RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COLGALT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198756

Ensembl transcript IDs: ENST00000361927.9, ENST00000367520.3, ENST00000367521.5, ENST00000486375.2, ENST00000649786.1

Found 558 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCAGCGGCCTAGCTTGCTGGTCAGTGTAGAAGGGTACCCACAGTaGGTCGGGAAGGAAGGCCGAGGCTGGCGTCTGGTGGAAGGCAAG +
Preference number: 1 (lower is better)
Translates to: LQRPSLLVSVEGYPQ*VGKEGRGWRLVEGK
Trigger: CTTGCCTTCCACCAGACGCCAGCCTCGGCCTTCCTTCCCGACTCACTGTGGGTACCCTTCTACACTGACCAGCAAGCTAGGCCGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 90 bp GGCCTCCCCACAAGAGCCTGGCTGGGAAATTCAGGAGAATCAGATTaGCGAACCAATGTGTCCACACCCACCACTCCCCCGGGTGCCGTG +
Preference number: 1 (lower is better)
Translates to: GLPTRAWLGNSGESD*RTNVSTPTTPPGAV
Trigger: CACGGCACCCGGGGGAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGGCTCTTGTGGGGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 90 bp GCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTaGAAAGTGCAGGTGTTCAGTCCACACACAGCAGCACCAGCACTG +
Preference number: 1 (lower is better)
Translates to: AGLNEPQAGPMQRVL*KVQVFSPHTAAPAL
Trigger: CAGTGCTGGTGCTGCTGTGTGTGGACTGAACACCTGCACTTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 90 bp TCAACCAGTCCCCGGGCCCGATGTGAGTACAGGGGAGGTGGGAAATaGAGGAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTGCC +
Preference number: 1 (lower is better)
Translates to: STSPRARCEYRGGGK*RRNLEELMNTTTSA
Trigger: GGCAGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCGGGCCCGGGGACTGGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
3UTR TCA 90 bp GAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTaGCGCCCTCACATGACACTGCAAAGGTCAAATGTCAAAGGTCAA +
Preference number: 1 (lower is better)
Translates to: EAESGCQAQMQRPLY*RPHMTLQRSNVKGQ
Trigger: TTGACCTTTGACATTTGACCTTTGCAGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 90 bp ATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCCCCCGGGTaGCGTGGAAGTCTGCAACATCTGTTTCTCTGCCTTATCCTAAAG +
Preference number: 1 (lower is better)
Translates to: IRLPNQCVHTHHSPG*RGSLQHLFLCLILK
Trigger: CTTTAGGATAAGGCAGAGAAACAGATGTTGCAGACTTCCACGGCACCCGGGGGAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR TCA 90 bp GGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATaGCACTGCAAAGGTCAAATGTCAAAGGTCAAATGTCTTGGCTTA +
Preference number: 1 (lower is better)
Translates to: GARPRCKGLYTDALT*HCKGQMSKVKCLGL
Trigger: TAAGCCAAGACATTTGACCTTTGACATTTGACCTTTGCAGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 90 bp TATATCCACATGGCAAACTGGTCACCTCTATATGAGAACTCCAACTaGCATGATGGTCACAGGCCAAGTCTCAGTCGGACCCAAATACCC +
Preference number: 1 (lower is better)
Translates to: YIHMANWSPLYENSN*HDGHRPSLSRTQIP
Trigger: GGGTATTTGGGTCCGACTGAGACTTGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGCCATGTGGATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR GCA 90 bp AGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATaGACAGCCAGTCCTCACCCTTTATATATTACATTTATCTTTATA +
Preference number: 1 (lower is better)
Translates to: SVKLCSSAQTRDRAG*TASPHPLYITFIFI
Trigger: TATAAAGATAAATGTAATATATAAAGGGTGAGGACTGGCTGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGCGGGACAGGGCAGGATaGACAGCCAGTCCTCACCCT +
Preference number: 2 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVRDRAG*TASPHP
Trigger: AGGGTGAGGACTGGCTGTGCATCCTGCCCTGTCCCG...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCCCGCCTGTGGACTCTaGTCTGAAGGGCCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: RGRERVPGPDAKASILTPPACGL*SEGPSP
Trigger: TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCGAAGGGTACCCACAGTaGGTCGGGAAGGAAGGCCGA +
Preference number: 2 (lower is better)
Translates to: RGRERVPGPDAKASILTPEGYPQ*VGKEGR
Trigger: TCGGCCTTCCTTCCCGACTCACTGTGGGTACCCTTC...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAAAAGGAAGGCCGAGGCTaGCGTCTGGTGGAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKKEGRG*RLVEGK
Trigger: CTTGCCTTCCACCAGACGCCAGCCTCGGCCTTCCTT...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCTCCCCCGGGTGCCGTaGAAGTCTGCAACATCTGTT +
Preference number: 2 (lower is better)
Translates to: RGRERVPGPDAKASILTPLPRVP*KSATSV
Trigger: AACAGATGTTGCAGACTTCCACGGCACCCGGGGGAG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR CAA 90 bp AGGCCTCCCCACAAGAGCCTGGCTGGGAAATTCAGGAGAATCAGATaGCCGAACCAATGTGTCCACACCCACCACTCCCCCGGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: RPPHKSLAGKFRRIR*PNQCVHTHHSPGCR
Trigger: ACGGCACCCGGGGGAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGGCTCTTGTGGGGAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCGGTGCTGGTATGGGATaGCTGGGAGGGTTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: RGRERVPGPDAKASILTPGAGMG*LGGFFW
Trigger: CCAGAAAAACCCTCCCAGGCATCCCATACCAGCACC...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCGATGTTGAACTGATGTaGGCCACACTCCCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: RGRERVPGPDAKASILTPDVELM*ATLPGS
Trigger: GCTCCCTGGGAGTGTGGCCCACATCAGTTCAACATC...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGCACCACTCCCCCGGGTaGCGTGGAAGTCTGCAACAT +
Preference number: 2 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLHHSPG*RGSLQH
Trigger: ATGTTGCAGACTTCCACGGCACCCGGGGGAGTGGTG...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACTGGTATGGGATGCCTaGGAGGGTTTTTCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKLVWDA*EGFSGD
Trigger: GTCTCCAGAAAAACCCTCCCAGGCATCCCATACCAG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCCCCATATGGCTGCATaGTGCATGGACAGTGATGAG +
Preference number: 2 (lower is better)
Translates to: RGRERVPGPDAKASILTPPHMAA*CMDSDE
Trigger: CTCATCACTGTCCATGCACCATGCAGCCATATGGGG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTAGTGATGAGGAACGGTaGTGGTATGGGATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: RVPGPDAKASILTPSHDTSDEER*WYGMPG
Trigger: CCCAGGCATCCCATACCAGCACCGTTCCTCATCACT...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACACTCGCTCCCCAGATaGTCTTTCTGTTTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKHSLPR*SFCFSG
Trigger: CCCAGAAAAACAGAAAGAGCATCTGGGGAGCGAGTG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGCAGAGGATGTTGAACTaGTGTGGGCCACACTCCCAG +
Preference number: 2 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLQRMLN*CGPHSQ
Trigger: CTGGGAGTGTGGCCCACATCAGTTCAACATCCTCTG...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACATATGAGAACTCCAACTaGCATGATGGTCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTYENSN*HDGHRP
Trigger: TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATA...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCTGGCAAGGATAGTTaGTGGCCTGAAAATGTGCTC +
Preference number: 2 (lower is better)
Translates to: RGRERVPGPDAKASILTPSGKDS*WPENVL
Trigger: GAGCACATTTTCAGGCCAGCAACTATCCTTGCCAGA...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp CTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTACAGAACACGACCACCTCTaGCACAGAGGGGTAATGCCT +
Preference number: 2 (lower is better)
Translates to: LSLLFTAHQPVPGPDVSTEHDHL*HRGVMP
Trigger: AGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTC...TGTACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
3UTR-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACTCTTTCTGTTTTTCTaGGGGTGGGTGGGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKLFLFF*GWVGKE
Trigger: TTCCTTTCCCACCCACCCCCAGAAAAACAGAAAGAG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGGAACTCCAACTGCCATaGTGGTCACAGGCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLELQLP*WSQAKS
Trigger: AGACTTGGCCTGTGACCATCATGGCAGTTGGAGTTC...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAATCTAGTTGGCCTGGCTaGCTTGACTACATATTTGCT +
Preference number: 2 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKSSWPG*LDYIFA
Trigger: AGCAAATATGTAGTCAAGGCAGCCAGGCCAACTAGA...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCATATGAGAACTCCAACTaGCATGATGGTCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPYENSN*HDGHRP
Trigger: TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATA...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGGAAAGGGTGTCCGCCTaGGATTCTAAGAGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLERVSA*DSKSFP
Trigger: AGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTTC...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAAAGGTCAAGGAACCTCTaGATTGCTGAAGAGATGACT +
Preference number: 2 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKRSRNL*IAEEMT
Trigger: AGTCATCTCTTCAGCAATCCAGAGGTTCCTTGACCT...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGTGGAGCGGAGAGCGTaGAGCTCTGTAGCAGCGCGC +
Preference number: 2 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNVERRA*SSVAAR
Trigger: GCGCGCTGCTACAGAGCTTCACGCTCTCCGCTCCAC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAATACAGATTGAGGGCATaGGAACATAAACTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKYRLRA*EHKLEG
Trigger: TCCCTCAAGTTTATGTTCTCATGCCCTCAATCTGTA...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTACAGATTGAGGGCATaGGAACATAAACTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: RGRERVPGPDAKASILTPYRLRA*EHKLEG
Trigger: TCCCTCAAGTTTATGTTCTCATGCCCTCAATCTGTA...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTCATATGGCTGCATGGTaGATGGACAGTGATGAGGAA +
Preference number: 2 (lower is better)
Translates to: RVPGPDAKASILTPSHDTHMAAW*MDSDEE
Trigger: TTCCTCATCACTGTCCATGCACCATGCAGCCATATG...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGATGTTGAACTGATGTaGGCCACACTCCCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKDVELM*ATLPGS
Trigger: GCTCCCTGGGAGTGTGGCCCACATCAGTTCAACATC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR CCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGACCCGCCCCTCACCTaGGGAGATGAGGCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNDPPLT*GDEAAL
Trigger: CAAGGCAGCCTCATCTCCCCAGGTGAGGGGCGGGTC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp TCTCTAACAGCAGCTCACAGATCCAGGCAGCTTCCATCTTGCAACTTCGCCATCAGGGGAGGTGGGAAATaGAGGAGAAACCTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: SLTAAHRSRQLPSCNFAIRGGGK*RRNLEE
Trigger: CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCT...GATGGCGAAGTTGCAAGATGGAAGCTGCCTGGATCTGTGAGCTGCTGTTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
3UTR-3UTR CCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAGTCTTTCAGCCGTCTTaGGAAATTTGGGTTGAATTT +
Preference number: 2 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTVFQPS*EIWVEF
Trigger: AAATTCAACCCAAATTTCCCAAGACGGCTGAAAGAC...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCACAGAGGATGTTGAACTaGTGTGGGCCACACTCCCAG +
Preference number: 2 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPQRMLN*CGPHSQ
Trigger: CTGGGAGTGTGGCCCACATCAGTTCAACATCCTCTG...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR GCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACCACCACTCCCCCGGGTaGCGTGGAAGTCTGCAACAT +
Preference number: 2 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNHHSPG*RGSLQH
Trigger: ATGTTGCAGACTTCCACGGCACCCGGGGGAGTGGTG...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTAATACCCACCCCTACTaGATAACAGGGACTAAGATT +
Preference number: 2 (lower is better)
Translates to: RVPGPDAKASILTPSHDTNTHPY*ITGTKI
Trigger: AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATT...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGTCCCAGGCTAAGGGGTaGAGCGGAGAGCGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELSQAKG*SGEREA
Trigger: AGCTTCACGCTCTCCGCTCCACCCCTTAGCCTGGGA...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCTGGGAGGGTTTTTCTaGAGACAAAAATTTACAGAT +
Preference number: 2 (lower is better)
Translates to: RGRERVPGPDAKASILTPLGGFF*RQKFTD
Trigger: ATCTGTAAATTTTTGTCTCCAGAAAAACCCTCCCAG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGGAGGCTGGCGTCTGGTaGAAGGCAAGCTGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELEAGVW*KASCLL
Trigger: CAAGAGGCAGCTTGCCTTCCACCAGACGCCAGCCTC...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACAAGGAAGGCCGAGGCTaGCGTCTGGTGGAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNKEGRG*RLVEGK
Trigger: CTTGCCTTCCACCAGACGCCAGCCTCGGCCTTCCTT...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR CAA 90 bp AAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTaGGGTGAGTTCCCTTTCCTCCAGCGGCCTAGCTTGCTGGTCAGT +
Preference number: 2 (lower is better)
Translates to: KEVTLTAKSKRHNLE*GEFPFLQRPSLLVS
Trigger: ACTGACCAGCAAGCTAGGCCGCTGGAGGAAAGGGAACTCACCCAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTCAGAGGATGTTGAACTaGTGTGGGCCACACTCCCAG +
Preference number: 2 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIQRMLN*CGPHSQ
Trigger: CTGGGAGTGTGGCCCACATCAGTTCAACATCCTCTG...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR GCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACTCTGGCAAGGATAGTTaGTGGCCTGAAAATGTGCTC +
Preference number: 2 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDSGKDS*WPENVL
Trigger: GAGCACATTTTCAGGCCAGCAACTATCCTTGCCAGA...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGGAACGGTGCTGGTATaGGATGCCTGGGAGGGTTTT +
Preference number: 2 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNGTVLV*DAWEGF
Trigger: AAAACCCTCCCAGGCATCCCATACCAGCACCGTTCC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCAAAACCAGAGGATGTTaGACTGATGTGGGCCACACT +
Preference number: 2 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLKTRGC*TDVGHT
Trigger: AGTGTGGCCCACATCAGTTCAACATCCTCTGGTTTT...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGAACTCCAACTGCCATaGTGGTCACAGGCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNELQLP*WSQAKS
Trigger: AGACTTGGCCTGTGACCATCATGGCAGTTGGAGTTC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGAGCTTCCCTGGTTGCTaGCCTAAATCAGGTGACCAG +
Preference number: 2 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELSFPGC*PKSGDQ
Trigger: CTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCT...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGAAAGGGTGTCCGCCTaGGATTCTAAGAGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNERVSA*DSKSFP
Trigger: AGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTTC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGCTGGTATGGGATGCCTaGGAGGGTTTTTCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELLVWDA*EGFSGD
Trigger: GTCTCCAGAAAAACCCTCCCAGGCATCCCATACCAG...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGTGGCTGCATGGTGCATaGACAGTGATGAGGAACGGT +
Preference number: 2 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELWLHGA*TVMRNG
Trigger: ACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGCCCCATATGGCTGCATaGTGCATGGACAGTGATGAG +
Preference number: 2 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELPHMAA*CMDSDE
Trigger: CTCATCACTGTCCATGCACCATGCAGCCATATGGGG...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTAAAACCAGAGGATGTTaGACTGATGTGGGCCACACT +
Preference number: 2 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIKTRGC*TDVGHT
Trigger: AGTGTGGCCCACATCAGTTCAACATCCTCTGGTTTT...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR CCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACCACACTAGATCACTTTaGTTAGATGACTGTGACCAC +
Preference number: 2 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDHTRSL*LDDCDH
Trigger: GTGGTCACAGTCATCTAACCAAAGTGATCTAGTGTG...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGTCTTTCAGCCGTCTTaGGAAATTTGGGTTGAATTT +
Preference number: 2 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKVFQPS*EIWVEF
Trigger: AAATTCAACCCAAATTTCCCAAGACGGCTGAAAGAC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGTTGGGAAATTTGGGTTaGATTTCCTTATTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKLGNLG*ISLFPS
Trigger: GGAAGGAAATAAGGAAATTCAACCCAAATTTCCCAA...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR GCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTCTAGTTGGCCTGGCTaGCTTGACTACATATTTGCT +
Preference number: 2 (lower is better)
Translates to: KSQSDPNTHPYWITGTKISSWPG*LDYIFA
Trigger: AGCAAATATGTAGTCAAGGCAGCCAGGCCAACTAGA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAAATACCCACCCCTACTaGATAACAGGGACTAAGATT +
Preference number: 2 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPNTHPY*ITGTKI
Trigger: AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATT...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR TCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACTTGGGAAATTTGGGTTaGATTTCCTTATTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDLGNLG*ISLFPS
Trigger: GGAAGGAAATAAGGAAATTCAACCCAAATTTCCCAA...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR GCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGCAACATCTGTTTCTCTaGCTTATCCTAAAGACAATA +
Preference number: 2 (lower is better)
Translates to: KGCPPGILRASLVAGLNQQHLFL*LILKTI
Trigger: TATTGTCTTTAGGATAAGGCAGAGAAACAGATGTTG...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTCACACTAGATCACTTTaGTTAGATGACTGTGACCAC +
Preference number: 2 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIHTRSL*LDDCDH
Trigger: GTGGTCACAGTCATCTAACCAAAGTGATCTAGTGTG...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAGTCTTTCAGCCGTCTTaGGAAATTTGGGTTGAATTT +
Preference number: 2 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPVFQPS*EIWVEF
Trigger: AAATTCAACCCAAATTTCCCAAGACGGCTGAAAGAC...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGCACACTAGATCACTTTaGTTAGATGACTGTGACCAC +
Preference number: 2 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELHTRSL*LDDCDH
Trigger: GTGGTCACAGTCATCTAACCAAAGTGATCTAGTGTG...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 72 bp CGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAAGTaGAGGTGTTCAGTCCACACACAGCAGCACCAGCAC +
Preference number: 3 (lower is better)
