RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COLCA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000214290

Ensembl transcript IDs: ENST00000398035.6, ENST00000526216.1, ENST00000528846.5, ENST00000610738.5, ENST00000614153.4, ENST00000638573.1, ENST00000639470.1

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCATCCAAGTCCTCTaGCTCACACGATGCGCAGTAGCAGATGGAGGTGGTGGCCGAGGA +
Preference number: 1 (lower is better)
Translates to: ARVEVLCCLESIQVL*LTRCAVADGGGGRG
Trigger: TCCTCGGCCACCACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CCA 90 bp CATCCAAGTCCTCTGCCTCACACGATGCGCAGTAGCAGATGGAGGTaGTGGCCGAGGAGAAGCAGCTGTACTGGGCGTGTGAGGACAAGT +
Preference number: 1 (lower is better)
Translates to: HPSPLPHTMRSSRWR*WPRRSSCTGRVRTS
Trigger: ACTTGTCCTCACACGCCCAGTACAGCTGCTTCTCCTCGGCCACCACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAGGACTTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR GCA 90 bp GGGGGCAAAGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTaGCTGGAGAGCATCCAAGTCCTCTGCCTCACACGATGCGCAGTA +
Preference number: 1 (lower is better)
Translates to: GGKVHTVCARVEVLC*LESIQVLCLTRCAV
Trigger: TACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACTTTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CCA 90 bp CTCTGGTTAAAGCAGAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATaGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGC +
Preference number: 1 (lower is better)
Translates to: LWLKQKGVAWKLSGK*CGALCVELSKGSGC
Trigger: GCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTTTAACCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CCA 90 bp GTTAAAGCAGAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATGGTGTaGAGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGCATCTC +
Preference number: 1 (lower is better)
Translates to: VKAERGGLEAVWEMV*STLCGIEQRLRVHL
Trigger: GAGATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CCA 90 bp GGTGATCCTGGGATCAGGCTCTGGTTAAAGCAGAAAGGGGTGGCCTaGAAGCTGTCTGGGAAATGGTGTGGAGCACTTTGTGTGGAATTG +
Preference number: 1 (lower is better)
Translates to: GDPGIRLWLKQKGVA*KLSGKWCGALCVEL
Trigger: CAATTCCACACAAAGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTTTAACCAGAGCCTGATCCCAGGATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR TCA 90 bp CCTGGAAGCTGTCTGGGAAATGGTGTGGAGCACTTTGTGTGGAATTaGGCAAAGGCTCCGGGTGCATCTCTGTCTGAAGGTAGGAATCAA +
Preference number: 1 (lower is better)
Translates to: PGSCLGNGVEHFVWN*AKAPGASLSEGRNQ
Trigger: TTGATTCCTACCTTCAGACAGAGATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCAGACAGCTTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CCA 90 bp TATAGCAGATGTCACAGTTTGTTTCCCTCTTATAGAAATCACTGGTaGCGGCTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCGGGT +
Preference number: 1 (lower is better)
Translates to: YSRCHSLFPSYRNHW*RLLRGQSPHSLCSG
Trigger: ACCCGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAGCCGCCACCAGTGATTTCTATAAGAGGGAAACAAACTGTGACATCTGCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CCA 90 bp AACTATAGCAGATGTCACAGTTTGTTTCCCTCTTATAGAAATCACTaGTGGCGGCTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCG +
Preference number: 1 (lower is better)
Translates to: NYSRCHSLFPSYRNH*WRLLRGQSPHSLCS
Trigger: CGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAGCCGCCACCAGTGATTTCTATAAGAGGGAAACAAACTGTGACATCTGCTATAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR TCA 90 bp ATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATATaGATGCTTAGCATCAGAAAATTGGAAATAGTGACATGTAAACTG +
Preference number: 1 (lower is better)
Translates to: IQSRSGAVTGSEDFI*MLSIRKLEIVTCKL
Trigger: CAGTTTACATGTCACTATTTCCAATTTTCTGATGCTAAGCATTCATATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
3UTR-3UTR CCA 90 bp AATCACTGGTGGCGGCTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCGGGTAGTAGCAGATGGAGGTaGTGGCCGAGGAGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: NHWWRLLRGQSPHSLCSGSSRWR*WPRRSS
