCATaGGATTCAGGACAACCATGC +
Preference number: 5 (lower is better)
Translates to: TVEKLLPVLWGAAHLLLTKFPKS*DSGQPC
Trigger: GCATGGTTGTCCTGAATCCAATGACTTTGGGAATTT...CGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGAGCAGGCAGCATGCTTaGTGGCCACCACGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMSRQHA*WPPRFF
Trigger: GAAGAAGCGTGGTGGCCACAAAGCATGCTGCCTGCT...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCAGCTCCTCCTGGTTGTaGACCACAAAAATCACAGGA +
Preference number: 5 (lower is better)
Translates to: HGQFDDSGEAAASSVGRSSSSWL*TTKITG
Trigger: TCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCT...GCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CAA 90 bp AAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGAGACCGGGTCCACCTACAGAGCTCCTCCTGGTTGTaGACCACAAAAATCACAGGA +
Preference number: 5 (lower is better)
Translates to: KDATLRLMSPVGDRVHLQSSSWL*TTKITG
Trigger: TCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCT...CTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CAA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTAGCTCCTCCTGGTTGTaGACCACAAAAATCACAGGA +
Preference number: 5 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPSSSWL*TTKITG
Trigger: TCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCT...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CAA 90 bp CAAAGAGGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGAGCTCCTCCTGGTTGTaGACCACAAAAATCACAGGA +
Preference number: 5 (lower is better)
Translates to: QRGRALARNALPRESPLQSSSWL*TTKITG
Trigger: TCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCT...CTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CAA 90 bp GTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATCAAGCTCCTCCTGGTaGTTGACCACAAAAATCACA +
Preference number: 5 (lower is better)
Translates to: VRMPARFGGQGRRGLYSRSSSSW*LTTKIT
Trigger: TGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGA...TCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CAA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCATCAAGCTCCTCCTGGTaGTTGACCACAAAAATCACA +
Preference number: 5 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPSSSSW*LTTKIT
Trigger: TGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGA...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CAA 90 bp GGTAGAGCTCTGGCCAGGAACGCTCTGCCTAGAGAGAGCCCTCTGCAGCTGGCCAGCAGGAATTTGTCCTaGTTTTTGTCACACAAAGGT +
Preference number: 5 (lower is better)
Translates to: GRALARNALPRESPLQLASRNLS*FLSHKG
Trigger: ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCT...GGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACGGCTTAGTAGCAGGAATTaGTCCTTGTTTTTGTCACAC +
Preference number: 5 (lower is better)
Translates to: QWRSCCQFCGAQPTFSSRLSSRN*SLFLSH
Trigger: GTGTGACAAAAACAAGGACAAATTCCTGCTACTAAG...CCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTACAAGAGCCGCCCCTTaGGGAAACACTGAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GNFYLRSAVGVDLTLEMSTRAAP*GNTEKR
Trigger: CCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGT...AGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGCTTCCTCACTGCTGTTaGCGTGCGCGTGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMLPHCC*RARVFV
Trigger: CACAAACACACGCGCACGCAAACAGCAGTGAGGAAG...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603808.5
CDS-3UTR CAA 90 bp CTTGTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGGCTGCTGCGGAGCCTaGCTTATCTCTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: LVFVTQRLVETGPGHGQFGCCGA*LISAFL
Trigger: GAGAAAAGCAGAGATAAGCAAGGCTCCGCAGCAGCC...AAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCAGATTCCCCAAAAAATTCCCAAAGTCATaGGATTCAGGACAACCATGC +
Preference number: 5 (lower is better)
Translates to: PARFGGQGRRGLYSRFPKKFPKS*DSGQPC
Trigger: GCATGGTTGTCCTGAATCCAATGACTTTGGGAATTT...TTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCAAAATTCCCAAAGTCATaGGATTCAGGACAACCATGC +
Preference number: 5 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPKFPKS*DSGQPC
Trigger: GCATGGTTGTCCTGAATCCAATGACTTTGGGAATTT...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAGCAGGCAGCATGCTTaGTGGCCACCACGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSAVGVDLTLEMSFQNKTSRQHA*WPPRFF
Trigger: GAAGAAGCGTGGTGGCCACAAAGCATGCTGCCTGCT...AGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CATGAAAACAACATCTCCCCAGGCCTCGCAGTAGAGGCGAAGGGAACAGGGCTGTCCCAGGTTCACCTTTaGGACCCATTTCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: HENNISPGLAVEAKGTGLSQVHL*DPFHLS
Trigger: AGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGA...CAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AAAGACGCCACCCTCAGGTTGATGTCACCTGTGGGAGACCGGGTCCACCTACAGTCAAGCTCCTCCTGGTaGTTGACCACAAAAATCACA +