Translates to: RKRGPCSVSSAK*RCSVHTQQHQH
Trigger: GTGCTGGTGCTGCTGTGTGTGGACTGAACACCTGCACTTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR TCA 72 bp CTTTCTTGTTCTCAGAGCTCCTGCAGCAGGCCTGAATaGACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: LSCSQSSCSRPE*TASGAHAACPL
Trigger: CAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGCAGGAGCTCTGAGAACAAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR TCA 72 bp CACTCTTTCTTGTTCTCAGAGCTCCTGCAGCAGGCCTaGATGAACCGCAAGCGGGGCCCATGCAGCGTGTCC +
Preference number: 3 (lower is better)
Translates to: HSFLFSELLQQA*MNRKRGPCSVS
Trigger: GGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGCAGGAGCTCTGAGAACAAGAAAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CAA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAGTTGGCCTGGCTGCCTaGACTACATATTTGCTGATG +
Preference number: 3 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTVGLAA*TTYLLM
Trigger: CATCAGCAAATATGTAGTCAAGGCAGCCAGGCCAAC...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CAA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACTTAGGGGATATCTTTaGAGAAAGGGTGTCCGCCTG +
Preference number: 3 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKLRGYL*RKGVRL
Trigger: CAGGCGGACACCCTTTCTCAAAAGATATCCCCTAAG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CAA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCGGCACAATTTAGAGTaGGGTGAGTTCCCTTTCCTC +
Preference number: 3 (lower is better)
Translates to: RGRERVPGPDAKASILTPRHNLE*GEFPFL
Trigger: GAGGAAAGGGAACTCACCCAACTCTAAATTGTGCCG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 72 bp CCGAACCAATGTGTCCACACCCACCACTCCCCCGGGTaGCGTGGAAGTCTGCAACATCTGTTTCTCTGCCTT +
Preference number: 3 (lower is better)
Translates to: PNQCVHTHHSPG*RGSLQHLFLCL
Trigger: AAGGCAGAGAAACAGATGTTGCAGACTTCCACGGCACCCGGGGGAGTGGTGGGTGTGGACACATTGGTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 72 bp AATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTaGAAAGTGCAGGTGTTCAGTCCACACACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: NEPQAGPMQRVL*KVQVFSPHTAA
Trigger: TGCTGCTGTGTGTGGACTGAACACCTGCACTTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CAA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTTCAGGAGAATCAGATaGCCGAACCAATGTGTCCAC +
Preference number: 3 (lower is better)
Translates to: RGRERVPGPDAKASILTPFRRIR*PNQCVH
Trigger: GTGGACACATTGGTTCGGCAATCTGATTCTCCTGAA...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR CCA 72 bp CCAATGTGTCCACACCCACCACTCCCCCGGGTGCCGTaGAAGTCTGCAACATCTGTTTCTCTGCCTTATCCT +
Preference number: 3 (lower is better)
Translates to: PMCPHPPLPRVP*KSATSVSLPYP
Trigger: AGGATAAGGCAGAGAAACAGATGTTGCAGACTTCCACGGCACCCGGGGGAGTGGTGGGTGTGGACACATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CAA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCATTCAGGAGAATCAGATaGCCGAACCAATGTGTCCAC +
Preference number: 3 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPFRRIR*PNQCVH
Trigger: GTGGACACATTGGTTCGGCAATCTGATTCTCCTGAA...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR TCA 72 bp TGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTaGAGGGCCCTCCCCATGAGTTTAAGTGTGAAGCTC +
Preference number: 3 (lower is better)
Translates to: CVCSTTRLWTLL*RALPMSLSVKL
Trigger: GAGCTTCACACTTAAACTCATGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR TCA 72 bp AGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTaGCGCCCTCACATGACACTGCAAAGGTCAAATGTC +
Preference number: 3 (lower is better)
Translates to: SGCQAQMQRPLY*RPHMTLQRSNV
Trigger: GACATTTGACCTTTGCAGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 72 bp ATGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTaGTGGTATGGGATGCCTGGGAGGGTTTTTCTGGAG +
Preference number: 3 (lower is better)
Translates to: MAAWCMDSDEER*WYGMPGRVFLE
Trigger: CTCCAGAAAAACCCTCCCAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 72 bp GAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTaGCACAGAGGGGTAATGCCTTCTCCTAGGGTGCAC +
Preference number: 3 (lower is better)
Translates to: EKPGGVDEHDHL*HRGVMPSPRVH
Trigger: GTGCACCCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
3UTR CCA 72 bp GCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTaGTATGGGATGCCTGGGAGGGTTTTTCTGGAGACA +
Preference number: 3 (lower is better)
Translates to: AAWCMDSDEERC*YGMPGRVFLET
Trigger: TGTCTCCAGAAAAACCCTCCCAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR-3UTR CAA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGGTTGGCCTGGCTGCCTaGACTACATATTTGCTGATG +
Preference number: 3 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLVGLAA*TTYLLM
Trigger: CATCAGCAAATATGTAGTCAAGGCAGCCAGGCCAAC...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR CCA 72 bp GTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTaGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGAC +
Preference number: 3 (lower is better)
Translates to: VSAWDSKSFPGC*PKSGDQPFVSD
Trigger: GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 72 bp ATGGCAAACTGGTCACCTCTATATGAGAACTCCAACTaGCATGATGGTCACAGGCCAAGTCTCAGTCGGACC +
Preference number: 3 (lower is better)
Translates to: MANWSPLYENSN*HDGHRPSLSRT
Trigger: GGTCCGACTGAGACTTGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAGTTGGCCTGGCTGCCTaGACTACATATTTGCTGATG +
Preference number: 3 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPVGLAA*TTYLLM
Trigger: CATCAGCAAATATGTAGTCAAGGCAGCCAGGCCAAC...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
3UTR GCA 72 bp CCCGGGTGCCGTGGAAGTCTGCAACATCTGTTTCTCTaGCTTATCCTAAAGACAATATCTTCGCCCATTTTG +
Preference number: 3 (lower is better)
Translates to: PGCRGSLQHLFL*LILKTISSPIL
Trigger: CAAAATGGGCGAAGATATTGTCTTTAGGATAAGGCAGAGAAACAGATGTTGCAGACTTCCACGGCACCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR GCA 72 bp GCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATaGCTGGGAGGGTTTTTCTGGAGACAAAAATTTACA +
Preference number: 3 (lower is better)
Translates to: AWTVMRNGAGMG*LGGFFWRQKFT
Trigger: TGTAAATTTTTGTCTCCAGAAAAACCCTCCCAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACCGCCCAGGCCCCAGTaGGGGTGCGCAGCGTACCTG +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKPPRPQ*GCAAYL
Trigger: CAGGTACGCTGCGCACCCGCACTGGGGCCTGGGCGG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCGTACCTGCAGCCGCTaGCGCTCCCCTGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPRTCSR*RSPAPR
Trigger: CCGAGGCGCAGGGGAGCGCCAGCGGCTGCAGGTACG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp CGGGCCCGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGCCGCCCAGGCCCCAGTaGGGGTGCGCAGCGTACCTG +
Preference number: 4 (lower is better)
Translates to: RARCEYRGGGKCRRNLEEPPRPQ*GCAAYL
Trigger: CAGGTACGCTGCGCACCCGCACTGGGGCCTGGGCGG...CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAAAGTGCGGCAGCGTGTaGGCCGCGTTGCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTKCGSV*AALRAR
Trigger: CCTCGCCCGCAACGCGGCGCACACGCTGCCGCACTT...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGAGCACCGTGGGGCTCTaGAGGGGCGACTCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVSTVGL*RGDSGK
Trigger: TTTCCCGGAGTCGCCCCTGCAGAGCCCCACGGTGCT...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp CACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTGCGTGTGCGCCGCGTTaGGGGCGAGGACCGCCACGA +
Preference number: 4 (lower is better)
Translates to: HLSLLFTAHQPVPGPDVSACAPR*GRGPPR
Trigger: TCGTGGCGGTCCTCGCCCGCAACGCGGCGCACACGC...ACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCAAGGCAGCCGAGGAAGTaGGGCAGCGTGTGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPRQPRK*GSVCAA
Trigger: CGCGGCGCACACGCTGCCGCACTTCCTCGGCTGCCT...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp GCGACACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTAGGCAGCCGAGGAAGTaGGGCAGCGTGTGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: ATPVTSVHSPSTSPRARCRQPRK*GSVCAA
Trigger: CGCGGCGCACACGCTGCCGCACTTCCTCGGCTGCCT...ACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAGTGGAGCGGAGAGCGTaGAGCTCTGTAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTVERRA*SSVAAR
Trigger: GCGCGCTGCTACAGAGCTTCACGCTCTCCGCTCCAC...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGGAGGCAGAGAGCGGGTaGCAGGCCCAGATGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVEAESG*QAQMQR
Trigger: CCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTC...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTGGCCGGCTCACACACTaGCCTCGGCGGCTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: RVPGPDAKASILTPSHDTGRLTH*PRRLRF
Trigger: GAACCGCAGCCGCCGAGGCCAGTGTGTGAGCCGGCC...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTCCGCCACGAGCACCGTaGGGCTCTGCAGGGGCGACT +
Preference number: 4 (lower is better)
Translates to: RVPGPDAKASILTPSHDTPPRAP*GSAGAT
Trigger: AGTCGCCCCTGCAGAGCCCCACGGTGCTCGTGGCGG...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR TCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACATGCAGCAGGCCTGAATaGACCGCAAGCGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTCSRPE*TASGAH
Trigger: ATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGCA...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTACAGGGGAGGTGGGCCTGTTCATACAGTGTaGGCAGCATCCGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: VHSPSTSPRARCEYRGGGPVHTV*AASGPA
Trigger: GGCGGGACCGGATGCTGCGCACACTGTATGAACAGG...CCCACCTCCCCTGTACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCGCAAGCGGGGCCCATaGAGCGTGTCCTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPRKRGP*SVSSAK
Trigger: CTTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GGAGTTGATGAACACGACCACCTCTGCCACAGAGGGGTAATGCCTTCTCCTAGGGGCCGGCTCACACACTaGCCTCGGCGGCTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: GVDEHDHLCHRGVMPSPRGRLTH*PRRLRF
Trigger: GAACCGCAGCCGCCGAGGCCAGTGTGTGAGCCGGCC...CCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACACAGTGGCTGCCCAGATaGCCATCCTGCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTQWLPR*PSCSWG
Trigger: ACCCCAAGAGCAGGATGGCCATCTGGGCAGCCACTG...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCAGGGAGGTTGGCGGTaGCAGGGCCTCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPQGGWR*QGLCVL
Trigger: AAGAACACAGAGGCCCTGCCACCGCCAACCTCCCTG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACACCTCTTGTCCTAAAGTaGGGACCCGCCCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTPLVLK*GPAPHL
Trigger: CAGGTGAGGGGCGGGTCCCCACTTTAGGACAAGAGG...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACATTCCGCTCGTACAGCTaGGGTCTGTGGCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTFRSYS*GLWPSL
Trigger: TAGGGAAGGCCACAGACCTCAGCTGTACGAGCGGAA...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR TCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCAGCACCAGCACTGCTaGTGTCACGGTTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPQHQHC*CHGCLS
Trigger: GGACAGACAACCGTGACATCAGCAGTGCTGGTGCTG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCAGCACGCAAGACAGATaGTGCAGGGGAACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPSTQDR*CRGTGV
Trigger: GACACCCGTTCCCCTGCATCATCTGTCTTGCGTGCT...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGAGGCCCCAGTGCGGGTaGGCAGCGTACCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQRPQCG*AAYLQP
Trigger: CGGCTGCAGGTACGCTGCGCACCCGCACTGGGGCCT...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp GTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACAAGTGCGGCAGCGTGTaGGCCGCGTTGCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VQGRWEMQEKPGGVDEHDKCGSV*AALRAR
Trigger: CCTCGCCCGCAACGCGGCGCACACGCTGCCGCACTT...GTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp CGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGCCGCCACGAGCACCGTaGGGCTCTGCAGGGGCGACT +
Preference number: 4 (lower is better)
Translates to: RCEYRGGGKCRRNLEELMPPRAP*GSAGAT
Trigger: AGTCGCCCCTGCAGAGCCCCACGGTGCTCGTGGCGG...CATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp CGACACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGGGGGCTTCAGGGGGATaGGCAGGTAGCCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: RHLSLLFTAHQPVPGPDVGASGG*AGSHSA
Trigger: AGCACTATGGCTACCTGCCCATCCCCCTGAAGCCCC...CACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTAGTGTCCAGGGAGGTTaGCGGTGGCAGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RVPGPDAKASILTPSHDTSVQGG*RWQGLC
Trigger: ACAGAGGCCCTGCCACCGCCAACCTCCCTGGACACT...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp CGACACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGTTCCGCTCGTACAGCTaGGGTCTGTGGCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: RHLSLLFTAHQPVPGPDVFRSYS*GLWPSL
Trigger: TAGGGAAGGCCACAGACCTCAGCTGTACGAGCGGAA...CACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTGAAGGGTACCCACAGTaGGTCGGGAAGGAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RVPGPDAKASILTPSHDTEGYPQ*VGKEGR
Trigger: TCGGCCTTCCTTCCCGACTCACTGTGGGTACCCTTC...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGTGCAGCAGGCCTGAATaGACCGCAAGCGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLCSRPE*TASGAH
Trigger: ATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGCA...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGGGCTTCGACCAGGTTTaGCACATTGGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVGFDQV*HIGHCF
Trigger: AAAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCC...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGCGGGACAGGGCAGGATaGACAGCCAGTCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLRDRAG*TASPHP
Trigger: AGGGTGAGGACTGGCTGTGCATCCTGCCCTGTCCCG...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCAGTGATGAGGAACGGTaGTGGTATGGGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPSDEER*WYGMPG
Trigger: CCCAGGCATCCCATACCAGCACCGTTCCTCATCACT...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGCGCAAGCGGGGCCCATaGAGCGTGTCCTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLRKRGP*SVSSAK
Trigger: CTTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCG...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACCACATTGTGATCAGTaGCTGCCCAGATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKPHCDQ*LPRWPS
Trigger: GGATGGCCATCTGGGCAGCCACTGATCACAATGTGG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCACTCCCCCGGGTGCCGTaGAAGTCTGCAACATCTGTT +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPLPRVP*KSATSV
Trigger: AACAGATGTTGCAGACTTCCACGGCACCCGGGGGAG...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGAGCTTCCCTGGTTGCTaGCCTAAATCAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVSFPGC*PKSGDQ
Trigger: CTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCT...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCAGATGAGGAACGGTGCTaGTATGGGATGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPDEERC*YGMPGR
Trigger: CCTCCCAGGCATCCCATACCAGCACCGTTCCTCATC...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCACAGAGGATGTTGAACTaGTGTGGGCCACACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPQRMLN*CGPHSQ
Trigger: CTGGGAGTGTGGCCCACATCAGTTCAACATCCTCTG...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAAGAACTCCAACTGCCATaGTGGTCACAGGCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKELQLP*WSQAKS
Trigger: AGACTTGGCCTGTGACCATCATGGCAGTTGGAGTTC...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGCTCCTGCAGCAGGCCTaGATGAACCGCAAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQLLQQA*MNRKRG
Trigger: GCCCCGCTTGCGGTTCATTCAGGCCTGCTGCAGGAG...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp CGGGCCCGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTGGAAGAGATGGCAGTaGGGACTTGAGAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: RARCEYRGGGKCRRNLEEWKRWQ*GLERRT
Trigger: CGTCCTCCTCTCAAGTCCTCACTGCCATCTCTTCCA...CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCGGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGCGTGTGCGCCGCGTTaGGGGCGAGGACCGCCACGA +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIACAPR*GRGPPR
Trigger: TCGTGGCGGTCCTCGCCCGCAACGCGGCGCACACGC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTGGCATTGCTGTAGATaGGGCTTTGCTTCCGGGACT +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPWHCCR*GFASGT
Trigger: AGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCA...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CGACACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGGGGAGGTGGGAAATaGAGGAGAAACCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RHLSLLFTAHQPVPGPDVRGGGK*RRNLEE
Trigger: CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCT...CACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp TTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTACAGGGGAGGTGGGAGAGAGGAGGACGGGATaGTTGTTGTACATGACTGGC +
Preference number: 4 (lower is better)
Translates to: FTAHQPVPGPDVSTGEVGERRTG*LLYMTG
Trigger: GCCAGTCATGTACAACAAGCATCCCGTCCTCCTCTC...TCCCACCTCCCCTGTACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACATTGCAGAGGTACATCTaGATGCCTGCTTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTLQRYI*MPACLL
Trigger: CAGCAGGCAAGCAGGCATCCAGATGTACCTCTGCAA...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGCCCTTGTTAGAGGCCTaGAGGAATAGGGATCTCGAT +
Preference number: 4 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVPLLEA*RNRDLD
Trigger: ATCGAGATCCCTATTCCTCCAGGCCTCTAACAAGGG...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACCAGGTTTGCCACATTaGGCACTGCTTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKPGLPH*ALLSLA
Trigger: AGCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGCAGGGAGGTTGGCGGTaGCAGGGCCTCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLQGGWR*QGLCVL
Trigger: AAGAACACAGAGGCCCTGCCACCGCCAACCTCCCTG...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCGAAAGGGTGTCCGCCTaGGATTCTAAGAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPERVSA*DSKSFP