Trigger: GCTGCTTCTCCTCGGCCACCACCTCCATCTGCTACT...ACCCGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAGCCGCCACCAGTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CCA 90 bp TGCTGCCTGGAGAGCATCCAAGTCCTCTGCCTCACACGATGCGCAGTAGCAGATCAGAAAGGGGTGGCCTaGAAGCTGTCTGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: CCLESIQVLCLTRCAVADQKGVA*KLSGKW
Trigger: CCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTG...ATCTGCTACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCTCTCCAGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CAA 90 bp GAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATGGTGTGGAGCACTTaGTGTGGAATTGAGCAAAGGCTCCGGGTGCATCTCTGTCTGAAG +
Preference number: 2 (lower is better)
Translates to: ERGGLEAVWEMVWST*CGIEQRLRVHLCLK
Trigger: CTTCAGACAGAGATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCCACCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR TCA 90 bp CCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCATCCAAGTCACTTTGTGTGGAATTaGGCAAAGGCTCCGGGTGCA +
Preference number: 2 (lower is better)
Translates to: PHSLCSGRSTLLPGEHPSHFVWN*AKAPGA
Trigger: TGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTG...ACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CCA 90 bp AGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCATCCAGTAGGAATGGTCTTCTaGGGGGTAGCCACAGGTTCT +
Preference number: 2 (lower is better)
Translates to: SPHSLCSGRSTLLPGEHPVGMVF*GVATGS
Trigger: AGAACCTGTGGCTACCCCCCAGAAGACCATTCCTAC...TGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CCA 90 bp GGCAAAGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCGTCTGGGAAATGGTGTaGAGCACTTTGTGTGGAATT +
Preference number: 2 (lower is better)
Translates to: GKVHTVCARVEVLCCLESVWEMV*STLCGI
Trigger: AATTCCACACAAAGTGCTCCACACCATTTCCCAGAC...GCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACTTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CCA 90 bp CTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCACATGAAACACAACTaGAAAATTCTCCCCGTTGCA +
Preference number: 2 (lower is better)
Translates to: LLRGQSPHSLCSGRSTLLHMKHN*KILPVA
Trigger: TGCAACGGGGAGAATTTTCCAGTTGTGTTTCATGTG...CAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CCA 90 bp CACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCATCCAAGTCCTCCCGTTGCAAATAATTaGGCGTGGAAGAAATTGGTT +
Preference number: 2 (lower is better)
Translates to: HSLCSGRSTLLPGEHPSPPVANN*AWKKLV
Trigger: AACCAATTTCTTCCACGCCCAATTATTTGCAACGGG...AGGACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR TCA 90 bp CACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCATCCAAGTCCTTCTGAGGACTTCATATaGATGCTTAGCATCAGAAAA +
Preference number: 2 (lower is better)
Translates to: HSLCSGRSTLLPGEHPSPSEDFI*MLSIRK
Trigger: TTTTCTGATGCTAAGCATTCATATGAAGTCCTCAGA...AGGACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR GCA 90 bp TGGGAAATGGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGCATGTGACATGTAAACTGTaGTTGGGATATTGTGTTACC +
Preference number: 2 (lower is better)
Translates to: WEMVWSTLCGIEQRLRVHVTCKL*LGYCVT
Trigger: GGTAACACAATATCCCAAGCACAGTTTACATGTCAC...ATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CCA 90 bp TGGGAAATGGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGCATCATGTAAACTGTGCTTaGGATATTGTGTTACCAAGT +
Preference number: 2 (lower is better)
Translates to: WEMVWSTLCGIEQRLRVHHVNCA*DIVLPS
Trigger: ACTTGGTAACACAATATCCCAAGCACAGTTTACATG...ATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CAA 90 bp ATGCTTAGCATCAGAAAATTGGAAATAGTGACATGTAAACTGTGCTaGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCATCTA +
Preference number: 2 (lower is better)
Translates to: MLSIRKLEIVTCKLC*GYCVTKLHILQCHL
Trigger: TAGATGACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGTCACTATTTCCAATTTTCTGATGCTAAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
3UTR CCA 72 bp CCTCTGCCTCACACGATGCGCAGTAGCAGATGGAGGTaGTGGCCGAGGAGAAGCAGCTGTACTGGGCGTGTG +
Preference number: 3 (lower is better)
Translates to: PLPHTMRSSRWR*WPRRSSCTGRV