Preference number: 5 (lower is better)
Translates to: KDATLRLMSPVGDRVHLQSSSSW*LTTKIT
Trigger: TGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGA...CTGTAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CAA 90 bp CAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCAAGCTCCTCCTGGTaGTTGACCACAAAAATCACA +
Preference number: 5 (lower is better)
Translates to: QFDDSGEAAASSVGRSPPSSSSW*LTTKIT
Trigger: TGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGA...AGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CAA 90 bp GAGAGACCCGACAGCGGGCTGCCCAGTGTGAGTGAGAATGCCTGCACGTTTCGGAATTTGTCCTTGTTTTaGTCACACAAAGGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: ERPDSGLPSVSENACTFRNLSLF*SHKGWW
Trigger: CCACCAACCTTTGTGTGACAAAAACAAGGACAAATT...CCGAAACGTGCAGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTCTCCTCACCTTAGTAGCAGGAATTaGTCCTTGTTTTTGTCACAC +
Preference number: 5 (lower is better)
Translates to: DSGEAAASSVGRSPPSPHLSSRN*SLFLSH
Trigger: GTGTGACAAAAACAAGGACAAATTCCTGCTACTAAG...GTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGGACCAAGGAGACACCAACAGCCTGCCCAGGTGTGGGCTTGTGCAGGTCACACCGACTAATAATCTTATaGAAAAGGGAGGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RTKETPTACPGVGLCRSHRLIIL*KREELR
Trigger: CCTGAGCTCCTCCCTTTTCAATAAGATTATTAGTCG...GTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GTGAGTGAGAATGCCTGCACGTTTCGGTGGTCAGGGGCGGAGAGGCCTGTACTCCGACTAATAATCTTATaGAAAAGGGAGGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VSENACTFRWSGAERPVLRLIIL*KREELR
Trigger: CCTGAGCTCCTCCCTTTTCAATAAGATTATTAGTCG...GAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCATCAAGCTCCTCCTGGTaGTTGACCACAAAAATCTGC +
Preference number: 5 (lower is better)
Translates to: DMASLMTVEKLLPVLWGASSSSW*LTTKIC
Trigger: GCAGATTTTTGTGGTCAACAACCAGGAGGAGCTTGA...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681097.1
CDS-3UTR CAA 90 bp TCCCTCCAGCTGGTAAAAATTGGGCAATTTCTACTTGAGGTCTGCTGTGGGGGTGGCTGCTGCGGAGCCTaGCTTATCTCTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SLQLVKIGQFLLEVCCGGGCCGA*LISAFL
Trigger: GAGAAAAGCAGAGATAAGCAAGGCTCCGCAGCAGCC...ACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCCTGGGCAGAGCAGGCAGCATGCTTaGTGGCCACCACGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGQVGSQYFFTVKSFPGQSRQHA*WPPRFF
Trigger: GAAGAAGCGTGGTGGCCACAAAGCATGCTGCCTGCT...CTGCCCAGGAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCAAATTTGTCCTTGTTTTaGTCACACAAAGGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: GQFDDSGEAAASSVGRSPNLSLF*SHKGWW
Trigger: CCACCAACCTTTGTGTGACAAAAACAAGGACAAATT...TGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp TGTCACCTGTGGGAGACCGGGTCCACCTACAGACACCAGGTGATGGTCCACCAGCTTAGTAGCAGGAATTaGTCCTTGTTTTTGTCACAC +
Preference number: 5 (lower is better)
Translates to: CHLWETGSTYRHQVMVHQLSSRN*SLFLSH
Trigger: GTGTGACAAAAACAAGGACAAATTCCTGCTACTAAG...CTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTGCCCACTTCCCTGCTTaGTGGTTCATAGGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: QFLLEVCCGGGPHLGDVFAHFPA*WFIGLE
Trigger: CTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGC...AAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATTGCCCAGGTGTGGGCTaGTGCAGGTCACACAGTCCT +
Preference number: 5 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNCPGVG*CRSHSP
Trigger: AGGACTGTGTGACCTGCACAAGCCCACACCTGGGCA...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGTTTGGGCAATTTCTACTaGAGGTCTGCTGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: DMRDIFETGGKVQREPRGLGNFY*RSAVGV
Trigger: CACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAA...ACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAATTTGACGCCACCCTCAGGTaGATGTCACCTGTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: ASYKNPRVSLQLVKIGQFDATLR*MSPVGD
Trigger: GTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTC...AAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp AGATCTGGCCAGGACCCCAGGGAAAACACTGCAGTCGGAGGAGACTaGACTTTCCTGAGCGAGTTGACAGGTATTCGTACAATCAGAATG +
Preference number: 5 (lower is better)
Translates to: RSGQDPRENTAVGGD*TFLSELTGIRTIRM
Trigger: CATTCTGATTGTACGAATACCTGTCAACTCGCTCAGGAAAGTTCAGTCTCCTCCGACTGCAGTGTTTTCCCTGGGGTCCTGGCCAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS-3UTR CAA 90 bp CAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACCCCGGACGGCCAGGTaGACCAGAAGGCCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: QTELTACLSSRNLSLFLSPRTAR*TRRPRL
Trigger: AAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGG...TGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAGCCCACCTTAATCCTCTTTCCCCTTaGGGTCCCATTATAAGTTGT +
