RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COLEC12 (Homo sapiens)

Ensembl gene IDs: ENSG00000158270

Ensembl transcript IDs: ENST00000400256.5, ENST00000582147.1

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCCCACCTGCCTaGCAGCAGGGCACACAGGTGCTGAGCAGTTGGCCATTACTGGGC +
Preference number: 1 (lower is better)
Translates to: RLQQFRPRGLWVPPA*QQGTQVLSSWPLLG
Trigger: GCCCAGTAATGGCCAACTGCTCAGCACCTGTGTGCCCTGCTGTCAGGCAGGTGGGACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR GCA 90 bp CTGTTGAGCCTGAAGAGGTGTTGGAATGCCGTGCCCGCCTTGTGGTaGAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCCCACCT +
Preference number: 1 (lower is better)
Translates to: LLSLKRCWNAVPALW*RLQQFRPRGLWVPP
Trigger: AGGTGGGACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCACGGCATTCCAACACCTCTTCAGGCTCAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CCA 90 bp AGGCTGTTGAGCCTGAAGAGGTGTTGGAATGCCGTGCCCGCCTTGTaGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCCCA +
Preference number: 1 (lower is better)
Translates to: RLLSLKRCWNAVPAL*CRLQQFRPRGLWVP
Trigger: TGGGACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCACGGCATTCCAACACCTCTTCAGGCTCAACAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CCA 90 bp GTTGCCCATTTCTTCTGTGTCTGGTCAGGCACACGTCAAGAATGTTaGCTGGTGATGGGCTCAAGGCAGGCACAGCCCGCTTCACTGTGC +
Preference number: 1 (lower is better)
Translates to: VAHFFCVWSGTRQEC*LVMGSRQAQPASLC
Trigger: GCACAGTGAAGCGGGCTGTGCCTGCCTTGAGCCCATCACCAGCCAACATTCTTGACGTGTGCCTGACCAGACACAGAAGAAATGGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR TCA 90 bp ATTTCTTCTGTGTCTGGTCAGGCACACGTCAAGAATGTTGGCTGGTaGTGGGCTCAAGGCAGGCACAGCCCGCTTCACTGTGCATGTGTG +
Preference number: 1 (lower is better)
Translates to: ISSVSGQAHVKNVGW*WAQGRHSPLHCACV
Trigger: CACACATGCACAGTGAAGCGGGCTGTGCCTGCCTTGAGCCCATCACCAGCCAACATTCTTGACGTGTGCCTGACCAGACACAGAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR GCA 90 bp TGTTGGCTGGTGATGGGCTCAAGGCAGGCACAGCCCGCTTCACTGTaGATGTGTGCAGGCTTGATTGACACTGGCAAAATCTGCAAGGAT +
Preference number: 1 (lower is better)
Translates to: CWLVMGSRQAQPASL*MCAGLIDTGKICKD
Trigger: ATCCTTGCAGATTTTGCCAGTGTCAATCAAGCCTGCACACATGCACAGTGAAGCGGGCTGTGCCTGCCTTGAGCCCATCACCAGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CCA 90 bp GATGCCTCTCCATCCCCCACACCTCCCGACTCCACCAAAATGAAGTaGAAGCACGTCTTGAGTTGCCCATTTCTTCTGTGTCTGGTCAGG +
Preference number: 1 (lower is better)
Translates to: DASPSPTPPDSTKMK*KHVLSCPFLLCLVR
Trigger: CCTGACCAGACACAGAAGAAATGGGCAACTCAAGACGTGCTTCCACTTCATTTTGGTGGAGTCGGGAGGTGTGGGGGATGGAGAGGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR TCA 90 bp TGGCTCTGTAGGGATCTGATGCCAAGTACAGTCATAGCTCAGCCATaGCACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAA +
Preference number: 1 (lower is better)
Translates to: WLCRDLMPSTVIAQP*HRAFQIGQIQCPSQ
Trigger: TTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGTCATGGCTGAGCTATGACTGTACTTGGCATCAGATCCCTACAGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CCA 90 bp AGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGGAATaGAGACTGTGGGCAAAGCAGTACAGTCCACTTGTTCGCAGGTGG +
Preference number: 1 (lower is better)
Translates to: SSWPLLGCENSMNGE*RLWAKQYSPLVRRW
Trigger: CCACCTGCGAACAAGTGGACTGTACTGCTTTGCCCACAGTCTCCATTCCCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR TCA 90 bp GCTCAAGGCAGGCACAGCCCGCTTCACTGTGCATGTGTGCAGGCTTaGTTGACACTGGCAAAATCTGCAAGGATATTTCTAGACATTCCA +
Preference number: 1 (lower is better)
Translates to: AQGRHSPLHCACVQA*LTLAKSARIFLDIP
Trigger: TGGAATGTCTAGAAATATCCTTGCAGATTTTGCCAGTGTCAATCAAGCCTGCACACATGCACAGTGAAGCGGGCTGTGCCTGCCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR GCA 90 bp ACACCTCCCGACTCCACCAAAATGAAGTGGAAGCACGTCTTGAGTTaGCCATTTCTTCTGTGTCTGGTCAGGCACACGTCAAGAATGTTG +
Preference number: 1 (lower is better)
Translates to: TPPDSTKMKWKHVLS*PFLLCLVRHTSRML
Trigger: CAACATTCTTGACGTGTGCCTGACCAGACACAGAAGAAATGGGCAACTCAAGACGTGCTTCCACTTCATTTTGGTGGAGTCGGGAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CCA 90 bp CCATTACTGGGCTGTGAAAACAGCATGAATGGGGAATGGAGACTGTaGGCAAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAA +
Preference number: 1 (lower is better)
Translates to: PLLGCENSMNGEWRL*AKQYSPLVRRWESQ
Trigger: TTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTTGCCCACAGTCTCCATTCCCCATTCATGCTGTTTTCACAGCCCAGTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR TCA 90 bp AAGACCTGCTTCCTAGGGCTGTTGGGAGGATCAGGTGAGACAATCTaGTTGAAGGACTTGGACCAGTGCCTGATAAATAATAAGCACTTG +
Preference number: 1 (lower is better)
Translates to: KTCFLGLLGGSGETI*LKDLDQCLINNKHL
Trigger: CAAGTGCTTATTATTTATCAGGCACTGGTCCAAGTCCTTCAATCAGATTGTCTCACCTGATCCTCCCAACAGCCCTAGGAAGCAGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCAGTAGCAGCACTGCCTaGGAAGACCCTTGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVSSSTA*EDPWEG
Trigger: TCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACT...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR TCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCAAGAATGTTGGCTGGTaGTGGGCTCAAGGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVKNVGW*WAQGRH
Trigger: GTGCCTGCCTTGAGCCCATCACCAGCCAACATTCTT...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR GCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTTCACCGAGGCTGGAGTaGAGTGGTGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: GISSSTAWEDPWEGEGICSPRLE*SGAILA
Trigger: AGCCAAGATCGCACCACTGCACTCCAGCCTCGGTGA...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CAA 90 bp AGTTGCCCATTTCTTCTGTGTCTGGTCAGGCACACGTCAAGAATGTaGGCTGGTGATGGGCTCAAGGCAGGCACAGCCCGCTTCACTGTG +
Preference number: 2 (lower is better)
Translates to: SCPFLLCLVRHTSRM*AGDGLKAGTARFTV
Trigger: CACAGTGAAGCGGGCTGTGCCTGCCTTGAGCCCATCACCAGCCAACATTCTTGACGTGTGCCTGACCAGACACAGAAGAAATGGGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CAA 90 bp TCCCCCACACCTCCCGACTCCACCAAAATGAAGTGGAAGCACGTCTaGAGTTGCCCATTTCTTCTGTGTCTGGTCAGGCACACGTCAAGA +
Preference number: 2 (lower is better)
Translates to: SPTPPDSTKMKWKHV*SCPFLLCLVRHTSR
Trigger: TCTTGACGTGTGCCTGACCAGACACAGAAGAAATGGGCAACTCAAGACGTGCTTCCACTTCATTTTGGTGGAGTCGGGAGGTGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTACACGTCAAGAATGTTaGCTGGTGATGGGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASTRQEC*LVMGSR
Trigger: CCTTGAGCCCATCACCAGCCAACATTCTTGACGTGT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR TCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGTGCCTTTGGCTGATGTaGCGCCATACGTTCCTGACA +
Preference number: 2 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGCLWLM*RHTFLT
Trigger: TGTCAGGAACGTATGGCGTCACATCAGCCAAAGGCA...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR TCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGATCTCTGCCTTTGGCTaGTGTGACGCCATACGTTCC +
Preference number: 2 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGISAFG*CDAIRS
Trigger: GGAACGTATGGCGTCACATCAGCCAAAGGCAGAGAT...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR GCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGAAGAGGTGTTGGAATaGCGTGCCCGCCTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEEEVLE*RARLVV
Trigger: CACCACAAGGCGGGCACGGCATTCCAACACCTCTTC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CAA 90 bp GGCTCAAGGCAGGCACAGCCCGCTTCACTGTGCATGTGTGCAGGCTaGATTGACACTGGCAAAATCTGCAAGGATATTTCTAGACATTCC +
Preference number: 2 (lower is better)
Translates to: GSRQAQPASLCMCAG*IDTGKICKDISRHS
Trigger: GGAATGTCTAGAAATATCCTTGCAGATTTTGCCAGTGTCAATCAAGCCTGCACACATGCACAGTGAAGCGGGCTGTGCCTGCCTTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTTCCACCAAAATGAAGTaGAAGCACGTCTTGAGTTGC +
Preference number: 2 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASSTKMK*KHVLSC
Trigger: GCAACTCAAGACGTGCTTCCACTTCATTTTGGTGGA...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CAA 90 bp CACACCTCCCGACTCCACCAAAATGAAGTGGAAGCACGTCTTGAGTaGCCCATTTCTTCTGTGTCTGGTCAGGCACACGTCAAGAATGTT +
Preference number: 2 (lower is better)
Translates to: HTSRLHQNEVEARLE*PISSVSGQAHVKNV
Trigger: AACATTCTTGACGTGTGCCTGACCAGACACAGAAGAAATGGGCAACTCAAGACGTGCTTCCACTTCATTTTGGTGGAGTCGGGAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGCCACTTGTTCGCAGGTaGGAAAGTCAAACTCTGTCT +
Preference number: 2 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGPLVRR*ESQTLS
Trigger: AGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGG...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGCATTTCTTCTGTGTCTaGTCAGGCACACGTCAAGAA +
Preference number: 2 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGHFFCV*SGTRQE
Trigger: TTCTTGACGTGTGCCTGACCAGACACAGAAGAAATG...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR TCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGAGTCCATGTGCACAATaGAAATCAGCATATCACCCT +
Preference number: 2 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGSPCAQ*KSAYHP
Trigger: AGGGTGATATGCTGATTTTCATTGTGCACATGGACT...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR GCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTCAGCCCGCTTCACTGTaGATGTGTGCAGGCTTGATT +
Preference number: 2 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIQPASL*MCAGLI
Trigger: AATCAAGCCTGCACACATGCACAGTGAAGCGGGCTG...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR GCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGGTGATTCAGTCCATGTaGACAATGAAAATCAGCATA +
Preference number: 2 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGVIQSM*TMKISI
Trigger: TATGCTGATTTTCATTGTGCACATGGACTGAATCAC...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR GCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGGACACTGGCAAAATCTaGAAGGATATTTCTAGACAT +
Preference number: 2 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGDTGKI*KDISRH
Trigger: ATGTCTAGAAATATCCTTGCAGATTTTGCCAGTGTC...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR TCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTGTGTGCAGGCTTGATTaGCACTGGCAAAATCTGCAA +
