RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COLGALT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130309

Ensembl transcript IDs: ENST00000252599.9, ENST00000593832.1, ENST00000597075.1, ENST00000597147.1, ENST00000600474.1, ENST00000601354.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGTaGGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAG +
Preference number: 1 (lower is better)
Translates to: VLAPGGGRATLPLGW*GDVVCTQLRRPRVQ
Trigger: CTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCCCACCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR CCA 90 bp CTGCCAAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTaGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCTGGCTGCTAC +
Preference number: 1 (lower is better)
Translates to: LPRGPEVDLMSSVST*SLGHRWLLWLSGCY
Trigger: GTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR CCA 90 bp CTTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTaGCCTGCCAAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAG +
Preference number: 1 (lower is better)
Translates to: LSKSWLDTTPHESPL*PAKGSRGGPDVLSK
Trigger: CTTACTGAGGACATCAGGTCCACCTCTGGACCCCTTGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR GCA 90 bp GCTTGGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTGGCATaGAGTAGGCACTCCATTAATGCTGCCTGTGTGCACGTGATTGCT +
Preference number: 1 (lower is better)
Translates to: AWFLPIPQGQALLLA*SRHSINAACVHVIA
Trigger: AGCAATCACGTGCACACAGGCAGCATTAATGGAGTGCCTACTGCATGCCAGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR CCA 90 bp CAGGTGCTTAATAAATGCTGGGCACATGAACAGATGAAGAGGGCTTaGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTGGCATGC +
Preference number: 1 (lower is better)
Translates to: QVLNKCWAHEQMKRA*FLPIPQGQALLLAC
Trigger: GCATGCCAGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGTTCATGTGCCCAGCATTTATTAAGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR GCA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGCATAGCTCAGCTCCCTaGACACAGCAGGTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWHSSAP*TQQVLS
Trigger: ACTGAGCACCTGCTGTGTGCAGGGAGCTGAGCTATG...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCATCCTCAGTAAGCACGTaGAGCCTGGGCCACCGATGG +
Preference number: 2 (lower is better)
Translates to: LARAGWTPPHTRALCGLPSSVST*SLGHRW
Trigger: CCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGA...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CCA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGTCCCAGAGCCTGGAATaGCACCCAACACACAGTAGG +
Preference number: 2 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWSQSLE*HPTHSR
Trigger: CCTACTGTGTGTTGGGTGCCATTCCAGGCTCTGGGA...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGATTCTTCAACCCAACTaGGAGTCTGTGAGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGILQPN*ESVRPG
Trigger: GCCAGGCCTCACAGACTCCCAGTTGGGTTGAAGAAT...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR GCA 90 bp GAAGTGAAGGAACCGATCTTGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGCGAGCCCTCTGTGGCCTaGCAAGGGGTCCAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: EVKEPILFISVPQHSACSEPSVA*QGVQRW
Trigger: CCACCTCTGGACCCCTTGGCAGGCCACAGAGGGCTC...GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR GCA 90 bp ACAGATGAAGAGGGCTTGGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTCTGTGTGCACGTGATTaGTTAGCAAGAGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: TDEEGLVPPNSPGPSPVALCARD*LARAGW
Trigger: CCAGCCAGCTCTTGCTAAGCAATCACGTGCACACAG...AGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAACACCGATGGCTGCTTTaGCTTTCTGGCTGCTACCCC +
Preference number: 2 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKHRWLL*LSGCYP
Trigger: GGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTG...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR GCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAACCGAGAAACAAGAATTaGTGGACGCTGGGAGGCGCA +
Preference number: 2 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKPRNKN*WTLGGA
Trigger: TGCGCCTCCCAGCGTCCAGCAATTCTTGTTTCTCGG...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGGTAACCCTAGCACTTTaGGTGGCCAAGGCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: VTLFCITSARHTVSALQVVTLAL*VAKAGR
Trigger: TCTGCCCGCCTTGGCCACCCAAAGTGCTAGGGTTAC...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGAATATTCCCAGAGCCTaGGCTGGGCACAGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: VTLFCITSARHTVSALQVNIPRA*AGHSGS
Trigger: TGAGCCACTGTGCCCAGCCCAGGCTCTGGGAATATT...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR TCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAAAGGAACTTATCTTTGTaGCATGAGTGCCAGGCACAC +
Preference number: 2 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKRNLSL*HECQAH
Trigger: GTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCT...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR GCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGCCTGCACACAGCAGGTaGTCAGTAAGTGTACCGAAT +
Preference number: 2 (lower is better)
Translates to: VTLFCITSARHTVSALQVPAHSR*SVSVPN
Trigger: ATTCGGTACACTTACTGAGCACCTGCTGTGTGCAGG...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR TCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGAAAGAAGCCAATGAGTaGGAAGTTCCCACACCGTCT +
Preference number: 2 (lower is better)
Translates to: VTLFCITSARHTVSALQVKEANE*EVPTPS
Trigger: AGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTT...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR GCA 90 bp AAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCACACAGTAAGGGCCAAGCCCTGTTaGTGGCATGCAGTAGGCACT +
Preference number: 2 (lower is better)
Translates to: KCTESGTYLCDMSARHTVRAKPC*WHAVGT
Trigger: AGTGCCTACTGCATGCCAGCAACAGGGCTTGGCCCT...TACTGTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR TCA 90 bp AAAGTACCTTGTTTACTCCCATTCCCATCCCATAGCTCAGCTCCCTGCACACAGAAAACTAGCCAGATGTaGTGGCACGCACCTATAGTC +
Preference number: 2 (lower is better)
Translates to: KVPCLLPFPSHSSAPCTQKTSQM*WHAPIV
Trigger: GACTATAGGTGCGTGCCATCACATCTGGCTAGTTTT...CTGTGTGCAGGGAGCTGAGCTATGGGATGGGAATGGGAGTAAACAAGGTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR GCA 90 bp GAAGTGAAGGAACCGATCTTGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGCGTAACATGGGAACCTTaGATACAGCAGGTGCTTAAT +
Preference number: 2 (lower is better)
Translates to: EVKEPILFISVPQHSACSVTWEP*IQQVLN
Trigger: ATTAAGCACCTGCTGTATGCAAGGTTCCCATGTTAC...GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR CCA 72 bp ATGTGGCGTGGGGCCACCAGGACCTGTGCTTGCCCCTaGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGTG +
Preference number: 3 (lower is better)
Translates to: MWRGATRTCACP*WRKSYPPSWVV
Trigger: CACCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGGCCCCACGCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR GCA 72 bp GCTAACATGTGGCGTGGGGCCACCAGGACCTGTGCTTaGCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: ANMWRGATRTCA*PWWRKSYPPSW
Trigger: CCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGGCCCCACGCCACATGTTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR CCA 72 bp AGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTaGCCTGCCAAGGGGTCCAGAGGTGGACCTGATGTC +
Preference number: 3 (lower is better)
Translates to: SWLDTTPHESPL*PAKGSRGGPDV
Trigger: GACATCAGGTCCACCTCTGGACCCCTTGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CAA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGGCCGAGAAACAAGAATaGCTGGACGCTGGGAGGCGC +
Preference number: 3 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWAEKQE*LDAGRR
Trigger: GCGCCTCCCAGCGTCCAGCAATTCTTGTTTCTCGGC...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR CCA 72 bp CCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGTaGGGGGATGTTGTCTGCACACAGCTCAGACGACCG +
Preference number: 3 (lower is better)
Translates to: PGGGRATLPLGW*GDVVCTQLRRP
Trigger: CGGTCGTCTGAGCTGTGTGCAGACAACATCCCCCCACCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR CCA 72 bp GGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTaGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCT +
Preference number: 3 (lower is better)
Translates to: GPEVDLMSSVST*SLGHRWLLWLS
Trigger: AGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR CCA 72 bp TACTTGGGAGGCCGAGAAACAAGAATTGCTGGACGCTaGGAGGCGCAGGCTGCAGTGAGCCGTCACACCACT +
Preference number: 3 (lower is better)
Translates to: YLGGRETRIAGR*EAQAAVSRHTT
Trigger: AGTGGTGTGACGGCTCACTGCAGCCTGCGCCTCCCAGCGTCCAGCAATTCTTGTTTCTCGGCCTCCCAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CAA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGCTGATCAGTAACTGCTaGATGACTGAATCAATCGCT +
Preference number: 3 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGLISNC*MTESIA
Trigger: AGCGATTGATTCAGTCATCAAGCAGTTACTGATCAG...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CAA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGGTGCTCAATAAACACTaGTGGCATGAAGAAGTGAAG +