Preference number: 5 (lower is better)
Translates to: SLMTVEKLLPVLWGAAHLNPLSP*GPIISC
Trigger: ACAACTTATAATGGGACCCAAAGGGGAAAGAGGATT...AAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CAA 90 bp GACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAAATCCTCTTTCCCCTTaGGGTCCCATTATAAGTTGT +
Preference number: 5 (lower is better)
Translates to: DMASLMTVEKLLPVLWGANPLSP*GPIISC
Trigger: ACAACTTATAATGGGACCCAAAGGGGAAAGAGGATT...TGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
CDS-3UTR CAA 90 bp CAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QFLLEVCCGGGPHLGDVFQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...AAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGACATGGCCAGTTTGATGACAGTGGAGAAGCTGCTGCCAGTTCTGTGGGGCGCAATTTGTCCTTGTTTTaGTCACACAAAGGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: GHGQFDDSGEAAASSVGRNLSLF*SHKGWW
Trigger: CCACCAACCTTTGTGTGACAAAAACAAGGACAAATT...GCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGAACAGGTCTCAGGTaGGGCATGTGGAAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: MDMRDIFETGGKVQREPRGTGLR*GMWKVF
Trigger: GAAAACCTTCCACATGCCCAACCTGAGACCTGTTCC...TCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTCCAGAATAAAACTAAGCTTGGGCAATTTCTACTaGAGGTCTGCTGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LLWGWTSPWRCLSRIKLSLGNFY*RSAVGV
Trigger: CACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAA...GCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp CAATGGCGTTTTGGGTGTTCAGCCTCTCAAGCTCCTCCTGGTTGTTaGCCACAAAAATCTGCCAGAGAACACACTGGTGAGGATTCCAGA +
Preference number: 5 (lower is better)
Translates to: QWRFGCSASQAPPGC*PQKSAREHTGEDSR
Trigger: TCTGGAATCCTCACCAGTGTGTTCTCTGGCAGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAACGCCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS-3UTR CAA 90 bp GACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAGGTTCCCAGGTTCACCTTTaGGACCCATTTCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: DMRDIFETGGKVQREPRGSQVHL*DPFHLS
Trigger: AGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGA...ACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp TTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATGTCCCAGGTTCACCTTTaGGACCCATTTCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: FLSHKGWWRRGQDMASLMSQVHL*DPFHLS
Trigger: AGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGA...CATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGACCAGAAGGCCCAGGCTaGCCTGGTGGGCCCATAACT +
Preference number: 5 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGPEGPG*PGGPIT
Trigger: AGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGG...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ATGGACATGAGGGACATTTTTGAGACAGGGGGCAAAGTGCAGAGAGAGCCAAGAAGCTCCTCCTGGTTGTaGACCACAAAAATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: MDMRDIFETGGKVQREPRSSSWL*TTKICR
Trigger: CCTGCAGATTTTTGTGGTCAACAACCAGGAGGAGCT...TCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000681097.1
CDS GCA 90 bp AAAGCTGAAGATAAATTCCCAAAGTCATTGGATTCAGGACAACCATaGTGGCCAGGGTCTGGCGAGGGTCAAGTTAGAAAGGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: KAEDKFPKSLDSGQP*WPGSGEGQVRKEAA
Trigger: AGCAGCCTCCTTTCTAACTTGACCCTCGCCAGACCCTGGCCAGCATGGTTGTCCTGAATCCAATGACTTTGGGAATTTATCTTCAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS GCA 90 bp ACAGAATCTCTATCCTTGGGCTGCTCAACAGTGGGAAGAGGGGTTTaGACACTACACTCTAGCATTCCTTCTGAAGTGAGAGGAGTGTCT +
Preference number: 5 (lower is better)
Translates to: TESLSLGCSTVGRGV*TLHSSIPSEVRGVS
Trigger: AGACACTCCTCTCACTTCAGAAGGAATGCTAGAGTGTAGTGTGCAAACCCCTCTTCCCACTGTTGAGCAGCCCAAGGATAGAGATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS-3UTR CAA 90 bp CAATTTCTACTTGAGGTCTGCTGTGGGGGTGGACCTCACCTTGGAGATGTCTTTTCCCAGGTTCACCTTTaGGACCCATTTCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: QFLLEVCCGGGPHLGDVFSQVHL*DPFHLS
Trigger: AGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGA...AAAGACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CCCTACTCAGGAAAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATGAAGGCAATGGCGTTTaGGGTGTTCAGCCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: PYSGKMVMKGSSQTCTTNEGNGV*GVQPLK
Trigger: CTTGAGAGGCTGAACACCCAAAACGCCATTGCCTTC...ATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAACAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: IASYKNPRVSLQLVKIGQQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...TTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GGGCAAGCCTGGGTCAGGTGGGTTCTCAGTACTTTTTCACAGTTAAGTCTTTTCATCCCTGCTTTGATGTaGCTTCTGCTCCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: GQAWVRWVLSTFSQLSLFIPALM*LLLQMP