Trigger: CACACGCCCAGTACAGCTGCTTCTCCTCGGCCACCACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR GCA 72 bp GAAGTACTCTGCTGCCTGGAGAGCATCCAAGTCCTCTaGCTCACACGATGCGCAGTAGCAGATGGAGGTGGT +
Preference number: 3 (lower is better)
Translates to: EVLCCLESIQVL*LTRCAVADGGG
Trigger: ACCACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCTCTCCAGGCAGCAGAGTACTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR GCA 72 bp GTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTaGCTGGAGAGCATCCAAGTCCTCTGCCTCACACGA +
Preference number: 3 (lower is better)
Translates to: VHTVCARVEVLC*LESIQVLCLTR
Trigger: TCGTGTGAGGCAGAGGACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CAA 90 bp GAGGTGGTGGCCGAGGAGAAGCAGCTGTACTGGGCGTGTGAGGACAAGTGTTGGATGGTGTGGAGCACTTaGTGTGGAATTGAGCAAAGG +
Preference number: 3 (lower is better)
Translates to: EVVAEEKQLYWACEDKCWMVWST*CGIEQR
Trigger: CCTTTGCTCAATTCCACACAAAGTGCTCCACACCAT...CCAACACTTGTCCTCACACGCCCAGTACAGCTGCTTCTCCTCGGCCACCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CAA 90 bp AATCACTGGTGGCGGCTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCGGGTACCAAGTTGCATATTTaGCAGTGTCATCTAGACGTG +
Preference number: 3 (lower is better)
Translates to: NHWWRLLRGQSPHSLCSGTKLHI*QCHLDV
Trigger: CACGTCTAGATGACACTGCAAAATATGCAACTTGGT...ACCCGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAGCCGCCACCAGTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CCA 72 bp AAGCAGAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATaGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGC +
Preference number: 3 (lower is better)
Translates to: KQKGVAWKLSGK*CGALCVELSKG
Trigger: GCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CAA 90 bp CTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGAGAGAATGGAGGAATTaGAAGGTGATCCTGGGATCA +
Preference number: 3 (lower is better)
Translates to: LLRGQSPHSLCSGRSTLLREWRN*KVILGS
Trigger: TGATCCCAGGATCACCTTCAAATTCCTCCATTCTCT...CAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR TCA 72 bp TGTCTGGGAAATGGTGTGGAGCACTTTGTGTGGAATTaGGCAAAGGCTCCGGGTGCATCTCTGTCTGAAGGT +
Preference number: 3 (lower is better)
Translates to: CLGNGVEHFVWN*AKAPGASLSEG
Trigger: ACCTTCAGACAGAGATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CAA 90 bp GGCAAAGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCACTGTGCTTGGGATATaGTGTTACCAAGTTGCATAT +
Preference number: 3 (lower is better)
Translates to: GKVHTVCARVEVLCCLESTVLGI*CYQVAY
Trigger: ATATGCAACTTGGTAACACAATATCCCAAGCACAGT...GCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR-3UTR CAA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAACCAAGTTGCATATTTaGCAGTGTCATCTAGACGTG +
Preference number: 3 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFITKLHI*QCHLDV
Trigger: CACGTCTAGATGACACTGCAAAATATGCAACTTGGT...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
3UTR TCA 72 bp AGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATATaGATGCTTAGCATCAGAAAATTGGAAATAGTGACA +
Preference number: 3 (lower is better)
Translates to: RSGAVTGSEDFI*MLSIRKLEIVT
Trigger: TGTCACTATTTCCAATTTTCTGATGCTAAGCATTCATATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp AATCACTGGTGGCGGCTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCGGGTGGAGGCCGCCTGGTGTaGCCGTCTTTGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NHWWRLLRGQSPHSLCSGGGRLV*PSLLQQ
Trigger: CTGCTGCAGCAAAGACGGGCACACCAGGCGGCCTCC...ACCCGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAGCCGCCACCAGTGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR GCA 90 bp AATCACTGGTGGCGGCTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCGGGTGCAGGCTCCGACCTCTaGGTGCCCTTGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NHWWRLLRGQSPHSLCSGAGSDL*VPLVWK
Trigger: CTTCCAGACCAAGGGCACGCAGAGGTCGGAGCCTGC...ACCCGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAGCCGCCACCAGTGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR TCA 90 bp CATCCAAGTCCTCTGCCTCACACGATGCGCAGTAGCAGATGGAGGTGGTGGCCGGTAGGAGTGGCGCTGTaGCCGGGTCTGAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: HPSPLPHTMRSSRWRWWPVGVAL*PGLRTS