Preference number: 3 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGVLNKH*WHEEVK
Trigger: CTTCACTTCTTCATGCCACAAGTGTTTATTGAGCAC...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR TCA 72 bp GCAGTAGGCACTCCATTAATGCTGCCTGTGTGCACGTaGTTGCTTAGCAAGAGCTGGCTGGACACCACCCCA +
Preference number: 3 (lower is better)
Translates to: AVGTPLMLPVCT*LLSKSWLDTTP
Trigger: TGGGGTGGTGTCCAGCCAGCTCTTGCTAAGCAATCACGTGCACACAGGCAGCATTAATGGAGTGCCTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR GCA 72 bp TGTTTACTCCCATTCCCATCCCATAGCTCAGCTCCCTaGACACAGCAGGTGCTCAGTAAGTGTACCGAATCA +
Preference number: 3 (lower is better)
Translates to: CLLPFPSHSSAP*TQQVLSKCTES
Trigger: TGATTCGGTACACTTACTGAGCACCTGCTGTGTGCAGGGAGCTGAGCTATGGGATGGGAATGGGAGTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR TCA 72 bp AGTGCTCTTCAGGTGTGTGGGAAAGAAGCCAATGAGTaGGAAGTTCCCACACCGTCTAGCAGTGAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: SALQVCGKEANE*EVPTPSSSEEK
Trigger: TTTTTCCTCACTGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAAGAGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CAA 90 bp AAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCACACAGTATATAGTCCCAGCTACTaGGGAGGCCGAGAAACAAGA +
Preference number: 3 (lower is better)
Translates to: KCTESGTYLCDMSARHTVYSPSY*GGRETR
Trigger: TCTTGTTTCTCGGCCTCCCAAGTAGCTGGGACTATA...TACTGTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR-3UTR CAA 90 bp TTCAGGTGTGTGGGAAAGAAGCCAATGAGTGAGAAGTTCCCACACCGTCTAGCAAAAGTAAAAAGTACCTaGTTTACTCCCATTCCCATC +
Preference number: 3 (lower is better)
Translates to: FRCVGKKPMSEKFPHRLAKVKST*FTPIPI
Trigger: GATGGGAATGGGAGTAAACAAGGTACTTTTTACTTT...TGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCACCAGCTCACCCTTGGTaGGGGGCCGGCCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPPAHPW*GAGRGR
Trigger: CCTACCACGGCCGGCCCCTCACCAAGGGTGAGCTGG...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGGAAGCGGGAGGGCTCTaGGGGCGGGTGCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWEAGGL*GRVLHH
Trigger: ATGGTGAAGCACCCGCCCGCAGAGCCCTCCCGCTTC...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCACGCTCCCGCCGGTCCTaGCGCCGCCTCAGGTTGATC +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPRSRRS*RRLRLI
Trigger: GATCAACCTGAGGCGGCGGCAGGACCGGCGGGAGCG...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGGGCCACCAGGACCTGTaGTTGCCCCTGGTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWGHQDL*LPLVAE
Trigger: TTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGGCC...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTCGAGTGCGCCCAGCGTaGTGGGCAACGCGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLRVRPA*WATRGP
Trigger: CGGCCCACGCGTTGCCCACCACGCTGGGCGCACTCG...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGGCACTCGATCTCCTGTaGCTGCAGCGCCCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWALDLL*LQRPQH
Trigger: ATGCTGCGGGCGCTGCAGGCACAGGAGATCGAGTGC...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTCTGCGGGAGGACTCTaGCCGCGCCTTAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGSAGGL*PRLKGV
Trigger: GACCCCTTTAAGGCGCGGCCAGAGTCCTCCCGCAGA...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGGGCAGCACTGTCCAGTaGGGACTGGAGCACGTCCGA +
Preference number: 4 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWGSTVQ*GLEHVR
Trigger: TCGGACGTGCTCCAGTCCCCACTGGACAGTGCTGCC...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp ACAGATGAAGAGGGCTTGGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTCCACCCATAGCGCCGTaGGCTCCCGCGGGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: TDEEGLVPPNSPGPSPVAPPIAP*APAGAA
Trigger: TGCGGCACCCGCGGGAGCGCACGGCGCTATGGGTGG...AGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCATCGATCTCCTGTGCCTaGAGCGCCCGCAGCATGCGC +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPSISCA*SARSMR
Trigger: GCGCATGCTGCGGGCGCTGCAGGCACAGGAGATCGA...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACTCTCGGCCTCATCCTaGAGGGTGCTGTGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPLSASS*RVLWAR
Trigger: GCGCGCCCACAGCACCCTCCAGGATGAGGCCGAGAG...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTAGGCGCAGGCTGCAGTaGGCCGTCACACCACTGCAC +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLRRRLQ*AVTPLH
Trigger: GTGCAGTGGTGTGACGGCTCACTGCAGCCTGCGCCT...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTTATCCCCAAGAGGGTaGAGCACCGCTGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGLSPRG*STAGWF
Trigger: GAACCAGCCAGCGGTGCTTCACCCTCTTGGGGATAA...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCGGACCTGGGCTCCTCTaGTGGCCGCCACTCCACGGA +
Preference number: 4 (lower is better)
Translates to: DVLSKHVEPGPPMAALAFGPGLL*WPPLHG
Trigger: TCCGTGGAGTGGCGGCCAGCAGAGGAGCCCAGGTCC...GAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGGGATGTAGGCAGGTGTaGGCTTGTAGTAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWGCRQV*ACSSPG
Trigger: CCCAGGGCTACTACAAGCGCACACCTGCCTACATCC...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCAGGCCTCACGGCTCAGTaGCTGCTGCTCCCGCATCTT +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPGLTAQ*LLLPHL
Trigger: AAGATGCGGGAGCAGCAGGCACTGAGCCGTGAGGCC...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCGTGGTGGGCAACGCGTaGGCCGCGTTTCGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: DVLSKHVEPGPPMAALAFVVGNA*AAFRAN
Trigger: GTTGGCGCGAAACGCGGCCCACGCGTTGCCCACCAC...GAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCTGGGCTCCTCTGCTaGCCGCCACTCCACGGAATG +
Preference number: 4 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPPGLLC*PPLHGM
Trigger: CATTCCGTGGAGTGGCGGCCAGCAGAGGAGCCCAGG...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGGGCGCGCAATGGCACTaGCAAGAATCCGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGGAQWH*QESVLL
Trigger: GAGGAGTACGGATTCTTGCCAGTGCCATTGCGCGCC...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTCCTGGAGGGTGCTGTaGGCGCGCAATGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLSWRVL*ARNGTG
Trigger: GCCAGTGCCATTGCGCGCCCACAGCACCCTCCAGGA...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GAAGTGAAGGAACCGATCTTGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGCGCGCCAACAGCGCGATaGGCACGCGCGGCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EVKEPILFISVPQHSACSAPTAR*ARAAPA
Trigger: TGCAGGCGCCGCGCGTGCTCATCGCGCTGTTGGCGC...GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGGACATGCTCGTAGCGTaGGTCAGACCAGTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGDMLVA*VRPVFR
Trigger: CCGAAACACTGGTCTGACTCACGCTACGAGCATGTC...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTACCAGGACCTGTGCTTaGCCCTGGTGGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLTRTCA*PWWRKS
Trigger: GCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGT...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAAGTGCGCCCAGCGTGGTaGGCAACGCGTGGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKVRPAW*ATRGPR
Trigger: ACGCGGCCCACGCGTTGCCCACCACGCTGGGCGCAC...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTGCTTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTAGAAGGCCAGGTTCCTaGACGCCGCCTTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLSKSWLDTTPHESPLWPRRPGS*TPPSAG
Trigger: ACCTGCGGAAGGCGGCGTCCAGGAACCTGGCCTTCT...AGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCACCTGGCTGGTGTTCATaGCTTTGCCGTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPPGWCS*LCRPRP
Trigger: AGGCCGTGGACGGCAAAGCCATGAACACCAGCCAGG...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGTGCTTGCCCCTGGTaGCGGAAGAGCTACCCTCCC +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLCACPW*RKSYPP
Trigger: GGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACA...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCAACCTGTGCTTGCCCCTaGTGGCGGAAGAGCTACCCT +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPTCACP*WRKSYP
Trigger: AGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGT...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGGGTCCCAGTCGGTCTTaGCGTGCTCATTGTTCCATA +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGGPSRS*RAHCSI
Trigger: TATGGAACAATGAGCACGTCAAGACCGACTGGGACC...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAACCGCAGCCGCTCGAGTaGGCCCAGCGTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKPQPLE*AQRGGQ
Trigger: TTGCCCACCACGCTGGGCGCACTCGAGCGGCTGCGG...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCAAACACAAGCGATTTCTaGAGCCCCCGGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPNTSDF*SPRSTT
Trigger: GGTGGTGGACCGGGGGCTGCAGAAATCGCTTGTGTT...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTAGCCTGGGCCACCGATaGCTGCTTTGGCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLSLGHR*LLWLSG
Trigger: GCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCT...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCACTCCCTCTTGGGTGGTaGGGGGATGTTGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPLPLGW*GDVVCT