Trigger: TGGCATCTGGAGCAGAAGCAACATCAAAGCAGGGAT...GAAAAGACTTAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CAA 90 bp AGAACGTGCCCACTTCCCTGCTTTGTGGTTCATAGGCCTAGAGAGACCCGACAGCTTAGTAGCAGGAATTaGTCCTTGTTTTTGTCACAC +
Preference number: 5 (lower is better)
Translates to: RTCPLPCFVVHRPRETRQLSSRN*SLFLSH
Trigger: GTGTGACAAAAACAAGGACAAATTCCTGCTACTAAG...CTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAATTTTTGGGCAATTTCTACTaGAGGTCTGCTGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: ASYKNPRVSLQLVKIGQFLGNFY*RSAVGV
Trigger: CACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAA...AAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGGACGCCACCCTCAGGTaGATGTCACCTGTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWDATLR*MSPVGD
Trigger: GTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTC...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GTCCTAAATTCTTCCAGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATGACGCCACCCTCAGGTaGATGTCACCTGTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: VLNSSSQTELTACLSSRNDATLR*MSPVGD
Trigger: GTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTC...ATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp ATGGCTACTATGACCCTCATCCCCACTCTCCGAAGACTGATGGCCTaGCAAGCCCTTGGTGTCACACTGTATCATCAAATAAGACCTTAT +
Preference number: 5 (lower is better)
Translates to: MATMTLIPTLRRLMA*QALGVTLYHQIRPY
Trigger: ATAAGGTCTTATTTGATGATACAGTGTGACACCAAGGGCTTGTCAGGCCATCAGTCTTCGGAGAGTGGGGATGAGGGTCATAGTAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604401.2
CDS TCA 90 bp GGAATCCCTGAATGTGGTGGTAAGGTATGTCTCCACATTGCACTGTaGGTTTTAGTGGGGTTGCAGCACCAAACACAAAGATGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: GIPECGGKVCLHIAL*VLVGLQHQTQRCPR
Trigger: TCTGGGACATCTTTGTGTTTGGTGCTGCAACCCCACTAAAACTCACAGTGCAATGTGGAGACATACCTTACCACCACATTCAGGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680545.1
CDS-3UTR CAA 90 bp GTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTGATAAATTCCCAAAGTCATaGGATTCAGGACAACCATGC +
Preference number: 5 (lower is better)
Translates to: VFVTQRLVETGPGHGQFDKFPKS*DSGQPC
Trigger: GCATGGTTGTCCTGAATCCAATGACTTTGGGAATTT...ATCAAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ATGTCTTTCCAGAATAAAACTAAGCCCTACTCAGGAAAAATGGTGATGAAAGGCAGCCCTTGGAGCCCATaGGTCCTCTTGACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: MSFQNKTKPYSGKMVMKGSPWSP*VLLTLA
Trigger: TGCCAGGGTCAAGAGGACCAATGGGCTCCAAGGGCT...GCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp CTTGTTTTTGTCACACAAAGGTTGGTGGAGACGGGGCCAGGACATGGCCAGTTTCGACTAATAATCTTATaGAAAAGGGAGGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LVFVTQRLVETGPGHGQFRLIIL*KREELR
Trigger: CCTGAGCTCCTCCCTTTTCAATAAGATTATTAGTCG...AAACTGGCCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp ATCAAACAGAGAGTGACAGTCATTCAATGTCACTGGTTGGAGCTATaGAGGGTTTCTCTGATGGGTAGCAGAGTGAGATGGTCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: IKQRVTVIQCHWLEL*RVSLMGSRVRWSGV
Trigger: AACCCCAGACCATCTCACTCTGCTACCCATCAGAGAAACCCTTCATAGCTCCAACCAGTGACATTGAATGACTGTCACTCTCTGTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603469.1
CDS-3UTR CAA 90 bp AGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGAGCAGGCAGCATGCTTaGTGGCCACCACGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SQTELTACLSSRNLSLFLSRQHA*WPPRFF
Trigger: GAAGAAGCGTGGTGGCCACAAAGCATGCTGCCTGCT...CAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGCAGTGCCTGGCCTGTTaGGCATTAGGGGTGGGAGTT +
Preference number: 5 (lower is better)
Translates to: SQTELTACLSSRNLSLFLQCLAC*ALGVGV
Trigger: AACTCCCACCCCTAATGCCAAACAGGCCAGGCACTG...CAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS-3UTR CAA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGCAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AGTCAGACTGAGTTAACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGCAGGACATGGCCAGTTaGATGACAGTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SQTELTACLSSRNLSLFLQDMAS*MTVEKL
Trigger: CAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTG...CAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp TTAGTATATGCTCTGCCCATTTACCCTCCCCTGGTGCTGAAGAAGTaGGGACATGTCTTGAAAAGATATGATCAGAAAGTGTACTCCCTA +
Preference number: 5 (lower is better)
Translates to: LVYALPIYPPLVLKK*GHVLKRYDQKVYSL
Trigger: TAGGGAGTACACTTTCTGATCATATCTTTTCAAGACATGTCCTCACTTCTTCAGCACCAGGGGAGGGTAAATGGGCAGAGCATATACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS-3UTR CAA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGTCCCAGGTTCACCTTTaGGACCCATTTCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWSQVHL*DPFHLS