Trigger: AGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTTC...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTGGCTGCATGGTGCATaGACAGTGATGAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPWLHGA*TVMRNG
Trigger: ACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGACCCGCCCCTCACCTaGGGAGATGAGGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKDPPLT*GDEAAL
Trigger: CAAGGCAGCCTCATCTCCCCAGGTGAGGGGCGGGTC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACACAACCCAGAAGCCACTaGCAGGGACAAAATGGACTG +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTQPRSH*QGQNGL
Trigger: CAGTCCATTTTGTCCCTGCCAGTGGCTTCTGGGTTG...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTTCAGTGCCTTCAGCTaGCTTGTGTTGAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPFSAFS*LVLSAL
Trigger: CAGGGCACTCAACACAAGCCAGCTGAAGGCACTGAA...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR TCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGCCGAGGCCTCCTTCCTaGGGTCAATTAGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLPRPPS*GQLGRW
Trigger: CCACCTTCCTAATTGACCTCAGGAAGGAGGCCTCGG...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR TCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCAAGTTCCCAGTCCAGCTaGGCCTGGTCAATGTTATCC +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPSSQSS*AWSMLS
Trigger: GGATAACATTGACCAGGCTCAGCTGGACTGGGAACT...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp CGACACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTTCCCAGTCCAGCTaGGCCTGGTCAATGTTATCC +
Preference number: 4 (lower is better)
Translates to: RHLSLLFTAHQPVPGPDVSSQSS*AWSMLS
Trigger: GGATAACATTGACCAGGCTCAGCTGGACTGGGAACT...CACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGAGCACGCAAGACAGATaGTGCAGGGGAACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLSTQDR*CRGTGV
Trigger: GACACCCGTTCCCCTGCATCATCTGTCTTGCGTGCT...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACGCCCAGGAAAAACTTaGGAAGTCCCTAGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKRPGKT*EVPSLS
Trigger: TGAGAGACTAGGGACTTCTCAAGTTTTTCCTGGGCG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR GCA 90 bp TTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTACAGGGGAGGTGGGACGGGAGGTTGGCCAGTaGTTTGGTCCAATTTCATCA +
Preference number: 4 (lower is better)
Translates to: FTAHQPVPGPDVSTGEVGREVGQ*FGPISS
Trigger: TGATGAAATTGGACCAAAGCACTGGCCAACCTCCCG...TCCCACCTCCCCTGTACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp CGGGCCCGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGGGCTTCGACCAGGTTTaGCACATTGGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: RARCEYRGGGKCRRNLEEGFDQV*HIGHCF
Trigger: AAAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCC...CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCGGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAATCCAACCAGCTTCTGTaGTCCTTCCAGAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKSNQLL*SFQRDD
Trigger: GTCATCTCTCTGGAAGGAGCACAGAAGCTGGTTGGA...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAGATGAGCAAGGGTTCTaGAGAGAAGGCTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTDEQGF*REGFQV
Trigger: GACCTGAAAGCCTTCTCTGCAGAACCCTTGCTCATC...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAAAGAGCTTCCCTGGTTaGTGGCCTAAATCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTKSFPG*WPKSGD
Trigger: GTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GTAAAGAGAACTCACAAACTGTTCCCAACTGCCTTAGACCAAAGCGACACCTGTCGTACCTGCAGCCGCTaGCGCTCCCCTGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VKRTHKLFPTALDQSDTCRTCSR*RSPAPR
Trigger: CCGAGGCGCAGGGGAGCGCCAGCGGCTGCAGGTACG...ACAGGTGTCGCTTTGGTCTAAGGCAGTTGGGAACAGTTTGTGAGTTCTCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGCGACCAGGCGAGGGTaGCAGCAGGGCGCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNATRRG*QQGAQP
Trigger: TGGCTGCGCGCCCTGCTGCCACCCTCGCCTGGTCGC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp GGAGTTGATGAACACGACCACCTCTGCCACAGAGGGGTAATGCCTTCTCCTAGGCAGTGGCTGCCCAGATaGCCATCCTGCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GVDEHDHLCHRGVMPSPRQWLPR*PSCSWG
Trigger: ACCCCAAGAGCAGGATGGCCATCTGGGCAGCCACTG...CCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCAGGTGTAGTCCTGGTGTaGGGGGTAGAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPGVVLV*GVESQL
Trigger: AAGCTGACTTTCTACCCCCCACACCAGGACTACACC...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCCCTTGTTAGAGGCCTaGAGGAATAGGGATCTCGAT +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPPLLEA*RNRDLD
Trigger: ATCGAGATCCCTATTCCTCCAGGCCTCTAACAAGGG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTGATGTTGAACTGATGTaGGCCACACTCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RVPGPDAKASILTPSHDTDVELM*ATLPGS
Trigger: GCTCCCTGGGAGTGTGGCCCACATCAGTTCAACATC...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCATGGCTGCATGGTGCATaGACAGTGATGAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPWLHGA*TVMRNG
Trigger: ACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCACCCCATATGGCTGCATaGTGCATGGACAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPPHMAA*CMDSDE
Trigger: CTCATCACTGTCCATGCACCATGCAGCCATATGGGG...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACGCCGAGGCTGGCGTCTaGTGGAAGGCAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDAEAGV*WKASCL
Trigger: GAGGCAGCTTGCCTTCCACCAGACGCCAGCCTCGGC...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp ACAGCAGCTCACAGATCCAGGCAGCTTCCATCTTGCAACTTCGCCATCTCGGTGTCTTCCTGCAGTGTCTaGTGGGGCTTCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: TAAHRSRQLPSCNFAISVSSCSV*WGFRGM
Trigger: CATCCCCCTGAAGCCCCATCAGACACTGCAGGAAGA...CACCGAGATGGCGAAGTTGCAAGATGGAAGCTGCCTGGATCTGTGAGCTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAAAAACCAGAGGATGTTaGACTGATGTGGGCCACACT +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTKTRGC*TDVGHT
Trigger: AGTGTGGCCCACATCAGTTCAACATCCTCTGGTTTT...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCAACTGACGCCCTCACATaGCACTGCAAAGGTCAAATG +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPTDALT*HCKGQM
Trigger: CATTTGACCTTTGCAGTGTCATGTGAGGGCGTCAGT...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCCTCCTGCAGCAGGCCTaGATGAACCGCAAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLLLQQA*MNRKRG
Trigger: GCCCCGCTTGCGGTTCATTCAGGCCTGCTGCAGGAG...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAAATCACTTCCCCACTCTaGAATAGCACGCAAGACAGA +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKITSPL*NSTQDR
Trigger: TCTGTCTTGCGTGCTATTTCAGAGTGGGGAAGTGAT...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCAGCTCCAAAATATCCCTaGGAATCTAGAAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPAPKYP*ESRRPQ
Trigger: CTGGGGCCTTCTAGATTCTCAGGGATATTTTGGAGC...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR GCA 90 bp GTAAAGAGAACTCACAAACTGTTCCCAACTGCCTTAGACCAAAGCGACACCTGTAGGCCCCAGTGCGGGTaGGCAGCGTACCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VKRTHKLFPTALDQSDTCRPQCG*AAYLQP
Trigger: CGGCTGCAGGTACGCTGCGCACCCGCACTGGGGCCT...ACAGGTGTCGCTTTGGTCTAAGGCAGTTGGGAACAGTTTGTGAGTTCTCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCCTGTTCATACAGTGTaGGCAGCATCCGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKPVHTV*AASGPA
Trigger: GGCGGGACCGGATGCTGCGCACACTGTATGAACAGG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR GCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACATCTGGCAAGGATAGTTaGTGGCCTGAAAATGTGCTC +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTSGKDS*WPENVL
Trigger: GAGCACATTTTCAGGCCAGCAACTATCCTTGCCAGA...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCATATGGCTGCATGGTaGATGGACAGTGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPHMAAW*MDSDEE
Trigger: TTCCTCATCACTGTCCATGCACCATGCAGCCATATG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCAGAGGCAGAGAGCGGGTaGCAGGCCCAGATGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPEAESG*QAQMQR
Trigger: CCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTC...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGGGGCTTCAGGGGGATaGGCAGGTAGCCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQGASGG*AGSHSA
Trigger: AGCACTATGGCTACCTGCCCATCCCCCTGAAGCCCC...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAAACAACTGAGACATACTaGGAGGGTTCCATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKTTETY*EGSIGG
Trigger: TCCTCCAATGGAACCCTCCCAGTATGTCTCAGTTGT...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAATTCAGTGCCTTCAGCTaGCTTGTGTTGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKFSAFS*LVLSAF
Trigger: AAAGGCACTCAACACAAGCCAGCTGAAGGCACTGAA...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCTTCCCAAAAGGATTaGCTCCAACCAGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPSSQKD*LQPASV
Trigger: CACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGA...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTACAGGGGAGGTGGGCTTGTTGTACATGACTaGCAGAAACTCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: VHSPSTSPRARCEYRGGGLVVHD*QKLIHW
Trigger: CCAGTGGATGAGTTTCTGCCAGTCATGTACAACAAG...CCCACCTCCCCTGTACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGTCCCAGGCTAAGGGGTaGAGCGGAGAGCGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKSQAKG*SGEREA
Trigger: AGCTTCACGCTCTCCGCTCCACCCCTTAGCCTGGGA...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGGGAACGGTGCTGGTATaGGATGCCTGGGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLGTVLV*DAWEGF
Trigger: AAAACCCTCCCAGGCATCCCATACCAGCACCGTTCC...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCGACCCGCCCCTCACCTaGGGAGATGAGGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLDPPLT*GDEAAL
Trigger: CAAGGCAGCCTCATCTCCCCAGGTGAGGGGCGGGTC...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAGCCGAGGCTGGCGTCTaGTGGAAGGCAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPAEAGV*WKASCL
Trigger: GAGGCAGCTTGCCTTCCACCAGACGCCAGCCTCGGC...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGAGGTCAAGGAACCTCTaGATTGCTGAAGAGATGACT +
Preference number: 4 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVRSRNL*IAEEMT
Trigger: AGTCATCTCTTCAGCAATCCAGAGGTTCCTTGACCT...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCGAACAGAATGTAGTCTaGCCATTTTTCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPEQNVV*PFFPRS
Trigger: ACTGCGAGGGAAAAATGGTCAGACTACATTCTGTTC...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR TCA 90 bp GAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGCCGAGGCCTCCTTCCTaGGGTCAATTAGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: EYRGGGKCRRNLEELMNTPRPPS*GQLGRW
Trigger: CCACCTTCCTAATTGACCTCAGGAAGGAGGCCTCGG...CGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAGTCACACTAGTATTATaGGGTCTGGGAAGACAAGAG +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTVTLVL*GLGRQE
Trigger: CTCTTGTCTTCCCAGACCTCATAATACTAGTGTGAC...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR TCA 90 bp GGAGTTGATGAACACGACCACCTCTGCCACAGAGGGGTAATGCCTTCTCCTAGGATGGCAGTGAGGACTTaGGAGGAGGACGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: GVDEHDHLCHRGVMPSPRMAVRT*EEDGML
Trigger: AAGCATCCCGTCCTCCTCTCAAGTCCTCACTGCCAT...CCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACATCTAGTTGGCCTGGCTaGCTTGACTACATATTTGCT +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTSSWPG*LDYIFA
Trigger: AGCAAATATGTAGTCAAGGCAGCCAGGCCAACTAGA...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCCGGGACAGGGCAGGATaGACAGCCAGTCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLRDRAG*TASPHP
Trigger: AGGGTGAGGACTGGCTGTGCATCCTGCCCTGTCCCG...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGGGTGCCGTGGAAGTCTaGAACATCTGTTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLGAVEV*NICFSA
Trigger: GGCAGAGAAACAGATGTTGCAGACTTCCACGGCACC...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACACCACTCCCCCGGGTaGCGTGGAAGTCTGCAACAT +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPHHSPG*RGSLQH
Trigger: ATGTTGCAGACTTCCACGGCACCCGGGGGAGTGGTG...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp ACAGCAGCTCACAGATCCAGGCAGCTTCCATCTTGCAACTTCGCCATCTCGGTGGAACACGACCACCTCTaGCACAGAGGGGTAATGCCT +
Preference number: 4 (lower is better)
Translates to: TAAHRSRQLPSCNFAISVEHDHL*HRGVMP
Trigger: AGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTC...CACCGAGATGGCGAAGTTGCAAGATGGAAGCTGCCTGGATCTGTGAGCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp GGAGTTGATGAACACGACCACCTCTGCCACAGAGGGGTAATGCCTTCTCCTAGGCCACATTGTGATCAGTaGCTGCCCAGATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GVDEHDHLCHRGVMPSPRPHCDQ*LPRWPS
Trigger: GGATGGCCATCTGGGCAGCCACTGATCACAATGTGG...CCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp CGGGCCCGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGATCAGGGTAAGACTCTaGTTCATCCATAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RARCEYRGGGKCRRNLEEIRVRL*FIHRPP
Trigger: TGGAGGCCTATGGATGAACCAGAGTCTTACCCTGAT...CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCGGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCAATCTGAACGTAGTCTaGGGTCCTCTTATAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPNLNVV*GPLIEA
Trigger: GGCTTCTATAAGAGGACCCCAGACTACGTTCAGATT...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp CACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTCCCTTGTTAGAGGCCTaGAGGAATAGGGATCTCGAT +
Preference number: 4 (lower is better)
Translates to: HLSLLFTAHQPVPGPDVSPLLEA*RNRDLD
Trigger: ATCGAGATCCCTATTCCTCCAGGCCTCTAACAAGGG...ACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGAGGCTTTCAGGTCCCTaGATTCATAATACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVRLSGP*IHNTPC
Trigger: ACAAGGAGTATTATGAATCCAGGGACCTGAAAGCCT...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGCATTGTCCCAGATGGTaGAGGTCTCCGTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLHCPRW*RSPCHS
Trigger: TGAGTGACACGGAGACCTCCACCATCTGGGACAATG...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACTCCCAGGCTAAGGGGTaGAGCGGAGAGCGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDSQAKG*SGEREA
Trigger: AGCTTCACGCTCTCCGCTCCACCCCTTAGCCTGGGA...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCAAAGGAAGGCCGAGGCTaGCGTCTGGTGGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPKEGRG*RLVEGK
Trigger: CTTGCCTTCCACCAGACGCCAGCCTCGGCCTTCCTT...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp CGGGCCCGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGATATTTAGGGACAACTaGGACATACTGGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: RARCEYRGGGKCRRNLEEIFRDN*DILGGF
Trigger: GAACCCTCCCAGTATGTCTCAGTTGTCCCTAAATAT...CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCGGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAAGCTTCTTCTTAAACTaGTGCTCAAAACGCACATCG +
Preference number: 4 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTSFFLN*CSKRTS
Trigger: CGATGTGCGTTTTGAGCATCAGTTTAAGAAGAAGCT...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGGTGGAGCGGAGAGCGTaGAGCTCTGTAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELVERRA*SSVAAR
Trigger: GCGCGCTGCTACAGAGCTTCACGCTCTCCGCTCCAC...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAAAGAGTTCATTTTCTGTaGACAGCACTATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKRVHFL*TALSAG
Trigger: ACCTGCAGATAGTGCTGTTCACAGAAAATGAACTCT...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR GCA 90 bp GGAGTTGATGAACACGACCACCTCTGCCACAGAGGGGTAATGCCTTCTCCTAGGGGATGCCTGCTTGCCTaGTGGAGAAGGCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: GVDEHDHLCHRGVMPSPRGCLLA*WRRQRQ
Trigger: TTGTCTTTGCCTTCTCCAGCAGGCAAGCAGGCATCC...CCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGCCCGCCTGTGGACTCTaGTCTGAAGGGCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELPACGL*SEGPSP
Trigger: TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGG...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCACTGGCTTGTGTTGAGTaGCCTGCATCACATAAAACA +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPLACVE*PASHKT
Trigger: TGTTTTATGTGATGCAGGGCACTCAACACAAGCCAG...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR GCA 90 bp GGAGTTGATGAACACGACCACCTCTGCCACAGAGGGGTAATGCCTTCTCCTAGGTGCCTTCTCCTAGGGTaGACGGGTTTGTTCACCGTT +
Preference number: 4 (lower is better)
Translates to: GVDEHDHLCHRGVMPSPRCLLLG*TGLFTV
Trigger: AACGGTGAACAAACCCGTGCACCCTAGGAGAAGGCA...CCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGGCAAACCGGGAGGTTaGCCAGTGCTTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQGKPGG*PVLWSN
Trigger: ATTGGACCAAAGCACTGGCCAACCTCCCGGTTTGCC...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCACTTGTTGTACATGACTaGCAGAAACTCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPLVVHD*QKLIHW
Trigger: CCAGTGGATGAGTTTCTGCCAGTCATGTACAACAAG...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGTCCTATCCCAGTCGGTaGCCACTGTCTCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQSYPSR*PLSHCP
Trigger: GGGACAATGAGACAGTGGCCACCGACTGGGATAGGA...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGGGCCTCTGTGTTCTTaGCATTGCTGTAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKGPLCS*HCCRCG
Trigger: GCCGCATCTACAGCAATGCCAAGAACACAGAGGCCC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTAGTGTCCAGGGAGGTTaGCGGTGGCAGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKISVQGG*RWQGLC
Trigger: ACAGAGGCCCTGCCACCGCCAACCTCCCTGGACACT...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGATGTTGAACTGATGTaGGCCACACTCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQDVELM*ATLPGS
Trigger: GCTCCCTGGGAGTGTGGCCCACATCAGTTCAACATC...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCCCTCTTGTCCTAAAGTaGGGACCCGCCCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLPLVLK*GPAPHL
Trigger: CAGGTGAGGGGCGGGTCCCCACTTTAGGACAAGAGG...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAGAGGCTGGCGTCTGGTaGAAGGCAAGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPEAGVW*KASCLL