Trigger: TGTGCAGACAACATCCCCCCACCACCCAAGAGGGAG...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GAAGTGAAGGAACCGATCTTGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGCACAGGGGACCGGGAGTaGGCCAGGGACACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: EVKEPILFISVPQHSACSTGDRE*ARDTQP
Trigger: GGGCTGGGTGTCCCTGGCCCACTCCCGGTCCCCTGT...GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGGAAAGAAGCCAATaGGTGAGAAGTTCCCACACC +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGWERSQ*VRSSHT
Trigger: GGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCA...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGATACATCTGAACCTCTaGCTGCTTGCAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGIHLNL*LLAGEG
Trigger: GCCTTCTCCTGCAAGCAGGCAGAGGTTCAGATGTAT...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCAAGGGCCAAGCCCTGTTaGTGGCATGCAGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPRAKPC*WHAVGT
Trigger: AGTGCCTACTGCATGCCAGCAACAGGGCTTGGCCCT...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCAGTAGTCAGGGTGAGGTaGGTAGAAGGCCAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPVVRVR*VEGQVP
Trigger: AGGAACCTGGCCTTCTACCCACCTCACCCTGACTAC...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTCACCGATGGCTGCTTTaGCTTTCTGGCTGCTACCCC +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLHRWLL*LSGCYP
Trigger: GGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTG...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCATCCCAGAGCCTGGAATaGCACCCAACACACAGTAGG +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPSQSLE*HPTHSR
Trigger: CCTACTGTGTGTTGGGTGCCATTCCAGGCTCTGGGA...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTGCTCCACATCCCGCATaGGGTTCATCAGACGTCTCT +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLAPHPA*GSSDVS
Trigger: AGAGACGTCTGATGAACCTCATGCGGGATGTGGAGC...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGAAAGAAGCCAATGAGTaGGAAGTTCCCACACCGTCT +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGKEANE*EVPTPS
Trigger: AGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTT...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp TTGCTTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTTCCACAGAGAAGGCATaGAGGTTGCGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLSKSWLDTTPHESPLWPSTEKA*RLRREK
Trigger: CTTCTCCCTCCGCAACCTGCATGCCTTCTCTGTGGA...AGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp ACAGATGAAGAGGGCTTGGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTTCACGGCTCAGTGCCTaGTGCTCCCGCATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TDEEGLVPPNSPGPSPVASRLSA*CSRIFW
Trigger: CCAGAAGATGCGGGAGCAGCAGGCACTGAGCCGTGA...AGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp AAAGTACCTTGTTTACTCCCATTCCCATCCCATAGCTCAGCTCCCTGCACACAGCGTCCGGGTAGGACCTaGGCTCCTCTGCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KVPCLLPFPSHSSAPCTQRPGRT*APLLAA
Trigger: GGCGGCCAGCAGAGGAGCCCAGGTCCTACCCGGACG...CTGTGTGCAGGGAGCTGAGCTATGGGATGGGAATGGGAGTAAACAAGGTACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTGCTTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTAATATTCCCAGAGCCTaGGCTGGGCACAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLSKSWLDTTPHESPLWPNIPRA*AGHSGS
Trigger: TGAGCCACTGTGCCCAGCCCAGGCTCTGGGAATATT...AGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAACCAACTGGGAGTCTGTaGGGCCTGGCACACAGGTGC +
Preference number: 4 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKPTGSL*GLAHRC
Trigger: GCACCTGTGTGCCAGGCCTCACAGACTCCCAGTTGG...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp TTGCTTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTTTTAAGTCGTTTTTCTaGGGGAGGACTCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LLSKSWLDTTPHESPLWPFKSFF*GRTLAA
Trigger: CGCGGCCAGAGTCCTCCCGCAGAAAAACGACTTAAA...AGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCAGAACCTCTGCCTGCTTaGAGGAGAAGGCAAAGACGA +
Preference number: 4 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPEPLPA*RRRQRR
Trigger: TCGTCTTTGCCTTCTCCTGCAAGCAGGCAGAGGTTC...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAACGGCTCAGTGCCTGCTaGTCCCGCATCTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKRLSAC*SRIFWD
Trigger: GTCCCAGAAGATGCGGGAGCAGCAGGCACTGAGCCG...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGGAGCCCTCTGTGGCCTaGCAAGGGGTCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTLFCITSARHTVSALQVEPSVA*QGVQRW
Trigger: CCACCTCTGGACCCCTTGGCAGGCCACAGAGGGCTC...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGAGGGAACAATTATaGCTCATTCACTGCCGTAAC +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGWREQL*LIHCRN
Trigger: GTTACGGCAGTGAATGAGGCATAATTGTTCCCTCCA...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGCTGGGAGGCGCAGGCTaGAGTGAGCCGTCACACCAC +
Preference number: 4 (lower is better)
Translates to: VTLFCITSARHTVSALQVLGGAG*SEPSHH
Trigger: GTGGTGTGACGGCTCACTGCAGCCTGCGCCTCCCAG...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTGATTTCAGGGCTGCCTaGCGCAACTTCATGACATGC +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLDFRAA*RNFMTC
Trigger: GCATGTCATGAAGTTGCGCCAGGCAGCCCTGAAATC...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTTCCACACCAGAAGTTaGAGTACGCAGCCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLFHTRS*STQPGN
Trigger: ATTCCCGGGCTGCGTACTCCAACTTCTGGTGTGGAA...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCTTGCGGAGGGAGAAGTaGGCCTTGTACTCGGACACT +
Preference number: 4 (lower is better)
Translates to: DVLSKHVEPGPPMAALAFLRREK*ALYSDT
Trigger: AGTGTCCGAGTACAAGGCCCACTTCTCCCTCCGCAA...GAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCAGCTGCTTTGGCTTTCTaGCTGCTACCCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPAALAF*LLPLRV
Trigger: AACTCTGAGGGGTAGCAGCCAGAAAGCCAAAGCAGC...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp ACAGATGAAGAGGGCTTGGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTGTAACCCTAGCACTTTaGGTGGCCAAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TDEEGLVPPNSPGPSPVAVTLAL*VAKAGR
Trigger: TCTGCCCGCCTTGGCCACCCAAAGTGCTAGGGTTAC...AGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTATTCTTCAACCCAACTaGGAGTCTGTGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLILQPN*ESVRPG
Trigger: GCCAGGCCTCACAGACTCCCAGTTGGGTTGAAGAAT...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCAAGGGTGAAGCACCGCTaGCTGGTTCTGACATTCGAT +
Preference number: 4 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPRVKHR*LVLTFD
Trigger: ATCGAATGTCAGAACCAGCCAGCGGTGCTTCACCCT...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAACCACATGTCTCGAGCTaGTTTCAGGGCTGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKPHVSS*FQGCLA
Trigger: CGCCAGGCAGCCCTGAAATCAGCTCGAGACATGTGG...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCAATTGTTCCATACGACTaGGGTCTCGGTGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPIVPYD*GLGVTH
Trigger: GTGAGTGACACCGAGACCTCAGTCGTATGGAACAAT...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAAACAGCCTTCTCGGGGTaGTCCACCTGCATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKTAFSG*STCIRF
Trigger: GAAGCGGATGCAGGTGGAGCACCCCGAGAAGGCTGT...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGCAGCAGCCAGCAGTTTaGGGGCGCCTTGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VTLFCITSARHTVSALQVQQPAV*GRLAGR
Trigger: TCTCCCTGCAAGGCGCCCGCAAACTGCTGGCTGCTG...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp ACAGATGAAGAGGGCTTGGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTCGCCACTCCACGGAATaGTACAAACTCTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: TDEEGLVPPNSPGPSPVARHSTE*YKLFTA
Trigger: GGCCGTGAAGAGTTTGTACCATTCCGTGGAGTGGCG...AGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GAAGTGAAGGAACCGATCTTGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGCCCCAGCGCCTCCACCTaGCTGGTGTTCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: EVKEPILFISVPQHSACSPSAST*LVFMAL
Trigger: CAAAGCCATGAACACCAGCCAGGTGGAGGCGCTGGG...GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCAATAGTCCCAGCTACTTaGGAGGCCGAGAAACAAGAA +
Preference number: 4 (lower is better)
Translates to: LARAGWTPPHTRALCGLPIVPAT*EAEKQE
Trigger: TTCTTGTTTCTCGGCCTCCCAAGTAGCTGGGACTAT...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCTTGCACACATACATCTaGACCTCTGCCTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: DVLSKHVEPGPPMAALAFLHTYI*TSACLQ
Trigger: CTGCAAGCAGGCAGAGGTTCAGATGTATGTGTGCAA...GAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp ACAGATGAAGAGGGCTTGGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTACCGCTGGCTGGTTCTaGCATTCGATTCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: TDEEGLVPPNSPGPSPVATAGWF*HSIQAE
Trigger: TTCAGCCTGAATCGAATGTCAGAACCAGCCAGCGGT...AGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp ACAGATGAAGAGGGCTTGGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTACCATGACCTCCAGCTaGACATGCATGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TDEEGLVPPNSPGPSPVATMTSS*TCMKLS
Trigger: CGAGAGCTTCATGCATGTGCAGCTGGAGGTCATGGT...AGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTCAGTCGGTCTTGACGTaGTCATTGTTCCATACGACT +