Preference number: 2 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIVCRLD*HWQNLQ
Trigger: TTGCAGATTTTGCCAGTGTCAATCAAGCCTGCACAC...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR TCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGTTTGCCTTTGAGAGCTaGAAATTTGCTCATGTGATC +
Preference number: 2 (lower is better)
Translates to: RIYVIQSMCTMKISISPWFAFES*KFAHVI
Trigger: GATCACATGAGCAAATTTTCAGCTCTCAAAGGCAAA...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTATCATGCGTATGCCTTaGAGTTATGTTTTTGGAATA +
Preference number: 2 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIIMRMP*SYVFGI
Trigger: TATTCCAAAAACATAACTCCAAGGCATACGCATGAT...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR GCA 72 bp CTGAAGAGGTGTTGGAATGCCGTGCCCGCCTTGTGGTaGAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGG +
Preference number: 3 (lower is better)
Translates to: LKRCWNAVPALW*RLQQFRPRGLW
Trigger: CCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCACGGCATTCCAACACCTCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CCA 72 bp AGCCTGAAGAGGTGTTGGAATGCCGTGCCCGCCTTGTaGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTG +
Preference number: 3 (lower is better)
Translates to: SLKRCWNAVPAL*CRLQQFRPRGL
Trigger: CAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCACGGCATTCCAACACCTCTTCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CAA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCCACACGTCAAGAATGTaGGCTGGTGATGGGCTCAAG +
Preference number: 3 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVHTSRM*AGDGLK
Trigger: CTTGAGCCCATCACCAGCCAACATTCTTGACGTGTG...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR TCA 72 bp GTGTCTGGTCAGGCACACGTCAAGAATGTTGGCTGGTaGTGGGCTCAAGGCAGGCACAGCCCGCTTCACTGT +
Preference number: 3 (lower is better)
Translates to: VSGQAHVKNVGW*WAQGRHSPLHC
Trigger: ACAGTGAAGCGGGCTGTGCCTGCCTTGAGCCCATCACCAGCCAACATTCTTGACGTGTGCCTGACCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CAA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCAAGTGGAAGCACGTCTaGAGTTGCCCATTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVKWKHV*SCPFLL
Trigger: CAGAAGAAATGGGCAACTCAAGACGTGCTTCCACTT...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR GCA 72 bp CCTCTAAAGGCTGTTGAGCCTGAAGAGGTGTTGGAATaGCGTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTT +
Preference number: 3 (lower is better)
Translates to: PLKAVEPEEVLE*RARLVVQASAV
Trigger: AACTGCTGAAGCCTGCACCACAAGGCGGGCACGGCATTCCAACACCTCTTCAGGCTCAACAGCCTTTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR GCA 72 bp GTGATGGGCTCAAGGCAGGCACAGCCCGCTTCACTGTaGATGTGTGCAGGCTTGATTGACACTGGCAAAATC +
Preference number: 3 (lower is better)
Translates to: VMGSRQAQPASL*MCAGLIDTGKI
Trigger: GATTTTGCCAGTGTCAATCAAGCCTGCACACATGCACAGTGAAGCGGGCTGTGCCTGCCTTGAGCCCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR TCA 72 bp AGGGATCTGATGCCAAGTACAGTCATAGCTCAGCCATaGCACAGGGCCTTCCAGATAGGCCAGATTCAGTGC +
Preference number: 3 (lower is better)
Translates to: RDLMPSTVIAQP*HRAFQIGQIQC
Trigger: GCACTGAATCTGGCCTATCTGGAAGGCCCTGTGTCATGGCTGAGCTATGACTGTACTTGGCATCAGATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR TCA 72 bp ACTCTCCACTCCAAAAGAGCATCAGTTGTGTGTAGGTaGATAGAAAGCTGGTGTGTAGGCCGGGCACGGTGG +
Preference number: 3 (lower is better)
Translates to: TLHSKRASVVCR*IESWCVGRARW
Trigger: CCACCGTGCCCGGCCTACACACCAGCTTTCTATTCACCTACACACAACTGATGCTCTTTTGGAGTGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CAA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGTGCATGTGTGCAGGCTaGATTGACACTGGCAAAATC +
Preference number: 3 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGCMCAG*IDTGKI
Trigger: GATTTTGCCAGTGTCAATCAAGCCTGCACACATGCA...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR GCA 72 bp GACTCCACCAAAATGAAGTGGAAGCACGTCTTGAGTTaGCCATTTCTTCTGTGTCTGGTCAGGCACACGTCA +
Preference number: 3 (lower is better)
Translates to: DSTKMKWKHVLS*PFLLCLVRHTS
Trigger: TGACGTGTGCCTGACCAGACACAGAAGAAATGGGCAACTCAAGACGTGCTTCCACTTCATTTTGGTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR TCA 72 bp AGGCACAGCCCGCTTCACTGTGCATGTGTGCAGGCTTaGTTGACACTGGCAAAATCTGCAAGGATATTTCTA +
Preference number: 3 (lower is better)
Translates to: RHSPLHCACVQA*LTLAKSARIFL
Trigger: TAGAAATATCCTTGCAGATTTTGCCAGTGTCAATCAAGCCTGCACACATGCACAGTGAAGCGGGCTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CCA 72 bp CCATTACTGGGCTGTGAAAACAGCATGAATGGGGAATaGAGACTGTGGGCAAAGCAGTACAGTCCACTTGTT +
Preference number: 3 (lower is better)
Translates to: PLLGCENSMNGE*RLWAKQYSPLV
Trigger: AACAAGTGGACTGTACTGCTTTGCCCACAGTCTCCATTCCCCATTCATGCTGTTTTCACAGCCCAGTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CAA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGAGAAAGGAGTGTCCTTaGCCTTTGAGAGCTGAAAAT +
Preference number: 3 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGRKECP*PLRAEN
Trigger: ATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCT...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CAA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTCCATTATTGTTTTCTTaGGCTCCATGTATTATGTCG +
Preference number: 3 (lower is better)
Translates to: GISSSTAWEDPWEGEGICPLLFS*APCIMS
Trigger: CGACATAATACATGGAGCCAAAGAAAACAATAATGG...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CCA 72 bp TTTACCATTTTATTTGGGATAAGTAGCAGCACTGCCTaGGAAGACCCTTGGGAGGGAGAAGGAATCTGTTGG +
Preference number: 3 (lower is better)
Translates to: FTILFGISSSTA*EDPWEGEGICW
Trigger: CCAACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCCAAATAAAATGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR-3UTR CAA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAATATCATGCGTATGCCTaGGAGTTATGTTTTTGGAAT +
Preference number: 3 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEYHAYA*ELCFWN
Trigger: ATTCCAAAAACATAACTCCAAGGCATACGCATGATA...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTGGGCACCACCGCTCCTaGTGGGCCAGGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICGHHRS*WARRAG
Trigger: CCCGGCCCTCCTGGCCCATCAGGAGCGGTGGTGCCC...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCAGTCGTCTTTCATGGTaGCCGTGGGGACGCACCGCC +
Preference number: 4 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVSRLSW*PWGRTA
Trigger: GGCGGTGCGTCCCCACGGTCACCATGAAAGACGACT...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCGGTGTTGGAATGCCGTaGCCGCCTTGTGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVGVGMP*PPCGAG
Trigger: GCCTGCACCACAAGGCGGGCACGGCATTCCAACACC...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCAGCACAGTCTTCTCCTaGCCCATGGCCATGACCCCA +
Preference number: 4 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVSTVFS*PMAMTP
Trigger: TGGGGTCATGGCCATGGGCCAGGAGAAGACTGTGCT...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCTGCCCTGGAGCACGCTaGTATCTTGCTGCAGATTCG +
Preference number: 4 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVCPGAR*YLAADS
Trigger: CGAATCTGCAGCAAGATACCAGCGTGCTCCAGGGCA...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTCTCCGGTGCTGGGGTTaGCTCATTCTGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASLRCWG*LILQGQ
Trigger: CTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAG...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTGCCCTTCCCAACAGATaGCTCTCCATCCCCCACACC +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASALPNR*LSIPHT
Trigger: GGTGTGGGGGATGGAGAGGCATCTGTTGGGAAGGGC...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTACTGTGGGTCCCACCTaGCTGACAGCAGGGCACACA +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASTVGPT*LTAGHT
Trigger: TGTGTGCCCTGCTGTCAGGCAGGTGGGACCCACAGT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTACCAGCTGGTCCAATTaGGCCTCTCTCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASTSWSN*ASLTRR
Trigger: CCTGCGGGTGAGAGAGGCCCAATTGGACCAGCTGGT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGTACCCCAGGCAAGCCTaGCAGTCCCCGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGYPRQA*QSPRSR
Trigger: CCTGGACCTCGGGGACTGCCAGGCTTGCCTGGGGTA...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCAGCATGAATGGGGAATaGAGACTGTGGGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVSMNGE*RLWAKQ
Trigger: CTGCTTTGCCCACAGTCTCCATTCCCCATTCATGCT...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CAA 72 bp TTGAGCCTGAAGAGGTGTTGGAATGCCGTGCCCGCCTaGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSLKRCWNAVPA*WCRLQQFRPRG
Trigger: TCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCACGGCATTCCAACACCTCTTCAGGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCGAATACATTTGGTTCTaGAGATTGCCCTGGAGCACG +
Preference number: 4 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVEYIWF*RLPWST
Trigger: CGTGCTCCAGGGCAATCTGCAGAACCAAATGTATTC...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTCTTTCTGTCCCTTGTTaGCAGTTGGGCCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICLSVPC*QLGQGV
Trigger: GACCCCCTGGCCCAACTGGCAACAAGGGACAGAAAG...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTGTGCCCGCCTTGTGGTaGAGGCTTCAGCAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICVPALW*RLQQFR
Trigger: CCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCTCGTTCTTGATTCGCTaGATAGCCTGGCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVSFLIR*IAWLVS
Trigger: TGACACAAGCCAGGCTATCCAGCGAATCAAGAACGA...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGGGGCCTGGCATGCCTaGTACCCCAGGCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEGAWHA*YPRQAW
Trigger: CCAGGCTTGCCTGGGGTACCAGGCATGCCAGGCCCC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTGTGAGGCCGATCCAGTaGCTCTCTCTCCCTACCATC +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICVRPIQ*LSLPTI
Trigger: GATGGTAGGGAGAGAGAGCCACTGGATCGGCCTCAC...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTAGTAGCAGCACTGCCTaGGAAGACCCTTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASSSSTA*EDPWEG