Trigger: CAAGAGGCAGCTTGCCTTCCACCAGACGCCAGCCTC...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAAAGGAAGGCCGAGGCTaGCGTCTGGTGGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPKEGRG*RLVEGK
Trigger: CTTGCCTTCCACCAGACGCCAGCCTCGGCCTTCCTT...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CGGGCCCGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGGGGTTTGTTCACCGTTaGCAGTCATCAGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: RARCEYRGGGKCRRNLEEGFVHR*QSSESV
Trigger: AACACTTTCTGATGACTGCCAACGGTGAACAAACCC...CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCGGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGAGTTCCCAGTCCAGCTaGGCCTGGTCAATGTTATCC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKSSQSS*AWSMLS
Trigger: GGATAACATTGACCAGGCTCAGCTGGACTGGGAACT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR TCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACCAGAGGATGTTGAACTaGTGTGGGCCACACTCCCAG +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDQRMLN*CGPHSQ
Trigger: CTGGGAGTGTGGCCCACATCAGTTCAACATCCTCTG...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGGCTTCGACCAGGTTTaGCACATTGGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKGFDQV*HIGHCF
Trigger: AAAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGTGGCATTGCTGTAGATaGGGCTTTGCTTCCGGGACT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKWHCCR*GFASGT
Trigger: AGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCA...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTTCAGGAGAATCAGATTaGCGAACCAATGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RVPGPDAKASILTPSHDTSGESD*RTNVST
Trigger: TGTGGACACATTGGTTCGGCAATCTGATTCTCCTGA...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCAGGTGCCAGGCCCAGATaGAAAGGCCTCTATACTGAC +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPGARPR*KGLYTD
Trigger: GTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACC...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTGCCACAGAGGGCAAACCGGGAGGTTaGCCAGTGCTTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: KCRRNLEELMNTTTSATEGKPGG*PVLWSN
Trigger: ATTGGACCAAAGCACTGGCCAACCTCCCGGTTTGCC...CTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp AACAGCAGCTCACAGATCCAGGCAGCTTCCATCTTGCAACTTCGCCATCTCGGTCGTAGTTTCATCACATaGGCAAACCGGGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: NSSSQIQAASILQLRHLGRSFIT*ANREVG
Trigger: GCCAACCTCCCGGTTTGCCCATGTGATGAAACTACG...ACCGAGATGGCGAAGTTGCAAGATGGAAGCTGCCTGGATCTGTGAGCTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp CACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTAATCTGAACGTAGTCTaGGGTCCTCTTATAGAAGCC +
Preference number: 4 (lower is better)
Translates to: HLSLLFTAHQPVPGPDVSNLNVV*GPLIEA
Trigger: GGCTTCTATAAGAGGACCCCAGACTACGTTCAGATT...ACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp CGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGTTGCAGAGGTACATCTaGATGCCTGCTTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RCEYRGGGKCRRNLEELMLQRYI*MPACLL
Trigger: CAGCAGGCAAGCAGGCATCCAGATGTACCTCTGCAA...CATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGCTGGGAGGGTTCCATTaGAGGACGGTCAATCATTGC +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQLGGFH*RTVNHC
Trigger: GCAATGATTGACCGTCCTCCAATGGAACCCTCCCAG...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp GAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGCTGGGAGGGTTCCATTaGAGGACGGTCAATCATTGC +
Preference number: 4 (lower is better)
Translates to: EYRGGGKCRRNLEELMNTLGGFH*RTVNHC
Trigger: GCAATGATTGACCGTCCTCCAATGGAACCCTCCCAG...CGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCCAGGTTTGCCACATTaGGCACTGCTTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKPGLPH*ALLSLA
Trigger: AGCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTCTTGTTGTACATGACTaGCAGAAACTCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: RVPGPDAKASILTPSHDTLVVHD*QKLIHW
Trigger: CCAGTGGATGAGTTTCTGCCAGTCATGTACAACAAG...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGTCTCATTGTCCCAGATaGTGGAGGTCTCCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKSHCPR*WRSPCH
Trigger: GTGACACGGAGACCTCCACCATCTGGGACAATGAGA...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTCAGGGAGGTTGGCGGTaGCAGGGCCTCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIQGGWR*QGLCVL
Trigger: AAGAACACAGAGGCCCTGCCACCGCCAACCTCCCTG...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACAGTGTCCAGGGAGGTTaGCGGTGGCAGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNSVQGG*RWQGLC
Trigger: ACAGAGGCCCTGCCACCGCCAACCTCCCTGGACACT...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCTCCCCACAAGAGCCTaGCTGGGAAATTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKLPTRA*LGNSGE
Trigger: TTCTCCTGAATTTCCCAGCCAGGCTCTTGTGGGGAG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGAGCTTCCCTGGTTGCTaGCCTAAATCAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQSFPGC*PKSGDQ
Trigger: CTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCT...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGCTGGTATGGGATGCCTaGGAGGGTTTTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQLVWDA*EGFSGD
Trigger: GTCTCCAGAAAAACCCTCCCAGGCATCCCATACCAG...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAAAAAGGTCAAATGTCTTaGCTTAGGACTATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKKGQMS*LRTIRE
Trigger: CTCCCTTATAGTCCTAAGCCAAGACATTTGACCTTT...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
3UTR CAA 72 bp TCTAACAGCAGCTCACAGATCCAGGCAGCTTCCATCTaGCAACTTCGCCATCTCGGTGTTTCCCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: SNSSSQIQAASI*QLRHLGVSLPV
Trigger: GACTGGAAGGGAAACACCGAGATGGCGAAGTTGCAAGATGGAAGCTGCCTGGATCTGTGAGCTGCTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTCTTCCTGCAGTGTCTaGTGGGGCTTCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKISSCSV*WGFRGM
Trigger: CATCCCCCTGAAGCCCCATCAGACACTGCAGGAAGA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR TCA 90 bp GTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACAGACTGAGTAGTGGCTaGGAAAGCAGCCGATTTCAC +
Preference number: 4 (lower is better)
Translates to: VQGRWEMQEKPGGVDEHDRLSSG*ESSRFH
Trigger: GTGAAATCGGCTGCTTTCTCAGCCACTACTCAGTCT...GTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGCAATTTAGAGTTGGGTaGGTTCCCTTTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQQFRVG*VPFPPA
Trigger: CGCTGGAGGAAAGGGAACTCACCCAACTCTAAATTG...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGAAAGGAAGTCACACTaGCAGCTAAGTCTAAGCGGC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKERKSH*QLSLSG
Trigger: GCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCGGGAGGTTGGCCAGTaGTTTGGTCCAATTTCATCA +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKREVGQ*FGPISS
Trigger: TGATGAAATTGGACCAAAGCACTGGCCAACCTCCCG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCAGGCTTCGACCAGGTTTaGCACATTGGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPGFDQV*HIGHCF
Trigger: AAAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCC...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AACAGCAGCTCACAGATCCAGGCAGCTTCCATCTTGCAACTTCGCCATCTCGGTTCCAACCAGCTTCTGTaGTCCTTCCAGAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: NSSSQIQAASILQLRHLGSNQLL*SFQRDD
Trigger: GTCATCTCTCTGGAAGGAGCACAGAAGCTGGTTGGA...ACCGAGATGGCGAAGTTGCAAGATGGAAGCTGCCTGGATCTGTGAGCTGCTGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGTACTCGGCTACGGGATaGTTGTTGTACATGACTGGC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKYSATG*LLYMTG
Trigger: GCCAGTCATGTACAACAAGCATCCCGTAGCCGAGTA...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGATGAGCAAGGGTTCTaGAGAGAAGGCTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKDEQGF*REGFQV
Trigger: GACCTGAAAGCCTTCTCTGCAGAACCCTTGCTCATC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGCAACATCTGTTTCTCTaGCTTATCCTAAAGACAATA +
Preference number: 4 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVQHLFL*LILKTI
Trigger: TATTGTCTTTAGGATAAGGCAGAGAAACAGATGTTG...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGAAGAGCTTCCCTGGTTaGTGGCCTAAATCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKKSFPG*WPKSGD
Trigger: GTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCGGTGCTGGTATGGGATaGCTGGGAGGGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLGAGMG*LGGFFW
Trigger: CCAGAAAAACCCTCCCAGGCATCCCATACCAGCACC...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCGGTGCCAGGCCCAGATaGAAAGGCCTCTATACTGAC +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLGARPR*KGLYTD
Trigger: GTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACC...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGTGTCCTCTGCAAAGTaGAGGTGTTCAGTCCACACA +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKVSSAK*RCSVHT
Trigger: TGTGTGGACTGAACACCTGCACTTTGCAGAGGACAC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGTCCTCTGCAAAGTaGAGGTGTTCAGTCCACACA +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQVSSAK*RCSVHT
Trigger: TGTGTGGACTGAACACCTGCACTTTGCAGAGGACAC...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCATAGGGAGTTTGATTTaGTCCAAAATATCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RGRERVPGPDAKASILTPIGSLI*SKISLR
Trigger: TCTCAGGGATATTTTGGAGCAAATCAAACTCCCTAT...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR GCA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTACTCCCTTAAAGACCTaGCCCCAGAAAATAATCTCT +
Preference number: 4 (lower is better)
Translates to: RVPGPDAKASILTPSHDTTPLKT*PQKIIS
Trigger: AGAGATTATTTTCTGGGGGCAGGTCTTTAAGGGAGT...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACCGTAGTTTCATCACATaGGCAAACCGGGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDRSFIT*ANREVG
Trigger: GCCAACCTCCCGGTTTGCCCATGTGATGAAACTACG...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp GGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTGCCACAACTGAGACATACTaGGAGGGTTCCATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGKCRRNLEELMNTTTSATTETY*EGSIGG
Trigger: TCCTCCAATGGAACCCTCCCAGTATGTCTCAGTTGT...GGCAGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAGATGTTGAACTGATGTaGGCCACACTCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPDVELM*ATLPGS
Trigger: GCTCCCTGGGAGTGTGGCCCACATCAGTTCAACATC...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACCTCCCCACAAGAGCCTaGCTGGGAAATTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDLPTRA*LGNSGE
Trigger: TTCTCCTGAATTTCCCAGCCAGGCTCTTGTGGGGAG...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCAGAAAGGGTGTCCGCCTaGGATTCTAAGAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPERVSA*DSKSFP
Trigger: AGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTTC...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACTGGGAGGGTTTTTCTaGAGACAAAAATTTACAGAT +
Preference number: 4 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKLGGFF*RQKFTD
Trigger: ATCTGTAAATTTTTGTCTCCAGAAAAACCCTCCCAG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACTGGTATGGGATGCCTaGGAGGGTTTTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPLVWDA*EGFSGD
Trigger: GTCTCCAGAAAAACCCTCCCAGGCATCCCATACCAG...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCCCATATGGCTGCATaGTGCATGGACAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPPHMAA*CMDSDE
Trigger: CTCATCACTGTCCATGCACCATGCAGCCATATGGGG...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGAGGCTGGCGTCTGGTaGAAGGCAAGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNEAGVW*KASCLL
Trigger: CAAGAGGCAGCTTGCCTTCCACCAGACGCCAGCCTC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGTATTATCCACATTGTaGTCAGTGGCTGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKVLSTL*SVAAQM
Trigger: CATCTGGGCAGCCACTGATCACAATGTGGATAATAC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR TCA 90 bp GGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTGTATTATCCACATTGTaGTCAGTGGCTGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: GGGKCRRNLEELMNTTTSVLSTL*SVAAQM
Trigger: CATCTGGGCAGCCACTGATCACAATGTGGATAATAC...AGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGTCTTCCTGCAGTGTCTaGTGGGGCTTCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELSSCSV*WGFRGM
Trigger: CATCCCCCTGAAGCCCCATCAGACACTGCAGGAAGA...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCAATCTGCACATGGATaGGGTTCTCGATGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKQSAHG*GSRCLP
Trigger: AGGAAGACATCGAGAACCTCATCCATGTGCAGATTG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCAGCCTCGACAATCTTaGCCTCAATCTCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKQPRQS*PQSPVH
Trigger: ATGAACAGGAGATTGAGGTCAAGATTGTCGAGGCTG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR TCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCAAGACTGAGTAGTGGCTaGGAAAGCAGCCGATTTCAC +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPRLSSG*ESSRFH
Trigger: GTGAAATCGGCTGCTTTCTCAGCCACTACTCAGTCT...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCAGTTCCCAGTCCAGCTaGGCCTGGTCAATGTTATCC +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLSSQSS*AWSMLS
Trigger: GGATAACATTGACCAGGCTCAGCTGGACTGGGAACT...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGAAAACCAGAGGATGTTaGACTGATGTGGGCCACACT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKKTRGC*TDVGHT
Trigger: AGTGTGGCCCACATCAGTTCAACATCCTCTGGTTTT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR TCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAGAACTCCAACTGCCATaGTGGTCACAGGCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPELQLP*WSQAKS
Trigger: AGACTTGGCCTGTGACCATCATGGCAGTTGGAGTTC...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR TCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACGAAAGGAAGTCACACTaGCAGCTAAGTCTAAGCGGC +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDERKSH*QLSLSG
Trigger: GCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTC...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACACTGACGCCCTCACATaGCACTGCAAAGGTCAAATG +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDTDALT*HCKGQM
Trigger: CATTTGACCTTTGCAGTGTCATGTGAGGGCGTCAGT...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGCAGCACCAGCACTGCTaGTGTCACGGTTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELQHQHC*CHGCLS
Trigger: GGACAGACAACCGTGACATCAGCAGTGCTGGTGCTG...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGAAACATACTGCTGAGTaGCAAGCGAGGAGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKKHTAE*QARRRN
Trigger: GTTCCTTCTCCTCGCTTGTCACTCAGCAGTATGTTT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCAGAAAACATACTGCTaGGTGACAAGCGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKQKTYC*VTSEEK
Trigger: CTTCTCCTCGCTTGTCACTCAGCAGTATGTTTTCTG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCATAGTGCTCTCTGTTaGAGAGGTACATCTGGATGC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKHSALC*RGTSGC
Trigger: GCATCCAGATGTACCTCTGCAACAGAGAGCACTATG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR GCA 90 bp CACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTCATTTCAATATTCAGTaGCTTCAGCTGGCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: HLSLLFTAHQPVPGPDVSHFNIQ*LQLACV
Trigger: AACACAAGCCAGCTGAAGGCACTGAATATTGAAATG...ACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCATGGCATTGCTGTAGATaGGGCTTTGCTTCCGGGACT +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPWHCCR*GFASGT
Trigger: AGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCA...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCTGTGTTCTTGGCATTaGTGTAGATGCGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKLCSWH*CRCGFA
Trigger: AGCAAAGCCGCATCTACAGCAATGCCAAGAACACAG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGTATGAGAACTCCAACTaGCATGATGGTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKYENSN*HDGHRP
Trigger: TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATA...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACCACTCGCTCCCCAGATaGTCTTTCTGTTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDHSLPR*SFCFSG
Trigger: CCCAGAAAAACAGAAAGAGCATCTGGGGAGCGAGTG...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp TACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCGGTTGGCCAGTGCTTTaGTCCAATTTCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: YRGGGKCRRNLEELMNTTGWPVL*SNFIRV
Trigger: TACCCTGATGAAATTGGACCAAAGCACTGGCCAACC...GGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCACTGGGAGGGTTCCATTaGAGGACGGTCAATCATTGC +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPLGGFH*RTVNHC
Trigger: GCAATGATTGACCGTCCTCCAATGGAACCCTCCCAG...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGACAACTGAGACATACTaGGAGGGTTCCATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKTTETY*EGSIGG
Trigger: TCCTCCAATGGAACCCTCCCAGTATGTCTCAGTTGT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGTTCAGTGCCTTCAGCTaGCTTGTGTTGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKFSAFS*LVLSAF
Trigger: AAAGGCACTCAACACAAGCCAGCTGAAGGCACTGAA...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CCA 90 bp GGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTTTCAGTGCCTTCAGCTaGCTTGTGTTGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GGGKCRRNLEELMNTTTSFSAFS*LVLSAF
Trigger: AAAGGCACTCAACACAAGCCAGCTGAAGGCACTGAA...AGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp TACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCTCTTCCCAAAAGGATTaGCTCCAACCAGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: YRGGGKCRRNLEELMNTTSSQKD*LQPASV
Trigger: CACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGA...GGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCTCTCATTGTCCCAGATaGTGGAGGTCTCCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLSHCPR*WRSPCH