Preference number: 4 (lower is better)
Translates to: VDLMSSVSTWSLGHRWLLQSVLT*SLFHTT
Trigger: AGTCGTATGGAACAATGAGCACGTCAAGACCGACTG...AAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCGTGTTATCCATGTTGTaGTCCGTAGCCACCCATAGC +
Preference number: 4 (lower is better)
Translates to: DVLSKHVEPGPPMAALAFVLSML*SVATHS
Trigger: GCTATGGGTGGCTACGGACCACAACATGGATAACAC...GAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTCAGGTGTGTGGGAAAGAAGCCAATGAGTGAGAAGTTCCCACACCGTCTAGCACCCGGGAATCCAGCATaGGGGCGACCACCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FRCVGKKPMSEKFPHRLAPGNPA*GRPPSC
Trigger: ACAAGACGGTGGTCGCCCCCATGCTGGATTCCCGGG...TGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGGCGCCTCCACCTGGCTaGTGTTCATGGCTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: VTLFCITSARHTVSALQVAPPPG*CSWLCR
Trigger: ACGGCAAAGCCATGAACACCAGCCAGGTGGAGGCGC...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACTTGTACTCGGACACTaGGTGTTTGTCGAACATGAC +
Preference number: 4 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPLVLGH*VFVEHD
Trigger: GTCATGTTCGACAAACACCCAGTGTCCGAGTACAAG...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGGCACGTCCGAGTTCTTaGCCTCACGGCTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: VTLFCITSARHTVSALQVARPSS*PHGSVP
Trigger: AGGCACTGAGCCGTGAGGCCAAGAACTCGGACGTGC...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGGTGCTTAATAAATGCTaGGCACATGAACAGATGAAG +
Preference number: 4 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGVLNKC*AHEQMK
Trigger: CTTCATCTGTTCATGTGCCCAGCATTTATTAAGCAC...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp AAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCACACAGTATGGTGGGAGCCGAGATaGAGCGGGAGGGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: KCTESGTYLCDMSARHTVWWEPR*SGRALR
Trigger: CCGCAGAGCCCTCCCGCTTCATCTCGGCTCCCACCA...TACTGTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGTGGGCCACCGATGGCTaGTTTGGCTTTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTLFCITSARHTVSALQVWATDG*FGFLAA
Trigger: AGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCA...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGCTGTCCAGTGGGGACTaGAGCACGTCCGAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VTLFCITSARHTVSALQVLSSGD*STSEFL
Trigger: CAAGAACTCGGACGTGCTCCAGTCCCCACTGGACAG...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAATCAGTGTGTCAGGGTTaGGGATCAGGTTGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKSVCQG*GSGCPH
Trigger: ATGCGGACAACCTGATCCTCAACCCTGACACACTGA...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAATCTTGTTCTCAGCGATaGGCAGGCTCAGTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKSCSQR*AGSVCQ
Trigger: CTGACACACTGAGCCTGCTCATCGCTGAGAACAAGA...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp TTCAGGTGTGTGGGAAAGAAGCCAATGAGTGAGAAGTTCCCACACCGTCTAGCAAGTGTGTGGGGTAGATaGGCAGCGGCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: FRCVGKKPMSEKFPHRLASVWGR*AAAPQR
Trigger: TCTCTGTGGAGCCGCTGCTCATCTACCCCACACACT...TGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCCTCATCCTGGAGGGTaGTGTGGGCGCGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: VLSKCTESGTYLCDMSARPHPGG*CGRAMA
Trigger: TGCCATTGCGCGCCCACAGCACCCTCCAGGATGAGG...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp AAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCACACAGTATCGGGGTGCTCCACCTaGATCCGCTTCCGGCCCACA +
Preference number: 4 (lower is better)
Translates to: KCTESGTYLCDMSARHTVSGCST*IRFRPT
Trigger: TGTGGGCCGGAAGCGGATGCAGGTGGAGCACCCCGA...TACTGTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGAATCTGATCAGTAACTaGTTGATGACTGAATCAATC +
Preference number: 4 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWNLISN*LMTESI
Trigger: GATTGATTCAGTCATCAAGCAGTTACTGATCAGATT...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TTCAGGTGTGTGGGAAAGAAGCCAATGAGTGAGAAGTTCCCACACCGTCTAGCAAGGTCGAGTGCACCATaGGAACTGCAAAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FRCVGKKPMSEKFPHRLARSSAP*ELQSSP
Trigger: GGGGCTGCTTTGCAGTTCCCATGGTGCACTCGACCT...TGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGTGCTCCCGCATCTTCTaGGACTTGGCGCGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLSKCTESGTYLCDMSARCSRIF*DLARSQ
Trigger: CTGGGACCGCGCCAAGTCCCAGAAGATGCGGGAGCA...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCACGAGAGCCCTCTGTaGCCTGCCAAGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLSKCTESGTYLCDMSARHESPL*PAKGSR
Trigger: TCTGGACCCCTTGGCAGGCCACAGAGGGCTCTCGTG...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGGCGGGTGCTTCACCATaGCCTCCAGCTGCACATGCA +
Preference number: 4 (lower is better)
Translates to: VLSKCTESGTYLCDMSARAGASP*PPAAHA
Trigger: TGCATGTGCAGCTGGAGGTCATGGTGAAGCACCCGC...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp TTCAGGTGTGTGGGAAAGAAGCCAATGAGTGAGAAGTTCCCACACCGTCTAGCACTGCCTGTGTGCACGTaGTTGCTTAGCAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FRCVGKKPMSEKFPHRLALPVCT*LLSKSW
Trigger: CCAGCTCTTGCTAAGCAATCACGTGCACACAGGCAG...TGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GAAGTGAAGGAACCGATCTTGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGCATCAGGAAGGTCGAGTaGACCATGGGAACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: EVKEPILFISVPQHSACSIRKVE*TMGTAK
Trigger: CTTTGCAGTTCCCATGGTGCACTCGACCTTCCTGAT...GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp AAAGTACCTTGTTTACTCCCATTCCCATCCCATAGCTCAGCTCCCTGCACACAGACCTCCAGCTGCACATaGATGAAGCTCTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KVPCLLPFPSHSSAPCTQTSSCT*MKLSAS
Trigger: TGAGGCCGAGAGCTTCATGCATGTGCAGCTGGAGGT...CTGTGTGCAGGGAGCTGAGCTATGGGATGGGAATGGGAGTAAACAAGGTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCGTAACATGGGAACCTTaGATACAGCAGGTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: DVLSKHVEPGPPMAALAFVTWEP*IQQVLN
Trigger: ATTAAGCACCTGCTGTATGCAAGGTTCCCATGTTAC...GAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp AAAGTACCTTGTTTACTCCCATTCCCATCCCATAGCTCAGCTCCCTGCACACAGCCGAGAAACAAGAATTaGTGGACGCTGGGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KVPCLLPFPSHSSAPCTQPRNKN*WTLGGA
Trigger: TGCGCCTCCCAGCGTCCAGCAATTCTTGTTTCTCGG...CTGTGTGCAGGGAGCTGAGCTATGGGATGGGAATGGGAGTAAACAAGGTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp AAAGTACCTTGTTTACTCCCATTCCCATCCCATAGCTCAGCTCCCTGCACACAGCATAGCTCAGCTCCCTaGACACAGCAGGTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: KVPCLLPFPSHSSAPCTQHSSAP*TQQVLS
Trigger: ACTGAGCACCTGCTGTGTGCAGGGAGCTGAGCTATG...CTGTGTGCAGGGAGCTGAGCTATGGGATGGGAATGGGAGTAAACAAGGTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp TCAGACGACCGAGGGTACAGGAAGAATCAAACTCAGTCAACCATTCTTCAACCCGCTGTGGGCGCGCAATaGCACTGGCAAGAATCCGTA +
Preference number: 4 (lower is better)
Translates to: SDDRGYRKNQTQSTILQPAVGAQ*HWQESV
Trigger: TACGGATTCTTGCCAGTGCCATTGCGCGCCCACAGC...GGGTTGAAGAATGGTTGACTGAGTTTGATTCTTCCTGTACCCTCGGTCGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGGCATCTTCTGGGACTTaGCGCGGTCCCAGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: VLSKCTESGTYLCDMSARASSGT*RGPSRS
Trigger: AGACCGACTGGGACCGCGCCAAGTCCCAGAAGATGC...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGCAGATGAAGAGGGCTTaGTTCCTCCCAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VTLFCITSARHTVSALQVQMKRA*FLPIPQ
Trigger: CTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTG...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GAAGTGAAGGAACCGATCTTGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGCAAAACTAGCCAGATGTaGTGGCACGCACCTATAGTC +
Preference number: 4 (lower is better)
Translates to: EVKEPILFISVPQHSACSKTSQM*WHAPIV
Trigger: GACTATAGGTGCGTGCCATCACATCTGGCTAGTTTT...GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CCA 90 bp AAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCACACAGTATCCTCAGTAAGCACGTaGAGCCTGGGCCACCGATGG +
Preference number: 4 (lower is better)
Translates to: KCTESGTYLCDMSARHTVSSVST*SLGHRW
Trigger: CCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGA...TACTGTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCCTGGCGCAACTTCATaGCATGCTCGTAGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: VLSKCTESGTYLCDMSARPGATS*HARSVS
Trigger: ACTCACGCTACGAGCATGTCATGAAGTTGCGCCAGG...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp AAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCACACAGTAGCACTCCAGCCTGGGTaGCAGAGACAGACTCTACTC +
Preference number: 4 (lower is better)
Translates to: KCTESGTYLCDMSARHTVALQPG*QRQTLL
Trigger: GAGTAGAGTCTGTCTCTGTCACCCAGGCTGGAGTGC...TACTGTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp TCAGACGACCGAGGGTACAGGAAGAATCAAACTCAGTCAACCATTCTTCAACCCCTGTGTGCACGTGATTaGTTAGCAAGAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SDDRGYRKNQTQSTILQPLCARD*LARAGW
Trigger: CCAGCCAGCTCTTGCTAAGCAATCACGTGCACACAG...GGGTTGAAGAATGGTTGACTGAGTTTGATTCTTCCTGTACCCTCGGTCGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCCGGCACACAGTCAGTaGTCTTCAGGTGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VLSKCTESGTYLCDMSARPAHSQ*SSGVWE