Trigger: TGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTAC...CGGCCACCACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAGGACTTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR TCA 90 bp CATCCAAGTCCTCTGCCTCACACGATGCGCAGTAGCAGATGGAGGTGGTGGCCGAGGTACCTGCCAGACTaGCCTAGTAAAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HPSPLPHTMRSSRWRWWPRYLPD*PSKGAR
Trigger: CCTGGCCCCTTTACTAGGTCAGTCTGGCAGGTACCT...CGGCCACCACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAGGACTTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR GCA 90 bp GCTCCGGGTGCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGGTCGAGGCAGCAAAGGTGGACACTGCTaGCTCCGGACCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: APGASLSEGRNQRSGRGSKGGHC*LRTGFP
Trigger: GGGGAACCCGGTCCGGAGGCAGCAGTGTCCACCTTT...GCTGCCTCGACCAGATCTTTGATTCCTACCTTCAGACAGAGATGCACCCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR GCA 90 bp TGCTGCCTGGAGAGCATCCAAGTCCTCTGCCTCACACGATGCGCAGTAGCAGATCTGAAAGGTGGACACTaGTGCCTCCGGACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: CCLESIQVLCLTRCAVADLKGGH*CLRTGF
Trigger: GAACCCGGTCCGGAGGCAGCAGTGTCCACCTTTCAG...ATCTGCTACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCTCTCCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATACCCCCGGAGGCCGCCTaGTGTGCCCGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIPPEAA*CARLCC
Trigger: GCAGCAAAGACGGGCACACCAGGCGGCCTCCGGGGG...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CCA 90 bp AGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGCATCTCTGTCTGAAGGTACCCCCGGAGGCCGCCTaGTGTGCCCGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: STLCGIEQRLRVHLCLKVPPEAA*CARLCC
Trigger: GCAGCAAAGACGGGCACACCAGGCGGCCTCCGGGGG...TACCTTCAGACAGAGATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR GCA 90 bp CTGGAGCATATGAAGGCAGCTGCACTGGCGAGTAACTGTAGTCTAAGGAGCCAGGCTCCGACCTCTGCGTaGCCTTGGTCTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LEHMKAAALASNCSLRSQAPTSA*PWSGSQ
Trigger: CTGGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGC...CTGGCTCCTTAGACTACAGTTACTCGCCAGTGCAGCTGCCTTCATATGCTCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp GAGGTGGTGGCCGAGGAGAAGCAGCTGTACTGGGCGTGTGAGGACAAGTGTTGGGTAGGAATGGTCTTCTaGGGGGTAGCCACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: EVVAEEKQLYWACEDKCWVGMVF*GVATGS
Trigger: AGAACCTGTGGCTACCCCCCAGAAGACCATTCCTAC...CCAACACTTGTCCTCACACGCCCAGTACAGCTGCTTCTCCTCGGCCACCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp GCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGGTCGAGGCAGCTTGAGTTTTTGGCCAGCCCCGTCCTaGGCCGGCGAGGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: ASLSEGRNQRSGRGSLSFWPAPS*AGEVPA
Trigger: GGCAGGTACCTCGCCGGCCCAGGACGGGGCTGGCCA...AAAACTCAAGCTGCCTCGACCAGATCTTTGATTCCTACCTTCAGACAGAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAGCAAGCGGTGAGGTTTaGCCAGCCCCGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIASGEV*PAPSWA
Trigger: GGCCCAGGACGGGGCTGGCCAAACCTCACCGCTTGC...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526216.1
CDS-3UTR CCA 90 bp GATCAGGCTCTGGTTAAAGCAGAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATGTGCGTGCCCTTGGTCTaGAAGCCAGCCCGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: DQALVKAERGGLEAVWEMCVPLV*KPAREQ
Trigger: TTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCA...CATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTTTAACCAGAGCCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR GCA 90 bp GCTCCGGGTGCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGGTCGAGGCAGCTCTGTCTTTGCCTTCTaGCCGCTCTCCCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: APGASLSEGRNQRSGRGSSVFAF*PLSLVP
Trigger: AGGGACGAGGGAGAGCGGGCAGAAGGCAAAGACAGA...GCTGCCTCGACCAGATCTTTGATTCCTACCTTCAGACAGAGATGCACCCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp TGCTGCCTGGAGAGCATCCAAGTCCTCTGCCTCACACGATGCGCAGTAGCAGATGGCCTGGAAGCTGTCTaGGAAATGGTGTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: CCLESIQVLCLTRCAVADGLEAV*EMVWST