Trigger: TCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCCCACTTGTTCGCAGGTaGGAAAGTCAAACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVPLVRR*ESQTLS
Trigger: AGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGG...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTAGCCTGAAGAGGTGTTaGAATGCCGTGCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASSLKRC*NAVPAL
Trigger: CAAGGCGGGCACGGCATTCCAACACCTCTTCAGGCT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CAA 72 bp TTTCTTCTGTGTCTGGTCAGGCACACGTCAAGAATGTaGGCTGGTGATGGGCTCAAGGCAGGCACAGCCCGC +
Preference number: 4 (lower is better)
Translates to: FLLCLVRHTSRM*AGDGLKAGTAR
Trigger: GCGGGCTGTGCCTGCCTTGAGCCCATCACCAGCCAACATTCTTGACGTGTGCCTGACCAGACACAGAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTCTGGTCTCGAACTCCTaGCCTCAAGTCATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICLVSNS*PQVICL
Trigger: CAGGCAGATGACTTGAGGTCAGGAGTTCGAGACCAG...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGGGCGGGAGAGTCGCTTaGACCTGGGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGGGRVA*TWEAEI
Trigger: AATCTCTGCCTCCCAGGTTCAAGCGACTCTCCCGCC...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCTCTTTGTGTAAGTCCTaGAGGTCTTTCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVSLCKS*RSFRFC
Trigger: GCAGAACCTGAAAGACCTGCAGGACTTACACAAAGA...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTGAGCCTTTGGGGCCCTaGGAGCCTTTAGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASEPLGP*EPLDPL
Trigger: CAAAGGATCTAAAGGCTCCCAGGGCCCCAAAGGCTC...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTATTGTCCTCCGGTGCTaGGGTTGGCTCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASIVLRC*GWLILQ
Trigger: CTGCAGAATGAGCCAACCCCAGCACCGGAGGACAAT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTCAGCCCGCTTCACTGTaGATGTGTGCAGGCTTGATT +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICQPASL*MCAGLI
Trigger: AATCAAGCCTGCACACATGCACAGTGAAGCGGGCTG...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGTCACCGAGGCTGGAGTaGAGTGGTGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGSPRLE*SGAILA
Trigger: AGCCAAGATCGCACCACTGCACTCCAGCCTCGGTGA...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGGAAGAGGTGTTGGAATaGCGTGCCCGCCTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGEEVLE*RARLVV
Trigger: CACCACAAGGCGGGCACGGCATTCCAACACCTCTTC...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTGTCGTCCCGAGCGGCTaGTCACCGCACGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIVVPSG*SPHAHG
Trigger: ACCATGGGCGTGCGGTGAGCAGCCGCTCGGGACGAC...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTAGCGTCTGCAAGCTCTaGACTTTCTCCTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICSVCKL*TFSFSQ
Trigger: TTGGCTGAAGGAGAAAGTGCAGAGCTTGCAGACGCT...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTGAGTGTAGTAAGACCTaGTTCCTAGGGCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICECSKT*FLGLLG
Trigger: TCCCAACAGCCCTAGGAAGCAGGTCTTACTACACTC...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTATTCGCTGGATAGCCTaGCTTGTGTCATCCACAGAC +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASIRWIA*LVSSTD
Trigger: GTCTGTGGATGACACAAGCCAGGCTATCCAGCGAAT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCACCCGCAGGGCCAGGTaGTCCAGGCTCCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GDAIRKECPLPLRAENLLTRRAR*SRLPLL
Trigger: GAGAAGGGGGAGCCTGGACCACCTGGCCCTGCGGGT...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTAGTTTGAGACCAGCCTaGCCAAAATGGCGAAACCGT +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICSLRPA*PKWRNR
Trigger: ACGGTTTCGCCATTTTGGCCAGGCTGGTCTCAAACT...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CAA 72 bp CCTCCCGACTCCACCAAAATGAAGTGGAAGCACGTCTaGAGTTGCCCATTTCTTCTGTGTCTGGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PPDSTKMKWKHV*SCPFLLCLVRH
Trigger: GTGCCTGACCAGACACAGAAGAAATGGGCAACTCAAGACGTGCTTCCACTTCATTTTGGTGGAGTCGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTCATCTGACCTGTGAATaGGTTGAGCTGGCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASHLTCE*VELAVH
Trigger: ATGAACAGCCAGCTCAACTCATTCACAGGTCAGATG...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGTGAAGTTCTTCCAGTaGGGCGGGCAGCCATTGTCC +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEVKFFQ*GGQPLS
Trigger: GGACAATGGCTGCCCGCCTCACTGGAAGAACTTCAC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTGTGTGCAGGCTTGATTaGCACTGGCAAAATCTGCAA +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICVCRLD*HWQNLQ
Trigger: TTGCAGATTTTGCCAGTGTCAATCAAGCCTGCACAC...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGTTCTGCAGATTGCCCTaGAGCACGCTGGTATCTTGC +
Preference number: 4 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGFCRLP*STLVSC
Trigger: GCAAGATACCAGCGTGCTCCAGGGCAATCTGCAGAA...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTCACTTTCCACTGCTGTaGGCTTGTCATCATAGGTTT +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICHFPLL*ACHHRF
Trigger: AAACCTATGATGACAAGCTCACAGCAGTGGAAAGTG...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGGTGAGACAATCTGATTaGAGGACTTGGACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGVRQSD*RTWTSA
Trigger: GGCACTGGTCCAAGTCCTTCAATCAGATTGTCTCAC...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTAGCAACTCAGGTGCCTaGAGACCCCATCATATTTTA +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASSNSGA*RPHHIL
Trigger: TAAAATATGATGGGGTCTTCAGGCACCTGAGTTGCT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGTGATGAGGTTCCTCTaGTGCACCTGGGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEVMRFL*CTWVRF
Trigger: GAACCTGACCCAGGTGCAGCAGAGGAACCTCATCAC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAATTGGCAGCCAGCGTCTaGAAGCTCTGCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQELAASV*KLCTFS
Trigger: GGAGAAAGTGCAGAGCTTGCAGACGCTGGCTGCCAA...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGCCTTGGGGCCTGGCATaGCTGGTACCCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWPWGLA*LVPQAS
Trigger: GCTTGCCTGGGGTACCAGGCATGCCAGGCCCCAAGG...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGGGGGTTGGCTCATTCTaGAGGGCCAGGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEGVGSF*RARGTT
Trigger: GGTGGTGCCCCTGGCCCTGCAGAATGAGCCAACCCC...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGTCCTCTGTCACCTCTTaGACCCCTGGGGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEESSVTS*TPGARW
Trigger: CCACCGGGCCCCAGGGGTCCAAGAGGTGACAGAGGA...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTGGGCCAGGGGGTCCCTaGGATCCTCTGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIGPGGP*DPLSPL
Trigger: AAGAGGTGACAGAGGATCCCAGGGACCCCCTGGCCC...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTCCAATTTTTGTAGTCTaGAGATGTCCCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICPIFVV*RCPIQP
Trigger: TGGCTGGATGGGACATCTCCAGACTACAAAAATTGG...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTTTTCCATGCCACCTGTaGCATTGTCCATTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASFPCHL*HCPFSL
Trigger: TAGAGAAAATGGACAATGTCACAGGTGGCATGGAAA...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTAAAGTTTCTTTCAATTaGCTCTGCCTGTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICKVSFN*LCLSTR
Trigger: TCTGGTGGACAGGCAGAGTCAATTGAAAGAAACTTT...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGTCCCCAACGGTGCCCTaGAGTCCCTGGAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEESPTVP*SPWKPG
Trigger: TCCTGGCTTCCAGGGACTTCAGGGCACCGTTGGGGA...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGCCTGGCCCATGGCCATaGCCCCAGTTATCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEPGPWP*PQLSGC
Trigger: ACAGCCGGATAACTGGGGTCATGGCCATGGGCCAGG...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTAAACCAGGAAGAGCATaGAAAAGAGGACTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICKPGRA*KRGLSV
Trigger: TACACTGAGTCCTCTTTTTCATGCTCTTCCTGGTTT...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGAGGCAGAGATTGCAGTaGGCCGAGATCGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEERQRLQ*AEIAPP
Trigger: CGGTGGCGCGATCTCGGCTCACTGCAATCTCTGCCT...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGCAGGCTCCCCAACGGTaGCCTGAAGTCCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEQAPQR*PEVPGS
Trigger: GCTTCCAGGGACTTCAGGGCACCGTTGGGGAGCCTG...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGCACCTCTTGGACCCCTaGGGCCCGGTGGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEHLLDP*GPVDLV
Trigger: TACAAGGTCCACCGGGCCCCAGGGGTCCAAGAGGTG...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAACAGGTGCTGAGCAGTTaGCCATTACTGGGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEQVLSS*PLLGCE
Trigger: TTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTG...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CAA 72 bp CAGGCACAGCCCGCTTCACTGTGCATGTGTGCAGGCTaGATTGACACTGGCAAAATCTGCAAGGATATTTCT +
Preference number: 4 (lower is better)
Translates to: QAQPASLCMCAG*IDTGKICKDIS
Trigger: AGAAATATCCTTGCAGATTTTGCCAGTGTCAATCAAGCCTGCACACATGCACAGTGAAGCGGGCTGTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGCACGCTCTGAGTCTGTaGGGCCGATCCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEHALSL*GRSSGS
Trigger: AGAGCCACTGGATCGGCCTCACAGACTCAGAGCGTG...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCATGGTCTCGATCTCCTaGCCTTGTGATCCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: GDAIRKECPLPLRAENLLMVSIS*PCDPSA
Trigger: GGCGGACGGATCACAAGGTCAGGAGATCGAGACCAT...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGCCATTACTGGGCTGTaGAAACAGCATGAATGGGGA +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEAITGL*KQHEWG
Trigger: TCCCCATTCATGCTGTTTTCACAGCCCAGTAATGGC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTCCAACGCAGAGTTGTTaGCAGCCAGCGTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIPTQSC*QPASAS