Trigger: AGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGA...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp ATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAAGGGAGGAAGCTCCTCCTGGTTGTaGACCACAAAAATCACAGGA +
Preference number: 5 (lower is better)
Translates to: MKGSSQTCTTNNLIEKGGSSSWL*TTKITG
Trigger: TCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCT...TCCTCCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CAA 90 bp ATAGCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAAAGCAGGAATTTGTCCTaGTTTTTGTCACACAAAGGT +
Preference number: 5 (lower is better)
Translates to: IASYKNPRVSLQLVKIGQSRNLS*FLSHKG
Trigger: ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCT...TTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp GCTTCGTACAAAAACCCAAGGGTGTCCCTCCAGCTGGTAAAAATTGGGCAATTTAGCAGGAATTTGTCCTaGTTTTTGTCACACAAAGGT +
Preference number: 5 (lower is better)
Translates to: ASYKNPRVSLQLVKIGQFSRNLS*FLSHKG
Trigger: ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCT...AAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS TCA 90 bp CTTCTCTTTGTGATTCTATATATTGTGAGATTATTCCATCAAGGTTaGTCTCCAGTAGAATGTCGCTCCACAAGGACAGGGCTAGTGCCT +
Preference number: 5 (lower is better)
Translates to: LLFVILYIVRLFHQG*SPVECRSTRTGLVP
Trigger: AGGCACTAGCCCTGTCCTTGTGGAGCGACATTCTACTGGAGATCAACCTTGATGGAATAATCTCACAATATATAGAATCACAAAGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS-3UTR CAA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGAAATTCCCAAAGTCATaGGATTCAGGACAACCATGC +
Preference number: 5 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWKFPKS*DSGQPC
Trigger: GCATGGTTGTCCTGAATCCAATGACTTTGGGAATTT...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAATCAAGCTCCTCCTGGTaGTTGACCACAAAAATCACA +
Preference number: 5 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIESSSSW*LTTKIT
Trigger: TGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGA...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
CDS-3UTR CAA 90 bp ACAGCATGTCTTAGTAGCAGGAATTTGTCCTTGTTTTTGTCACACAAAGGTTGGAATTTGTCCTTGTTTTaGTCACACAAAGGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: TACLSSRNLSLFLSHKGWNLSLF*SHKGWW
Trigger: CCACCAACCTTTGTGTGACAAAAACAAGGACAAATT...CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS-3UTR CAA 90 bp AAAATGGTGATGAAAGGCAGCTCACAGACATGCACGACTAATAATCTTATTGAAAGCAGGAATTTGTCCTaGTTTTTGTCACACAAAGGT +
Preference number: 5 (lower is better)
Translates to: KMVMKGSSQTCTTNNLIESRNLS*FLSHKG
Trigger: ACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCT...TTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000679838.1
ENST00000681097.1
CDS GCA 72 bp TTGGCCAGGCTTGGCAGCCCCCGGAAGAAGTCTGAATaGCTGGCAGTAGCAGGCTCCTGCTCAGAACAGCGC +
Preference number: 6 (lower is better)
Translates to: LARLGSPRKKSE*LAVAGSCSEQR
Trigger: GCGCTGTTCTGAGCAGGAGCCTGCTACTGCCAGGCATTCAGACTTCTTCCGGGGGCTGCCAAGCCTGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603469.1
CDS GCA 72 bp CAGGCTGAGATTCGTCACGCCTCTGAGTGCTCCCAGTaGCTGGCCTGTTTGGCATTAGGGGTGGGAGTTGGC +
Preference number: 6 (lower is better)
Translates to: QAEIRHASECSQ*LACLALGVGVG
Trigger: GCCAACTCCCACCCCTAATGCCAAACAGGCCAGGCACTGGGAGCACTCAGAGGCGTGACGAATCTCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS GCA 72 bp AGCCGGAGACAGGCTGAGATTCGTCACGCCTCTGAGTaGTCCCAGTGCCTGGCCTGTTTGGCATTAGGGGTG +
Preference number: 6 (lower is better)
Translates to: SRRQAEIRHASE*SQCLACLALGV
Trigger: CACCCCTAATGCCAAACAGGCCAGGCACTGGGAGCACTCAGAGGCGTGACGAATCTCAGCCTGTCTCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS GCA 72 bp CAGGGACTGCCCACAGGCTCTGGTCCCACAGCGATGTaGCATGGGACAAGAAGAAGGAGATCCTGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: QGLPTGSGPTAM*HGTRRRRSWLQ
Trigger: CTGGAGCCAGGATCTCCTTCTTCTTGTCCCATGGCACATCGCTGTGGGACCAGAGCCTGTGGGCAGTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS CAA 72 bp CGTCACGCCTCTGAGTGCTCCCAGTGCCTGGCCTGTTaGGCATTAGGGGTGGGAGTTGGCCAATCCCTGCTT +
Preference number: 6 (lower is better)
Translates to: RHASECSQCLAC*ALGVGVGQSLL
Trigger: AAGCAGGGATTGGCCAACTCCCACCCCTAATGCCAAACAGGCCAGGCACTGGGAGCACTCAGAGGCGTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS TCA 72 bp CCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTTaGTGTCACCTGTGGGAGACCGGGTCCACCTTGGAG +
Preference number: 6 (lower is better)
Translates to: PMCLSLKTPPSG*CHLWETGSTLE
Trigger: CTCCAAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603752.1
CDS GCA 72 bp CCAGGGGAGCCTAGCGAGCCTTGCATGCACGGGGACTaGGAGGTCTCCAGTTCCAGCATGAGATTCTTCATG +