Trigger: GTGACACGGAGACCTCCACCATCTGGGACAATGAGA...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTCCTATCCCAGTCGGTaGCCACTGTCTCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKISYPSR*PLSHCP
Trigger: GGGACAATGAGACAGTGGCCACCGACTGGGATAGGA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCTCTTTCTGTTTTTCTaGGGGTGGGTGGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKLFLFF*GWVGKE
Trigger: TTCCTTTCCCACCCACCCCCAGAAAAACAGAAAGAG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCACACATAAAACACGTCTaGAGATTAACAAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPHIKHV*RLTSQR
Trigger: CCTTTGACTTGTTAATCTCCAGACGTGTTTTATGTG...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367521.5
3UTR CAA 72 bp ACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTaGGGTGAGTTCCCTTTCCTCCAGCGGCCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TLTAKSKRHNLE*GEFPFLQRPSL
Trigger: CAAGCTAGGCCGCTGGAGGAAAGGGAACTCACCCAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCTTCCATCTTGCAACTTCGCCATCTCGGTGTTTCCCTTCCAGTCACAGTGATGCAATCTGCACATGGATaGGGTTCTCGATGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASILQLRHLGVSLPVTVMQSAHG*GSRCLP
Trigger: AGGAAGACATCGAGAACCTCATCCATGTGCAGATTG...CATCACTGTGACTGGAAGGGAAACACCGAGATGGCGAAGTTGCAAGATGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp TACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCGATGCTTGTTGTACATaGCTGGCAGAAACTCATCCA +
Preference number: 4 (lower is better)
Translates to: YRGGGKCRRNLEELMNTTDACCT*LAETHP
Trigger: TGGATGAGTTTCTGCCAGTCATGTACAACAAGCATC...GGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTCCAGCCCTTTGTTTCTaGCCAGGTTTCTCACCTGAG +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIPALCF*PGFSPE
Trigger: CTCAGGTGAGAAACCTGGTCAGAAACAAAGGGCTGG...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCTTAGGGGATATCTTTTaGGAAAGGGTGTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLLGDIF*ERVSAW
Trigger: CCAGGCGGACACCCTTTCTCAAAAGATATCCCCTAA...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGTACATCTGGATGCCTaGGGATCCAAGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIVHLDA*GSKRGT
Trigger: TGTCCCTCTCTTGGATCCTCAGGCATCCAGATGTAC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS-3UTR GCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGGATGCCTGCTTGCCTaGTGGAGAAGGCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIGCLLA*WRRQRQ
Trigger: TTGTCTTTGCCTTCTCCAGCAGGCAAGCAGGCATCC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp GGAGTTGATGAACACGACCACCTCTGCCACAGAGGGGTAATGCCTTCTCCTAGGAGGACGGTCAATCATTaGTTCAATCTGCACATGGAT +
Preference number: 4 (lower is better)
Translates to: GVDEHDHLCHRGVMPSPRRTVNH*FNLHMD
Trigger: ATCCATGTGCAGATTGAAGCAATGATTGACCGTCCT...CCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCTACTCGGCTACGGGATaGTTGTTGTACATGACTGGC +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLYSATG*LLYMTG
Trigger: GCCAGTCATGTACAACAAGCATCCCGTAGCCGAGTA...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACTGTGTTCTTGGCATTaGTGTAGATGCGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPLCSWH*CRCGFA
Trigger: AGCAAAGCCGCATCTACAGCAATGCCAAGAACACAG...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGGTGCCGTGGAAGTCTaGAACATCTGTTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIGAVEV*NICFSA
Trigger: GGCAGAGAAACAGATGTTGCAGACTTCCACGGCACC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGGGTGCTGGTATGGGATaGCTGGGAGGGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELGAGMG*LGGFFW
Trigger: CCAGAAAAACCCTCCCAGGCATCCCATACCAGCACC...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACATATGGCTGCATGGTaGATGGACAGTGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPHMAAW*MDSDEE
Trigger: TTCCTCATCACTGTCCATGCACCATGCAGCCATATG...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAAGAGGTACATCTGGATaGCTGAGGATCCAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPRGTSG*LRIQER
Trigger: CCTCTCTTGGATCCTCAGGCATCCAGATGTACCTCT...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS-3UTR CCA 90 bp GCAACTTCGCCATCTCGGTGTTTCCCTTCCAGTCACAGTGATGATAAAGAGAGTGGTGTAGTCCTGGTGTaGGGGGTAGAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ATSPSRCFPSSHSDDKESGVVLV*GVESQL
Trigger: AAGCTGACTTTCTACCCCCCACACCAGGACTACACC...ACTCTCTTTATCATCACTGTGACTGGAAGGGAAACACCGAGATGGCGAAGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp GGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTGCTTCAATCTGCACATaGATGAGGTTCTCGATGTCT +
Preference number: 4 (lower is better)
Translates to: GGGKCRRNLEELMNTTTSASICT*MRFSMS
Trigger: AGACATCGAGAACCTCATCCATGTGCAGATTGAAGC...AGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCACCCTTGTTAGAGGCCTaGAGGAATAGGGATCTCGAT +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPPLLEA*RNRDLD
Trigger: ATCGAGATCCCTATTCCTCCAGGCCTCTAACAAGGG...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTCATTGTCCCAGATGGTaGAGGTCTCCGTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIHCPRW*RSPCHS
Trigger: TGAGTGACACGGAGACCTCCACCATCTGGGACAATG...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGGGCCTCTGTGTTCTTaGCATTGCTGTAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNGPLCS*HCCRCG
Trigger: GCCGCATCTACAGCAATGCCAAGAACACAGAGGCCC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTAGACTGAGTAGTGGCTaGGAAAGCAGCCGATTTCAC +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIRLSSG*ESSRFH
Trigger: GTGAAATCGGCTGCTTTCTCAGCCACTACTCAGTCT...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGAGCTTCTTCTTAAACTaGTGCTCAAAACGCACATCG +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKSFFLN*CSKRTS
Trigger: CGATGTGCGTTTTGAGCATCAGTTTAAGAAGAAGCT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR TCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCAGATGCTTGTTGTACATaGCTGGCAGAAACTCATCCA +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPDACCT*LAETHP
Trigger: TGGATGAGTTTCTGCCAGTCATGTACAACAAGCATC...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTTAGGGGATATCTTTTaGGAAAGGGTGTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKILGDIF*ERVSAW
Trigger: CCAGGCGGACACCCTTTCTCAAAAGATATCCCCTAA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGTACAGATTGAGGGCATaGGAACATAAACTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKYRLRA*EHKLEG
Trigger: TCCCTCAAGTTTATGTTCTCATGCCCTCAATCTGTA...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGCAAAGGCCTCTATACTaGCGCCCTCACATGACACTG +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELQRPLY*RPHMTL
Trigger: CAGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTG...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGAGCTTGTCTTGATTTaGCCTGACTCAGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQELVLI*PDSEFI
Trigger: AATGAACTCTGAGTCAGGTCAAATCAAGACAAGCTC...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR GCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGAGGACGGTCAATCATTaGTTCAATCTGCACATGGAT +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQRTVNH*FNLHMD
Trigger: ATCCATGTGCAGATTGAAGCAATGATTGACCGTCCT...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGCCTGTTCATACAGTGTaGGCAGCATCCGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWPVHTV*AASGPA
Trigger: GGCGGGACCGGATGCTGCGCACACTGTATGAACAGG...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR GCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTCCAACCAGCTTCTGTaGTCCTTCCAGAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKISNQLL*SFQRDD
Trigger: GTCATCTCTCTGGAAGGAGCACAGAAGCTGGTTGGA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGATGAGCAAGGGTTCTaGAGAGAAGGCTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIDEQGF*REGFQV
Trigger: GACCTGAAAGCCTTCTCTGCAGAACCCTTGCTCATC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACTCTAGTTGGCCTGGCTaGCTTGACTACATATTTGCT +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDSSWPG*LDYIFA
Trigger: AGCAAATATGTAGTCAAGGCAGCCAGGCCAACTAGA...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCATCTGGCAAGGATAGTTaGTGGCCTGAAAATGTGCTC +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPSGKDS*WPENVL
Trigger: GAGCACATTTTCAGGCCAGCAACTATCCTTGCCAGA...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCATCAGGAGAATCAGATTaGCGAACCAATGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPSGESD*RTNVST
Trigger: TGTGGACACATTGGTTCGGCAATCTGATTCTCCTGA...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGGGGGCTTCAGGGGGATaGGCAGGTAGCCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWGASGG*AGSHSA
Trigger: AGCACTATGGCTACCTGCCCATCCCCCTGAAGCCCC...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CCA 90 bp CATCTTGCAACTTCGCCATCTCGGTGTTTCCCTTCCAGTCACAGTGATGATAAACCAGGTTTGCCACATTaGGCACTGCTTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HLATSPSRCFPSSHSDDKPGLPH*ALLSLA
Trigger: AGCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGG...TTTATCATCACTGTGACTGGAAGGGAAACACCGAGATGGCGAAGTTGCAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCTCTTCCCAAAAGGATTaGCTCCAACCAGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLSSQKD*LQPASV
Trigger: CACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGA...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGAGGCTTTCAGGTCCCTaGATTCATAATACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KGCPPGILRASLVAGLNQRLSGP*IHNTPC
Trigger: ACAAGGAGTATTATGAATCCAGGGACCTGAAAGCCT...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCACACTAGATCACTTTaGTTAGATGACTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKHTRSL*LDDCDH
Trigger: GTGGTCACAGTCATCTAACCAAAGTGATCTAGTGTG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGAATACCCACCCCTACTaGATAACAGGGACTAAGATT +
Preference number: 4 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKNTHPY*ITGTKI
Trigger: AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCCTGGCAGGGACAAAATaGACTGAGACTCCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLLAGTK*TETPLK
Trigger: CTTTAAGGGAGTCTCAGTCCATTTTGTCCCTGCCAG...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCATTGCAGAGGTACATCTaGATGCCTGAGGATCCAAGA +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPLQRYI*MPEDPR
Trigger: TCTTGGATCCTCAGGCATCCAGATGTACCTCTGCAA...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTCAATCTGCACATGGATaGGGTTCTCGATGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIQSAHG*GSRCLP
Trigger: AGGAAGACATCGAGAACCTCATCCATGTGCAGATTG...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR TCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACAGCTTCTTCTTAAACTaGTGCTCAAAACGCACATCG +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDSFFLN*CSKRTS
Trigger: CGATGTGCGTTTTGAGCATCAGTTTAAGAAGAAGCT...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCGATGCTTGTTGTACATaGCTGGCAGAAACTCATCCA +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLDACCT*LAETHP
Trigger: TGGATGAGTTTCTGCCAGTCATGTACAACAAGCATC...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGCAATTTAGAGTTGGGTaGGTTCCCTTTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELQFRVG*VPFPPA
Trigger: CGCTGGAGGAAAGGGAACTCACCCAACTCTAAATTG...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTATCACTTCCCCACTCTaGAATAGCACGCAAGACAGA +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIITSPL*NSTQDR
Trigger: TCTGTCTTGCGTGCTATTTCAGAGTGGGGAAGTGAT...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACATCATTGCTTCAATCTaGACATGGATGAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDIIASI*TWMRFS
Trigger: CGAGAACCTCATCCATGTGCAGATTGAAGCAATGAT...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR GCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTATGAGAACTCCAACTaGCATGATGGTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIYENSN*HDGHRP
Trigger: TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACATGCAGCGTGTCCTCTaGAAAGTGCAGGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNMQRVL*KVQVFS
Trigger: ACTGAACACCTGCACTTTGCAGAGGACACGCTGCAT...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTCTTCCCAAAAGGATTaGCTCCAACCAGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKISSQKD*LQPASV
Trigger: CACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCACTTGTTGTACATGACTaGCAGAAACTCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPLVVHD*QKLIHW
Trigger: CCAGTGGATGAGTTTCTGCCAGTCATGTACAACAAG...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACACACTAGATCACTTTaGTTAGATGACTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPHTRSL*LDDCDH
Trigger: GTGGTCACAGTCATCTAACCAAAGTGATCTAGTGTG...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGCTCCCCCGGGTGCCGTaGAAGTCTGCAACATCTGTT +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWLPRVP*KSATSV
Trigger: AACAGATGTTGCAGACTTCCACGGCACCCGGGGGAG...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGGATGAGGAACGGTGCTaGTATGGGATGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWDEERC*YGMPGR
Trigger: CCTCCCAGGCATCCCATACCAGCACCGTTCCTCATC...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGCTGTTTTTCTGGGGGTaGGTGGGAAAGGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELLFFWG*VGKEVT
Trigger: TGTGACTTCCTTTCCCACCCACCCCCAGAAAAACAG...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTATATTTAGGGACAACTaGGACATACTGGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIIFRDN*DILGGF
Trigger: GAACCCTCCCAGTATGTCTCAGTTGTCCCTAAATAT...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR TCA 90 bp GTAAAGAGAACTCACAAACTGTTCCCAACTGCCTTAGACCAAAGCGACACCTGTCAGCCTCGACAATCTTaGCCTCAATCTCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: VKRTHKLFPTALDQSDTCQPRQS*PQSPVH
Trigger: ATGAACAGGAGATTGAGGTCAAGATTGTCGAGGCTG...ACAGGTGTCGCTTTGGTCTAAGGCAGTTGGGAACAGTTTGTGAGTTCTCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCATGTCTTGATTTGACCTaGCTCAGAGTTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPCLDLT*LRVHFL
Trigger: CAGAAAATGAACTCTGAGTCAGGTCAAATCAAGACA...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR TCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGGCCCTACAAAAGCCTTaGAAACCAGTAGCCTCACAA +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELALQKP*KPVASQ
Trigger: TTGTGAGGCTACTGGTTTTCAAGGCTTTTGTAGGGC...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR GCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACTATGAGAACTCCAACTaGCATGATGGTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNYENSN*HDGHRP
Trigger: TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATA...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGAGTGATGAGGAACGGTaGTGGTATGGGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWSDEER*WYGMPG
Trigger: CCCAGGCATCCCATACCAGCACCGTTCCTCATCACT...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGATCAGGGTAAGACTCTaGTTCATCCATAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELIRVRL*FIHRPP
Trigger: TGGAGGCCTATGGATGAACCAGAGTCTTACCCTGAT...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGGTTGGCCAGTGCTTTaGTCCAATTTCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNGWPVL*SNFIRV
Trigger: TACCCTGATGAAATTGGACCAAAGCACTGGCCAACC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGCTTCAATCTGCACATaGATGAGGTTCTCGATGTCT +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIASICT*MRFSMS
Trigger: AGACATCGAGAACCTCATCCATGTGCAGATTGAAGC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGGGGCCTCTGTGTTCTTaGCATTGCTGTAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWGPLCS*HCCRCG
Trigger: GCCGCATCTACAGCAATGCCAAGAACACAGAGGCCC...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCATTCTGGAGAGCAGAATaGAACACTGTAATCCACCTA +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPFWRAE*NTVIHL
Trigger: TAGGTGGATTACAGTGTTCCATTCTGCTCTCCAGAA...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS-3UTR TCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGCAAAGGCCTCTATACTaGCGCCCTCACATGACACTG +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWQRPLY*RPHMTL
Trigger: CAGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTG...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGCGAGGAGAAGGAACCTaGACTGTGTCTGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWRGEGT*TVSDAE
Trigger: CTCAGCATCAGACACAGTTCAGGTTCCTTCTCCTCG...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS-3UTR GCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTATCATTGCTTCAATCTaGACATGGATGAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIIIASI*TWMRFS
Trigger: CGAGAACCTCATCCATGTGCAGATTGAAGCAATGAT...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR GCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTAGGACGGTCAATCATTaGTTCAATCTGCACATGGAT +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIRTVNH*FNLHMD
Trigger: ATCCATGTGCAGATTGAAGCAATGATTGACCGTCCT...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR GCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCACATTTCAATATTCAGTaGCTTCAGCTGGCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPHFNIQ*LQLACV
Trigger: AACACAAGCCAGCTGAAGGCACTGAATATTGAAATG...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTAGGCTTTCAGGTCCCTaGATTCATAATACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIRLSGP*IHNTPC
Trigger: ACAAGGAGTATTATGAATCCAGGGACCTGAAAGCCT...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGTCTCATTGTCCCAGATaGTGGAGGTCTCCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWSHCPR*WRSPCH
Trigger: GTGACACGGAGACCTCCACCATCTGGGACAATGAGA...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTAATACCCACCCCTACTaGATAACAGGGACTAAGATT +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKINTHPY*ITGTKI
Trigger: AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATT...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAAAAGGTCAAATGTCTTaGCTTAGGACTATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPKGQMS*LRTIRE
Trigger: CTCCCTTATAGTCCTAAGCCAAGACATTTGACCTTT...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GTAAAGAGAACTCACAAACTGTTCCCAACTGCCTTAGACCAAAGCGACACCTGTAGCTTCTTCTTAAACTaGTGCTCAAAACGCACATCG +