Trigger: GCTTGCAGACGCTGGCTGCCAACAACTCTGCGTTGG...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGTCCACCAAAATGAAGTaGAAGCACGTCTTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGSTKMK*KHVLSC
Trigger: GCAACTCAAGACGTGCTTCCACTTCATTTTGGTGGA...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGGCCGTGCCCGCCTTGTaGTGCAGGCTTCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEAVPAL*CRLQQF
Trigger: AAACTGCTGAAGCCTGCACCACAAGGCGGGCACGGC...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
3UTR CAA 72 bp GGGAATGGAGACTGTGGGCAAAGCAGTACAGTCCACTaGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GNGDCGQSSTVH*FAGGKVKLCLY
Trigger: ATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTTGCCCACAGTCTCCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTATGATGACCACATTATaGGAATACATTTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASMMTTL*EYIWFC
Trigger: GCAGAACCAAATGTATTCTCATAATGTGGTCATCAT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAATTCTGCTCGTTGGCTTaGGAGATAGTGGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEFCSLA*EIVVMF
Trigger: GAACATCACCACTATCTCTCAAGCCAACGAGCAGAA...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAAGTAGCATTTGTCTGTaGAGTTCTTCCAGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQESSICL*SSSSEA
Trigger: CGCCTCACTGGAAGAACTTCACAGACAAATGCTACT...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGCATGTGTGCAGGCTTaGTTGACACTGGCAAAATCT +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEACVQA*LTLAKS
Trigger: AGATTTTGCCAGTGTCAATCAAGCCTGCACACATGC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCAAGAATGTTGGCTGGTaGTGGGCTCAAGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GDAIRKECPLPLRAENLLKNVGW*WAQGRH
Trigger: GTGCCTGCCTTGAGCCCATCACCAGCCAACATTCTT...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGTTGGGAGGATCAGGTaGGACAATCTGATTGAAGGA +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEVGRIR*DNLIEG
Trigger: TCCTTCAATCAGATTGTCTCACCTGATCCTCCCAAC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTCTCATCAAATCTTGTTaGATCCTGAGAGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASLIKSC*ILRETE
Trigger: TTCTGTTTCTCTCAGGATGCAACAAGATTTGATGAG...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGGCCATTGTCCTCCGGTaGTGGGGTTGGCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEAIVLR*WGWLIL
Trigger: CAGAATGAGCCAACCCCAGCACCGGAGGACAATGGC...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTGTGATTCAGTCCATGTaGACAATGAAAATCAGCATA +
Preference number: 4 (lower is better)
Translates to: GISSSTAWEDPWEGEGICVIQSM*TMKISI
Trigger: TATGCTGATTTTCATTGTGCACATGGACTGAATCAC...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTCCAGGGTGTCGTTGTTaGCTTTGGCCAACGCAGAGT +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIPGCRC*LWPTQS
Trigger: ACTCTGCGTTGGCCAAAGCCAACAACGACACCCTGG...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAACTAGAATGTCTGATCTaGAGGTGGAGAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQELECLI*RWRVLS
Trigger: ACTCAGAACTCTCCACCTTCAGATCAGACATTCTAG...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCCACCTCCTCCTCCTCTaGGAAGTCGTCTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: GDAIRKECPLPLRAENLLHLLLL*EVVFHG
Trigger: ACCATGAAAGACGACTTCGCAGAGGAGGAGGAGGTG...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGATGAGGTTCCTCTGCTaGACCTGGGTCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWMRFLC*TWVRFR
Trigger: CCTGAACCTGACCCAGGTGCAGCAGAGGAACCTCAT...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGGCAATCTCTGCCTCCTaGGCTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEAISAS*AQAILL
Trigger: CAGGAGAATCGCTTGAGCCCAGGAGGCAGAGATTGC...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTTTCATTTTCACGCTCTaGGTCTGTGAGGCCGATCCA +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIFIFTL*VCEADP
Trigger: TGGATCGGCCTCACAGACTCAGAGCGTGAAAATGAA...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGAAAATTTGCTCATGTaGTCCCATCACAGTCCGTTA +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEENLLM*SHHSPL
Trigger: TAACGGACTGTGATGGGATCACATGAGCAAATTTTC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAAGTCCATGTGCACAATaGAAATCAGCATATCACCCT +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQESPCAQ*KSAYHP
Trigger: AGGGTGATATGCTGATTTTCATTGTGCACATGGACT...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTGACGCCATACGTTCCTaGCAGTTAATGTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIDAIRS*QLMLAL
Trigger: CAGAGCCAACATTAACTGTCAGGAACGTATGGCGTC...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAATCAGTTGTGTGTAGGTaGATAGAAAGCTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQESVVCR*IESWCV
Trigger: TACACACCAGCTTTCTATTCACCTACACACAACTGA...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTATAGGCCAGATTCAGTaGCCTTCCCAACAGATGCCT +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIIGQIQ*PSQQMP
Trigger: AGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTAT...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGTTCCTCTGCTGCACCTaGGTCAGGTTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEFLCCT*VRFRLL
Trigger: CAACAACCTGAACCTGACCCAGGTGCAGCAGAGGAA...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTTGTCGTTGTTGGCTTTaGCCAACGCAGAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFICRCWL*PTQSCW
Trigger: CCAACAACTCTGCGTTGGCCAAAGCCAACAACGACA...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGTCCGTCTCAAAGAGCTaGAAGCGTTCCTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWSVSKS*KRSSSW
Trigger: CCAACTGGAGGAACGCTTCCAGCTCTTTGAGACGGA...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCCTTCATTTAGATTGCTaGTCAGCGTCCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GDAIRKECPLPLRAENLLLHLDC*SASAGG
Trigger: ACCACCTGCGGACGCTGACCAGCAATCTAAATGAAG...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCACACGTCAAGAATGTTaGCTGGTGATGGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GDAIRKECPLPLRAENLLTRQEC*LVMGSR
Trigger: CCTTGAGCCCATCACCAGCCAACATTCTTGACGTGT...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAAATCTTGTTGCATCCTaGGAGAAACAGAATCCAAAC +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQENLVAS*EKQNPN
Trigger: GTTTGGATTCTGTTTCTCTCAGGATGCAACAAGATT...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAATTTGCCTTTGAGAGCTaGAAATTTGCTCATGTGATC +
Preference number: 4 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEFAFES*KFAHVI
Trigger: GATCACATGAGCAAATTTTCAGCTCTCAAAGGCAAA...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTAGTGGAAGCACGTCTTaGGTTGCCCATTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFISGSTS*VAHFFC
Trigger: ACAGAAGAAATGGGCAACTCAAGACGTGCTTCCACT...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGTTTGGTTCTGCAGATTaGCCTGGAGCACGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEFGSAD*PGARWY
Trigger: ATACCAGCGTGCTCCAGGGCAATCTGCAGAACCAAA...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGTCATCCACAGACCGCTaGAGATTCGTGATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWSSTDR*RFVMRF
Trigger: GAACCTCATCACGAATCTGCAGCGGTCTGTGGATGA...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGATCATGCGTATGCCTTaGAGTTATGTTTTTGGAATA +
Preference number: 4 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGIMRMP*SYVFGI
Trigger: TATTCCAAAAACATAACTCCAAGGCATACGCATGAT...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGGAAGGTGGAGAGTTCTaGGTTGGTGCTGATAGCTTT +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEEGGEF*VGADSF
Trigger: AAAGCTATCAGCACCAACTCAGAACTCTCCACCTTC...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGCTTGCTGCAGATTCGTaGCATAGCCATTATACGCCT +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEELAADS*HSHYTP
Trigger: AGGCGTATAATGGCTATGTCACGAATCTGCAGCAAG...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCACCTGCTGCAGATTTTaGAAGTCGTTCTTGATTCGC +
Preference number: 4 (lower is better)
Translates to: GDAIRKECPLPLRAENLLTCCRF*KSFLIR
Trigger: GCGAATCAAGAACGACTTTCAAAATCTGCAGCAGGT...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGGTGTCCTTCTTGGCTTaGAGAAAAACCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWVSFLA*RKTCCR
Trigger: TCTGCAGCAGGTTTTTCTTCAAGCCAAGAAGGACAC...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGCTGTGCAAGTGGTCCTaGCTTCATTTAGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWLCKWS*LHLDCW
Trigger: CCAGCAATCTAAATGAAGTCAGGACCACTTGCACAG...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGGTGAATGAGTTGAGCTaGCTGTTCATATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEVNELS*LFISSR
Trigger: CCTGGAGGATATGAACAGCCAGCTCAACTCATTCAC...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTAAGCGTTCCTCCAGTTaGTTGAACTTGATGGCTGTT +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIKRSSS*LNLMAV
Trigger: AACAGCCATCAAGTTCAACCAACTGGAGGAACGCTT...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGATCTCACGAAGTTGCTaGCGGAGATCTAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEISRSC*RRSRMS
Trigger: AGACATTCTAGATCTCCGTCAGCAACTTCGTGAGAT...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR TCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTTCTAGACATTCCAAGTaGTTGGTTCCTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFISRHSK*LVPLRK
Trigger: TTTCCTCAGAGGAACCAATCACTTGGAATGTCTAGA...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGCAGGTCACTTTCCACTaGTGTGAGCTTGTCATCATA +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWQVTFH*CELVII
Trigger: TATGATGACAAGCTCACAGCAGTGGAAAGTGACCTG...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGAAGCACGTCTTGAGTTaGCCATTTCTTCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWKHVLS*PFLLCL
Trigger: CAGACACAGAAGAAATGGGCAACTCAAGACGTGCTT...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGTTGACGTCTTCACATTaGAAATCGTTCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEELTSSH*KSFHCP