Preference number: 6 (lower is better)
Translates to: PGEPSEPCMHGD*EVSSSSMRFFM
Trigger: CATGAAGAATCTCATGCTGGAACTGGAGACCTCGCAGTCCCCGTGCATGCAAGGCTCGCTAGGCTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS CAA 72 bp GCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTaGATGTCACCTGTGGGAGACCGGGTCCACCTTGGA +
Preference number: 6 (lower is better)
Translates to: AHVPVSKDATLR*MSPVGDRVHLG
Trigger: TCCAAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603752.1
CDS TCA 72 bp GAATTTGGCCAGGCTTGGCAGCCCCCGGAAGAAGTCTaGATGCCTGGCAGTAGCAGGCTCCTGCTCAGAACA +
Preference number: 6 (lower is better)
Translates to: EFGQAWQPPEEV*MPGSSRLLLRT
Trigger: TGTTCTGAGCAGGAGCCTGCTACTGCCAGGCATTCAGACTTCTTCCGGGGGCTGCCAAGCCTGGCCAAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603469.1
CDS TCA 72 bp CTGGTGAGCCCAGCCTTGTGTCCCTGGGGAGCCACATaGTCTTCAGCAAAGACCTCTGCTCTCACACGATGG +
Preference number: 6 (lower is better)
Translates to: LVSPALCPWGAT*SSAKTSALTRW
Trigger: CCATCGTGTGAGAGCAGAGGTCTTTGCTGAAGATCATGTGGCTCCCCAGGGACACAAGGCTGGGCTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS TCA 72 bp ATGGGGCCTGGGGCCCTGACAGTGACAGTCAGAGGCTaGATCAAAGCCAGCTACTGCCTGCCTCTGGATTTC +
Preference number: 6 (lower is better)
Translates to: MGPGALTVTVRG*IKASYCLPLDF
Trigger: GAAATCCAGAGGCAGGCAGTAGCTGGCTTTGATTCAGCCTCTGACTGTCACTGTCAGGGCCCCAGGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680240.1
ENST00000681222.1
CDS CCA 72 bp AAGCTTCACACTCCTCCAGGGACTGCCCACAGGCTCTaGTCCCACAGCGATGTGCCATGGGACAAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: KLHTPPGTAHRL*SHSDVPWDKKK
Trigger: CTTCTTCTTGTCCCATGGCACATCGCTGTGGGACCAGAGCCTGTGGGCAGTCCCTGGAGGAGTGTGAAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS CAA 90 bp AACAGGGCTGCCCATGTGCCTGTCTCTAAAGACGCCACCCTCAGGTaGATGTCACCTGTGGGAGACCGGGTCCACCTTGGAGATGTCTTT +
Preference number: 6 (lower is better)
Translates to: NRAAHVPVSKDATLR*MSPVGDRVHLGDVF
Trigger: AAAGACATCTCCAAGGTGGACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603752.1
CDS CCA 72 bp CCAGTGCCTGGCCTGTTTGGCATTAGGGGTGGGAGTTaGCCAATCCCTGCTTTGATGTTGCTTCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PVPGLFGIRGGS*PIPALMLLLLQ
Trigger: CTGGAGCAGAAGCAACATCAAAGCAGGGATTGGCCAACTCCCACCCCTAATGCCAAACAGGCCAGGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383781.8
CDS CCA 72 bp GCCAACATGCAGGAAAGACGAAAGGCTCATGGGGCCTaGGGCCCTGACAGTGACAGTCAGAGGCTGAATCAA +
Preference number: 6 (lower is better)
Translates to: ANMQERRKAHGA*GPDSDSQRLNQ
Trigger: TTGATTCAGCCTCTGACTGTCACTGTCAGGGCCCCAGGCCCCATGAGCCTTTCGTCTTTCCTGCATGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680240.1
ENST00000681222.1
CDS CCA 72 bp ACCTCTGCTCTCACACGATGGGAGGGTGTTGGAGTATaGATCCCAGCGTTGTTTTCACAGGGCAGGGACAGT +
Preference number: 6 (lower is better)
Translates to: TSALTRWEGVGV*IPALFSQGRDS
Trigger: ACTGTCCCTGCCCTGTGAAAACAACGCTGGGATCCATACTCCAACACCCTCCCATCGTGTGAGAGCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS CCA 72 bp GGTAAGGATCCCTTCTTCTGGGAAAATAGCGAGGGGTaGGTTTGGAGGCCAGCCAGTCATTGGTGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: GKDPFFWENSEG*VWRPASHWCQA
Trigger: TGCCTGACACCAATGACTGGCTGGCCTCCAAACCCACCCCTCGCTATTTTCCCAGAAGAAGGGATCCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CCA 72 bp TCCCAGAAAGCCTTACCACAGGAACTCGCGGGGAACTaGGCCCATACACAGATTCCCCGTAGGAAGGGTTAT +
Preference number: 6 (lower is better)
Translates to: SQKALPQELAGN*AHTQIPRRKGY
Trigger: ATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGGTAAGGCTTTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680240.1
ENST00000681222.1
CDS TCA 72 bp CTCCAGGTTGTTATCTGCAAAACTGGGACACTGACATaGCCTCCACCTCATAAAGCCAGTGTGGGGGTCCCG +
Preference number: 6 (lower is better)
Translates to: LQVVICKTGTLT*PPPHKASVGVP
Trigger: CGGGACCCCCACACTGGCTTTATGAGGTGGAGGTCATGTCAGTGTCCCAGTTTTGCAGATAACAACCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS GCA 72 bp CCTTCCTGCCTTGAAGACAGGCAAGATGTCTGGTGTTaGAGCAGCCGTGTTGCAACCAGGAAGTCACAAGCA +
Preference number: 6 (lower is better)
Translates to: PSCLEDRQDVWC*SSRVATRKSQA
Trigger: TGCTTGTGACTTCCTGGTTGCAACACGGCTGCTGCAACACCAGACATCTTGCCTGTCTTCAAGGCAGGAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680240.1
ENST00000681222.1
CDS CCA 72 bp CGAGGTCTCCAGTTCCAGCATGAGATTCTTCATGTCTaGGGAGAGAAGCGGACTTCGGCCACCTCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: RGLQFQHEILHV*GEKRTSATSEE
Trigger: TTCTTCAGAGGTGGCCGAAGTCCGCTTCTCTCCCCAGACATGAAGAATCTCATGCTGGAACTGGAGACCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383781.8
ENST00000383788.10
ENST00000603808.5
ENST00000681097.1
CDS CCA 72 bp AGCAAAGACCTCTGCTCTCACACGATGGGAGGGTGTTaGAGTATGGATCCCAGCGTTGTTTTCACAGGGCAG +