Trigger: AGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCC...ATCTGCTACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCTCTCCAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp GCTCCGGGTGCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGGTCGAGGCAGCATGCGCAGTAGCAGATaGAGGTGGTGGCCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: APGASLSEGRNQRSGRGSMRSSR*RWWPRR
Trigger: TCTCCTCGGCCACCACCTCCATCTGCTACTGCGCAT...GCTGCCTCGACCAGATCTTTGATTCCTACCTTCAGACAGAGATGCACCCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp GGCAAAGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCGAGAAGCAGCTGTACTaGGCGTGTGAGGACAAGTGT +
Preference number: 4 (lower is better)
Translates to: GKVHTVCARVEVLCCLESEKQLY*ACEDKC
Trigger: ACACTTGTCCTCACACGCCCAGTACAGCTGCTTCTC...GCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACTTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
3UTR CAA 72 bp GGCCTGGAAGCTGTCTGGGAAATGGTGTGGAGCACTTaGTGTGGAATTGAGCAAAGGCTCCGGGTGCATCTC +
Preference number: 4 (lower is better)
Translates to: GLEAVWEMVWST*CGIEQRLRVHL
Trigger: GAGATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR GCA 90 bp CTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGGTAGAAGTACTCTGCTaGCTGGAGAGCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LLRGQSPHSLCSGRSTLLVEVLC*LESIQV
Trigger: GACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTAC...CAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCATCCAAGTCCTCTATAGAAATCACTGGTaGCGGCTGCTGAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: TVCARVEVLCCLESIQVLYRNHW*RLLRGQ
Trigger: TTGCCCCCTCAGCAGCCGCCACCAGTGATTTCTATA...GAGGACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp GCTCTGGTTAAAGCAGAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATGGTGTGGTCTTATAGAAATCACTaGTGGCGGCTGCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ALVKAERGGLEAVWEMVWSYRNH*WRLLRG
Trigger: CCCCCTCAGCAGCCGCCACCAGTGATTTCTATAAGA...CCACACCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTTTAACCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR TCA 90 bp GATCAGGCTCTGGTTAAAGCAGAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATGCACTTTGTGTGGAATTaGGCAAAGGCTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: DQALVKAERGGLEAVWEMHFVWN*AKAPGA
Trigger: TGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTG...CATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTTTAACCAGAGCCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR GCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAGCTCCCTTCTGTCTTTaGCTTCTGCCCGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIAPFCL*LLPALP
Trigger: AGGGAGAGCGGGCAGAAGGCAAAGACAGAAGGGAGC...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526216.1
CDS-3UTR GCA 90 bp GAAGCTGTCTGGGAAATGGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGCTCGCTCCCTTCTGTCTTTaGCTTCTGCCCGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EAVWEMVWSTLCGIEQRLAPFCL*LLPALP
Trigger: AGGGAGAGCGGGCAGAAGGCAAAGACAGAAGGGAGC...GAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCAGACAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAACTGGGTCTGAAAGGTaGACACTGCTGCCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFITGSER*TLLPPD
Trigger: GTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGT...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CCA 90 bp TGGGAAATGGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGCATCAGAAAGGGGTGGCCTaGAAGCTGTCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: WEMVWSTLCGIEQRLRVHQKGVA*KLSGKW
Trigger: CCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTG...ATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAAGTAGCAGATGGAGGTaGTGGCCGAGGAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFISSRWR*WPRRSS
Trigger: GCTGCTTCTCCTCGGCCACCACCTCCATCTGCTACT...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTGGCCAGCCCCGTCCTaGGCCGGCGAGGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVWPAPS*AGEVPA