Trigger: TTCCCACACACCTGAAGAGCACTGACTGTGTGCCGG...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
3UTR CAA 72 bp AAACACTTGTGGCATGAAGAAGTGAAGGAACCGATCTaGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGC +
Preference number: 4 (lower is better)
Translates to: KHLWHEEVKEPI*FISVPQHSACS
Trigger: GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTCTTCATGCCACAAGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp TTCAGGTGTGTGGGAAAGAAGCCAATGAGTGAGAAGTTCCCACACCGTCTAGCAAGGAACTTATCTTTGTaGCATGAGTGCCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: FRCVGKKPMSEKFPHRLARNLSL*HECQAH
Trigger: GTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCT...TGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp AAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCACACAGTAACATTCGATTCAGGCTaGAGGCACGGCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: KCTESGTYLCDMSARHTVTFDSG*RHGNSS
Trigger: GGAGGAGTTGCCGTGCCTTCAGCCTGAATCGAATGT...TACTGTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp TCAGACGACCGAGGGTACAGGAAGAATCAAACTCAGTCAACCATTCTTCAACCCCCTGCACACAGCAGGTaGTCAGTAAGTGTACCGAAT +
Preference number: 4 (lower is better)
Translates to: SDDRGYRKNQTQSTILQPPAHSR*SVSVPN
Trigger: ATTCGGTACACTTACTGAGCACCTGCTGTGTGCAGG...GGGTTGAAGAATGGTTGACTGAGTTTGATTCTTCCTGTACCCTCGGTCGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp AAAGTACCTTGTTTACTCCCATTCCCATCCCATAGCTCAGCTCCCTGCACACAGTGTGGCATGAAGAAGTaGAGGAACCGATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KVPCLLPFPSHSSAPCTQCGMKK*RNRSCS
Trigger: TGAACAAGATCGGTTCCTTCACTTCTTCATGCCACA...CTGTGTGCAGGGAGCTGAGCTATGGGATGGGAATGGGAGTAAACAAGGTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCTTTGGCTTTCTGGCTaGTACCCCTCAGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: VLSKCTESGTYLCDMSARLWLSG*YPSEFI
Trigger: GATGAACTCTGAGGGGTAGCAGCCAGAAAGCCAAAG...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR GCA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGTCTTGTTCATCTCTGTaGCCCAGCACTCGGCATGTA +
Preference number: 4 (lower is better)
Translates to: VLSKCTESGTYLCDMSARSCSSL*PSTRHV
Trigger: TACATGCCGAGTGCTGGGGCACAGAGATGAACAAGA...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR TCA 90 bp TTCAGGTGTGTGGGAAAGAAGCCAATGAGTGAGAAGTTCCCACACCGTCTAGCATCATCAGACGTCTCTTaGAGAAGATCTCAAAACGCA +
Preference number: 4 (lower is better)
Translates to: FRCVGKKPMSEKFPHRLASSDVS*RRSQNA
Trigger: TGCGTTTTGAGATCTTCTTCAAGAGACGTCTGATGA...TGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 90 bp GGGTGCCGCAGCCGCTCGAGTGCGCCCAGCGTGGTGGGCAACGCGTaGGCCGCGTTTCGCGCCAACAGCGCGATGAGCACGCGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: GCRSRSSAPSVVGNA*AAFRANSAMSTRGA
Trigger: GGCGCCGCGCGTGCTCATCGCGCTGTTGGCGCGAAACGCGGCCCACGCGTTGCCCACCACGCTGGGCGCACTCGAGCGGCTGCGGCACCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS GCA 90 bp ATGTTGTGGTCCGTAGCCACCCATAGCGCCGTGCGCTCCCGCGGGTaGCGCAGCCGCTCGAGTGCGCCCAGCGTGGTGGGCAACGCGTGG +
Preference number: 5 (lower is better)
Translates to: MLWSVATHSAVRSRG*RSRSSAPSVVGNAW
Trigger: CCACGCGTTGCCCACCACGCTGGGCGCACTCGAGCGGCTGCGGCACCCGCGGGAGCGCACGGCGCTATGGGTGGCTACGGACCACAACAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 90 bp CCTTCTCGGGGTGCTCCACCTGCATCCGCTTCCGGCCCACATAGCTaGGGTGCAAGATCGGGCCTGTCACTCTCCTCCCGCCCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: PSRGAPPASASGPHS*GARSGLSLSSRPPE
Trigger: CTCCGGAGGGCGGGAGGAGAGTGACAGGCCCGATCTTGCACCCCAGCTATGTGGGCCGGAAGCGGATGCAGGTGGAGCACCCCGAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS TCA 90 bp CGGGAGGGCTCTGCGGGCGGGTGCTTCACTGTGGGGCACAGACGTTaGGGAGTCGCTGGGGTAAGGAGCCTCCAGCCTCTCTCCAACACG +
Preference number: 5 (lower is better)
Translates to: REGSAGGCFTVGHRR*GVAGVRSLQPLSNT
Trigger: CGTGTTGGAGAGAGGCTGGAGGCTCCTTACCCCAGCGACTCCTCAACGTCTGTGCCCCACAGTGAAGCACCCGCCCGCAGAGCCCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597075.1
CDS-3UTR CAA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGCGCATCTTCTGGGACTaGGCGCGGTCCCAGTCGGTC +
Preference number: 5 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGRIFWD*ARSQSV
Trigger: GACCGACTGGGACCGCGCCAAGTCCCAGAAGATGCG...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS TCA 90 bp CCTCGTCGAAGCCCATCTTGTCCGGTGTCTTGGTGGGAGCCGAGATaGAGCGGGAGGGCTCTGCGGGCGGGTGCTTCACTGTGGGGCACA +
Preference number: 5 (lower is better)
Translates to: PRRSPSCPVSWWEPR*SGRALRAGASLWGT
Trigger: TGTGCCCCACAGTGAAGCACCCGCCCGCAGAGCCCTCCCGCTTCATCTCGGCTCCCACCAAGACACCGGACAAGATGGGCTTCGACGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597075.1
CDS TCA 90 bp CCTCGTCGAAGCCCATCTTGTCCGGTGTCTTGGTGGGAGCCGAGATaGAGCGGGAGGGCTCTGCGGGCGGGTGCTTCACTGCCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: PRRSPSCPVSWWEPR*SGRALRAGASLPAC
Trigger: GCAAGCAGGCAGTGAAGCACCCGCCCGCAGAGCCCTCCCGCTTCATCTCGGCTCCCACCAAGACACCGGACAAGATGGGCTTCGACGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597147.1
CDS GCA 90 bp CTTGTCCGGTGTCTTGGTGGGAGCCGAGATGAAGCGGGAGGGCTCTaGGGGCGGGTGCTTCACTGTGGGGCACAGACGTTGAGGAGTCGC +
Preference number: 5 (lower is better)
Translates to: LVRCLGGSRDEAGGL*GRVLHCGAQTLRSR
Trigger: GCGACTCCTCAACGTCTGTGCCCCACAGTGAAGCACCCGCCCGCAGAGCCCTCCCGCTTCATCTCGGCTCCCACCAAGACACCGGACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597075.1
CDS CCA 90 bp CCCGGGCAGCACTGTCCAGTGGGGACTGGAGCACGTCCGAGTTCTTaGCCTCACGGCTCAGTGCCTGCTGCTCCCGCATCTTCTGGGACT +
Preference number: 5 (lower is better)
Translates to: PGQHCPVGTGARPSS*PHGSVPAAPASSGT
Trigger: AGTCCCAGAAGATGCGGGAGCAGCAGGCACTGAGCCGTGAGGCCAAGAACTCGGACGTGCTCCAGTCCCCACTGGACAGTGCTGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS GCA 90 bp GACTGGAGCACGTCCGAGTTCTTGGCCTCACGGCTCAGTGCCTGCTaGTCCCGCATCTTCTGGGACTTGGCGCGGTCCCAGTCGGTCTTG +
Preference number: 5 (lower is better)
Translates to: DWSTSEFLASRLSAC*SRIFWDLARSQSVL
Trigger: CAAGACCGACTGGGACCGCGCCAAGTCCCAGAAGATGCGGGAGCAGCAGGCACTGAGCCGTGAGGCCAAGAACTCGGACGTGCTCCAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CCA 90 bp GCTACCCCTCAGAGTTCATCCCGGGCAGCACTGTCCAGTGGGGACTaGAGCACGTCCGAGTTCTTGGCCTCACGGCTCAGTGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ATPQSSSRAALSSGD*STSEFLASRLSACC
Trigger: GCAGCAGGCACTGAGCCGTGAGGCCAAGAACTCGGACGTGCTCCAGTCCCCACTGGACAGTGCTGCCCGGGATGAACTCTGAGGGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS-3UTR CAA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGCCGCCGCCTCAGGTaGATCATGAAGACCTCGTCG +
Preference number: 5 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGCRRLR*IMKTSS
Trigger: CGACGAGGTCTTCATGATCAACCTGAGGCGGCGGCA...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS GCA 90 bp AGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCTGGCTaGTACCCCTCAGAGTTCATCCCGGGCAGCACTGTCCAGTGGGGA +
Preference number: 5 (lower is better)
Translates to: STWSLGHRWLLWLSG*YPSEFIPGSTVQWG
Trigger: TCCCCACTGGACAGTGCTGCCCGGGATGAACTCTGAGGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS GCA 90 bp GCAAGATCGGGCCTGTCACTCTCCTCCCGCCCTCCGGAGGGAGCTTaGCCAGAAAGCCAGGGATCTAGTTACCCCGTCAGGTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: ARSGLSLSSRPPEGA*PESQGSSYPVRSWD
Trigger: ATCCCAGGACCTGACGGGGTAACTAGATCCCTGGCTTTCTGGGCAAGCTCCCTCCGGAGGGCGGGAGGAGAGTGACAGGCCCGATCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CCA 90 bp TCTGGCTGCTACCCCTCAGAGTTCATCCCGGGCAGCACTGTCCAGTaGGGACTGGAGCACGTCCGAGTTCTTGGCCTCACGGCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: SGCYPSEFIPGSTVQ*GLEHVRVLGLTAQC
Trigger: GCACTGAGCCGTGAGGCCAAGAACTCGGACGTGCTCCAGTCCCCACTGGACAGTGCTGCCCGGGATGAACTCTGAGGGGTAGCAGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS-3UTR CAA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGCTCAGTGTGTCAGGGTaGAGGATCAGGTTGTCCGCA +
Preference number: 5 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWLSVSG*RIRLSA
Trigger: TGCGGACAACCTGATCCTCAACCCTGACACACTGAG...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGATTCCACACCAGAAGTaGGAGTACGCAGCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWIPHQK*EYAARE
Trigger: TTCCCGGGCTGCGTACTCCAACTTCTGGTGTGGAAT...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGCGGTCCCAGTCGGTCTaGACGTGCTCATTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWRSQSV*TCSLFH
Trigger: ATGGAACAATGAGCACGTCAAGACCGACTGGGACCG...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 90 bp GAGTTCTTGGCCTCACGGCTCAGTGCCTGCTGCTCCCGCATCTTCTaGGACTTGGCGCGGTCCCAGTCGGTCTTGACGTGCTCATTGTTC +
Preference number: 5 (lower is better)
Translates to: EFLASRLSACCSRIF*DLARSQSVLTCSLF
Trigger: GAACAATGAGCACGTCAAGACCGACTGGGACCGCGCCAAGTCCCAGAAGATGCGGGAGCAGCAGGCACTGAGCCGTGAGGCCAAGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CCA 90 bp AGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCTaGCTGCTACCCCTCAGAGTTCATCCCGGGCAGCACTGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SKHVEPGPPMAALAF*LLPLRVHPGQHCPV