Preference number: 6 (lower is better)
Translates to: SKDLCSHTMGGC*SMDPSVVFTGQ
Trigger: CTGCCCTGTGAAAACAACGCTGGGATCCATACTCCAACACCCTCCCATCGTGTGAGAGCAGAGGTCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS CAA 72 bp CAGCAAAGACCTCTGCTCTCACACGATGGGAGGGTGTaGGAGTATGGATCCCAGCGTTGTTTTCACAGGGCA +
Preference number: 6 (lower is better)
Translates to: QQRPLLSHDGRV*EYGSQRCFHRA
Trigger: TGCCCTGTGAAAACAACGCTGGGATCCATACTCCAACACCCTCCCATCGTGTGAGAGCAGAGGTCTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS CAA 90 bp CATGATCTTCAGCAAAGACCTCTGCTCTCACACGATGGGAGGGTGTaGGAGTATGGATCCCAGCGTTGTTTTCACAGGGCAGGGACAGTC +
Preference number: 6 (lower is better)
Translates to: HDLQQRPLLSHDGRV*EYGSQRCFHRAGTV
Trigger: GACTGTCCCTGCCCTGTGAAAACAACGCTGGGATCCATACTCCAACACCCTCCCATCGTGTGAGAGCAGAGGTCTTTGCTGAAGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS TCA 72 bp CAGGACCCCAGGGAAAACACTGCAGTCGGAGGAGACTaGACTTTCCTGAGCGAGTTGACAGGTATTCGTACA +
Preference number: 6 (lower is better)
Translates to: QDPRENTAVGGD*TFLSELTGIRT
Trigger: TGTACGAATACCTGTCAACTCGCTCAGGAAAGTTCAGTCTCCTCCGACTGCAGTGTTTTCCCTGGGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CAA 72 bp ACACGATGGGAGGGTGTTGGAGTATGGATCCCAGCGTaGTTTTCACAGGGCAGGGACAGTCCATTAGTTCCT +
Preference number: 6 (lower is better)
Translates to: TRWEGVGVWIPA*FSQGRDSPLVP
Trigger: AGGAACTAATGGACTGTCCCTGCCCTGTGAAAACAACGCTGGGATCCATACTCCAACACCCTCCCATCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680897.1
CDS CAA 90 bp CCACAAAGACATCTTCCTGGAGGCCCGGGAAATCCTCTTTCCCCTTaGGGTCCCATTATAAGTTGTCCTAGGAAGCAACAGACTGCTGTG +
Preference number: 6 (lower is better)
Translates to: PQRHLPGGPGNPLSP*GPIISCPRKQQTAV
Trigger: CACAGCAGTCTGTTGCTTCCTAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680240.1
ENST00000681222.1
CDS GCA 72 bp AAGCTGGAGGAGGAAACAGAATCTCTATCCTTGGGCTaGTCAACAGTGGGAAGAGGGGTTTGCACACTACAC +
Preference number: 6 (lower is better)
Translates to: KLEEETESLSLG*STVGRGVCTLH
Trigger: GTGTAGTGTGCAAACCCCTCTTCCCACTGTTGAGCAGCCCAAGGATAGAGATTCTGTTTCCTCCTCCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CAA 72 bp TGGAAAAGCTCTGTGACCAAGAATATGAGGGTGGCATaGGAACAGCCTTCCAGAAGGCTCTGTGACCCCAAC +
Preference number: 6 (lower is better)
Translates to: WKSSVTKNMRVA*EQPSRRLCDPN
Trigger: GTTGGGGTCACAGAGCCTTCTGGAAGGCTGTTCCAATGCCACCCTCATATTCTTGGTCACAGAGCTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CAA 72 bp CATCTTCCTGGAGGCCCGGGAAATCCTCTTTCCCCTTaGGGTCCCATTATAAGTTGTCCTAGGAAGCAACAG +
Preference number: 6 (lower is better)
Translates to: HLPGGPGNPLSP*GPIISCPRKQQ
Trigger: CTGTTGCTTCCTAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680240.1
ENST00000681222.1
CDS CAA 72 bp GCGTTTTGGGTGTTCAGCCTCTCAAGCTCCTCCTGGTaGTTGACCACAAAAATCTGCCAGAGAACACACTGG +
Preference number: 6 (lower is better)
Translates to: AFWVFSLSSSSW*LTTKICQRTHW
Trigger: CCAGTGTGTTCTCTGGCAGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS TCA 72 bp ATGACCCTCATCCCCACTCTCCGAAGACTGATGGCCTaGCAAGCCCTTGGTGTCACACTGTATCATCAAATA +
Preference number: 6 (lower is better)
Translates to: MTLIPTLRRLMA*QALGVTLYHQI
Trigger: TATTTGATGATACAGTGTGACACCAAGGGCTTGTCAGGCCATCAGTCTTCGGAGAGTGGGGATGAGGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604401.2
CDS TCA 72 bp TGCAGCAGCCGTGTTGCAACCAGGAAGTCACAAGCATaGGAAGATAAGCCAACATGCAGGAAAGACGAAAGG +
Preference number: 6 (lower is better)
Translates to: CSSRVATRKSQA*EDKPTCRKDER
Trigger: CCTTTCGTCTTTCCTGCATGTTGGCTTATCTTCTCATGCTTGTGACTTCCTGGTTGCAACACGGCTGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680240.1
ENST00000681222.1
CDS TCA 72 bp TTTGGGTGTTCAGCCTCTCAAGCTCCTCCTGGTTGTTaGCCACAAAAATCTGCCAGAGAACACACTGGTGAG +
Preference number: 6 (lower is better)
Translates to: FGCSASQAPPGC*PQKSAREHTGE
Trigger: CTCACCAGTGTGTTCTCTGGCAGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CCA 72 bp AAATTCCCAAAGTCATTGGATTCAGGACAACCATGCTaGCCAGGGTCTGGCGAGGGTCAAGTTAGAAAGGAG +
Preference number: 6 (lower is better)
Translates to: KFPKSLDSGQPC*PGSGEGQVRKE
Trigger: CTCCTTTCTAACTTGACCCTCGCCAGACCCTGGCCAGCATGGTTGTCCTGAATCCAATGACTTTGGGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS CCA 72 bp ATGGCGTTTTGGGTGTTCAGCCTCTCAAGCTCCTCCTaGTTGTTGACCACAAAAATCTGCCAGAGAACACAC +
Preference number: 6 (lower is better)
Translates to: MAFWVFSLSSSS*LLTTKICQRTH
Trigger: GTGTGTTCTCTGGCAGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAACGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CAA 72 bp GATCAAAGGTTTCCATCTGCTCTGATGTCCAGAAGCTaGGTTCTTCCTGCCCAAGAGAACAGCAGGAATGGC +
Preference number: 6 (lower is better)