Trigger: GGCAGGTACCTCGCCGGCCCAGGACGGGGCTGGCCA...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACTGGAAAATTCTCCCCGTTGCAAATAATTGGGCGTGGAAGAAATTGGTTCAGGACCTCTGCGTGCCCTTaGTCTGGAAGCCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TGKFSPLQIIGRGRNWFRTSACP*SGSQPG
Trigger: CCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGT...CCTGAACCAATTTCTTCCACGCCCAATTATTTGCAACGGGGAGAATTTTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp CAGGGGAATTGTAATTCTCTGGAGCATATGAAGGCAGCTGCACTGGCGAGTAACTTTTCTGGCCAGGTGTaGCTTCTGGGCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: QGNCNSLEHMKAAALASNFSGQV*LLGRLR
Trigger: TCGGAGCCTGCCCAGAAGCCACACCTGGCCAGAAAA...GTTACTCGCCAGTGCAGCTGCCTTCATATGCTCCAGAGAATTACAATTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ATTGAGCAAAGGCTCCGGGTGCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGCTCCATCCGACATCGTaGTCAGCAGGAGCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: IEQRLRVHLCLKVGIKDLLHPTS*SAGAGS
Trigger: CGACCCAGCTCCTGCTGACCACGATGTCGGATGGAG...CAGATCTTTGATTCCTACCTTCAGACAGAGATGCACCCGGAGCCTTTGCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGGGCGGCTCCGGCCCTaGCCACTACCCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVGRLRP*PLPCSV
Trigger: CACACTGCAGGGTAGTGGTCAGGGCCGGAGCCGCCC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR TCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGCTGGGAGGGACCCCTaGGCGCTGGGAGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCAGRDP*ALGAGA
Trigger: TGCCCCTGCTCCCAGCGCTCAGGGGTCCCTCCCAGC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGTCCGGGGCTCCCGATaGCCCTGCACTCCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCVRGSR*PCTPPG
Trigger: TCCCGGCGGAGTGCAGGGTCATCGGGAGCCCCGGAC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR TCA 90 bp CCAGAGAGAATGGAGGAATTTGAAGGTGATCCTGGGATCAGGCTCTGGTTAAAGTGGTGCAACTGGGTCTaGAAGGTGGACACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PERMEEFEGDPGIRLWLKWCNWV*KVDTAA
Trigger: GGCAGCAGTGTCCACCTTTCAGACCCAGTTGCACCA...CTTTAACCAGAGCCTGATCCCAGGATCACCTTCAAATTCCTCCATTCTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR TCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAGCTGTACTGGGCGTGTaGGGACAAGTGTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIAVLGV*GQVLVG
Trigger: TCCTACCAACACTTGTCCTCACACGCCCAGTACAGC...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCCCGGGAGCAAGCGGTaGGGTTTGGCCAGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVPGSKR*GLASPV
Trigger: GACGGGGCTGGCCAAACCTCACCGCTTGCTCCCGGG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATACTCTGCCTCACACGATaGGCAGTAGCAGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFILCLTR*AVADGG
Trigger: ACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAG...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR GCA 90 bp TGGGAAATGGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGCATAGCATCCAAGTCCTCTaGCTCACACGATGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: WEMVWSTLCGIEQRLRVHSIQVL*LTRCAV
Trigger: TACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCT...ATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCCGCGCAGCGCGAGCTaGGGAAAGCCGTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCPRSAS*GKPSGA
Trigger: AGCCCCGGACGGCTTTCCCCAGCTCGCGCTGCGCGG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCCCCCGGAGGCCGCCTaGTGTGCCCGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVPPEAA*CARLCC
Trigger: GCAGCAAAGACGGGCACACCAGGCGGCCTCCGGGGG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAGGCCTGGAAGCTGTCTaGGAAATGGTGTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIGLEAV*EMVWST
Trigger: AGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCC...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CCA 90 bp TTTCTTCACATGAAACACAACTGGAAAATTCTCCCCGTTGCAAATAATTGGGCGGCAAGCGGTGAGGTTTaGCCAGCCCCGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FLHMKHNWKILPVANNWAASGEV*PAPSWA