Trigger: TGGGCAGTGGAACGATTTCCAATGTGAAGACGTCAA...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGCATTTCTTCTGTGTCTaGTCAGGCACACGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEEHFFCV*SGTRQE
Trigger: TTCTTGACGTGTGCCTGACCAGACACAGAAGAAATG...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCAAGGACTTGGACCAGTaGCTGATAAATAATAAGCAC +
Preference number: 4 (lower is better)
Translates to: GDAIRKECPLPLRAENLLKDLDQ*LINNKH
Trigger: GTGCTTATTATTTATCAGGCACTGGTCCAAGTCCTT...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGAATCCGTGTCCTTCTTaGCTTGAAGAAAAACCTGCT +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEENPCPS*LEEKPA
Trigger: AGCAGGTTTTTCTTCAAGCCAAGAAGGACACGGATT...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGAATCCAAACGGATGTTaGCCAGGGTATTATTCAAGG +
Preference number: 4 (lower is better)
Translates to: FHTLEDIICIIARLLTEENPNGC*PGYYSR
Trigger: CCTTGAATAATACCCTGGCCAACATCCGTTTGGATT...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTGACACTGGCAAAATCTaGAAGGATATTTCTAGACAT +
Preference number: 4 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIDTGKI*KDISRH
Trigger: ATGTCTAGAAATATCCTTGCAGATTTTGCCAGTGTC...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGGGAGAAGGAATCTGTTaGATGGAAATCTTACCTTTG +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWGEGIC*MEILPL
Trigger: CAAAGGTAAGATTTCCATCCAACAGATTCCTTCTCC...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR GCA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGTCTTGCATTTTATCATaGGTATGCCTTGGAGTTATG +
Preference number: 4 (lower is better)
Translates to: RIYVIQSMCTMKISISPWSCILS*VCLGVM
Trigger: CATAACTCCAAGGCATACGCATGATAAAATGCAAGA...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS GCA 90 bp GCTCCGCGCGAGCGCCGCGCAGCCGAGGAAGTCGTCCCGAGCGGCTaGTCACCGCACGCCCATGGTAGCCGCGCCGCGCGCCGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: APRERRAAEEVVPSG*SPHAHGSRAARRPS
Trigger: AGACGGCCGGCGCGCGGCGCGGCTACCATGGGCGTGCGGTGAGCAGCCGCTCGGGACGACTTCCTCGGCTGCGCGGCGCTCGCGCGGAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS GCA 90 bp GGCTTGGACTTACCATTGTCCTCCGGTGCTGGGGTTGGCTCATTCTaGAGGGCCAGGGGCACCACCGCTCCTGATGGGCCAGGAGGGCCG +
Preference number: 5 (lower is better)
Translates to: GLDLPLSSGAGVGSF*RARGTTAPDGPGGP
Trigger: CGGCCCTCCTGGCCCATCAGGAGCGGTGGTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGTAAGTCCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CCA 90 bp GGGTTGGCTCAGTCTCAAGCACATGCACTGCCCTGTCCCCCTGGCTaGAGGGAGGGCTTGGACTTACCATTGTCCTCCGGTGCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: GLAQSQAHALPCPPG*REGLDLPLSSGAGV
Trigger: AACCCCAGCACCGGAGGACAATGGTAAGTCCAAGCCCTCCCTCCAGCCAGGGGGACAGGGCAGTGCATGTGCTTGAGACTGAGCCAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CCA 90 bp TGCCTTTCTTCAGCTGTGTTTCAGAGGCCAAAACTGTGGTCCCGCTaGGAGCAGCCTGAGCGTCCCTGCACGAGGCCCACAGCTGACGTT +
Preference number: 5 (lower is better)
Translates to: CLSSAVFQRPKLWSR*EQPERPCTRPTADV
Trigger: AACGTCAGCTGTGGGCCTCGTGCAGGGACGCTCAGGCTGCTCCCAGCGGGACCACAGTTTTGGCCTCTGAAACACAGCTGAAGAAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS-3UTR CAA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCGTGTCGTTGTTGGCTTaGGCCAACGCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVVSLLA*ANAELL
Trigger: CAACAACTCTGCGTTGGCCAAAGCCAACAACGACAC...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTGACCAGCTGGTCCAATaGGGCCTCTCTCACCCGCAG +
Preference number: 5 (lower is better)
Translates to: GISSSTAWEDPWEGEGICDQLVQ*GLSHPQ
Trigger: CTGCGGGTGAGAGAGGCCCAATTGGACCAGCTGGTC...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS TCA 90 bp CACATGTTGATGGAGCTAACCGAGGGAGCCCATCTATCTCCAGAGTaGGGATGTAAAACGAGGGAAGAGCGCTCAGGGCGGCCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: HMLMELTEGAHLSPE*GCKTREERSGRPAG
Trigger: GCCTGCTGGCCGCCCTGAGCGCTCTTCCCTCGTTTTACATCCTCACTCTGGAGATAGATGGGCTCCCTCGGTTAGCTCCATCAACATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS-3UTR CAA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTTTGGCCAACGCAGAGTaGTTGGCAGCCAGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: GISSSTAWEDPWEGEGICLANAE*LAASVC
Trigger: GCAGACGCTGGCTGCCAACAACTCTGCGTTGGCCAA...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCCGTTCCTCCAGTTGGTaGAACTTGATGGCTGTTCTA +
Preference number: 5 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVRSSSW*NLMAVL
Trigger: TAGAACAGCCATCAAGTTCAACCAACTGGAGGAACG...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGGAGCCTTTAGATCCTTaGCCGCCACGCTCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGEPLDP*PPRSPG
Trigger: CCCCGGAGAGCGTGGCGGCAAAGGATCTAAAGGCTC...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp GTGCCCGCCTTGTGGTGCAGGCTTCAGCAGTTTAGGCCCAGAGGACTGTGGGTCATTGACGTCTTCACATaGGAAATCGTTCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: VPALWCRLQQFRPRGLWVIDVFT*EIVPLP
Trigger: GGGCAGTGGAACGATTTCCAATGTGAAGACGTCAAT...GACCCACAGTCCTCTGGGCCTAAACTGCTGAAGCCTGCACCACAAGGCGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS CCA 90 bp ATCGTTCCACTGCCCAGCATAAATCAACCCAGCACAGTCTTCTCCTaGCCCATGGCCATGACCCCAGTTATCCGGCTGTCCAGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: IVPLPSINQPSTVFS*PMAMTPVIRLSSFP
Trigger: TGGAAAGCTGGACAGCCGGATAACTGGGGTCATGGCCATGGGCCAGGAGAAGACTGTGCTGGGTTGATTTATGCTGGGCAGTGGAACGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS-3UTR CAA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAACCTCCGGTGCTGGGGTaGGCTCATTCTGCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEPPVLG*AHSAGP
Trigger: TGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGG...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS TCA 90 bp GTCTGGAGATGTCCCATCCAGCCACTTCCATTCATTTTCACGCTCTaGGTCTGTGAGGCCGATCCAGTGGCTCTCTCTCCCTACCATCTG +
Preference number: 5 (lower is better)
Translates to: VWRCPIQPLPFIFTL*VCEADPVALSPYHL
Trigger: CAGATGGTAGGGAGAGAGAGCCACTGGATCGGCCTCACAGACTCAGAGCGTGAAAATGAATGGAAGTGGCTGGATGGGACATCTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS GCA 90 bp TTCTTGATTCGCTGGATAGCCTGGCTTGTGTCATCCACAGACCGCTaGAGATTCGTGATGAGGTTCCTCTGCTGCACCTGGGTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: FLIRWIAWLVSSTDR*RFVMRFLCCTWVRF
Trigger: GAACCTGACCCAGGTGCAGCAGAGGAACCTCATCACGAATCTGCAGCGGTCTGTGGATGACACAAGCCAGGCTATCCAGCGAATCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS GCA 90 bp TCGTTGTTGGCTTTGGCCAACGCAGAGTTGTTGGCAGCCAGCGTCTaGAAGCTCTGCACTTTCTCCTTCAGCCAATCCGTGTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SLLALANAELLAASV*KLCTFSFSQSVSFL
Trigger: CAAGAAGGACACGGATTGGCTGAAGGAGAAAGTGCAGAGCTTGCAGACGCTGGCTGCCAACAACTCTGCGTTGGCCAAAGCCAACAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS-3UTR CAA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGTCCTCCAGGGTGTCGTaGTTGGCTTTGGCCAACGCA +
Preference number: 5 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGSSRVS*LALANA
Trigger: TGCGTTGGCCAAAGCCAACAACGACACCCTGGAGGA...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTCACACGTCAAGAATGTaGGCTGGTGATGGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASHTSRM*AGDGLK
Trigger: CTTGAGCCCATCACCAGCCAACATTCTTGACGTGTG...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTCTAGCATCTCTGCCTTaGGCTGATGTGACGCCATAC +
Preference number: 5 (lower is better)
Translates to: GISSSTAWEDPWEGEGICLASLP*ADVTPY
Trigger: GTATGGCGTCACATCAGCCAAAGGCAGAGATGCTAG...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAAATGCCGTGCCCGCCTaGTGGTGCAGGCTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQENAVPA*WCRLQQ
Trigger: CTGCTGAAGCCTGCACCACAAGGCGGGCACGGCATT...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS GCA 90 bp GTGTCATCCACAGACCGCTGCAGATTCGTGATGAGGTTCCTCTGCTaGACCTGGGTCAGGTTCAGGTTGTTGAGGTTCATGATGACCACA +
Preference number: 5 (lower is better)
Translates to: VSSTDRCRFVMRFLC*TWVRFRLLRFMMTT
Trigger: TGTGGTCATCATGAACCTCAACAACCTGAACCTGACCCAGGTGCAGCAGAGGAACCTCATCACGAATCTGCAGCGGTCTGTGGATGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS GCA 90 bp CTTGTGTCATCCACAGACCGCTGCAGATTCGTGATGAGGTTCCTCTaGTGCACCTGGGTCAGGTTCAGGTTGTTGAGGTTCATGATGACC +
Preference number: 5 (lower is better)
Translates to: LVSSTDRCRFVMRFL*CTWVRFRLLRFMMT
Trigger: GGTCATCATGAACCTCAACAACCTGAACCTGACCCAGGTGCAGCAGAGGAACCTCATCACGAATCTGCAGCGGTCTGTGGATGACACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS-3UTR CAA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTGAAGCGTTCCTCCAGTaGGTTGAACTTGATGGCTGT +
Preference number: 5 (lower is better)
Translates to: GISSSTAWEDPWEGEGICEAFLQ*VELDGC
Trigger: ACAGCCATCAAGTTCAACCAACTGGAGGAACGCTTC...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGAGCCTGAAGAGGTGTaGGAATGCCGTGCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEEPEEV*ECRARL
Trigger: AAGGCGGGCACGGCATTCCAACACCTCTTCAGGCTC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS CCA 90 bp TACGGAACCCAGGAACACTTGGATGTGAGAACCCAGCACCAAAACTaGGCTCACGGATCAACAAAAATAACCCGGGCCTCACCGACCAAA +
Preference number: 5 (lower is better)
Translates to: YGTQEHLDVRTQHQN*AHGSTKITRASPTK
Trigger: TTTGGTCGGTGAGGCCCGGGTTATTTTTGTTGATCCGTGAGCCCAGTTTTGGTGCTGGGTTCTCACATCCAAGTGTTCCTGGGTTCCGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS-3UTR CAA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTGTCAGGTTCAGGTTGTaGAGGTTCATGATGACCACA +
Preference number: 5 (lower is better)
Translates to: GISSSTAWEDPWEGEGICVRFRL*RFMMTT
Trigger: TGTGGTCATCATGAACCTCAACAACCTGAACCTGAC...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGAGCAGTACAGTCCACTaGTTCGCAGGTGGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGSSTVH*FAGGKV
Trigger: GACTTTCCCACCTGCGAACAAGTGGACTGTACTGCT...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS CCA 90 bp ACAGCTGACGTTCACGGACGTGCTCGCAGCAAGCATGACCCAAAGTaGACTGCAGAGCACAAGCCAAAACCACATAATCTGGAAAAGATC +
Preference number: 5 (lower is better)
Translates to: TADVHGRARSKHDPK*TAEHKPKPHNLEKI