Translates to: DQRFPSALMSRS*VLPAQENSRNG
Trigger: GCCATTCCTGCTGTTCTCTTGGGCAGGAAGAACCAAGCTTCTGGACATCAGAGCAGATGGAAACCTTTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680545.1
CDS CAA 90 bp AAATTGAAGTGGAAAAGCTCTGTGACCAAGAATATGAGGGTGGCATaGGAACAGCCTTCCAGAAGGCTCTGTGACCCCAACAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: KLKWKSSVTKNMRVA*EQPSRRLCDPNNSS
Trigger: GGAGGAGTTGTTGGGGTCACAGAGCCTTCTGGAAGGCTGTTCCAATGCCACCCTCATATTCTTGGTCACAGAGCTTTTCCACTTCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS GCA 72 bp GATAAATTCCCAAAGTCATTGGATTCAGGACAACCATaGTGGCCAGGGTCTGGCGAGGGTCAAGTTAGAAAG +
Preference number: 6 (lower is better)
Translates to: DKFPKSLDSGQP*WPGSGEGQVRK
Trigger: CTTTCTAACTTGACCCTCGCCAGACCCTGGCCAGCATGGTTGTCCTGAATCCAATGACTTTGGGAATTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383786.9
ENST00000383788.10
ENST00000603808.5
ENST00000679838.1
ENST00000681097.1
CDS CCA 72 bp AGGAAACAGAATCTCTATCCTTGGGCTGCTCAACAGTaGGAAGAGGGGTTTGCACACTACACTCTAGCATTC +
Preference number: 6 (lower is better)
Translates to: RKQNLYPWAAQQ*EEGFAHYTLAF
Trigger: GAATGCTAGAGTGTAGTGTGCAAACCCCTCTTCCCACTGTTGAGCAGCCCAAGGATAGAGATTCTGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS TCA 72 bp AGAGTGACAGTCATTCAATGTCACTGGTTGGAGCTATaGAGGGTTTCTCTGATGGGTAGCAGAGTGAGATGG +
Preference number: 6 (lower is better)
Translates to: RVTVIQCHWLEL*RVSLMGSRVRW
Trigger: CCATCTCACTCTGCTACCCATCAGAGAAACCCTTCATAGCTCCAACCAGTGACATTGAATGACTGTCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603469.1
CDS TCA 72 bp GCTCTGCCCATTTACCCTCCCCTGGTGCTGAAGAAGTaGGGACATGTCTTGAAAAGATATGATCAGAAAGTG +
Preference number: 6 (lower is better)
Translates to: ALPIYPPLVLKK*GHVLKRYDQKV
Trigger: CACTTTCTGATCATATCTTTTCAAGACATGTCCTCACTTCTTCAGCACCAGGGGAGGGTAAATGGGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CCA 72 bp CCTGCGTTCCAATGGGTTCTTTCCAAGGATGTGCTATaGAATGAGATAGGATTACATTTGGGGAGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: PAFQWVLSKDVL*NEIGLHLGSSS
Trigger: GCTACTGCTCCCCAAATGTAATCCTATCTCATTCCATAGCACATCCTTGGAAAGAACCCATTGGAACGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604401.2
CDS TCA 72 bp GAATGTGGTGGTAAGGTATGTCTCCACATTGCACTGTaGGTTTTAGTGGGGTTGCAGCACCAAACACAAAGA +
Preference number: 6 (lower is better)
Translates to: ECGGKVCLHIAL*VLVGLQHQTQR
Trigger: TCTTTGTGTTTGGTGCTGCAACCCCACTAAAACTCACAGTGCAATGTGGAGACATACCTTACCACCACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680545.1
CDS CAA 90 bp GACAGGGAATCCACCAGGCTAGGAATATTCTGGGTAATTAAGCACTaGGGGAAATTGAAGTGGAAAAGCTCTGTGACCAAGAATATGAGG +
Preference number: 6 (lower is better)
Translates to: DRESTRLGIFWVIKH*GKLKWKSSVTKNMR
Trigger: CCTCATATTCTTGGTCACAGAGCTTTTCCACTTCAATTTCCCCAAGTGCTTAATTACCCAGAATATTCCTAGCCTGGTGGATTCCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CAA 90 bp AAAGTGTACTCCCTAGCAATGTGGAAGAACTGTGAGGGTAGTACCTaGGTTTTTAAAGGCTCTGATACCCAGGATACACCTCAGACCAAT +
Preference number: 6 (lower is better)
Translates to: KVYSLAMWKNCEGST*VFKGSDTQDTPQTN
Trigger: ATTGGTCTGAGGTGTATCCTGGGTATCAGAGCCTTTAAAAACCAAGGTACTACCCTCACAGTTCTTCCACATTGCTAGGGAGTACACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS TCA 72 bp CAGGCTCGCCATGAGTTGATCATTATTAAAGTTGGGTaGAGGGTACACAGGGGTTCATTACACTATTTGTTC +
Preference number: 6 (lower is better)
Translates to: QARHELIIIKVG*RVHRGSLHYLF
Trigger: GAACAAATAGTGTAATGAACCCCTGTGTACCCTTCACCCAACTTTAATAATGATCAACTCATGGCGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS TCA 72 bp GTGATTCTATATATTGTGAGATTATTCCATCAAGGTTaGTCTCCAGTAGAATGTCGCTCCACAAGGACAGGG +
Preference number: 6 (lower is better)
Translates to: VILYIVRLFHQG*SPVECRSTRTG
Trigger: CCCTGTCCTTGTGGAGCGACATTCTACTGGAGATCAACCTTGATGGAATAATCTCACAATATATAGAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CAA 72 bp TGTGATTCTATATATTGTGAGATTATTCCATCAAGGTaGATCTCCAGTAGAATGTCGCTCCACAAGGACAGG +
Preference number: 6 (lower is better)
Translates to: CDSIYCEIIPSR*ISSRMSLHKDR
Trigger: CCTGTCCTTGTGGAGCGACATTCTACTGGAGATCAACCTTGATGGAATAATCTCACAATATATAGAATCACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681222.1
CDS CAA 72 bp TTTTGGGTGTTCAGCCTCTCAAGCTCCTCCTGGTTGTaGACCACAAAAATAATCAAATGGACAATTTGGTTT +
Preference number: 6 (lower is better)
Translates to: FWVFSLSSSSWL*TTKIIKWTIWF
Trigger: AAACCAAATTGTCCATTTGATTATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680240.1
CDS CCA 72 bp AGACTTTTTGAATCCTCAGACTCTGTCATGTATACCTaGGATACAATTTCATGGTTTCCTATGCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: RLFESSDSVMYT*DTISWFPMPFF
Trigger: GAAGAAAGGCATAGGAAACCATGAAATTGTATCCCAGGTATACATGACAGAGTCTGAGGATTCAAAAAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681222.1