Trigger: GGCCCAGGACGGGGCTGGCCAAACCTCACCGCTTGC...CGCCCAATTATTTGCAACGGGGAGAATTTTCCAGTTGTGTTTCATGTGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATACACCTTCGGTTTTTCTaGCCAGGTGTGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIHLRFF*PGVASG
Trigger: CCCAGAAGCCACACCTGGCCAGAAAAACCGAAGGTG...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526216.1
CDS-3UTR TCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTTCTCCGAGGCGCACTaGGGCTCCGGGGCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCFSEAH*GSGASP
Trigger: CGGACTCGCCCCGGAGCCTCAGTGCGCCTCGGAGAA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR TCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAGCAGCTCCTTCACTGTaGTCTTCACTCGGACACCTT +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIAAPSL*SSLGHL
Trigger: AAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGC...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR TCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATACACTTTGTGTGGAATTaGGCAAAGGCTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIHFVWN*AKAPGA
Trigger: TGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTG...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR TCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAATTCTCTGGAGCATATaGAGGCAGCTGCACTGGCGA +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIILWSI*RQLHWR
Trigger: TCGCCAGTGCAGCTGCCTTCATATGCTCCAGAGAAT...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR TCA 90 bp GAAGCTGTCTGGGAAATGGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGCTCATTCTCTGGAGCATATaGAGGCAGCTGCACTGGCGA +
Preference number: 4 (lower is better)
Translates to: EAVWEMVWSTLCGIEQRLILWSI*RQLHWR
Trigger: TCGCCAGTGCAGCTGCCTTCATATGCTCCAGAGAAT...GAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCAGACAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCCCGGGAGCAAGCGGTaGGGTTTGGCCAGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCPGSKR*GLASPV
Trigger: GACGGGGCTGGCCAAACCTCACCGCTTGCTCCCGGG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR TCA 90 bp CACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCATCCAAGTCCTTTCACTCGGACACCTTaGTACACCTTCGGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HSLCSGRSTLLPGEHPSPFTRTP*YTFGFS
Trigger: AGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAA...AGGACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTAATCGCGCCGGGAAGTaGGCTGGGTGCGGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCNRAGK*AGCGGR
Trigger: TCGGCCGCCGCACCCAGCGCACTTCCCGGCGCGATT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR GCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATACGGGTAGAAGTACTCTaGTGCCTGGAGAGCATCCAA +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIRVEVL*CLESIQ
Trigger: TTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCG...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGCAGTCGGTGCGCTCTaGCCCCGTCCCAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVAVGAL*PRPRLT
Trigger: AGTGAGCCTGGGACGGGGGCAGAGCGCACCGACTGC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614153.4
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGGGACCCCTGAGCGCTaGGAGCAGGGGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCGTPER*EQGQPQ
Trigger: CTGAGGCTGCCCCTGCTCCCAGCGCTCAGGGGTCCC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCCCCCGGAGGCCGCCTaGTGTGCCCGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCPPEAA*CARLCC
Trigger: GCAGCAAAGACGGGCACACCAGGCGGCCTCCGGGGG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCCCCGGAGGCCGCCTaGTGTGCCCGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCPPEAA*CARLCC
Trigger: GCAGCAAAGACGGGCACACCAGGCGGCCTCCGGGGG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp AGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGCATCTCTGTCTGAAGGTACCTGGGATCAGGCTCTaGTTAAAGCAGAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: STLCGIEQRLRVHLCLKVPGIRL*LKQKGV
Trigger: CACCCCTTTCTGCTTTAACCAGAGCCTGATCCCAGG...TACCTTCAGACAGAGATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAGAGAAGCAGCTGTACTaGGCGTGTGAGGACAAGTGT +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIEKQLY*ACEDKC