Preference number: 4 (lower is better)
Translates to: VKRTHKLFPTALDQSDTCSFFLN*CSKRTS
Trigger: CGATGTGCGTTTTGAGCATCAGTTTAAGAAGAAGCT...ACAGGTGTCGCTTTGGTCTAAGGCAGTTGGGAACAGTTTGTGAGTTCTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR TCA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCTTGGGAAATTTGGGTTaGATTTCCTTATTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLLGNLG*ISLFPS
Trigger: GGAAGGAAATAAGGAAATTCAACCCAAATTTCCCAA...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGTACAGATTGAGGGCATaGGAACATAAACTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELYRLRA*EHKLEG
Trigger: TCCCTCAAGTTTATGTTCTCATGCCCTCAATCTGTA...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AAAGAGAGTAAAGAGAACTCACAAACTGTTCCCAACTGCCTTAGACCAAAGCGACATAGTGCTCTCTGTTaGAGAGGTACATCTGGATGC +
Preference number: 4 (lower is better)
Translates to: KESKENSQTVPNCLRPKRHSALC*RGTSGC
Trigger: GCATCCAGATGTACCTCTGCAACAGAGAGCACTATG...TCGCTTTGGTCTAAGGCAGTTGGGAACAGTTTGTGAGTTCTCTTTACTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp GTAAAGAGAACTCACAAACTGTTCCCAACTGCCTTAGACCAAAGCGACACCTGTATCATTGCTTCAATCTaGACATGGATGAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: VKRTHKLFPTALDQSDTCIIASI*TWMRFS
Trigger: CGAGAACCTCATCCATGTGCAGATTGAAGCAATGAT...ACAGGTGTCGCTTTGGTCTAAGGCAGTTGGGAACAGTTTGTGAGTTCTCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR GCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGCACTCGCTCCCCAGATaGTCTTTCTGTTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWHSLPR*SFCFSG
Trigger: CCCAGAAAAACAGAAAGAGCATCTGGGGAGCGAGTG...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGATGCAGCGTGTCCTCTaGAAAGTGCAGGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWMQRVL*KVQVFS
Trigger: ACTGAACACCTGCACTTTGCAGAGGACACGCTGCAT...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCACTGGGAGGGTTTTTCTaGAGACAAAAATTTACAGAT +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPLGGFF*RQKFTD
Trigger: ATCTGTAAATTTTTGTCTCCAGAAAAACCCTCCCAG...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR TCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGAAAACCAGAGGATGTTaGACTGATGTGGGCCACACT +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWKTRGC*TDVGHT
Trigger: AGTGTGGCCCACATCAGTTCAACATCCTCTGGTTTT...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR TCA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTTGGGAAATTTGGGTTaGATTTCCTTATTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KSQSDPNTHPYWITGTKILGNLG*ISLFPS
Trigger: GGAAGGAAATAAGGAAATTCAACCCAAATTTCCCAA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR GCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGCATTTCAATATTCAGTaGCTTCAGCTGGCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELHFNIQ*LQLACV
Trigger: AACACAAGCCAGCTGAAGGCACTGAATATTGAAATG...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR GCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGCTGTGTTCTTGGCATTaGTGTAGATGCGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWLCSWH*CRCGFA
Trigger: AGCAAAGCCGCATCTACAGCAATGCCAAGAACACAG...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGGTCTTTCAGCCGTCTTaGGAAATTTGGGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELVFQPS*EIWVEF
Trigger: AAATTCAACCCAAATTTCCCAAGACGGCTGAAAGAC...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGCTCTTTCTGTTTTTCTaGGGGTGGGTGGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWLFLFF*GWVGKE
Trigger: TTCCTTTCCCACCCACCCCCAGAAAAACAGAAAGAG...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAAGTAAAACACAGCATTaGGGACTAATAAAAACACTC +
Preference number: 4 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPSKTQH*GLIKTL
Trigger: GAGTGTTTTTATTAGTCCCCAATGCTGTGTTTTACT...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS-3UTR TCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGGATGCTTGTTGTACATaGCTGGCAGAAACTCATCCA +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWDACCT*LAETHP
Trigger: TGGATGAGTTTCTGCCAGTCATGTACAACAAGCATC...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR TCA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGTTGGGAAATTTGGGTTaGATTTCCTTATTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELLGNLG*ISLFPS
Trigger: GGAAGGAAATAAGGAAATTCAACCCAAATTTCCCAA...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGGCTTCAATCTGCACATaGATGAGGTTCTCGATGTCT +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWASICT*MRFSMS
Trigger: AGACATCGAGAACCTCATCCATGTGCAGATTGAAGC...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR TCA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGTGTCTAGTAGCTCCTTaGAAAGCTACATTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWCLVAP*KATFSE
Trigger: CTCTGAGAATGTAGCTTTTCAAGGAGCTACTAGACA...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS CCA 90 bp CGCGGAGCAGGGCTGAGGAGAGGAGCAGTAGCGACCAGGCGAGGGTaGCAGCAGGGCGCGCAGCCATGTTCCGGGCCGAGGCGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: RGAGLRRGAVATRRG*QQGAQPCSGPRRAA
Trigger: CGCCGCCCGCCTCGGCCCGGAACATGGCTGCGCGCCCTGCTGCCACCCTCGCCTGGTCGCTACTGCTCCTCTCCTCAGCCCTGCTCCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS-3UTR CAA 90 bp CACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTAGCGTGTGCGCCGCGTaGCGGGCGAGGACCGCCACG +
Preference number: 5 (lower is better)
Translates to: HLSLLFTAHQPVPGPDVSSVCAA*RARTAT
Trigger: CGTGGCGGTCCTCGCCCGCAACGCGGCGCACACGCT...ACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp CAGAACTCACACCTGCGGTGGGTTCCCAGGCTAAGGGGTGGAGCGGAGAGCGTGGTGGCCACTGTCTCATaGTCCCAGATGGTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: QNSHLRWVPRLRGGAESVVATVS*SQMVEV
Trigger: GACCTCCACCATCTGGGACAATGAGACAGTGGCCAC...CACGCTCTCCGCTCCACCCCTTAGCCTGGGAACCCACCGCAGGTGTGAGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCAGCGTGTGCGCCGCGTaGCGGGCGAGGACCGCCACG +
Preference number: 5 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLSVCAA*RARTAT
Trigger: CGTGGCGGTCCTCGCCCGCAACGCGGCGCACACGCT...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp GTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTACAGGGGAGGTGGGACCAGGTTTGCCACATaGGGCACTGCTTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: VHSPSTSPRARCEYRGGGTRFAT*GTAFSG
Trigger: GCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGGT...CCCACCTCCCCTGTACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS GCA 90 bp TGTCCAGGGAGGTTGGCGGTGGCAGGGCCTCTGTGTTCTTGGCATTaGTGTAGATGCGGCTTTGCTTCCGGGACTTCCAGGCATGTGTCC +
Preference number: 5 (lower is better)
Translates to: CPGRLAVAGPLCSWH*CRCGFASGTSRHVS
Trigger: GGACACATGCCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCAAGAACACAGAGGCCCTGCCACCGCCAACCTCCCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS CCA 90 bp CATGTGTCCTATCCCAGTCGGTGGCCACTGTCTCATTGTCCCAGATaGTGGAGGTCTCCGTGTCACTCAGGTACCCCGGCTGGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: HVSYPSRWPLSHCPR*WRSPCHSGTPAGLC
Trigger: ACACAGGCCAGCCGGGGTACCTGAGTGACACGGAGACCTCCACCATCTGGGACAATGAGACAGTGGCCACCGACTGGGATAGGACACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACATCTGGATGCCTGCTaGCCTGCTGGAGAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKHLDAC*PAGEGK
Trigger: TTTGCCTTCTCCAGCAGGCAAGCAGGCATCCAGATG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp TTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTACAGGGGAGGTGGGACATCTGGATGCCTGCTaGCCTGCTGGAGAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: FTAHQPVPGPDVSTGEVGHLDAC*PAGEGK
Trigger: TTTGCCTTCTCCAGCAGGCAAGCAGGCATCCAGATG...TCCCACCTCCCCTGTACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCAGTGGCCACTGTCTCATaGTCCCAGATGGTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPVATVS*SQMVEV
Trigger: GACCTCCACCATCTGGGACAATGAGACAGTGGCCAC...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS CCA 90 bp GGCTTTGCTTCCGGGACTTCCAGGCATGTGTCCTATCCCAGTCGGTaGCCACTGTCTCATTGTCCCAGATGGTGGAGGTCTCCGTGTCAC +
Preference number: 5 (lower is better)
Translates to: GFASGTSRHVSYPSR*PLSHCPRWWRSPCH
Trigger: GTGACACGGAGACCTCCACCATCTGGGACAATGAGACAGTGGCCACCGACTGGGATAGGACACATGCCTGGAAGTCCCGGAAGCAAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCACTGGGAGGGTTCCATaGGAGGACGGTCAATCATTG +
Preference number: 5 (lower is better)
Translates to: RGRERVPGPDAKASILTPTGRVP*EDGQSL
Trigger: CAATGATTGACCGTCCTCCAATGGAACCCTCCCAGT...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACAAGCCGATTTCACCCCTaGTTAGAGGCCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTSRFHP*LEAWRN
Trigger: ATTCCTCCAGGCCTCTAACAAGGGGTGAAATCGGCT...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCAGCCGATTTCACCCCTaGTTAGAGGCCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RGRERVPGPDAKASILTPSRFHP*LEAWRN
Trigger: ATTCCTCCAGGCCTCTAACAAGGGGTGAAATCGGCT...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCAACCAGGTTTGCCACATaGGGCACTGCTTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPTRFAT*GTAFSG
Trigger: GCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGGT...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACATCGGCTACGGGATGCTaGTTGTACATGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTSATGC*LYMTGR
Trigger: TCTGCCAGTCATGTACAACAAGCATCCCGTAGCCGA...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAATCGGCTACGGGATGCTaGTTGTACATGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKSATGC*LYMTGR
Trigger: TCTGCCAGTCATGTACAACAAGCATCCCGTAGCCGA...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS GCA 90 bp AGGTTGGCGGTGGCAGGGCCTCTGTGTTCTTGGCATTGCTGTAGATaGGGCTTTGCTTCCGGGACTTCCAGGCATGTGTCCTATCCCAGT +
Preference number: 5 (lower is better)
Translates to: RLAVAGPLCSWHCCR*GFASGTSRHVSYPS
Trigger: ACTGGGATAGGACACATGCCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCAAGAACACAGAGGCCCTGCCACCGCCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp CGACACCTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGCCGATTTCACCCCTaGTTAGAGGCCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RHLSLLFTAHQPVPGPDVSRFHP*LEAWRN
Trigger: ATTCCTCCAGGCCTCTAACAAGGGGTGAAATCGGCT...CACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAGGTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGCGGCTTCGACCAGGTTaGCCACATTGGGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLRLRPG*PHWALL
Trigger: AAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCCG...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCCTTAGGGGATATCTTTaGAGAAAGGGTGTCCGCCTG +
Preference number: 5 (lower is better)
Translates to: RGRERVPGPDAKASILTPLRGYL*RKGVRL
Trigger: CAGGCGGACACCCTTTCTCAAAAGATATCCCCTAAG...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS GCA 90 bp GATGGGGCTTCAGGGGGATGGGCAGGTAGCCATAGTGCTCTCTGTTaGAGAGGTACATCTGGATGCCTGAGGATCCAAGAGAGGGACAAA +
Preference number: 5 (lower is better)
Translates to: DGASGGWAGSHSALC*RGTSGCLRIQERDK
Trigger: TTTGTCCCTCTCTTGGATCCTCAGGCATCCAGATGTACCTCTGCAACAGAGAGCACTATGGCTACCTGCCCATCCCCCTGAAGCCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS CCA 90 bp GGTTCTCGATGTCTTCCTGCAGTGTCTGATGGGGCTTCAGGGGGATaGGCAGGTAGCCATAGTGCTCTCTGTTGCAGAGGTACATCTGGA +
Preference number: 5 (lower is better)
Translates to: GSRCLPAVSDGASGG*AGSHSALCCRGTSG
Trigger: TCCAGATGTACCTCTGCAACAGAGAGCACTATGGCTACCTGCCCATCCCCCTGAAGCCCCATCAGACACTGCAGGAAGACATCGAGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS-3UTR CAA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACGGGCAAACCGGGAGGTaGGCCAGTGCTTTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDGQTGR*ASALVQ
Trigger: TTGGACCAAAGCACTGGCCAACCTCCCGGTTTGCCC...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCTGCAATCAGTAGATaGAGGGTCTGTGGATTAGTC +
Preference number: 5 (lower is better)
Translates to: RGRERVPGPDAKASILTPSAISR*RVCGLV
Trigger: GACTAATCCACAGACCCTCAATCTACTGATTGCAGA...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCAGAGGACGGTCAATCATaGCTTCAATCTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPEDGQS*LQSAHG
Trigger: TCCATGTGCAGATTGAAGCAATGATTGACCGTCCTC...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCACTCTGGCTCCTTTACTaGCATCCTCTTCCTACCAAT +
Preference number: 5 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPLWLLY*HPLPTN
Trigger: ATTGGTAGGAAGAGGATGCAAGTAAAGGAGCCAGAG...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp CGGGCCCGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGCTCTGGCTCCTTTACTaGCATCCTCTTCCTACCAAT +
Preference number: 5 (lower is better)
Translates to: RARCEYRGGGKCRRNLEELWLLY*HPLPTN
Trigger: ATTGGTAGGAAGAGGATGCAAGTAAAGGAGCCAGAG...CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCGGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp CGGGCCCGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGATCTTCCCAAAAGGATaGGCTCCAACCAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: RARCEYRGGGKCRRNLEEIFPKG*APTSFC
Trigger: ACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGAT...CTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCGGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp AAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGTGACCAGCCCTTTGTTTCTGACGCTGTAGATGCGGCTTaGCTTCCGGGACTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: KSFPGCWPKSGDQPFVSDAVDAA*LPGLPG
Trigger: GCCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGC...GTCAGAAACAAAGGGCTGGTCACCTGATTTAGGCCAGCAACCAGGGAAGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp TGGCTGCATGGTGCATGGACAGTGATGAGGAACGGTGCTGGTATGGGATGCCTGTTCATAGCTCATCCCTaGAAGGCACAGTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: WLHGAWTVMRNGAGMGCLFIAHP*KAQCPG
Trigger: CCCTGGACACTGTGCCTTCAAGGGATGAGCTATGAA...CAGGCATCCCATACCAGCACCGTTCCTCATCACTGTCCATGCACCATGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTGTTGGCCTGGCTGCCTaGACTACATATTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: RVPGPDAKASILTPSHDTVGLAA*TTYLLM
Trigger: CATCAGCAAATATGTAGTCAAGGCAGCCAGGCCAAC...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GGAGTTGATGAACACGACCACCTCTGCCACAGAGGGGTAATGCCTTCTCCTAGGCTAGGGTGCACGGGTTaGTTCACCGTTGGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: GVDEHDHLCHRGVMPSPRLGCTG*FTVGSH
Trigger: ATGACTGCCAACGGTGAACAAACCCGTGCACCCTAG...CCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS TCA 90 bp AGGCCCCAGGCATATTCAGGGCTGTCCACACGCCCAGGAAAAACTTaGGAAGTCCCTAGTCTCTCACCTCTGGCTGACCTTAAGGATCTG +
Preference number: 5 (lower is better)
Translates to: RPQAYSGLSTRPGKT*EVPSLSPLADLKDL
Trigger: CAGATCCTTAAGGTCAGCCAGAGGTGAGAGACTAGGGACTTCTCAAGTTTTTCCTGGGCGTGTGGACAGCCCTGAATATGCCTGGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR CAA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGACCAGGTTTGCCACATaGGGCACTGCTTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKTRFAT*GTAFSG
Trigger: GCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGGT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACGGCTTCGACCAGGTTaGCCACATTGGGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPRLRPG*PHWALL
Trigger: AAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCCG...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAGCTGTAGATGCGGCTTaGCTTCCGGGACTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPAVDAA*LPGLPG
Trigger: GCCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGC...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp GCAGCAGGCCTGAATGAACCGCAAGCGGGGCCCATGCAGCGTGTCCTCTGCAAACATGAGAACATAAACTaGAGGGAAACCACCATGATC +
Preference number: 5 (lower is better)
Translates to: AAGLNEPQAGPMQRVLCKHENIN*RETTMI
Trigger: GATCATGGTGGTTTCCCTCAAGTTTATGTTCTCATG...TTTGCAGAGGACACGCTGCATGGGCCCCGCTTGCGGTTCATTCAGGCCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCACTCCAGCGGCCTAGCTaGCTGGTCAGTGTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPLQRPS*LVSVEG
Trigger: CCCTTCTACACTGACCAGCAAGCTAGGCCGCTGGAG...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp AGAGGCAGAGAGCGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCAGGTCCATAGGGAGTTaGATTTGCTCCAAAATATCC +
Preference number: 5 (lower is better)
Translates to: RGRERVPGPDAKASILTPRSIGS*ICSKIS
Trigger: GGATATTTTGGAGCAAATCAAACTCCCTATGGACCT...GGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCGCTCTCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR CAA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTAGCCCTACAAAAGCCTaGAAAACCAGTAGCCTCACA +
Preference number: 5 (lower is better)
Translates to: RVPGPDAKASILTPSHDTSPTKA*KTSSLT
Trigger: TGTGAGGCTACTGGTTTTCAAGGCTTTTGTAGGGCT...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS GCA 90 bp GAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTaGCACAGAGGGGTAATGCCTTCTCCTAGGGTGCACGGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: EMQEKPGGVDEHDHL*HRGVMPSPRVHGFV
Trigger: AACAAACCCGTGCACCCTAGGAGAAGGCATTACCCCTCTGTGGCAGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486375.2
ENST00000649786.1
CDS-3UTR CAA 90 bp GAGAGCGTGAAGCTCTGTAGCAGCGCGCAAACCCGGGACAGGGCAGGATGCACATCATCAAATCCCATCTaGTCTGGATATTTAGGGACA +
Preference number: 5 (lower is better)
Translates to: ESVKLCSSAQTRDRAGCTSSNPI*SGYLGT
Trigger: TGTCCCTAAATATCCAGACAAGATGGGATTTGATGA...TGTGCATCCTGCCCTGTCCCGGGTTTGCGCGCTGCTACAGAGCTTCACGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGCTGTAGATGCGGCTTaGCTTCCGGGACTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIAVDAA*LPGLPG
Trigger: GCCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTCTCCAGCGGCCTAGCTaGCTGGTCAGTGTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: KSQSDPNTHPYWITGTKILQRPS*LVSVEG
Trigger: CCCTTCTACACTGACCAGCAAGCTAGGCCGCTGGAG...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp CTGTCACTTCTGTTCACAGCCCATCAACCAGTCCCCGGGCCCGATGTGAGTACAGTCATCAGAAAGTGTTaGGAAGAGATGGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LSLLFTAHQPVPGPDVSTVIRKC*EEMAVR