Trigger: GATCTTTTCCAGATTATGTGGTTTTGGCTTGTGCTCTGCAGTCCACTTTGGGTCATGCTTGCTGCGAGCACGTCCGTGAACGTCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS-3UTR CAA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGTACGCCTGGAGGGTTTaGTTTACAGTGGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGYAWRV*FTVVMR
Trigger: CCTCATCACCACTGTAAACAAAACCCTCCAGGCGTA...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTGAATCCAAACGGATGTaGGCCAGGGTATTATTCAAG +
Preference number: 5 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASESKRM*ARVLFK
Trigger: CTTGAATAATACCCTGGCCAACATCCGTTTGGATTC...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTCGACCTCATCAAATCTaGTTGCATCCTGAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASRPHQI*LHPERN
Trigger: GTTTCTCTCAGGATGCAACAAGATTTGATGAGGTCG...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp TTCCATACTTTGGAAGACATAATTTGTATAATCGCACGGTTACTGACGGAGGAGATCCTCTGTCACCTCTaGGACCCCTGGGGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: FHTLEDIICIIARLLTEEILCHL*DPWGPV
Trigger: CACCGGGCCCCAGGGGTCCAAGAGGTGACAGAGGAT...CTCCTCCGTCAGTAACCGTGCGATTATACAAATTATGTCTTCCAAAGTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS TCA 90 bp GTTGGCTTGAGAGATAGTGGTGATGTTCTCCATCTGACCTGTGAATaGGTTGAGCTGGCTGTTCATATCCTCCAGGGTGTCGTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: VGLRDSGDVLHLTCE*VELAVHILQGVVVG
Trigger: GCCAACAACGACACCCTGGAGGATATGAACAGCCAGCTCAACTCATTCACAGGTCAGATGGAGAACATCACCACTATCTCTCAAGCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS-3UTR CAA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGCTTGTCATCATAGGTTaGGCGAGATGTTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGLVIIG*ARCFHA
Trigger: GGCATGGAAACATCTCGCCAAACCTATGATGACAAG...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGGTGGAGAGTTCTGAGTaGGTGCTGATAGCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGVESSE*VLIAFF
Trigger: GAAGAAAGCTATCAGCACCAACTCAGAACTCTCCAC...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp GGGATAAGTAGCAGCACTGCCTGGGAAGACCCTTGGGAGGGAGAAGGAATCTGTTCCAGTTGGTTGAACTaGATGGCTGTTCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: GISSSTAWEDPWEGEGICSSWLN*MAVLFS
Trigger: AGAGAATAGAACAGCCATCAAGTTCAACCAACTGGA...ACAGATTCCTTCTCCCTCCCAAGGGTCTTCCCAGGCAGTGCTGCTACTTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGGAACCACGGGAGCCTTaGGGGCCCTGGGAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: RIYVIQSMCTMKISISPWEPREP*GPWEPL
Trigger: TAAAGGCTCCCAGGGCCCCAAAGGCTCCCGTGGTTC...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAAGAGCACGCTGGTATCTaGCTGCAGATTCGTGACATA +
Preference number: 5 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEEHAGI*LQIRDI
Trigger: TATGTCACGAATCTGCAGCAAGATACCAGCGTGCTC...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTATTATGAGAATACATTaGGTTCTGCAGATTGCCCTG +
Preference number: 5 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASIMRIH*VLQIAL
Trigger: CAGGGCAATCTGCAGAACCAAATGTATTCTCATAAT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCTCCAGGGTGTCGTTGTaGGCTTTGGCCAACGCAGAG +
Preference number: 5 (lower is better)
Translates to: GDAIRKECPLPLRAENLLSRVSL*ALANAE
Trigger: CTCTGCGTTGGCCAAAGCCAACAACGACACCCTGGA...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS TCA 90 bp ACAGTGGTGATGAGGAAAGAGTTATTCTCCAAAGTTTCTTTCAATTaGCTCTGCCTGTCCACCAGAGCATCCCCGCTCGCCTGTAACTTC +
Preference number: 5 (lower is better)
Translates to: TVVMRKELFSKVSFN*LCLSTRASPLACNF
Trigger: GAAGTTACAGGCGAGCGGGGATGCTCTGGTGGACAGGCAGAGTCAATTGAAAGAAACTTTGGAGAATAACTCTTTCCTCATCACCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 90 bp ACCTGGGTCAGGTTCAGGTTGTTGAGGTTCATGATGACCACATTATaGGAATACATTTGGTTCTGCAGATTGCCCTGGAGCACGCTGGTA +
Preference number: 5 (lower is better)
Translates to: TWVRFRLLRFMMTTL*EYIWFCRLPWSTLV
Trigger: TACCAGCGTGCTCCAGGGCAATCTGCAGAACCAAATGTATTCTCATAATGTGGTCATCATGAACCTCAACAACCTGAACCTGACCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS-3UTR CAA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTTTTACATTTGGTACATaGTGTTCCTTCCTGAATACC +
Preference number: 5 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASFTFGT*CSFLNT
Trigger: GGTATTCAGGAAGGAACACAATGTACCAAATGTAAA...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp ACACAGGTGCTGAGCAGTTGGCCATTACTGGGCTGTGAAAACAGCATGAATGGGAGATCATCTGTGTGTTaGGTAAGGGTATCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: TQVLSSWPLLGCENSMNGRSSVC*VRVSVQ
Trigger: TTGCACAGATACCCTTACCAAACACACAGATGATCT...CCCATTCATGCTGTTTTCACAGCCCAGTAATGGCCAACTGCTCAGCACCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp ACACAGGGCCTTCCAGATAGGCCAGATTCAGTGCCCTTCCCAACAGATGCCTCTACAAGATGTGAAGACTaGTCTTCACAGAAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: TQGLPDRPDSVPFPTDASTRCED*SSQKSF
Trigger: AAAGCTTTTCTGTGAAGACAAGTCTTCACATCTTGT...AGAGGCATCTGTTGGGAAGGGCACTGAATCTGGCCTATCTGGAAGGCCCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGCTTGTAACCGAAGGATaGCACCTCCTCCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RIYVIQSMCTMKISISPWLVTEG*HLLLLC
Trigger: GCAGAGGAGGAGGAGGTGCAATCCTTCGGTTACAAG...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCCTGACTTCATTTAGATaGCTGGTCAGCGTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GDAIRKECPLPLRAENLLLTSFR*LVSVRR
Trigger: CCTGCGGACGCTGACCAGCAATCTAAATGAAGTCAG...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGTGCTTCCTAGGGCTGTaGGGAGGATCAGGTGAGACA +
Preference number: 5 (lower is better)
Translates to: RIYVIQSMCTMKISISPWCFLGL*GGSGET
Trigger: TGTCTCACCTGATCCTCCCAACAGCCCTAGGAAGCA...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS GCA 90 bp AAGTTGGCTACTTCAGTGTCTAACCTCGACCTCATCAAATCTTGTTaGATCCTGAGAGAAACAGAATCCAAACGGATGTTGGCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: KLATSVSNLDLIKSC*ILRETESKRMLARV
Trigger: TACCCTGGCCAACATCCGTTTGGATTCTGTTTCTCTCAGGATGCAACAAGATTTGATGAGGTCGAGGTTAGACACTGAAGTAGCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS-3UTR CAA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCTGGGTCAGGTTCAGGTaGTTGAGGTTCATGATGACC +
Preference number: 5 (lower is better)
Translates to: GDAIRKECPLPLRAENLLWVRFR*LRFMMT
Trigger: GGTCATCATGAACCTCAACAACCTGAACCTGACCCA...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTCGTGTCCTTCTTGGCTaGAAGAAAAACCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIRVLLG*KKNLLQ
Trigger: CTGCAGCAGGTTTTTCTTCAAGCCAAGAAGGACACG...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS TCA 90 bp CTGGGGCCCGGTGGACCTTGTAGTATTGTAAAATTCTTGATGAGCTaGCCATGCTTGGAGTCTACTAGCTTCATTTCTTCCATAATCACT +
Preference number: 5 (lower is better)
Translates to: LGPGGPCSIVKFLMS*PCLESTSFISSIIT
Trigger: AGTGATTATGGAAGAAATGAAGCTAGTAGACTCCAAGCATGGTCAGCTCATCAAGAATTTTACAATACTACAAGGTCCACCGGGCCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS-3UTR CAA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTGTTCTGCTCGTTGGCTaGAGAGATAGTGGTGATGTT +
Preference number: 5 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIVLLVG*RDSGDV
Trigger: AACATCACCACTATCTCTCAAGCCAACGAGCAGAAC...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTTGCATGTGTGCAGGCTaGATTGACACTGGCAAAATC +
Preference number: 5 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFICMCAG*IDTGKI
Trigger: GATTTTGCCAGTGTCAATCAAGCCTGCACACATGCA...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS TCA 90 bp CTACTTCAGTGTCTAACCTCGACCTCATCAAATCTTGTTGCATCCTaGGAGAAACAGAATCCAAACGGATGTTGGCCAGGGTATTATTCA +
Preference number: 5 (lower is better)
Translates to: LLQCLTSTSSNLVAS*EKQNPNGCWPGYYS
Trigger: TGAATAATACCCTGGCCAACATCCGTTTGGATTCTGTTTCTCTCAGGATGCAACAAGATTTGATGAGGTCGAGGTTAGACACTGAAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CCA 90 bp ATGTTCACAATATCCGTCTCAAAGAGCTGGAAGCGTTCCTCCAGTTaGTTGAACTTGATGGCTGTTCTATTCTCTGCATCTTTGTGTAAG +
Preference number: 5 (lower is better)
Translates to: MFTISVSKSWKRSSS*LNLMAVLFSASLCK
Trigger: CTTACACAAAGATGCAGAGAATAGAACAGCCATCAAGTTCAACCAACTGGAGGAACGCTTCCAGCTCTTTGAGACGGATATTGTGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS-3UTR CAA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTCTATTCTCTGCATCTTaGTGTAAGTCCTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFILFSAS*CKSCRS
Trigger: AGACCTGCAGGACTTACACAAAGATGCAGAGAATAG...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAATCGCAAATGAAGTTATaGACGTCTTCACATTGGAAA +
Preference number: 5 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQESQMKL*TSSHWK
Trigger: TTTCCAATGTGAAGACGTCAATAACTTCATTTGCGA...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp CAAAGCTTGCGTCTGAATCCTGTCTCACTACTCAGTAATGGAGTGACCCAGGAACCATTATTGTTTTCTTaGGCTCCATGTATTATGTCG +
Preference number: 5 (lower is better)
Translates to: QSLRLNPVSLLSNGVTQEPLLFS*APCIMS
Trigger: CGACATAATACATGGAGCCAAAGAAAACAATAATGG...TTCCTGGGTCACTCCATTACTGAGTAGTGAGACAGGATTCAGACGCAAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGAAGTGGAAGCACGTCTaGAGTTGCCCATTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: RIYVIQSMCTMKISISPWKWKHV*SCPFLL
Trigger: CAGAAGAAATGGGCAACTCAAGACGTGCTTCCACTT...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp AAAGCAGTACAGTCCACTTGTTCGCAGGTGGGAAAGTCAAACTCTGTCTTTATTCCTCATCAAATCTTGTaGCATCCTGAGAGAAACAGA +
Preference number: 5 (lower is better)
Translates to: KAVQSTCSQVGKSNSVFIPHQIL*HPERNR
Trigger: TCTGTTTCTCTCAGGATGCAACAAGATTTGATGAGG...AATAAAGACAGAGTTTGACTTTCCCACCTGCGAACAAGTGGACTGTACTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp AGAATCTATGTGATTCAGTCCATGTGCACAATGAAAATCAGCATATCACCCTGGAACCTGCTGCAGATTTaGAAAGTCGTTCTTGATTCG +
Preference number: 5 (lower is better)
Translates to: RIYVIQSMCTMKISISPWNLLQI*KVVLDS
Trigger: CGAATCAAGAACGACTTTCAAAATCTGCAGCAGGTT...CCAGGGTGATATGCTGATTTTCATTGTGCACATGGACTGAATCACATAGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCATAATCACTGATAAGTaGGCTACTTCAGTGTCTAAC +
Preference number: 5 (lower is better)
Translates to: GDAIRKECPLPLRAENLLIITDK*ATSVSN