Trigger: CACTGGACAGTGCTGCCCGGGATGAACTCTGAGGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS-3UTR CAA 90 bp CCACCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGGGGTTGAGGATCAGGTaGTCCGCATCTACAAACAGG +
Preference number: 5 (lower is better)
Translates to: PPGPVLAPGGGRATLPLGGLRIR*SASTNR
Trigger: CCTGTTTGTAGATGCGGACAACCTGATCCTCAACCC...CCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGCAGCCCAGCTCACCCTaGGTGAGGGGCCGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: VTLFCITSARHTVSALQVQPSSP*VRGRPW
Trigger: CCACGGCCGGCCCCTCACCAAGGGTGAGCTGGGCTG...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCCAGTTTGCGGGCGCCTaGCAGGGAGATCACGTAGGC +
Preference number: 5 (lower is better)
Translates to: DVLSKHVEPGPPMAALAFQFAGA*QGDHVG
Trigger: GCCTACGTGATCTCCCTGCAAGGCGCCCGCAAACTG...GAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp TTGCTTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCGAGAAACAAGAATaGCTGGACGCTGGGAGGCGC +
Preference number: 5 (lower is better)
Translates to: LLSKSWLDTTPHESPLWPAEKQE*LDAGRR
Trigger: GCGCCTCCCAGCGTCCAGCAATTCTTGTTTCTCGGC...AGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 90 bp ACCATGACCTCCAGCTGCACATGCATGAAGCTCTCGGCCTCATCCTaGAGGGTGCTGTGGGCGCGCAATGGCACTGGCAAGAATCCGTAC +
Preference number: 5 (lower is better)
Translates to: TMTSSCTCMKLSASS*RVLWARNGTGKNPY
Trigger: GTACGGATTCTTGCCAGTGCCATTGCGCGCCCACAGCACCCTCCAGGATGAGGCCGAGAGCTTCATGCATGTGCAGCTGGAGGTCATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 90 bp ATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTaGCTTTCTGGCTGCTACCCCTCAGAGTTCATCCCGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: MSSVSTWSLGHRWLL*LSGCYPSEFIPGST
Trigger: AGTGCTGCCCGGGATGAACTCTGAGGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS-3UTR CAA 90 bp TTAGCAAGAGCTGGCTGGACACCACCCCACACGAGAGCCCTCTGTGGCCTGCCAATCTTGTCCGGTGTCTaGGTGGGAGCCGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: LARAGWTPPHTRALCGLPILSGV*VGAEMK
Trigger: CTTCATCTCGGCTCCCACCAAGACACCGGACAAGAT...TGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS GCA 90 bp CCACCTCCACAGGCCTCAGTCAAGTCTCTAAGCCTTGACCAAGCCTaGAGGCTTCCGGCCAGGTCCCTTGAGTTCTGGGTGATCCTTCCA +
Preference number: 5 (lower is better)
Translates to: PPPQASVKSLSLDQA*RLPARSLEFWVILP
Trigger: TGGAAGGATCACCCAGAACTCAAGGGACCTGGCCGGAAGCCTGCAGGCTTGGTCAAGGCTTAGAGACTTGACTGAGGCCTGTGGAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CCA 90 bp AGCTGCACATGCATGAAGCTCTCGGCCTCATCCTGGAGGGTGCTGTaGGCGCGCAATGGCACTGGCAAGAATCCGTACTCCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SCTCMKLSASSWRVL*ARNGTGKNPYSSLL
Trigger: CAACAAGGAGGAGTACGGATTCTTGCCAGTGCCATTGCGCGCCCACAGCACCCTCCAGGATGAGGCCGAGAGCTTCATGCATGTGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 90 bp CACTTACAGAAGAGAAGGACGGCTCCAGTGCTGGAAACATGTTGGTaGCACTCCCATCCAGGGGCTTGTCTAAGACCAGGCGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: HLQKRRTAPVLETCW*HSHPGACLRPGALA
Trigger: GGCCAGGGCGCCTGGTCTTAGACAAGCCCCTGGATGGGAGTGCCACCAACATGTTTCCAGCACTGGAGCCGTCCTTCTCTTCTGTAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CCA 90 bp GCCCACTTACAGAAGAGAAGGACGGCTCCAGTGCTGGAAACATGTTaGTGGCACTCCCATCCAGGGGCTTGTCTAAGACCAGGCGCCCTG +
Preference number: 5 (lower is better)
Translates to: AHLQKRRTAPVLETC*WHSHPGACLRPGAL
Trigger: CAGGGCGCCTGGTCTTAGACAAGCCCCTGGATGGGAGTGCCACCAACATGTTTCCAGCACTGGAGCCGTCCTTCTCTTCTGTAAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS TCA 90 bp ATGGTACAAACTCTTCACGGCCACCAGCCACTCCCGCAGCACAGTTaGCGTGTTATCCATGTTGTGGTCCGTAGCCACCCTTGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: MVQTLHGHQPLPQHS*RVIHVVVRSHPWPP
Trigger: GGGAGGCCAAGGGTGGCTACGGACCACAACATGGATAACACGTCAACTGTGCTGCGGGAGTGGCTGGTGGCCGTGAAGAGTTTGTACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600474.1
CDS-3UTR CAA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAAGGGGCGACCACCGTCTaGTTCTCAGCGATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKGATTV*FSAMSR
Trigger: CCTGCTCATCGCTGAGAACAAGACGGTGGTCGCCCC...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp ACAGATGAAGAGGGCTTGGTTCCTCCCAATTCCCCAGGGCCAAGCCCTGTTGCTTCGGACACTGGGTGTTaGTCGAACATGACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: TDEEGLVPPNSPGPSPVASDTGC*SNMTGR
Trigger: CCTGCCCGTCATGTTCGACAAACACCCAGTGTCCGA...AGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS TCA 90 bp CCCACATGTCTCGAGCTGATTTCAGGGCTGCCTGGCGCAACTTCATaGCATGCTCGTAGCGTGAGTCAGACCAGTGTTTCGGGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PTCLELISGLPGATS*HARSVSQTSVSGLP
Trigger: AGGAAGGCCCGAAACACTGGTCTGACTCACGCTACGAGCATGTCATGAAGTTGCGCCAGGCAGCCCTGAAATCAGCTCGAGACATGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000600474.1
CDS CCA 90 bp CATGAAGCTCTCGGCCTCATCCTGGAGGGTGCTGTGGGCGCGCAATaGCACTGGCAAGAATCCGTACTCCTCCTTGTTGCACACATACAT +
Preference number: 5 (lower is better)
Translates to: HEALGLILEGAVGAQ*HWQESVLLLVAHIH
Trigger: ATGTATGTGTGCAACAAGGAGGAGTACGGATTCTTGCCAGTGCCATTGCGCGCCCACAGCACCCTCCAGGATGAGGCCGAGAGCTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCAACTCCCGCAGCACAGTaGACGTGTTATCCATGTTGT +
Preference number: 5 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPTPAAQ*TCYPCC
Trigger: ACAACATGGATAACACGTCAACTGTGCTGCGGGAGT...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGGAGAAGGCATGCAGGTaGCGGAGGGAGAAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: VTLFCITSARHTVSALQVEKACR*RREKWA
Trigger: GGCCCACTTCTCCCTCCGCAACCTGCATGCCTTCTC...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp CCAGGACCTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGGTGCTCAATAAACACTaGTGGCATGAAGAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: PGPVLAPGGGRATLPLGWVLNKH*WHEEVK
Trigger: CTTCACTTCTTCATGCCACAAGTGTTTATTGAGCAC...CCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GAAGTGAAGGAACCGATCTTGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGCTCGTCGAAGCCCATCTaGTCCGGTGTCTTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: EVKEPILFISVPQHSACSSSKPI*SGVLVG
Trigger: TCCCACCAAGACACCGGACAAGATGGGCTTCGACGA...GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GTCACACTCTTTTGTATCACTAGTGCCCGGCACACAGTCAGTGCTCTTCAGGTGCCACCGATGGCTGCTTaGGCTTTCTGGCTGCTACCC +
Preference number: 5 (lower is better)
Translates to: VTLFCITSARHTVSALQVPPMAA*AFWLLP
Trigger: GGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGG...CACCTGAAGAGCACTGACTGTGTGCCGGGCACTAGTGATACAAAAGAGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCTATAGTCCCAGCTACTaGGGAGGCCGAGAAACAAGA +
Preference number: 5 (lower is better)
Translates to: DVLSKHVEPGPPMAALAFYSPSY*GGRETR
Trigger: TCTTGTTTCTCGGCCTCCCAAGTAGCTGGGACTATA...GAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS GCA 90 bp TGTGGGCGCGCAATGGCACTGGCAAGAATCCGTACTCCTCCTTGTTaGACACATACATCTGAACCTCTGCCTGCTTGCAGGAGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: CGRAMALARIRTPPC*THTSEPLPACRRRQ
Trigger: TTGCCTTCTCCTGCAAGCAGGCAGAGGTTCAGATGTATGTGTGCAACAAGGAGGAGTACGGATTCTTGCCAGTGCCATTGCGCGCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp TCAGACGACCGAGGGTACAGGAAGAATCAAACTCAGTCAACCATTCTTCAACCCCTGGTGTTCATGGCTTaGCCGTCCACGGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: SDDRGYRKNQTQSTILQPLVFMA*PSTAST
Trigger: GGTGGAGGCCGTGGACGGCAAAGCCATGAACACCAG...GGGTTGAAGAATGGTTGACTGAGTTTGATTCTTCCTGTACCCTCGGTCGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp TCAGACGACCGAGGGTACAGGAAGAATCAAACTCAGTCAACCATTCTTCAACCCCAGGGCCAAGCCCTGTaGCTGGCATGCAGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: SDDRGYRKNQTQSTILQPQGQAL*LACSRH
Trigger: GTGCCTACTGCATGCCAGCAACAGGGCTTGGCCCTG...GGGTTGAAGAATGGTTGACTGAGTTTGATTCTTCCTGTACCCTCGGTCGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS TCA 90 bp GTCCGCATCTACAAACAGGATGTAATCAGCCCACATGTCTCGAGCTaGTTTCAGGGCTGCCTGGCGCAACTTCATGACATGCTCGTAGCG +
Preference number: 5 (lower is better)
Translates to: VRIYKQDVISPHVSS*FQGCLAQLHDMLVA
Trigger: CGCTACGAGCATGTCATGAAGTTGCGCCAGGCAGCCCTGAAATCAGCTCGAGACATGTGGGCTGATTACATCCTGTTTGTAGATGCGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000600474.1
CDS-3UTR CAA 90 bp AAAGTACCTTGTTTACTCCCATTCCCATCCCATAGCTCAGCTCCCTGCACACAGAGGGAGAAGTGGGCCTaGTACTCGGACACTGGGTGT +
Preference number: 5 (lower is better)
Translates to: KVPCLLPFPSHSSAPCTQREKWA*YSDTGC
Trigger: ACACCCAGTGTCCGAGTACAAGGCCCACTTCTCCCT...CTGTGTGCAGGGAGCTGAGCTATGGGATGGGAATGGGAGTAAACAAGGTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGAGCACGTCCGAGTTCTaGGCCTCACGGCTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VLSKCTESGTYLCDMSARSTSEF*ASRLSA
Trigger: GGCACTGAGCCGTGAGGCCAAGAACTCGGACGTGCT...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAAACAGATGAAGAGGGCTaGGTTCCTCCCAATTCCCCA +
Preference number: 5 (lower is better)
Translates to: GGCCLHTAQTTEGTGRIKTDEEG*VPPNSP
Trigger: TGGGGAATTGGGAGGAACCAAGCCCTCTTCATCTGT...TTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GAAGTGAAGGAACCGATCTTGTTCATCTCTGTGCCCCAGCACTCGGCATGTAGCGTCTTGACGTGCTCATaGTTCCATACGACTGAGGTC +
Preference number: 5 (lower is better)
Translates to: EVKEPILFISVPQHSACSVLTCS*FHTTEV