Trigger: CCTCACTGCCATCTCTTCCAAACACTTTCTGATGAC...TGTACTCACATCGGGCCCGGGGACTGGTTGATGGGCTGTGAACAGAAGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp ACAGCAGCTCACAGATCCAGGCAGCTTCCATCTTGCAACTTCGCCATCTCGGTGGAGGACGGTCAATCATaGCTTCAATCTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: TAAHRSRQLPSCNFAISVEDGQS*LQSAHG
Trigger: TCCATGTGCAGATTGAAGCAATGATTGACCGTCCTC...CACCGAGATGGCGAAGTTGCAAGATGGAAGCTGCCTGGATCTGTGAGCTGCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp GCTTCCATCTTGCAACTTCGCCATCTCGGTGTTTCCCTTCCAGTCACAGTGATGACTGGGAGGGTTCCATaGGAGGACGGTCAATCATTG +
Preference number: 5 (lower is better)
Translates to: ASILQLRHLGVSLPVTVMTGRVP*EDGQSL
Trigger: CAATGATTGACCGTCCTCCAATGGAACCCTCCCAGT...CATCACTGTGACTGGAAGGGAAACACCGAGATGGCGAAGTTGCAAGATGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp CTTGTGTATGTAGCACCACCCGCCTGTGGACTCTGCTCTGAAGGGCCCTCCCCACTGTCCTTTCTGCGTTaGAGGTTTATCATGAAAATC +
Preference number: 5 (lower is better)
Translates to: LVYVAPPACGLCSEGPSPLSFLR*RFIMKI
Trigger: GATTTTCATGATAAACCTCAAACGCAGAAAGGACAG...TGGGGAGGGCCCTTCAGAGCAGAGTCCACAGGCGGGTGGTGCTACATACACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp GGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTTTCAGCTGGCTTGTGTaGAGTGCCTTTCCATCCACA +
Preference number: 5 (lower is better)
Translates to: GGGKCRRNLEELMNTTTSFSWLV*SAFPST
Trigger: TGTGGATGGAAAGGCACTCAACACAAGCCAGCTGAA...AGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp AAACTGTTCCCAACTGCCTTAGACCAAAGCGACACCTGTCACTTCTGTTCACAGCGGCTTCGACCAGGTTaGCCACATTGGGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: KLFPTALDQSDTCHFCSQRLRPG*PHWALL
Trigger: AAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCCG...CTGTGAACAGAAGTGACAGGTGTCGCTTTGGTCTAAGGCAGTTGGGAACAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGGCTACGGGATGCTTGTaGTACATGACTGGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: KGCPPGILRASLVAGLNQATGCL*YMTGRN
Trigger: GTTTCTGCCAGTCATGTACAACAAGCATCCCGTAGC...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCTTAGGGGATATCTTTaGAGAAAGGGTGTCCGCCTG +
Preference number: 5 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKLRGYL*RKGVRL
Trigger: CAGGCGGACACCCTTTCTCAAAAGATATCCCCTAAG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGCGGGTTTGTTCACCGTaGGCAGTCATCAGAAAGTGT +
Preference number: 5 (lower is better)
Translates to: EYRGGGKCRRNLEELMNTRVCSP*AVIRKC
Trigger: ACACTTTCTGATGACTGCCAACGGTGAACAAACCCG...CGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp CGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAGGACGGGATGCTTGTaGTACATGACTGGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: RCEYRGGGKCRRNLEELMRTGCL*YMTGRN
Trigger: GTTTCTGCCAGTCATGTACAACAAGCATCCCGTCCT...CATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp GCTTCCATCTTGCAACTTCGCCATCTCGGTGTTTCCCTTCCAGTCACAGTGATGAGGAGGACGGGATGCTaGTTGTACATGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: ASILQLRHLGVSLPVTVMRRTGC*LYMTGR
Trigger: TCTGCCAGTCATGTACAACAAGCATCCCGTCCTCCT...CATCACTGTGACTGGAAGGGAAACACCGAGATGGCGAAGTTGCAAGATGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS TCA 90 bp GTTCCATTGGAGGACGGTCAATCATTGCTTCAATCTGCACATGGATaGGGTTCTCGATGTCTTCCTGCAGTGTCTGATGGGGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: VPLEDGQSLLQSAHG*GSRCLPAVSDGASG
Trigger: CCCTGAAGCCCCATCAGACACTGCAGGAAGACATCGAGAACCTCATCCATGTGCAGATTGAAGCAATGATTGACCGTCCTCCAATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS-3UTR CAA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCAAGGTTGGCCAGTGCTTaGGTCCAATTTCATCAGGGT +
Preference number: 5 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPRLASA*VQFHQG
Trigger: ACCCTGATGAAATTGGACCAAAGCACTGGCCAACCT...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp TCTCTAACAGCAGCTCACAGATCCAGGCAGCTTCCATCTTGCAACTTCGCCATCAGGTTGGCCAGTGCTTaGGTCCAATTTCATCAGGGT +
Preference number: 5 (lower is better)
Translates to: SLTAAHRSRQLPSCNFAIRLASA*VQFHQG
Trigger: ACCCTGATGAAATTGGACCAAAGCACTGGCCAACCT...GATGGCGAAGTTGCAAGATGGAAGCTGCCTGGATCTGTGAGCTGCTGTTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGGAGGACGGTCAATCATaGCTTCAATCTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKEDGQS*LQSAHG
Trigger: TCCATGTGCAGATTGAAGCAATGATTGACCGTCCTC...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAACTGGGAGGGTTCCATaGGAGGACGGTCAATCATTG +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPTGRVP*EDGQSL
Trigger: CAATGATTGACCGTCCTCCAATGGAACCCTCCCAGT...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CAA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGACAGCCTCGACAATCTaGACCTCAATCTCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKTASTI*TSISCS
Trigger: TGAACAGGAGATTGAGGTCAAGATTGTCGAGGCTGT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CAA 90 bp CGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGACAGCCTCGACAATCTaGACCTCAATCTCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: RCEYRGGGKCRRNLEELMTASTI*TSISCS
Trigger: TGAACAGGAGATTGAGGTCAAGATTGTCGAGGCTGT...CATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATCTTCCCAAAAGGATaGGCTCCAACCAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKIFPKG*APTSFC
Trigger: ACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGAT...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCATCGGCTACGGGATGCTaGTTGTACATGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPSATGC*LYMTGR
Trigger: TCTGCCAGTCATGTACAACAAGCATCCCGTAGCCGA...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCATTCATAGCTCATCCCTaGAAGGCACAGTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPFIAHP*KAQCPG
Trigger: CCCTGGACACTGTGCCTTCAAGGGATGAGCTATGAA...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp AAAGGGTGTCCGCCTGGGATTCTAAGAGCTTCCCTGGTTGCTGGCCTAAATCAGTTCAGGAGAATCAGATaGCCGAACCAATGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: KGCPPGILRASLVAGLNQFRRIR*PNQCVH
Trigger: GTGGACACATTGGTTCGGCAATCTGATTCTCCTGAA...CTGATTTAGGCCAGCAACCAGGGAAGCTCTTAGAATCCCAGGCGGACACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCCTGCTGATGTCACGGTaGTCTGTCCAGAAGATCCCA +
Preference number: 5 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLLLMSR*SVQKIP
Trigger: TGGGATCTTCTGGACAGACAACCGTGACATCAGCAG...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAGGTGTCCACTCTTTCTaGTTCTCAGAGCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPGVHSF*FSELLQ
Trigger: CTGCAGGAGCTCTGAGAACAAGAAAGAGTGGACACC...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS GCA 90 bp TGGGCAGGTAGCCATAGTGCTCTCTGTTGCAGAGGTACATCTGGATaGCTGAGGATCCAAGAGAGGGACAAAGCCAACAATCAGAAAACA +
Preference number: 5 (lower is better)
Translates to: WAGSHSALCCRGTSG*LRIQERDKANNQKT
Trigger: TGTTTTCTGATTGTTGGCTTTGTCCCTCTCTTGGATCCTCAGGCATCCAGATGTACCTCTGCAACAGAGAGCACTATGGCTACCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS CCA 90 bp CAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTaGGCCACACTCCCAGGGAGCCTTCATAGCTCATCCCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: QMNSPLEKPEDVELM*ATLPGSLHSSSLEG
Trigger: GCCTTCAAGGGATGAGCTATGAAGGCTCCCTGGGAGTGTGGCCCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp CGGGTGCCAGGCCCAGATGCAAAGGCCTCTATACTGACGCCCTCACATGACACTGGATTAGTCAGGAAATaGTCAACATCTATGAACAGA +
Preference number: 5 (lower is better)
Translates to: RVPGPDAKASILTPSHDTGLVRK*STSMNR
Trigger: TCTGTTCATAGATGTTGACAATTTCCTGACTAATCC...AGTGTCATGTGAGGGCGTCAGTATAGAGGCCTTTGCATCTGGGCCTGGCACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp CGATGTGAGTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGTCTGCAATCAGTAGATaGAGGGTCTGTGGATTAGTC +
Preference number: 5 (lower is better)
Translates to: RCEYRGGGKCRRNLEELMSAISR*RVCGLV
Trigger: GACTAATCCACAGACCCTCAATCTACTGATTGCAGA...CATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTACTCACATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp CCTGGCTGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCAACAGCCTCGACAATCTaGACCTCAATCTCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: PGWEIQENQIAEPMCPHPTASTI*TSISCS
Trigger: TGAACAGGAGATTGAGGTCAAGATTGTCGAGGCTGT...TGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361927.9
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCATTCAGCTGGCTTGTGTaGAGTGCCTTTCCATCCACA +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPFSWLV*SAFPST
Trigger: TGTGGATGGAAAGGCACTCAACACAAGCCAGCTGAA...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAGCTACGGGATGCTTGTaGTACATGACTGGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPATGCL*YMTGRN
Trigger: GTTTCTGCCAGTCATGTACAACAAGCATCCCGTAGC...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTCTGCTGATGTCACGGTaGTCTGTCCAGAAGATCCCA +
Preference number: 5 (lower is better)
Translates to: KSQSDPNTHPYWITGTKILLMSR*SVQKIP
Trigger: TGGGATCTTCTGGACAGACAACCGTGACATCAGCAG...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGGTGTCCACTCTTTCTaGTTCTCAGAGCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIGVHSF*FSELLQ
Trigger: CTGCAGGAGCTCTGAGAACAAGAAAGAGTGGACACC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS TCA 90 bp TCTCTAGCTCTCGATCAATTACCTCTTTCCAGACTGAGTAGTGGCTaGGAAAGCAGCCGATTTCACCCCTTGTTAGAGGCCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: SLALDQLPLSRLSSG*ESSRFHPLLEAWRN
Trigger: ATTCCTCCAGGCCTCTAACAAGGGGTGAAATCGGCTGCTTTCTCAGCCACTACTCAGTCTGGAAAGAGGTAATTGATCGAGAGCTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
ENST00000649786.1
CDS TCA 90 bp TCCTTGGTCAAGGGCAGACCTGGTAATCTCTGCAGCGTTGGCCATTaGTCAGTGCCTGCGGAAGCAATTGACAATCATATCTTTGAGCTA +
Preference number: 5 (lower is better)
Translates to: SLVKGRPGNLCSVGH*SVPAEAIDNHIFEL
Trigger: TAGCTCAAAGATATGATTGTCAATTGCTTCCGCAGGCACTGATCAATGGCCAACGCTGCAGAGATTACCAGGTCTGCCCTTGACCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS-3UTR CAA 90 bp GGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACCACCTCTGCCCTGTCCTTTCTGCGTTaGAGGTTTATCATGAAAATC +
Preference number: 5 (lower is better)
Translates to: GGKCRRNLEELMNTTTSALSFLR*RFIMKI
Trigger: GATTTTCATGATAAACCTCAAACGCAGAAAGGACAG...GGCAGAGGTGGTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTTCAGCTGGCTTGTGTaGAGTGCCTTTCCATCCACA +
Preference number: 5 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIFSWLV*SAFPST
Trigger: TGTGGATGGAAAGGCACTCAACACAAGCCAGCTGAA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCAATCTTCCCAAAAGGATaGGCTCCAACCAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPIFPKG*APTSFC
Trigger: ACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGAT...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCATCTTCCCAAAAGGATaGGCTCCAACCAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLIFPKG*APTSFC
Trigger: ACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGAT...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GTGGGAAAGGAAGTCACACTGACAGCTAAGTCTAAGCGGCACAATTTAGAGTTGTTCATAGCTCATCCCTaGAAGGCACAGTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: VGKEVTLTAKSKRHNLELFIAHP*KAQCPG
Trigger: CCCTGGACACTGTGCCTTCAAGGGATGAGCTATGAA...CAACTCTAAATTGTGCCGCTTAGACTTAGCTGTCAGTGTGACTTCCTTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp TGGGAAATTCAGGAGAATCAGATTGCCGAACCAATGTGTCCACACCCACCACTCTTCAGGAGAATCAGATaGCCGAACCAATGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: WEIQENQIAEPMCPHPPLFRRIR*PNQCVH
Trigger: GTGGACACATTGGTTCGGCAATCTGATTCTCCTGAA...GAGTGGTGGGTGTGGACACATTGGTTCGGCAATCTGATTCTCCTGAATTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCATGAGAACATAAACTaGAGGGAAACCACCATGATC +
Preference number: 5 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKHENIN*RETTMI
Trigger: GATCATGGTGGTTTCCCTCAAGTTTATGTTCTCATG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGGAGATGAGGCTGCCTaGACTACCTATTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIGDEAA*TTYLVM
Trigger: CATCACCAAATAGGTAGTCAAGGCAGCCTCATCTCC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS TCA 90 bp CAGGTAGCCATAGTGCTCTCTGTTGCAGAGGTACATCTGGATGCCTaGGGATCCAAGAGAGGGACAAAGCCAACAATCAGAAAACATACT +
Preference number: 5 (lower is better)
Translates to: QVAIVLSVAEVHLDA*GSKRGTKPTIRKHT
Trigger: AGTATGTTTTCTGATTGTTGGCTTTGTCCCTCTCTTGGATCCTCAGGCATCCAGATGTACCTCTGCAACAGAGAGCACTATGGCTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS TCA 90 bp GACTGGTATCACAGTATCTCAGTATCTTTTGATGAACGGATAGGCTaGCCTGTAGCACAAAATGCAAGATGGACACCTCCACTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: DWYHSISVSFDERIG*PVAQNARWTPPLPP
Trigger: GGGAGGGAGTGGAGGTGTCCATCTTGCATTTTGTGCTACAGGTCAGCCTATCCGTTCATCAAAAGATACTGAGATACTGTGATACCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS-3UTR CAA 90 bp GTACAGGGGAGGTGGGAAATGCAGGAGAAACCTGGAGGAGTTGATGAACACGACTCATCAAATCCCATCTaGTCTGGATATTTAGGGACA +
Preference number: 5 (lower is better)
Translates to: VQGRWEMQEKPGGVDEHDSSNPI*SGYLGT
Trigger: TGTCCCTAAATATCCAGACAAGATGGGATTTGATGA...GTCGTGTTCATCAACTCCTCCAGGTTTCTCCTGCATTTCCCACCTCCCCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS-3UTR CAA 90 bp GCCAAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGCTGTCCTTTCTGCGTTaGAGGTTTATCATGAAAATC +
Preference number: 5 (lower is better)
Translates to: AKSQSDPNTHPYWITGTKLSFLR*RFIMKI
Trigger: GATTTTCATGATAAACCTCAAACGCAGAAAGGACAG...CTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CAA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGCGGCTTCGACCAGGTTaGCCACATTGGGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWRLRPG*PHWALL
Trigger: AAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCCG...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGGTGGCCACTGTCTCATaGTCCCAGATGGTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWVATVS*SQMVEV
Trigger: GACCTCCACCATCTGGGACAATGAGACAGTGGCCAC...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACGGAGATGAGGCTGCCTaGACTACCTATTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNGDEAA*TTYLVM
Trigger: CATCACCAAATAGGTAGTCAAGGCAGCCTCATCTCC...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACCGGCACAATTTAGAGTaGGGTGAGTTCCCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNRHNLE*GEFPFL
Trigger: GAGGAAAGGGAACTCACCCAACTCTAAATTGTGCCG...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACTTCAGCTGGCTTGTGTaGAGTGCCCTGCATCACATA +
Preference number: 5 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNFSWLV*SALHHI
Trigger: TATGTGATGCAGGGCACTCAACACAAGCCAGCTGAA...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR CAA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACCTCTGGCTCCTTTACTaGCATCCTCTTCCTACCAAT +
Preference number: 5 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNLWLLY*HPLPTN
Trigger: ATTGGTAGGAAGAGGATGCAAGTAAAGGAGCCAGAG...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367521.5
CDS-3UTR CAA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGACCAGGTTTGCCACATaGGGCACTGCTTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWTRFAT*GTAFSG
Trigger: GCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGGT...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCACTGTCTAGTAGCTCCTaGAAAAGCTACATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPLSSSS*KSYILR
Trigger: TCTGAGAATGTAGCTTTTCAAGGAGCTACTAGACAG...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS CCA 90 bp TCAAATCCCATCTTGTCTGGATATTTAGGGACAACTGAGACATACTaGGAGGGTTCCATTGGAGGACGGTCAATCATTGCTTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: SNPILSGYLGTTETY*EGSIGGRSIIASIC
Trigger: GCAGATTGAAGCAATGATTGACCGTCCTCCAATGGAACCCTCCCAGTATGTCTCAGTTGTCCCTAAATATCCAGACAAGATGGGATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS-3UTR CAA 90 bp GCAAACTGGTCACCTCTATATGAGAACTCCAACTGCCATGATGGTCACAGGCCATCATCAAATCCCATCTaGTCTGGATATTTAGGGACA +
Preference number: 5 (lower is better)
Translates to: ANWSPLYENSNCHDGHRPSSNPI*SGYLGT
Trigger: TGTCCCTAAATATCCAGACAAGATGGGATTTGATGA...TGGCCTGTGACCATCATGGCAGTTGGAGTTCTCATATAGAGGTGACCAGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000367520.3
CDS-3UTR CAA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGAGCCGATTTCACCCCTaGTTAGAGGCCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWSRFHP*LEAWRN
Trigger: ATTCCTCCAGGCCTCTAACAAGGGGTGAAATCGGCT...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp TCACCAGAAAAGAACACTGCTTGGGATTCTAGACCTGAGCAGGGAGAAACAAACCTATCTGCAGGTCATTaGTCAAAACCCATGAGCAAC +
Preference number: 5 (lower is better)
Translates to: SPEKNTAWDSRPEQGETNLSAGH*SKPMSN
Trigger: GTTGCTCATGGGTTTTGACAAATGACCTGCAGATAG...GTTTGTTTCTCCCTGCTCAGGTCTAGAATCCCAAGCAGTGTTCTTTTCTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR CAA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTGAGGGTATCATATTTTaGTGTATCCCTCATAGTGCC +
Preference number: 5 (lower is better)
Translates to: KSQSDPNTHPYWITGTKIEGIIF*CIPHSA
Trigger: GGCACTATGAGGGATACACAAAAATATGATACCCTC...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS-3UTR CAA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGGTTGGCCTGGCTGCCTaGACTACATATTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWVGLAA*TTYLLM
Trigger: CATCAGCAAATATGTAGTCAAGGCAGCCAGGCCAAC...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp AGCAAACAGATGAATAGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTGGCTCTGGCTCCTTTACTaGCATCCTCTTCCTACCAAT +
Preference number: 5 (lower is better)
Translates to: SKQMNSPLEKPEDVELMWLWLLY*HPLPTN
Trigger: ATTGGTAGGAAGAGGATGCAAGTAAAGGAGCCAGAG...CCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCTATTCATCTGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS-3UTR CAA 90 bp AAGTCTCAGTCGGACCCAAATACCCACCCCTACTGGATAACAGGGACTAAGATTTGTCTGATGCTGAGTTaGACACTGCAATTAAATAAG +
Preference number: 5 (lower is better)
Translates to: KSQSDPNTHPYWITGTKICLMLS*TLQLNK
Trigger: CTTATTTAATTGCAGTGTCAAACTCAGCATCAGACA...AATCTTAGTCCCTGTTATCCAGTAGGGGTGGGTATTTGGGTCCGACTGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS-3UTR CAA 90 bp AAACTCCTTAGTAGCTTTTCTCTAACAGCAGCTCACAGATCCAGGCAGCTTCCAGGATTAGTCAGGAAATaGTCAACATCTATGAACAGA +