Trigger: GTTAGACACTGAAGTAGCCAACTTATCAGTGATTAT...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS-3UTR CAA 90 bp GGTGATGCAATTAGAAAGGAGTGTCCTTTGCCTTTGAGAGCTGAAAATTTGCTCTATCATGCGTATGCCTaGGAGTTATGTTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: GDAIRKECPLPLRAENLLYHAYA*ELCFWN
Trigger: ATTCCAAAAACATAACTCCAAGGCATACGCATGATA...GAGCAAATTTTCAGCTCTCAAAGGCAAAGGACACTCCTTTCTAATTGCATCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS GCA 72 bp GAGCGCCGCGCAGCCGAGGAAGTCGTCCCGAGCGGCTaGTCACCGCACGCCCATGGTAGCCGCGCCGCGCGC +
Preference number: 6 (lower is better)
Translates to: ERRAAEEVVPSG*SPHAHGSRAAR
Trigger: GCGCGCGGCGCGGCTACCATGGGCGTGCGGTGAGCAGCCGCTCGGGACGACTTCCTCGGCTGCGCGGCGCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CCA 72 bp GTGAGGCGGGCAGCCATTGTCCTCCGGTGCTGGGGTTaGCTCATTCTGCAGGGCCAGGGGCACCACCGCTCC +
Preference number: 6 (lower is better)
Translates to: VRRAAIVLRCWG*LILQGQGHHRS
Trigger: GGAGCGGTGGTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGCTGCCCGCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS GCA 72 bp CAGCCATTGTCCTCCGGTGCTGGGGTTGGCTCATTCTaGAGGGCCAGGGGCACCACCGCTCCTGATGGGCCA +
Preference number: 6 (lower is better)
Translates to: QPLSSGAGVGSF*RARGTTAPDGP
Trigger: TGGCCCATCAGGAGCGGTGGTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS CCA 72 bp GGCTTCCCAGGGGAACCACGGGAGCCTTTGGGGCCCTaGGAGCCTTTAGATCCTTTGCCGCCACGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: GFPGEPREPLGP*EPLDPLPPRSP
Trigger: CGGAGAGCGTGGCGGCAAAGGATCTAAAGGCTCCCAGGGCCCCAAAGGCTCCCGTGGTTCCCCTGGGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CCA 72 bp CTTCCAGTGAGGCGGGCAGCCATTGTCCTCCGGTGCTaGGGTTGGCTCATTCTGCAGGGCCAGGGGCACCAC +
Preference number: 6 (lower is better)
Translates to: LPVRRAAIVLRC*GWLILQGQGHH
Trigger: GTGGTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGCTGCCCGCCTCACTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS CAA 90 bp GCTGGAGGGAGGGCTTGGACTTACCATTGTCCTCCGGTGCTGGGGTaGGCTCATTCTGCAGGGCCAGGGGCACCACCGCTCCTGATGGGC +
Preference number: 6 (lower is better)
Translates to: AGGRAWTYHCPPVLG*AHSAGPGAPPLLMG
Trigger: GCCCATCAGGAGCGGTGGTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGTAAGTCCAAGCCCTCCCTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS GCA 72 bp GTTCTTCCAGTGAGGCGGGCAGCCATTGTCCTCCGGTaGTGGGGTTGGCTCATTCTGCAGGGCCAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: VLPVRRAAIVLR*WGWLILQGQGH
Trigger: GTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGCTGCCCGCCTCACTGGAAGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400256.5
CDS CCA 72 bp GGGCTTGGACTTACCATTGTCCTCCGGTGCTGGGGTTaGCTCATTCTGCAGGGCCAGGGGCACCACCGCTCC +
Preference number: 6 (lower is better)
Translates to: GLGLTIVLRCWG*LILQGQGHHRS
Trigger: GGAGCGGTGGTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGTAAGTCCAAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS GCA 72 bp TTACCATTGTCCTCCGGTGCTGGGGTTGGCTCATTCTaGAGGGCCAGGGGCACCACCGCTCCTGATGGGCCA +
Preference number: 6 (lower is better)
Translates to: LPLSSGAGVGSF*RARGTTAPDGP
Trigger: TGGCCCATCAGGAGCGGTGGTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS GCA 72 bp CTGGAGGGAGGGCTTGGACTTACCATTGTCCTCCGGTaGTGGGGTTGGCTCATTCTGCAGGGCCAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: LEGGLGLTIVLR*WGWLILQGQGH
Trigger: GTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGTAAGTCCAAGCCCTCCCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CCA 72 bp GAGGGAGGGCTTGGACTTACCATTGTCCTCCGGTGCTaGGGTTGGCTCATTCTGCAGGGCCAGGGGCACCAC +
Preference number: 6 (lower is better)
Translates to: EGGLGLTIVLRC*GWLILQGQGHH
Trigger: GTGGTGCCCCTGGCCCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGTAAGTCCAAGCCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CCA 72 bp TCAGCTGTGTTTCAGAGGCCAAAACTGTGGTCCCGCTaGGAGCAGCCTGAGCGTCCCTGCACGAGGCCCACA +
Preference number: 6 (lower is better)
Translates to: SAVFQRPKLWSR*EQPERPCTRPT
Trigger: TGTGGGCCTCGTGCAGGGACGCTCAGGCTGCTCCCAGCGGGACCACAGTTTTGGCCTCTGAAACACAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CAA 72 bp TGTCCCCCTGGCTGGAGGGAGGGCTTGGACTTACCATaGTCCTCCGGTGCTGGGGTTGGCTCATTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: CPPGWREGLDLP*SSGAGVGSFCR
Trigger: CCTGCAGAATGAGCCAACCCCAGCACCGGAGGACAATGGTAAGTCCAAGCCCTCCCTCCAGCCAGGGGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS GCA 72 bp CGCTGGATAGCCTGGCTTGTGTCATCCACAGACCGCTaGAGATTCGTGATGAGGTTCCTCTGCTGCACCTGG +
Preference number: 6 (lower is better)
Translates to: RWIAWLVSSTDR*RFVMRFLCCTW
Trigger: CCAGGTGCAGCAGAGGAACCTCATCACGAATCTGCAGCGGTCTGTGGATGACACAAGCCAGGCTATCCAGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CCA 72 bp CATACCCCTGTGGTCCCAGCTACGCAGGAGTCTGAGTaGGAAGATCACCTAAGCCCAGGAGGTCAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: HTPVVPATQESE*EDHLSPGGQSC
Trigger: GCAGCTTTGACCTCCTGGGCTTAGGTGATCTTCCCACTCAGACTCCTGCGTAGCTGGGACCACAGGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CAA 90 bp GAGTTGAGCTGGCTGTTCATATCCTCCAGGGTGTCGTTGTTGGCTTaGGCCAACGCAGAGTTGTTGGCAGCCAGCGTCTGCAAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: ELSWLFISSRVSLLA*ANAELLAASVCKLC
Trigger: GCAGAGCTTGCAGACGCTGGCTGCCAACAACTCTGCGTTGGCCAAAGCCAACAACGACACCCTGGAGGATATGAACAGCCAGCTCAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp GCCTGTTCTGGCAGCAGGGCTCCTGTGCCAGCCCCTATGATGCCTTaGCTGTTAAATAATATGCAGCGGGGGACAAGACGTGGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: ACSGSRAPVPAPMMP*LLNNMQRGTRRGGS
Trigger: TGAGCCACCACGTCTTGTCCCCCGCTGCATATTATTTAACAGCAAAGGCATCATAGGGGCTGGCACAGGAGCCCTGCTGCCAGAACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS GCA 72 bp GCTTTGGCCAACGCAGAGTTGTTGGCAGCCAGCGTCTaGAAGCTCTGCACTTTCTCCTTCAGCCAATCCGTG +
Preference number: 6 (lower is better)
Translates to: ALANAELLAASV*KLCTFSFSQSV
Trigger: CACGGATTGGCTGAAGGAGAAAGTGCAGAGCTTGCAGACGCTGGCTGCCAACAACTCTGCGTTGGCCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CCA 72 bp GGCTGTTCATATCCTCCAGGGTGTCGTTGTTGGCTTTaGCCAACGCAGAGTTGTTGGCAGCCAGCGTCTGCA +
Preference number: 6 (lower is better)
Translates to: GCSYPPGCRCWL*PTQSCWQPASA
Trigger: TGCAGACGCTGGCTGCCAACAACTCTGCGTTGGCCAAAGCCAACAACGACACCCTGGAGGATATGAACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp TGGCTGTTCATATCCTCCAGGGTGTCGTTGTTGGCTTaGGCCAACGCAGAGTTGTTGGCAGCCAGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: WLFISSRVSLLA*ANAELLAASVC
Trigger: GCAGACGCTGGCTGCCAACAACTCTGCGTTGGCCAAAGCCAACAACGACACCCTGGAGGATATGAACAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp CCTGTGAATGAGTTGAGCTGGCTGTTCATATCCTCCAGGGTGTCGTaGTTGGCTTTGGCCAACGCAGAGTTGTTGGCAGCCAGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: PVNELSWLFISSRVS*LALANAELLAASVC
Trigger: GCAGACGCTGGCTGCCAACAACTCTGCGTTGGCCAAAGCCAACAACGACACCCTGGAGGATATGAACAGCCAGCTCAACTCATTCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 72 bp TGTCCCATCCAGCCACTTCCATTCATTTTCACGCTCTaGGTCTGTGAGGCCGATCCAGTGGCTCTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: CPIQPLPFIFTL*VCEADPVALSP
Trigger: GGGAGAGAGAGCCACTGGATCGGCCTCACAGACTCAGAGCGTGAAAATGAATGGAAGTGGCTGGATGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp TTGAGCTGGCTGTTCATATCCTCCAGGGTGTCGTTGTaGGCTTTGGCCAACGCAGAGTTGTTGGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: LSWLFISSRVSL*ALANAELLAAS
Trigger: GCTGGCTGCCAACAACTCTGCGTTGGCCAAAGCCAACAACGACACCCTGGAGGATATGAACAGCCAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp GAGTTGAGCTGGCTGTTCATATCCTCCAGGGTGTCGTaGTTGGCTTTGGCCAACGCAGAGTTGTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: ELSWLFISSRVS*LALANAELLAA
Trigger: GGCTGCCAACAACTCTGCGTTGGCCAAAGCCAACAACGACACCCTGGAGGATATGAACAGCCAGCTCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp GGCAGCAGGGCTCCTGTGCCAGCCCCTATGATGCCTTaGCTGTTAAATAATATGCAGCGGGGGACAAGACGT +
Preference number: 6 (lower is better)
Translates to: GSRAPVPAPMMP*LLNNMQRGTRR
Trigger: ACGTCTTGTCCCCCGCTGCATATTATTTAACAGCAAAGGCATCATAGGGGCTGGCACAGGAGCCCTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CAA 90 bp GTGAATGAGTTGAGCTGGCTGTTCATATCCTCCAGGGTGTCGTTGTaGGCTTTGGCCAACGCAGAGTTGTTGGCAGCCAGCGTCTGCAAG +
Preference number: 6 (lower is better)
Translates to: VNELSWLFISSRVSL*ALANAELLAASVCK
Trigger: CTTGCAGACGCTGGCTGCCAACAACTCTGCGTTGGCCAAAGCCAACAACGACACCCTGGAGGATATGAACAGCCAGCTCAACTCATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 72 bp CCAGCCACTTCCATTCATTTTCACGCTCTGAGTCTGTaGGGCCGATCCAGTGGCTCTCTCTCCCTACCATCT +
Preference number: 6 (lower is better)
Translates to: PATSIHFHALSL*GRSSGSLSLPS
Trigger: AGATGGTAGGGAGAGAGAGCCACTGGATCGGCCTCACAGACTCAGAGCGTGAAAATGAATGGAAGTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 72 bp ATCAACCCAGCACAGTCTTCTCCTGGCCCATGGCCATaGCCCCAGTTATCCGGCTGTCCAGCTTTCCAATTT +
Preference number: 6 (lower is better)
Translates to: INPAQSSPGPWP*PQLSGCPAFQF
Trigger: AAATTGGAAAGCTGGACAGCCGGATAACTGGGGTCATGGCCATGGGCCAGGAGAAGACTGTGCTGGGTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS GCA 72 bp ACAGACCGCTGCAGATTCGTGATGAGGTTCCTCTGCTaGACCTGGGTCAGGTTCAGGTTGTTGAGGTTCATG +
Preference number: 6 (lower is better)
Translates to: TDRCRFVMRFLC*TWVRFRLLRFM
Trigger: CATGAACCTCAACAACCTGAACCTGACCCAGGTGCAGCAGAGGAACCTCATCACGAATCTGCAGCGGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS GCA 72 bp AACGCAGAGTTGTTGGCAGCCAGCGTCTGCAAGCTCTaGACTTTCTCCTTCAGCCAATCCGTGTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: NAELLAASVCKL*TFSFSQSVSFL
Trigger: CAAGAAGGACACGGATTGGCTGAAGGAGAAAGTGCAGAGCTTGCAGACGCTGGCTGCCAACAACTCTGCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CCA 72 bp CGCTGCAGATTCGTGATGAGGTTCCTCTGCTGCACCTaGGTCAGGTTCAGGTTGTTGAGGTTCATGATGACC +
Preference number: 6 (lower is better)
Translates to: RCRFVMRFLCCT*VRFRLLRFMMT
Trigger: GGTCATCATGAACCTCAACAACCTGAACCTGACCCAGGTGCAGCAGAGGAACCTCATCACGAATCTGCAGCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CCA 72 bp GTTCACGGACGTGCTCGCAGCAAGCATGACCCAAAGTaGACTGCAGAGCACAAGCCAAAACCACATAATCTG +