Trigger: GACCTCAGTCGTATGGAACAATGAGCACGTCAAGAC...GCTACATGCCGAGTGCTGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp TTCAGGTGTGTGGGAAAGAAGCCAATGAGTGAGAAGTTCCCACACCGTCTAGCAGACGTGTTATCCATGTaGTGGTCCGTAGCCACCCAT +
Preference number: 5 (lower is better)
Translates to: FRCVGKKPMSEKFPHRLADVLSM*WSVATH
Trigger: ATGGGTGGCTACGGACCACAACATGGATAACACGTC...TGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp AAGGGGTCCAGAGGTGGACCTGATGTCCTCAGTAAGCACGTGGAGCCTGGGCCAGTGACCAATATGTGCTaGAATAAATGGATAGAAGCA +
Preference number: 5 (lower is better)
Translates to: KGSRGGPDVLSKHVEPGPVTNMC*NKWIEA
Trigger: TGCTTCTATCCATTTATTCAAGCACATATTGGTCAC...TGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTGGACCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp GTGCTCAGTAAGTGTACCGAATCAGGAACTTATCTTTGTGACATGAGTGCCAGGCTGATCAGTAACTGCTaGATGACTGAATCAATCGCT +
Preference number: 5 (lower is better)
Translates to: VLSKCTESGTYLCDMSARLISNC*MTESIA
Trigger: AGCGATTGATTCAGTCATCAAGCAGTTACTGATCAG...CCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTACACTTACTGAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS-3UTR CAA 90 bp TCAGACGACCGAGGGTACAGGAAGAATCAAACTCAGTCAACCATTCTTCAACCCAAAGTAAAAAGTACCTaGTTTACTCCCATTCCCATC +
Preference number: 5 (lower is better)
Translates to: SDDRGYRKNQTQSTILQPKVKST*FTPIPI
Trigger: GATGGGAATGGGAGTAAACAAGGTACTTTTTACTTT...GGGTTGAAGAATGGTTGACTGAGTTTGATTCTTCCTGTACCCTCGGTCGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS GCA 72 bp CGCCGTGCGCTCCCGCGGGTGCCGCAGCCGCTCGAGTaGGCCCAGCGTGGTGGGCAACGCGTGGGCCGCGTT +
Preference number: 6 (lower is better)
Translates to: RRALPRVPQPLE*AQRGGQRVGRV
Trigger: AACGCGGCCCACGCGTTGCCCACCACGCTGGGCGCACTCGAGCGGCTGCGGCACCCGCGGGAGCGCACGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS GCA 72 bp TCCGTAGCCACCCATAGCGCCGTGCGCTCCCGCGGGTaGCGCAGCCGCTCGAGTGCGCCCAGCGTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: SVATHSAVRSRG*RSRSSAPSVVG
Trigger: GCCCACCACGCTGGGCGCACTCGAGCGGCTGCGGCACCCGCGGGAGCGCACGGCGCTATGGGTGGCTACGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 72 bp GCGGGTGCCGCAGCCGCTCGAGTGCGCCCAGCGTGGTaGGCAACGCGTGGGCCGCGTTTCGCGCCAACAGCG +
Preference number: 6 (lower is better)
Translates to: AGAAAARVRPAW*ATRGPRFAPTA
Trigger: CGCTGTTGGCGCGAAACGCGGCCCACGCGTTGCCCACCACGCTGGGCGCACTCGAGCGGCTGCGGCACCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 72 bp CCCGCGGGTGCCGCAGCCGCTCGAGTGCGCCCAGCGTaGTGGGCAACGCGTGGGCCGCGTTTCGCGCCAACA +
Preference number: 6 (lower is better)
Translates to: PAGAAAARVRPA*WATRGPRFAPT
Trigger: TGTTGGCGCGAAACGCGGCCCACGCGTTGCCCACCACGCTGGGCGCACTCGAGCGGCTGCGGCACCCGCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS GCA 72 bp TTTCGCGCCAACAGCGCGATGAGCACGCGCGGCGCCTaGAGGGGCGACTCCGGGCTCCAGCGCTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: FRANSAMSTRGA*RGDSGLQRSSG
Trigger: CCCCGAGGAGCGCTGGAGCCCGGAGTCGCCCCTGCAGGCGCCGCGCGTGCTCATCGCGCTGTTGGCGCGAAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS GCA 72 bp ACGGCCTCCACCAGCCGGCACTCGATCTCCTGTGCCTaGAGCGCCCGCAGCATGCGCTCCCGCCGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: TASTSRHSISCA*SARSMRSRRSC
Trigger: GCAGGACCGGCGGGAGCGCATGCTGCGGGCGCTGCAGGCACAGGAGATCGAGTGCCGGCTGGTGGAGGCCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252599.9
ENST00000597075.1
ENST00000597147.1
CDS CCA 72 bp AGCCGCTCGAGTGCGCCCAGCGTGGTGGGCAACGCGTaGGCCGCGTTTCGCGCCAACAGCGCGATGAGCACG +
Preference number: 6 (lower is better)
Translates to: SRSSAPSVVGNA*AAFRANSAMST
Trigger: CGTGCTCATCGCGCTGTTGGCGCGAAACGCGGCCCACGCGTTGCCCACCACGCTGGGCGCACTCGAGCGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CAA 90 bp GCGGGAGGGCTCTGCGGGCGGGTGCTTCACTGTGGGGCACAGACGTaGAGGAGTCGCTGGGGTAAGGAGCCTCCAGCCTCTCTCCAACAC +
Preference number: 6 (lower is better)
Translates to: AGGLCGRVLHCGAQT*RSRWGKEPPASLQH
Trigger: GTGTTGGAGAGAGGCTGGAGGCTCCTTACCCCAGCGACTCCTCAACGTCTGTGCCCCACAGTGAAGCACCCGCCCGCAGAGCCCTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597075.1
CDS CCA 72 bp GGTGCTCCACCTGCATCCGCTTCCGGCCCACATAGCTaGGGTGCAAGATCGGGCCTGTCACTCTCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: GAPPASASGPHS*GARSGLSLSSR
Trigger: GCGGGAGGAGAGTGACAGGCCCGATCTTGCACCCCAGCTATGTGGGCCGGAAGCGGATGCAGGTGGAGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS TCA 72 bp AGCCCATCTTGTCCGGTGTCTTGGTGGGAGCCGAGATaGAGCGGGAGGGCTCTGCGGGCGGGTGCTTCACCA +
Preference number: 6 (lower is better)
Translates to: SPSCPVSWWEPR*SGRALRAGASP
Trigger: TGGTGAAGCACCCGCCCGCAGAGCCCTCCCGCTTCATCTCGGCTCCCACCAAGACACCGGACAAGATGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS TCA 72 bp TCTGCGGGCGGGTGCTTCACTGTGGGGCACAGACGTTaGGGAGTCGCTGGGGTAAGGAGCCTCCAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: SAGGCFTVGHRR*GVAGVRSLQPL
Trigger: GAGAGGCTGGAGGCTCCTTACCCCAGCGACTCCTCAACGTCTGTGCCCCACAGTGAAGCACCCGCCCGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597075.1
CDS TCA 72 bp AGCCCATCTTGTCCGGTGTCTTGGTGGGAGCCGAGATaGAGCGGGAGGGCTCTGCGGGCGGGTGCTTCACTG +
Preference number: 6 (lower is better)
Translates to: SPSCPVSWWEPR*SGRALRAGASL
Trigger: CAGTGAAGCACCCGCCCGCAGAGCCCTCCCGCTTCATCTCGGCTCCCACCAAGACACCGGACAAGATGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597075.1
ENST00000597147.1
CDS GCA 72 bp GCAGCATCTTGGAGAGCGGCTCAGCAGCCAGCAGTTTaGGGGCGCCTTGCAGGGAGATCACGTAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: AASWRAAQQPAV*GRLAGRSRRPG
Trigger: CCCTGGCCTACGTGATCTCCCTGCAAGGCGCCCGCAAACTGCTGGCTGCTGAGCCGCTCTCCAAGATGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252599.9
ENST00000593832.1
ENST00000597075.1
CDS GCA 72 bp ACGTCCGAGTTCTTGGCCTCACGGCTCAGTGCCTGCTaGTCCCGCATCTTCTGGGACTTGGCGCGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: TSEFLASRLSAC*SRIFWDLARSQ
Trigger: CTGGGACCGCGCCAAGTCCCAGAAGATGCGGGAGCAGCAGGCACTGAGCCGTGAGGCCAAGAACTCGGACGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS GCA 72 bp GGCCTGTCACTCTCCTCCCGCCCTCCGGAGGGAGCTTaGCCAGAAAGCCAGGGATCTAGTTACCCCGTCAGG +
Preference number: 6 (lower is better)
Translates to: GLSLSSRPPEGA*PESQGSSYPVR
Trigger: CCTGACGGGGTAACTAGATCCCTGGCTTTCTGGGCAAGCTCCCTCCGGAGGGCGGGAGGAGAGTGACAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CAA 72 bp GCACTGTCCAGTGGGGACTGGAGCACGTCCGAGTTCTaGGCCTCACGGCTCAGTGCCTGCTGCTCCCGCATC +
Preference number: 6 (lower is better)
Translates to: ALSSGDWSTSEF*ASRLSACCSRI
Trigger: GATGCGGGAGCAGCAGGCACTGAGCCGTGAGGCCAAGAACTCGGACGTGCTCCAGTCCCCACTGGACAGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CAA 72 bp CTCTGCGGGCGGGTGCTTCACTGTGGGGCACAGACGTaGAGGAGTCGCTGGGGTAAGGAGCCTCCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: LCGRVLHCGAQT*RSRWGKEPPAS
Trigger: AGAGGCTGGAGGCTCCTTACCCCAGCGACTCCTCAACGTCTGTGCCCCACAGTGAAGCACCCGCCCGCAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597075.1
CDS CAA 90 bp GGCTCCAGTGCTGGAAACATGTTGGTGGCACTCCCATCCAGGGGCTaGTCTAAGACCAGGCGCCCTGGCCACGCCCCCACACTCTTCGGC +
Preference number: 6 (lower is better)
Translates to: GSSAGNMLVALPSRG*SKTRRPGHAPTLFG
Trigger: GCCGAAGAGTGTGGGGGCGTGGCCAGGGCGCCTGGTCTTAGACAAGCCCCTGGATGGGAGTGCCACCAACATGTTTCCAGCACTGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS GCA 72 bp GCGGGCGGGTGCTTCACCATGACCTCCAGCTGCACATaGATGAAGCTCTCGGCCTCATCCTGGAGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: AGGCFTMTSSCT*MKLSASSWRVL
Trigger: CAGCACCCTCCAGGATGAGGCCGAGAGCTTCATGCATGTGCAGCTGGAGGTCATGGTGAAGCACCCGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS GCA 72 bp GGCTCTGCGGGCGGGTGCTTCACCATGACCTCCAGCTaGACATGCATGAAGCTCTCGGCCTCATCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GSAGGCFTMTSS*TCMKLSASSWR
Trigger: CCTCCAGGATGAGGCCGAGAGCTTCATGCATGTGCAGCTGGAGGTCATGGTGAAGCACCCGCCCGCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 72 bp CACTGTCCAGTGGGGACTGGAGCACGTCCGAGTTCTTaGCCTCACGGCTCAGTGCCTGCTGCTCCCGCATCT +
Preference number: 6 (lower is better)
Translates to: HCPVGTGARPSS*PHGSVPAAPAS
Trigger: AGATGCGGGAGCAGCAGGCACTGAGCCGTGAGGCCAAGAACTCGGACGTGCTCCAGTCCCCACTGGACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CCA 72 bp GTGGAGCCTGGGCCACCGATGGCTGCTTTGGCTTTCTaGCTGCTACCCCTCAGAGTTCATCCCGGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: VEPGPPMAALAF*LLPLRVHPGQH
Trigger: GTGCTGCCCGGGATGAACTCTGAGGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CAA 72 bp GCTGGAAACATGTTGGTGGCACTCCCATCCAGGGGCTaGTCTAAGACCAGGCGCCCTGGCCACGCCCCCACA +
Preference number: 6 (lower is better)
Translates to: AGNMLVALPSRG*SKTRRPGHAPT
Trigger: TGTGGGGGCGTGGCCAGGGCGCCTGGTCTTAGACAAGCCCCTGGATGGGAGTGCCACCAACATGTTTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CAA 90 bp AGGTTGATCATGAAGACCTCGTCGAAGCCCATCTTGTCCGGTGTCTaGGTGGGAGCCGAGATGAAGCGGGAGGGCTCTGCGGGCGGGTGC +
Preference number: 6 (lower is better)
Translates to: RLIMKTSSKPILSGV*VGAEMKREGSAGGC
Trigger: GCACCCGCCCGCAGAGCCCTCCCGCTTCATCTCGGCTCCCACCAAGACACCGGACAAGATGGGCTTCGACGAGGTCTTCATGATCAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252599.9
ENST00000597075.1
ENST00000597147.1