Preference number: 5 (lower is better)
Translates to: KLLSSFSLTAAHRSRQLPGLVRK*STSMNR
Trigger: TCTGTTCATAGATGTTGACAATTTCCTGACTAATCC...TGGAAGCTGCCTGGATCTGTGAGCTGCTGTTAGAGAAAAGCTACTAAGGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649786.1
CDS GCA 72 bp CACCGCCCAGGCCCCAGTGCGGGTGCGCAGCGTACCTaGAGCCGCTGGCGCTCCCCTGCGCCTCGGGCTCGC +
Preference number: 6 (lower is better)
Translates to: HRPGPSAGAQRT*SRWRSPAPRAR
Trigger: GCGAGCCCGAGGCGCAGGGGAGCGCCAGCGGCTGCAGGTACGCTGCGCACCCGCACTGGGGCCTGGGCGGTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS CCA 72 bp GGGATGCGGCTTGCCGCGGCCGGCCGGCTCACACACTaGCCTCGGCGGCTGCGGTTCCCAGGACCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: GMRLAAAGRLTH*PRRLRFPGPSR
Trigger: GCGGGAGGGTCCTGGGAACCGCAGCCGCCGAGGCCAGTGTGTGAGCCGGCCGGCCGCGGCAAGCCGCATCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS GCA 72 bp GGCAGCCGAGGAAGTGCGGCAGCGTGTGCGCCGCGTTaGGGGCGAGGACCGCCACGAGCACCGTGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: GSRGSAAACAPR*GRGPPRAPWGS
Trigger: AGAGCCCCACGGTGCTCGTGGCGGTCCTCGCCCGCAACGCGGCGCACACGCTGCCGCACTTCCTCGGCTGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS CAA 72 bp AGGCAGCCGAGGAAGTGCGGCAGCGTGTGCGCCGCGTaGCGGGCGAGGACCGCCACGAGCACCGTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: RQPRKCGSVCAA*RARTATSTVGL
Trigger: GAGCCCCACGGTGCTCGTGGCGGTCCTCGCCCGCAACGCGGCGCACACGCTGCCGCACTTCCTCGGCTGCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS CCA 72 bp GGGCTGAGGAGAGGAGCAGTAGCGACCAGGCGAGGGTaGCAGCAGGGCGCGCAGCCATGTTCCGGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: GLRRGAVATRRG*QQGAQPCSGPR
Trigger: CCTCGGCCCGGAACATGGCTGCGCGCCCTGCTGCCACCCTCGCCTGGTCGCTACTGCTCCTCTCCTCAGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS CCA 72 bp CCCAGTCGGTGGCCACTGTCTCATTGTCCCAGATGGTaGAGGTCTCCGTGTCACTCAGGTACCCCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: PSRWPLSHCPRW*RSPCHSGTPAG
Trigger: GCCAGCCGGGGTACCTGAGTGACACGGAGACCTCCACCATCTGGGACAATGAGACAGTGGCCACCGACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS CAA 72 bp GGGCCACACTCCCAGGGAGCCTTCATAGCTCATCCCTaGAAGGCACAGTGTCCAGGGAGGTTGGCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: GPHSQGAFIAHP*KAQCPGRLAVA
Trigger: TGCCACCGCCAACCTCCCTGGACACTGTGCCTTCAAGGGATGAGCTATGAAGGCTCCCTGGGAGTGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS CAA 90 bp GACTTCCAGGCATGTGTCCTATCCCAGTCGGTGGCCACTGTCTCATaGTCCCAGATGGTGGAGGTCTCCGTGTCACTCAGGTACCCCGGC +
Preference number: 6 (lower is better)
Translates to: DFQACVLSQSVATVS*SQMVEVSVSLRYPG
Trigger: GCCGGGGTACCTGAGTGACACGGAGACCTCCACCATCTGGGACAATGAGACAGTGGCCACCGACTGGGATAGGACACATGCCTGGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS CAA 90 bp CGGTGGCAGGGCCTCTGTGTTCTTGGCATTGCTGTAGATGCGGCTTaGCTTCCGGGACTTCCAGGCATGTGTCCTATCCCAGTCGGTGGC +
Preference number: 6 (lower is better)
Translates to: RWQGLCVLGIAVDAA*LPGLPGMCPIPVGG
Trigger: GCCACCGACTGGGATAGGACACATGCCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCAAGAACACAGAGGCCCTGCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS GCA 72 bp AGGTTGGCGGTGGCAGGGCCTCTGTGTTCTTGGCATTaGTGTAGATGCGGCTTTGCTTCCGGGACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: RLAVAGPLCSWH*CRCGFASGTSR
Trigger: CCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCAAGAACACAGAGGCCCTGCCACCGCCAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS CAA 90 bp GGAGCCTTCATAGCTCATCCCTTGAAGGCACAGTGTCCAGGGAGGTaGGCGGTGGCAGGGCCTCTGTGTTCTTGGCATTGCTGTAGATGC +
Preference number: 6 (lower is better)
Translates to: GAFIAHPLKAQCPGR*AVAGPLCSWHCCRC
Trigger: GCATCTACAGCAATGCCAAGAACACAGAGGCCCTGCCACCGCCAACCTCCCTGGACACTGTGCCTTCAAGGGATGAGCTATGAAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS GCA 72 bp TCAGGGGGATGGGCAGGTAGCCATAGTGCTCTCTGTTaGAGAGGTACATCTGGATGCCTGCTTGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SGGWAGSHSALC*RGTSGCLLACW
Trigger: CCAGCAGGCAAGCAGGCATCCAGATGTACCTCTGCAACAGAGAGCACTATGGCTACCTGCCCATCCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS GCA 72 bp GTGGCAGGGCCTCTGTGTTCTTGGCATTGCTGTAGATaGGGCTTTGCTTCCGGGACTTCCAGGCATGTGTCC +
Preference number: 6 (lower is better)
Translates to: VAGPLCSWHCCR*GFASGTSRHVS
Trigger: GGACACATGCCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCAAGAACACAGAGGCCCTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS GCA 72 bp GGCAGCCACCTGCTTTATGTTGCTCCTCCATTGGACTaGGGGCCCCACACAGCAGTAGGGACCTTACCTACT +
Preference number: 6 (lower is better)
Translates to: GSHLLYVAPPLD*GPHTAVGTLPT
Trigger: AGTAGGTAAGGTCCCTACTGCTGTGTGGGGCCCGCAGTCCAATGGAGGAGCAACATAAAGCAGGTGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS CCA 72 bp TCCGGGACTTCCAGGCATGTGTCCTATCCCAGTCGGTaGCCACTGTCTCATTGTCCCAGATGGTGGAGGTCT +
Preference number: 6 (lower is better)
Translates to: SGTSRHVSYPSR*PLSHCPRWWRS
Trigger: AGACCTCCACCATCTGGGACAATGAGACAGTGGCCACCGACTGGGATAGGACACATGCCTGGAAGTCCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS CCA 72 bp GCAGTTCGAAGGGCTGCCTGTCGTAGTTTCATCACATaGGCAAACCGGGAGGTTGGCCAGTGCTTTGGTCCA +
Preference number: 6 (lower is better)
Translates to: AVRRAACRSFIT*ANREVGQCFGP
Trigger: TGGACCAAAGCACTGGCCAACCTCCCGGTTTGCCCATGTGATGAAACTACGACAGGCAGCCCTTCGAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS CCA 72 bp TGTCTTCCTGCAGTGTCTGATGGGGCTTCAGGGGGATaGGCAGGTAGCCATAGTGCTCTCTGTTGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: CLPAVSDGASGG*AGSHSALCCRG
Trigger: ACCTCTGCAACAGAGAGCACTATGGCTACCTGCCCATCCCCCTGAAGCCCCATCAGACACTGCAGGAAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS CAA 72 bp CTGTTTGGCAGCCACCTGCTTTATGTTGCTCCTCCATaGGACTGCGGGCCCCACACAGCAGTAGGGACCTTA +
Preference number: 6 (lower is better)
Translates to: LFGSHLLYVAPP*DCGPHTAVGTL
Trigger: TAAGGTCCCTACTGCTGTGTGGGGCCCGCAGTCCAATGGAGGAGCAACATAAAGCAGGTGGCTGCCAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS GCA 72 bp TCAGGGGGATGGGCAGGTAGCCATAGTGCTCTCTGTTaGAGAGGTACATCTGGATGCCTGAGGATCCAAGAG +
Preference number: 6 (lower is better)
Translates to: SGGWAGSHSALC*RGTSGCLRIQE
Trigger: CTCTTGGATCCTCAGGCATCCAGATGTACCTCTGCAACAGAGAGCACTATGGCTACCTGCCCATCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS CAA 72 bp GGCCTCTGTGTTCTTGGCATTGCTGTAGATGCGGCTTaGCTTCCGGGACTTCCAGGCATGTGTCCTATCCCA +
Preference number: 6 (lower is better)
Translates to: GLCVLGIAVDAA*LPGLPGMCPIP
Trigger: TGGGATAGGACACATGCCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCAAGAACACAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS GCA 72 bp CATCTTCCCAAAAGGATTGGCTCCAACCAGCTTCTGTaGTCCTTCCAGAGAGATGACGTAGCCCAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: HLPKRIGSNQLL*SFQRDDVAQGP
Trigger: TGGACCCTGGGCTACGTCATCTCTCTGGAAGGAGCACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
ENST00000649786.1
CDS CAA 72 bp CCTTGGTCAAGGGCAGACCTGGTAATCTCTGCAGCGTaGGCCATTGATCAGTGCCTGCGGAAGCAATTGACA +
Preference number: 6 (lower is better)
Translates to: PWSRADLVISAA*AIDQCLRKQLT
Trigger: TGTCAATTGCTTCCGCAGGCACTGATCAATGGCCAACGCTGCAGAGATTACCAGGTCTGCCCTTGACCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS CAA 72 bp ATAAAACCATCCTGTTTGGCAGCCACCTGCTTTATGTaGCTCCTCCATTGGACTGCGGGCCCCACACAGCAG +
Preference number: 6 (lower is better)
Translates to: IKPSCLAATCFM*LLHWTAGPTQQ
Trigger: CTGCTGTGTGGGGCCCGCAGTCCAATGGAGGAGCAACATAAAGCAGGTGGCTGCCAAACAGGATGGTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS CAA 90 bp AGCTGGCTTGTGTTGAGTGCCTTTCCATCCACAGCCTCGACAATCTaGACCTCAATCTCCTGTTCATACAGTGTGCGCAGCATCCGGTCC +
Preference number: 6 (lower is better)
Translates to: SWLVLSAFPSTASTI*TSISCSYSVRSIRS
Trigger: GGACCGGATGCTGCGCACACTGTATGAACAGGAGATTGAGGTCAAGATTGTCGAGGCTGTGGATGGAAAGGCACTCAACACAAGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS CAA 90 bp AAAACCATCCTGTTTGGCAGCCACCTGCTTTATGTTGCTCCTCCATaGGACTGCGGGCCCCACACAGCAGTAGGGACCTTACCTACTTCT +
Preference number: 6 (lower is better)
Translates to: KTILFGSHLLYVAPP*DCGPHTAVGTLPTS
Trigger: AGAAGTAGGTAAGGTCCCTACTGCTGTGTGGGGCCCGCAGTCCAATGGAGGAGCAACATAAAGCAGGTGGCTGCCAAACAGGATGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS TCA 72 bp GCATATTCAGGGCTGTCCACACGCCCAGGAAAAACTTaGGAAGTCCCTAGTCTCTCACCTCTGGCTGACCTT +
Preference number: 6 (lower is better)
Translates to: AYSGLSTRPGKT*EVPSLSPLADL
Trigger: AAGGTCAGCCAGAGGTGAGAGACTAGGGACTTCTCAAGTTTTTCCTGGGCGTGTGGACAGCCCTGAATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS CCA 72 bp CATCACATGGGCAAACCGGGAGGTTGGCCAGTGCTTTaGTCCAATTTCATCAGGGTAAGACTCTGGTTCATC +
Preference number: 6 (lower is better)
Translates to: HHMGKPGGWPVL*SNFIRVRLWFI
Trigger: GATGAACCAGAGTCTTACCCTGATGAAATTGGACCAAAGCACTGGCCAACCTCCCGGTTTGCCCATGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS CCA 72 bp GCCTGTCCTCTTCCATTCTCGAATCTGAACGTAGTCTaGGGTCCTCTTATAGAAGCCCTTAGGGGTGATTCC +
Preference number: 6 (lower is better)
Translates to: ACPLPFSNLNVV*GPLIEALRGDS
Trigger: GGAATCACCCCTAAGGGCTTCTATAAGAGGACCCCAGACTACGTTCAGATTCGAGAATGGAAGAGGACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS CCA 72 bp GAAACTCATCCACTGGCAGCATCTTCCCAAAAGGATTaGCTCCAACCAGCTTCTGTGCTCCTTCCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: ETHPLAASSQKD*LQPASVLLPER
Trigger: TCTCTCTGGAAGGAGCACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGATGCTGCCAGTGGATGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
ENST00000649786.1
CDS CCA 72 bp AGCCCTTTAGAAAAACCAGAGGATGTTGAACTGATGTaGGCCACACTCCCAGGGAGCCTTCATAGCTCATCC +
Preference number: 6 (lower is better)
Translates to: SPLEKPEDVELM*ATLPGSLHSSS
Trigger: GGATGAGCTATGAAGGCTCCCTGGGAGTGTGGCCCACATCAGTTCAACATCCTCTGGTTTTTCTAAAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
CDS CAA 72 bp CCTGTCGTAGTTTCATCACATGGGCAAACCGGGAGGTaGGCCAGTGCTTTGGTCCAATTTCATCAGGGTAAG +
Preference number: 6 (lower is better)
Translates to: PVVVSSHGQTGR*ASALVQFHQGK
Trigger: CTTACCCTGATGAAATTGGACCAAAGCACTGGCCAACCTCCCGGTTTGCCCATGTGATGAAACTACGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS CAA 72 bp GTGTTGAGTGCCTTTCCATCCACAGCCTCGACAATCTaGACCTCAATCTCCTGTTCATACAGTGTGCGCAGC +
Preference number: 6 (lower is better)
Translates to: VLSAFPSTASTI*TSISCSYSVRS
Trigger: GCTGCGCACACTGTATGAACAGGAGATTGAGGTCAAGATTGTCGAGGCTGTGGATGGAAAGGCACTCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS CAA 72 bp AGAAACTCATCCACTGGCAGCATCTTCCCAAAAGGATaGGCTCCAACCAGCTTCTGTGCTCCTTCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: RNSSTGSIFPKG*APTSFCAPSRE
Trigger: CTCTCTGGAAGGAGCACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGATGCTGCCAGTGGATGAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
ENST00000649786.1
CDS CAA 90 bp CCTCCTCTGCCCATTTTGTTCATCTCTGAAATAAAACCATCCTGTTaGGCAGCCACCTGCTTTATGTTGCTCCTCCATTGGACTGCGGGC +
Preference number: 6 (lower is better)
Translates to: PPLPILFISEIKPSC*AATCFMLLLHWTAG
Trigger: GCCCGCAGTCCAATGGAGGAGCAACATAAAGCAGGTGGCTGCCAAACAGGATGGTTTTATTTCAGAGATGAACAAAATGGGCAGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS TCA 72 bp GAGGACGGTCAATCATTGCTTCAATCTGCACATGGATaGGGTTCTCGATGTCTTCCTGCAGTGTCTGATGGG +
Preference number: 6 (lower is better)
Translates to: EDGQSLLQSAHG*GSRCLPAVSDG
Trigger: CCCATCAGACACTGCAGGAAGACATCGAGAACCTCATCCATGTGCAGATTGAAGCAATGATTGACCGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS TCA 72 bp CTCGATCAATTACCTCTTTCCAGACTGAGTAGTGGCTaGGAAAGCAGCCGATTTCACCCCTTGTTAGAGGCC +
Preference number: 6 (lower is better)
Translates to: LDQLPLSRLSSG*ESSRFHPLLEA
Trigger: GGCCTCTAACAAGGGGTGAAATCGGCTGCTTTCTCAGCCACTACTCAGTCTGGAAAGAGGTAATTGATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
ENST00000649786.1
CDS TCA 72 bp AAGGGCAGACCTGGTAATCTCTGCAGCGTTGGCCATTaGTCAGTGCCTGCGGAAGCAATTGACAATCATATC +
Preference number: 6 (lower is better)
Translates to: KGRPGNLCSVGH*SVPAEAIDNHI
Trigger: GATATGATTGTCAATTGCTTCCGCAGGCACTGATCAATGGCCAACGCTGCAGAGATTACCAGGTCTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS GCA 72 bp AGCCATAGTGCTCTCTGTTGCAGAGGTACATCTGGATaGCTGAGGATCCAAGAGAGGGACAAAGCCAACAAT +
Preference number: 6 (lower is better)
Translates to: SHSALCCRGTSG*LRIQERDKANN
Trigger: ATTGTTGGCTTTGTCCCTCTCTTGGATCCTCAGGCATCCAGATGTACCTCTGCAACAGAGAGCACTATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS CAA 72 bp TCATCACATGGGCAAACCGGGAGGTTGGCCAGTGCTTaGGTCCAATTTCATCAGGGTAAGACTCTGGTTCAT +
Preference number: 6 (lower is better)
Translates to: SSHGQTGRLASA*VQFHQGKTLVH
Trigger: ATGAACCAGAGTCTTACCCTGATGAAATTGGACCAAAGCACTGGCCAACCTCCCGGTTTGCCCATGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361927.9
ENST00000649786.1
CDS CAA 90 bp GACCAGGTTTGCCACATTGGGCACTGCTTTCTCTGGCTCCTTTACTaGCATCCTCTTCCTACCAATATAAATCAGTTCCCAGTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: DQVCHIGHCFLWLLY*HPLPTNINQFPVQL
Trigger: CAGCTGGACTGGGAACTGATTTATATTGGTAGGAAGAGGATGCAAGTAAAGGAGCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
ENST00000649786.1
CDS TCA 72 bp ATAGTGCTCTCTGTTGCAGAGGTACATCTGGATGCCTaGGGATCCAAGAGAGGGACAAAGCCAACAATCAGA +
Preference number: 6 (lower is better)
Translates to: IVLSVAEVHLDA*GSKRGTKPTIR
Trigger: TCTGATTGTTGGCTTTGTCCCTCTCTTGGATCCTCAGGCATCCAGATGTACCTCTGCAACAGAGAGCACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS GCA 72 bp GGTTCCATTGGAGGACGGTCAATCATTGCTTCAATCTaGACATGGATGAGGTTCTCGATGTCTTCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: GSIGGRSIIASI*TWMRFSMSSCS
Trigger: ACTGCAGGAAGACATCGAGAACCTCATCCATGTGCAGATTGAAGCAATGATTGACCGTCCTCCAATGGAACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS GCA 72 bp GACCTGGTAATCTCTGCAGCGTTGGCCATTGATCAGTaGCTGCGGAAGCAATTGACAATCATATCTTTGAGC +
Preference number: 6 (lower is better)
Translates to: DLVISAALAIDQ*LRKQLTIISLS
Trigger: GCTCAAAGATATGATTGTCAATTGCTTCCGCAGGCACTGATCAATGGCCAACGCTGCAGAGATTACCAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS CCA 72 bp ATGCTTGTTGTACATGACTGGCAGAAACTCATCCACTaGCAGCATCTTCCCAAAAGGATTGGCTCCAACCAG +
Preference number: 6 (lower is better)
Translates to: MLVVHDWQKLIH*QHLPKRIGSNQ
Trigger: CTGGTTGGAGCCAATCCTTTTGGGAAGATGCTGCCAGTGGATGAGTTTCTGCCAGTCATGTACAACAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
ENST00000649786.1
CDS CAA 72 bp CAGCAGAGCTGCCCTGACAGTCCTCCTCTGCCCATTTaGTTCATCTCTGAAATAAAACCATCCTGTTTGGCA +
Preference number: 6 (lower is better)
Translates to: QQSCPDSPPLPI*FISEIKPSCLA
Trigger: TGCCAAACAGGATGGTTTTATTTCAGAGATGAACAAAATGGGCAGAGGAGGACTGTCAGGGCAGCTCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS TCA 72 bp ATCAAATCCCATCTTGTCTGGATATTTAGGGACAACTaGGACATACTGGGAGGGTTCCATTGGAGGACGGTC +
Preference number: 6 (lower is better)
Translates to: IKSHLVWIFRDN*DILGGFHWRTV
Trigger: GACCGTCCTCCAATGGAACCCTCCCAGTATGTCTCAGTTGTCCCTAAATATCCAGACAAGATGGGATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS CCA 72 bp CTTGTGTTGAGTGCCCTGCATCACATAAAACACGTCTaGAGATTAACAAGTCAAAGGTCCCCACCACAAAGG +
Preference number: 6 (lower is better)
Translates to: LVLSALHHIKHV*RLTSQRSPPQR
Trigger: CCTTTGTGGTGGGGACCTTTGACTTGTTAATCTCCAGACGTGTTTTATGTGATGCAGGGCACTCAACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS TCA 72 bp AACATACTGCTGAGTGACAAGCGAGGAGAAGGAACCTaGACTGTGTCTGATGCTGAGTTTGACACTGCAATT +
Preference number: 6 (lower is better)
Translates to: NILLSDKRGEGT*TVSDAEFDTAI
Trigger: AATTGCAGTGTCAAACTCAGCATCAGACACAGTTCAGGTTCCTTCTCCTCGCTTGTCACTCAGCAGTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS CCA 72 bp ATCTTGTCTGGATATTTAGGGACAACTGAGACATACTaGGAGGGTTCCATTGGAGGACGGTCAATCATTGCT +
Preference number: 6 (lower is better)
Translates to: ILSGYLGTTETY*EGSIGGRSIIA
Trigger: AGCAATGATTGACCGTCCTCCAATGGAACCCTCCCAGTATGTCTCAGTTGTCCCTAAATATCCAGACAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000649786.1
CDS CAA 72 bp TGCCACATTGGGCACTGCTTTCTCTGGCTCCTTTACTaGCATCCTCTTCCTACCAATATAAATCAGTTCCCA +
Preference number: 6 (lower is better)
Translates to: CHIGHCFLWLLY*HPLPTNINQFP
Trigger: TGGGAACTGATTTATATTGGTAGGAAGAGGATGCAAGTAAAGGAGCCAGAGAAAGCAGTGCCCAATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361927.9
ENST00000367520.3
ENST00000367521.5
ENST00000649786.1
CDS CAA 72 bp AGCATTTCAATATTCAGTGCCTTCAGCTGGCTTGTGTaGAGTGCCCTGCATCACATAAAACACGTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: SISIFSAFSWLV*SALHHIKHVWR
Trigger: TCTCCAGACGTGTTTTATGTGATGCAGGGCACTCAACACAAGCCAGCTGAAGGCACTGAATATTGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS TCA 72 bp CACAGTATCTCAGTATCTTTTGATGAACGGATAGGCTaGCCTGTAGCACAAAATGCAAGATGGACACCTCCA +
Preference number: 6 (lower is better)
Translates to: HSISVSFDERIG*PVAQNARWTPP
Trigger: TGGAGGTGTCCATCTTGCATTTTGTGCTACAGGTCAGCCTATCCGTTCATCAAAAGATACTGAGATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486375.2
CDS GCA 72 bp TTCAATATTCAGTGCCTTCAGCTGGCTTGTGTTGAGTaGCCTGCATCACATAAAACACGTCTGGAGATTAAC +
Preference number: 6 (lower is better)
Translates to: FNIQCLQLACVE*PASHKTRLEIN
Trigger: GTTAATCTCCAGACGTGTTTTATGTGATGCAGGGCACTCAACACAAGCCAGCTGAAGGCACTGAATATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS CCA 72 bp AAGGGAGGCAAGGAATTCCCATTCTGGAGAGCAGAATaGAACACTGTAATCCACCTACAGGAAATAACAAGA +
Preference number: 6 (lower is better)
Translates to: KGGKEFPFWRAE*NTVIHLQEITR
Trigger: TCTTGTTATTTCCTGTAGGTGGATTACAGTGTTCCATTCTGCTCTCCAGAATGGGAATTCCTTGCCTCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367520.3
CDS GCA 72 bp CTGACTCAGAGTTCATTTTCTGTGAACAGCACTATCTaGAGGTCATTTGTCAAAACCCATGAGCAACAACTG +
Preference number: 6 (lower is better)
Translates to: LTQSSFSVNSTI*RSFVKTHEQQL
Trigger: CAGTTGTTGCTCATGGGTTTTGACAAATGACCTGCAGATAGTGCTGTTCACAGAAAATGAACTCTGAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367521.5
CDS CAA 72 bp GAGGAGAAGGAACCTGAACTGTGTCTGATGCTGAGTTaGACACTGCAATTAAATAAGTGGTTGTTTCAGGTA +
Preference number: 6 (lower is better)
Translates to: EEKEPELCLMLS*TLQLNKWLFQV
Trigger: TACCTGAAACAACCACTTATTTAATTGCAGTGTCAAACTCAGCATCAGACACAGTTCAGGTTCCTTCTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367520.3