Preference number: 6 (lower is better)
Translates to: VHGRARSKHDPK*TAEHKPKPHNL
Trigger: CAGATTATGTGGTTTTGGCTTGTGCTCTGCAGTCCACTTTGGGTCATGCTTGCTGCGAGCACGTCCGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CAA 72 bp AGCGTCAGTCTGGAATCATACGGAACCCAGGAACACTaGGATGTGAGAACCCAGCACCAAAACTGGGCTCAC +
Preference number: 6 (lower is better)
Translates to: SVSLESYGTQEH*DVRTQHQNWAH
Trigger: GTGAGCCCAGTTTTGGTGCTGGGTTCTCACATCCAAGTGTTCCTGGGTTCCGTATGATTCCAGACTGACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CAA 90 bp CAGATGTTCAGCGTCAGTCTGGAATCATACGGAACCCAGGAACACTaGGATGTGAGAACCCAGCACCAAAACTGGGCTCACGGATCAACA +
Preference number: 6 (lower is better)
Translates to: QMFSVSLESYGTQEH*DVRTQHQNWAHGST
Trigger: TGTTGATCCGTGAGCCCAGTTTTGGTGCTGGGTTCTCACATCCAAGTGTTCCTGGGTTCCGTATGATTCCAGACTGACGCTGAACATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CCA 72 bp CAGGAACACTTGGATGTGAGAACCCAGCACCAAAACTaGGCTCACGGATCAACAAAAATAACCCGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: QEHLDVRTQHQN*AHGSTKITRAS
Trigger: TGAGGCCCGGGTTATTTTTGTTGATCCGTGAGCCCAGTTTTGGTGCTGGGTTCTCACATCCAAGTGTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CAA 72 bp TTGGTTCTGCAGATTGCCCTGGAGCACGCTGGTATCTaGCTGCAGATTCGTGACATAGCCATTATACGCCTG +
Preference number: 6 (lower is better)
Translates to: LVLQIALEHAGI*LQIRDIAIIRL
Trigger: CAGGCGTATAATGGCTATGTCACGAATCTGCAGCAAGATACCAGCGTGCTCCAGGGCAATCTGCAGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp ACATTGTGTTCCTTCCTGAATACCAAACCGCTTGTAACCGAAGGATaGCACCTCCTCCTCCTCTGCGAAGTCGTCTTTCATGGTGACCGT +
Preference number: 6 (lower is better)
Translates to: TLCSFLNTKPLVTEG*HLLLLCEVVFHGDR
Trigger: ACGGTCACCATGAAAGACGACTTCGCAGAGGAGGAGGAGGTGCAATCCTTCGGTTACAAGCGGTTTGGTATTCAGGAAGGAACACAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 72 bp TGCCCTGGAGCACGCTGGTATCTTGCTGCAGATTCGTaGCATAGCCATTATACGCCTGGAGGGTTTTGTTTA +
Preference number: 6 (lower is better)
Translates to: CPGARWYLAADS*HSHYTPGGFCL
Trigger: TAAACAAAACCCTCCAGGCGTATAATGGCTATGTCACGAATCTGCAGCAAGATACCAGCGTGCTCCAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp TCCTTCCTGAATACCAAACCGCTTGTAACCGAAGGATaGCACCTCCTCCTCCTCTGCGAAGTCGTCTTTCAT +
Preference number: 6 (lower is better)
Translates to: SFLNTKPLVTEG*HLLLLCEVVFH
Trigger: ATGAAAGACGACTTCGCAGAGGAGGAGGAGGTGCAATCCTTCGGTTACAAGCGGTTTGGTATTCAGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 72 bp AGAGATAGTGGTGATGTTCTCCATCTGACCTGTGAATaGGTTGAGCTGGCTGTTCATATCCTCCAGGGTGTC +
Preference number: 6 (lower is better)
Translates to: RDSGDVLHLTCE*VELAVHILQGV
Trigger: GACACCCTGGAGGATATGAACAGCCAGCTCAACTCATTCACAGGTCAGATGGAGAACATCACCACTATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 72 bp GGAAGATCACCTAAGCCCAGGAGGTCAAAGCTGCAGTaGGCTATGTTTGCACTACTTCACTTCGTCATTCCA +
Preference number: 6 (lower is better)
Translates to: GRSPKPRRSKLQ*AMFALLHFVIP
Trigger: TGGAATGACGAAGTGAAGTAGTGCAAACATAGCTCACTGCAGCTTTGACCTCCTGGGCTTAGGTGATCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582147.1
CDS CAA 90 bp AGAATACATTTGGTTCTGCAGATTGCCCTGGAGCACGCTGGTATCTaGCTGCAGATTCGTGACATAGCCATTATACGCCTGGAGGGTTTT +
Preference number: 6 (lower is better)
Translates to: RIHLVLQIALEHAGI*LQIRDIAIIRLEGF
Trigger: AAAACCCTCCAGGCGTATAATGGCTATGTCACGAATCTGCAGCAAGATACCAGCGTGCTCCAGGGCAATCTGCAGAACCAAATGTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp ATATCCGTCTCAAAGAGCTGGAAGCGTTCCTCCAGTTGGTTGAACTaGATGGCTGTTCTATTCTCTGCATCTTTGTGTAAGTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: ISVSKSWKRSSSWLN*MAVLFSASLCKSCR
Trigger: CCTGCAGGACTTACACAAAGATGCAGAGAATAGAACAGCCATCAAGTTCAACCAACTGGAGGAACGCTTCCAGCTCTTTGAGACGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 72 bp TGTCTAACCTCGACCTCATCAAATCTTGTTGCATCCTaGGAGAAACAGAATCCAAACGGATGTTGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: CLTSTSSNLVAS*EKQNPNGCWPG
Trigger: CCCTGGCCAACATCCGTTTGGATTCTGTTTCTCTCAGGATGCAACAAGATTTGATGAGGTCGAGGTTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp TCCGTCTCAAAGAGCTGGAAGCGTTCCTCCAGTTGGTaGAACTTGATGGCTGTTCTATTCTCTGCATCTTTG +
Preference number: 6 (lower is better)
Translates to: SVSKSWKRSSSW*NLMAVLFSASL
Trigger: CAAAGATGCAGAGAATAGAACAGCCATCAAGTTCAACCAACTGGAGGAACGCTTCCAGCTCTTTGAGACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp CAAGCTCTGCACTTTCTCCTTCAGCCAATCCGTGTCCTTCTTGGCTaGAAGAAAAACCTGCTGCAGATTTTGAAAGTCGTTCTTGATTCG +
Preference number: 6 (lower is better)
Translates to: QALHFLLQPIRVLLG*KKNLLQILKVVLDS
Trigger: CGAATCAAGAACGACTTTCAAAATCTGCAGCAGGTTTTTCTTCAAGCCAAGAAGGACACGGATTGGCTGAAGGAGAAAGTGCAGAGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CCA 72 bp ATATCCGTCTCAAAGAGCTGGAAGCGTTCCTCCAGTTaGTTGAACTTGATGGCTGTTCTATTCTCTGCATCT +
Preference number: 6 (lower is better)
Translates to: ISVSKSWKRSSS*LNLMAVLFSAS
Trigger: AGATGCAGAGAATAGAACAGCCATCAAGTTCAACCAACTGGAGGAACGCTTCCAGCTCTTTGAGACGGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp AATATCCGTCTCAAAGAGCTGGAAGCGTTCCTCCAGTaGGTTGAACTTGATGGCTGTTCTATTCTCTGCATC +
Preference number: 6 (lower is better)
Translates to: NIRLKELEAFLQ*VELDGCSILCI
Trigger: GATGCAGAGAATAGAACAGCCATCAAGTTCAACCAACTGGAGGAACGCTTCCAGCTCTTTGAGACGGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp TTCACAATATCCGTCTCAAAGAGCTGGAAGCGTTCCTCCAGTTGGTaGAACTTGATGGCTGTTCTATTCTCTGCATCTTTGTGTAAGTCC +
Preference number: 6 (lower is better)
Translates to: FTISVSKSWKRSSSW*NLMAVLFSASLCKS
Trigger: GGACTTACACAAAGATGCAGAGAATAGAACAGCCATCAAGTTCAACCAACTGGAGGAACGCTTCCAGCTCTTTGAGACGGATATTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 72 bp AGGTTCAGGTTGTTGAGGTTCATGATGACCACATTATaGGAATACATTTGGTTCTGCAGATTGCCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: RFRLLRFMMTTL*EYIWFCRLPWS
Trigger: GCTCCAGGGCAATCTGCAGAACCAAATGTATTCTCATAATGTGGTCATCATGAACCTCAACAACCTGAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CCA 72 bp TTGCTAATGATGTTCACAATATCCGTCTCAAAGAGCTaGAAGCGTTCCTCCAGTTGGTTGAACTTGATGGCT +
Preference number: 6 (lower is better)
Translates to: LLMMFTISVSKS*KRSSSWLNLMA
Trigger: AGCCATCAAGTTCAACCAACTGGAGGAACGCTTCCAGCTCTTTGAGACGGATATTGTGAACATCATTAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp TCAAAGAGCTGGAAGCGTTCCTCCAGTTGGTTGAACTaGATGGCTGTTCTATTCTCTGCATCTTTGTGTAAG +
Preference number: 6 (lower is better)
Translates to: SKSWKRSSSWLN*MAVLFSASLCK
Trigger: CTTACACAAAGATGCAGAGAATAGAACAGCCATCAAGTTCAACCAACTGGAGGAACGCTTCCAGCTCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp AGGGTATTATTCAAGGAGGTCAGATCATCTGTGTGTTaGGTAAGGGTATCTGTGCAAGTGGTCCTGACTTCA +
Preference number: 6 (lower is better)
Translates to: RVLFKEVRSSVC*VRVSVQVVLTS
Trigger: TGAAGTCAGGACCACTTGCACAGATACCCTTACCAAACACACAGATGATCTGACCTCCTTGAATAATACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp TGTTGCATCCTGAGAGAAACAGAATCCAAACGGATGTaGGCCAGGGTATTATTCAAGGAGGTCAGATCATCT +
Preference number: 6 (lower is better)
Translates to: CCILRETESKRM*ARVLFKEVRSS
Trigger: AGATGATCTGACCTCCTTGAATAATACCCTGGCCAACATCCGTTTGGATTCTGTTTCTCTCAGGATGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp ATGTTGGCCAGGGTATTATTCAAGGAGGTCAGATCATCTGTGTGTTaGGTAAGGGTATCTGTGCAAGTGGTCCTGACTTCATTTAGATTG +
Preference number: 6 (lower is better)
Translates to: MLARVLFKEVRSSVC*VRVSVQVVLTSFRL
Trigger: CAATCTAAATGAAGTCAGGACCACTTGCACAGATACCCTTACCAAACACACAGATGATCTGACCTCCTTGAATAATACCCTGGCCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS GCA 72 bp ACTTCAGTGTCTAACCTCGACCTCATCAAATCTTGTTaGATCCTGAGAGAAACAGAATCCAAACGGATGTTG +
Preference number: 6 (lower is better)
Translates to: TSVSNLDLIKSC*ILRETESKRML
Trigger: CAACATCCGTTTGGATTCTGTTTCTCTCAGGATGCAACAAGATTTGATGAGGTCGAGGTTAGACACTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp AGTACTGTCTCCCTGTCTTTTTCGCAAATGAAGTTATaGACGTCTTCACATTGGAAATCGTTCCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: STVSLSFSQMKL*TSSHWKSFHCP
Trigger: TGGGCAGTGGAACGATTTCCAATGTGAAGACGTCAATAACTTCATTTGCGAAAAAGACAGGGAGACAGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp ATCAAATCTTGTTGCATCCTGAGAGAAACAGAATCCAAACGGATGTaGGCCAGGGTATTATTCAAGGAGGTCAGATCATCTGTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: IKSCCILRETESKRM*ARVLFKEVRSSVCL
Trigger: CAAACACACAGATGATCTGACCTCCTTGAATAATACCCTGGCCAACATCCGTTTGGATTCTGTTTCTCTCAGGATGCAACAAGATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS TCA 72 bp GGTGGACCTTGTAGTATTGTAAAATTCTTGATGAGCTaGCCATGCTTGGAGTCTACTAGCTTCATTTCTTCC +
Preference number: 6 (lower is better)
Translates to: GGPCSIVKFLMS*PCLESTSFISS
Trigger: GGAAGAAATGAAGCTAGTAGACTCCAAGCATGGTCAGCTCATCAAGAATTTTACAATACTACAAGGTCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp GTCTTTTTCGCAAATGAAGTTATTGACGTCTTCACATaGGAAATCGTTCCACTGCCCAGCATAAATCAACCC +
Preference number: 6 (lower is better)
Translates to: VFFANEVIDVFT*EIVPLPSINQP
Trigger: GGGTTGATTTATGCTGGGCAGTGGAACGATTTCCAATGTGAAGACGTCAATAACTTCATTTGCGAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp TGCTTGGAGTCTACTAGCTTCATTTCTTCCATAATCACTGATAAGTaGGCTACTTCAGTGTCTAACCTCGACCTCATCAAATCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: CLESTSFISSIITDK*ATSVSNLDLIKSCC
Trigger: GCAACAAGATTTGATGAGGTCGAGGTTAGACACTGAAGTAGCCAACTTATCAGTGATTATGGAAGAAATGAAGCTAGTAGACTCCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 72 bp AAACTTCAGTGCCCAGTTATTTTTACATTTGGTACATaGTGTTCCTTCCTGAATACCAAACCGCTTGTAACC +
Preference number: 6 (lower is better)
Translates to: KLQCPVIFTFGT*CSFLNTKPLVT
Trigger: GGTTACAAGCGGTTTGGTATTCAGGAAGGAACACAATGTACCAAATGTAAAAATAACTGGGCACTGAAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400256.5
ENST00000582147.1
CDS CAA 90 bp AAATCAAGTAGAATAGCGGTTGGGTCAAAGGAGAGAAAAATAGGCTaGGTTGCTAACCAAACATTCGAGTTTTGCCAAAGGTTTAATTAT +
Preference number: 6 (lower is better)
Translates to: KSSRIAVGSKERKIG*VANQTFEFCQRFNY
Trigger: ATAATTAAACCTTTGGCAAAACTCGAATGTTTGGTTAGCAACCAAGCCTATTTTTCTCTCCTTTGACCCAACCGCTATTCTACTTGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582147.1