CDS CCA 72 bp CACTCCCGCAGCACAGTTGACGTGTTATCCATGTTGTaGTCCGTAGCCACCCATAGCGCCGTGCGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: HSRSTVDVLSML*SVATHSAVRSR
Trigger: GCGGGAGCGCACGGCGCTATGGGTGGCTACGGACCACAACATGGATAACACGTCAACTGTGCTGCGGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 72 bp GCCTTCCTCGTCCGGGTAGGACCTGGGCTCCTCTGCTaGCCGCCACTCCACGGAATGGTACAAACTCTTCAC +
Preference number: 6 (lower is better)
Translates to: AFLVRVGPGLLC*PPLHGMVQTLH
Trigger: GTGAAGAGTTTGTACCATTCCGTGGAGTGGCGGCCAGCAGAGGAGCCCAGGTCCTACCCGGACGAGGAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000600474.1
CDS CCA 72 bp TGTAGTCAGGGTGAGGTGGGTAGAAGGCCAGGTTCCTaGACGCCGCCTTCCGCAGGTCGATCAGGAAGGTCG +
Preference number: 6 (lower is better)
Translates to: CSQGEVGRRPGS*TPPSAGRSGRS
Trigger: CGACCTTCCTGATCGACCTGCGGAAGGCGGCGTCCAGGAACCTGGCCTTCTACCCACCTCACCCTGACTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000601354.1
CDS CCA 72 bp CAGAGTTCATCCCGGGCAGCACTGTCCAGTGGGGACTaGAGCACGTCCGAGTTCTTGGCCTCACGGCTCAGT +
Preference number: 6 (lower is better)
Translates to: QSSSRAALSSGD*STSEFLASRLS
Trigger: ACTGAGCCGTGAGGCCAAGAACTCGGACGTGCTCCAGTCCCCACTGGACAGTGCTGCCCGGGATGAACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CCA 72 bp TACCCCTCAGAGTTCATCCCGGGCAGCACTGTCCAGTaGGGACTGGAGCACGTCCGAGTTCTTGGCCTCACG +
Preference number: 6 (lower is better)
Translates to: YPSEFIPGSTVQ*GLEHVRVLGLT
Trigger: CGTGAGGCCAAGAACTCGGACGTGCTCCAGTCCCCACTGGACAGTGCTGCCCGGGATGAACTCTGAGGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CAA 90 bp TTGGCCTCACGGCTCAGTGCCTGCTGCTCCCGCATCTTCTGGGACTaGGCGCGGTCCCAGTCGGTCTTGACGTGCTCATTGTTCCATACG +
Preference number: 6 (lower is better)
Translates to: LASRLSACCSRIFWD*ARSQSVLTCSLFHT
Trigger: CGTATGGAACAATGAGCACGTCAAGACCGACTGGGACCGCGCCAAGTCCCAGAAGATGCGGGAGCAGCAGGCACTGAGCCGTGAGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CAA 90 bp GATGTCCTCAGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTaGGCTTTCTGGCTGCTACCCCTCAGAGTTCATCCCGGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: DVLSKHVEPGPPMAA*AFWLLPLRVHPGQH
Trigger: GTGCTGCCCGGGATGAACTCTGAGGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS TCA 72 bp GGCTGCCTGGCGCAACTTCATGACATGCTCGTAGCGTaGGTCAGACCAGTGTTTCGGGCCTTCCTCGTCCGG +
Preference number: 6 (lower is better)
Translates to: GCLAQLHDMLVA*VRPVFRAFLVR
Trigger: CCGGACGAGGAAGGCCCGAAACACTGGTCTGACTCACGCTACGAGCATGTCATGAAGTTGCGCCAGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000600474.1
CDS CCA 72 bp CTCGGCCTCATCCTGGAGGGTGCTGTGGGCGCGCAATaGCACTGGCAAGAATCCGTACTCCTCCTTGTTGCA +
Preference number: 6 (lower is better)
Translates to: LGLILEGAVGAQ*HWQESVLLLVA
Trigger: TGCAACAAGGAGGAGTACGGATTCTTGCCAGTGCCATTGCGCGCCCACAGCACCCTCCAGGATGAGGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 72 bp GTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTTaGCTTTCTGGCTGCTACCCCTCAGAGTTCATCCCG +
Preference number: 6 (lower is better)
Translates to: VSTWSLGHRWLL*LSGCYPSEFIP
Trigger: CGGGATGAACTCTGAGGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CAA 72 bp AGCCACTCCCGCAGCACAGTTGACGTGTTATCCATGTaGTGGTCCGTAGCCACCCATAGCGCCGTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SHSRSTVDVLSM*WSVATHSAVRS
Trigger: GGAGCGCACGGCGCTATGGGTGGCTACGGACCACAACATGGATAACACGTCAACTGTGCTGCGGGAGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CAA 90 bp TTGGAGTACGCAGCCCGGGAATCCAGCATGGGGGCGACCACCGTCTaGTTCTCAGCGATGAGCAGGCTCAGTGTGTCAGGGTTGAGGATC +
Preference number: 6 (lower is better)
Translates to: LEYAARESSMGATTV*FSAMSRLSVSGLRI
Trigger: GATCCTCAACCCTGACACACTGAGCCTGCTCATCGCTGAGAACAAGACGGTGGTCGCCCCCATGCTGGATTCCCGGGCTGCGTACTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252599.9
ENST00000600474.1
ENST00000601354.1
CDS GCA 72 bp CAGGCCTCAGTCAAGTCTCTAAGCCTTGACCAAGCCTaGAGGCTTCCGGCCAGGTCCCTTGAGTTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: QASVKSLSLDQA*RLPARSLEFWV
Trigger: CACCCAGAACTCAAGGGACCTGGCCGGAAGCCTGCAGGCTTGGTCAAGGCTTAGAGACTTGACTGAGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS GCA 72 bp GCATGTTTGCAGAGCTCTGTGACTGGATGGAGTGAATaGAGGAGCCCAGGGGTCTGGCGGTCATGGGGGAGA +
Preference number: 6 (lower is better)
Translates to: ACLQSSVTGWSE*RSPGVWRSWGR
Trigger: TCTCCCCCATGACCGCCAGACCCCTGGGCTCCTGCATTCACTCCATCCAGTCACAGAGCTCTGCAAACATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CAA 72 bp AGTAAGCACGTGGAGCCTGGGCCACCGATGGCTGCTTaGGCTTTCTGGCTGCTACCCCTCAGAGTTCATCCC +
Preference number: 6 (lower is better)
Translates to: SKHVEPGPPMAA*AFWLLPLRVHP
Trigger: GGGATGAACTCTGAGGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CAA 90 bp AGCCCACTTACAGAAGAGAAGGACGGCTCCAGTGCTGGAAACATGTaGGTGGCACTCCCATCCAGGGGCTTGTCTAAGACCAGGCGCCCT +
Preference number: 6 (lower is better)
Translates to: SPLTEEKDGSSAGNM*VALPSRGLSKTRRP
Trigger: AGGGCGCCTGGTCTTAGACAAGCCCCTGGATGGGAGTGCCACCAACATGTTTCCAGCACTGGAGCCGTCCTTCTCTTCTGTAAGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS TCA 72 bp GCATCTTCTGGGACTTGGCGCGGTCCCAGTCGGTCTTaGCGTGCTCATTGTTCCATACGACTGAGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: ASSGTWRGPSRS*RAHCSIRLRSR
Trigger: CCGAGACCTCAGTCGTATGGAACAATGAGCACGTCAAGACCGACTGGGACCGCGCCAAGTCCCAGAAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CAA 72 bp CGCATCTTCTGGGACTTGGCGCGGTCCCAGTCGGTCTaGACGTGCTCATTGTTCCATACGACTGAGGTCTCG +
Preference number: 6 (lower is better)
Translates to: RIFWDLARSQSV*TCSLFHTTEVS
Trigger: CGAGACCTCAGTCGTATGGAACAATGAGCACGTCAAGACCGACTGGGACCGCGCCAAGTCCCAGAAGATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS GCA 72 bp TTCTGGGACTTGGCGCGGTCCCAGTCGGTCTTGACGTaGTCATTGTTCCATACGACTGAGGTCTCGGTGTCA +
Preference number: 6 (lower is better)
Translates to: FWDLARSQSVLT*SLFHTTEVSVS
Trigger: TGACACCGAGACCTCAGTCGTATGGAACAATGAGCACGTCAAGACCGACTGGGACCGCGCCAAGTCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS CCA 72 bp CTCATCCTGGAGGGTGCTGTGGGCGCGCAATGGCACTaGCAAGAATCCGTACTCCTCCTTGTTGCACACATA +
Preference number: 6 (lower is better)
Translates to: LILEGAVGAQWH*QESVLLLVAHI
Trigger: TATGTGTGCAACAAGGAGGAGTACGGATTCTTGCCAGTGCCATTGCGCGCCCACAGCACCCTCCAGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252599.9
CDS CCA 72 bp AAGAGAAGGACGGCTCCAGTGCTGGAAACATGTTGGTaGCACTCCCATCCAGGGGCTTGTCTAAGACCAGGC +
Preference number: 6 (lower is better)
Translates to: KRRTAPVLETCW*HSHPGACLRPG
Trigger: GCCTGGTCTTAGACAAGCCCCTGGATGGGAGTGCCACCAACATGTTTCCAGCACTGGAGCCGTCCTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CCA 72 bp CAGCCCACTTACAGAAGAGAAGGACGGCTCCAGTGCTaGAAACATGTTGGTGGCACTCCCATCCAGGGGCTT +
Preference number: 6 (lower is better)
Translates to: QPTYRREGRLQC*KHVGGTPIQGL
Trigger: AAGCCCCTGGATGGGAGTGCCACCAACATGTTTCCAGCACTGGAGCCGTCCTTCTCTTCTGTAAGTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CAA 72 bp AGCCACTCCCGCAGCACAGTTGACGTGTTATCCATGTaGTGGTCCGTAGCCACCCTTGGCCTCCCAAATTGC +
Preference number: 6 (lower is better)
Translates to: SHSRSTVDVLSM*WSVATLGLPNC
Trigger: GCAATTTGGGAGGCCAAGGGTGGCTACGGACCACAACATGGATAACACGTCAACTGTGCTGCGGGAGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600474.1
CDS TCA 72 bp CTCGAGCTGATTTCAGGGCTGCCTGGCGCAACTTCATaGCATGCTCGTAGCGTGAGTCAGACCAGTGTTTCG +
Preference number: 6 (lower is better)
Translates to: LELISGLPGATS*HARSVSQTSVS
Trigger: CGAAACACTGGTCTGACTCACGCTACGAGCATGTCATGAAGTTGCGCCAGGCAGCCCTGAAATCAGCTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000600474.1
CDS CCA 72 bp CAGAAGAGAAGGACGGCTCCAGTGCTGGAAACATGTTaGTGGCACTCCCATCCAGGGGCTTGTCTAAGACCA +
Preference number: 6 (lower is better)
Translates to: QKRRTAPVLETC*WHSHPGACLRP
Trigger: TGGTCTTAGACAAGCCCCTGGATGGGAGTGCCACCAACATGTTTCCAGCACTGGAGCCGTCCTTCTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CAA 72 bp ACAGAAGAGAAGGACGGCTCCAGTGCTGGAAACATGTaGGTGGCACTCCCATCCAGGGGCTTGTCTAAGACC +
Preference number: 6 (lower is better)
Translates to: TEEKDGSSAGNM*VALPSRGLSKT
Trigger: GGTCTTAGACAAGCCCCTGGATGGGAGTGCCACCAACATGTTTCCAGCACTGGAGCCGTCCTTCTCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593832.1
CDS CAA 72 bp ATGAGCAGGCTCAGTGTGTCAGGGTTGAGGATCAGGTaGTCCGCATCTACAAACAGGTTGGCCAGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: MSRLSVSGLRIR*SASTNRLARLV
Trigger: GACCAGCCTGGCCAACCTGTTTGTAGATGCGGACAACCTGATCCTCAACCCTGACACACTGAGCCTGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601354.1
CDS TCA 72 bp CCAGTCGGTCTTGACGTGCTCATTGTTCCATACGACTaGGGTCTCGGTGTCACTCACATAGCCATCGTCTCC +
Preference number: 6 (lower is better)
Translates to: PVGLDVLIVPYD*GLGVTHIAIVS
Trigger: GGAGACGATGGCTATGTGAGTGACACCGAGACCTCAGTCGTATGGAACAATGAGCACGTCAAGACCGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000593832.1
CDS TCA 72 bp TACAAACAGGATGTAATCAGCCCACATGTCTCGAGCTaGTTTCAGGGCTGCCTGGCGCAACTTCATGACATG +
Preference number: 6 (lower is better)
Translates to: YKQDVISPHVSS*FQGCLAQLHDM
Trigger: CATGTCATGAAGTTGCGCCAGGCAGCCCTGAAATCAGCTCGAGACATGTGGGCTGATTACATCCTGTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252599.9
ENST00000600474.1