Trigger: ACACTTGTCCTCACACGCCCAGTACAGCTGCTTCTC...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATATCTTATAGAAATCACTaGTGGCGGCTGCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFISYRNH*WRLLRG
Trigger: CCCCCTCAGCAGCCGCCACCAGTGATTTCTATAAGA...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCCCGTAGCAGCTTCTaGGCGCGCAGGGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCPRSSF*ARRVRT
Trigger: GGTGCGGACCCTGCGCGCCCAGAAGCTGCTACGGGG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614153.4
CDS-3UTR CCA 90 bp GCTCCGGGTGCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGGTCGAGGCAGCCCCGTTGCAAATAATTaGGCGTGGAAGAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: APGASLSEGRNQRSGRGSPVANN*AWKKLV
Trigger: AACCAATTTCTTCCACGCCCAATTATTTGCAACGGG...GCTGCCTCGACCAGATCTTTGATTCCTACCTTCAGACAGAGATGCACCCGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCACCTCTGCGTGCCCTTaGTCTGGAAGCCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVTSACP*SGSQPG
Trigger: CCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR TCA 90 bp GCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGGTCGAGGCAGCTTGAGTTTTGCAGCTCCTTCACTGTaGTCTTCACTCGGACACCTT +
Preference number: 4 (lower is better)
Translates to: ASLSEGRNQRSGRGSLSFAAPSL*SSLGHL
Trigger: AAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGC...AAAACTCAAGCTGCCTCGACCAGATCTTTGATTCCTACCTTCAGACAGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGGAGGCCGCCTGGTGTaGCCGTCTTTGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCGGRLV*PSLLQQ
Trigger: CTGCTGCAGCAAAGACGGGCACACCAGGCGGCCTCC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGGAGGCCGCCTGGTGTaGCCGTCTTTGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCGGRLV*PSLLQQ
Trigger: CTGCTGCAGCAAAGACGGGCACACCAGGCGGCCTCC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCAAAGGTGGACACTGCTaGCTCCGGACCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVKGGHC*LRTGFP
Trigger: GGGGAACCCGGTCCGGAGGCAGCAGTGTCCACCTTT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTTCCGCGCTCCATCTTaGCCTCCTCCCTCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVFRAPS*PPPSFA
Trigger: GGCGAAGGAGGGAGGAGGGCAAGATGGAGCGCGGAA...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526216.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGCTCCGACCTCTGCGTaGCCTTGGTCTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVAPTSA*PWSGSQ
Trigger: CTGGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGCAGGCTCCGACCTCTaGGTGCCCTTGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVAGSDL*VPLVWK
Trigger: CTTCCAGACCAAGGGCACGCAGAGGTCGGAGCCTGC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR GCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCACAGCTCGGCTCAGTaGAGTCGGTGCGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCHSSAQ*SRCALP
Trigger: GGGCAGAGCGCACCGACTGCACTGAGCCGAGCTGTG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614153.4
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTTTCAAGGTGGAGGTaGCCGCAGGAGTCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCLSRWR*PQESGA
Trigger: CGCCCCGGACTCCTGCGGCCACCTCCACCTTGAAAG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGGCGAGCTTTCAAGGTaGAGGTGGCCGCAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVGELSR*RWPQES
Trigger: GGACTCCTGCGGCCACCTCCACCTTGAAAGCTCGCC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR CCA 90 bp GATCAGGCTCTGGTTAAAGCAGAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATGGCAAATAATTGGGCGTaGAAGAAATTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: DQALVKAERGGLEAVWEMANNWA*KKLVQA
Trigger: AGCCTGAACCAATTTCTTCCACGCCCAATTATTTGC...CATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTTTAACCAGAGCCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp GGCAAAGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGCCTGGAGAGCCATGTAAACTGTGCTTaGGATATTGTGTTACCAAGT +
Preference number: 4 (lower is better)
Translates to: GKVHTVCARVEVLCCLESHVNCA*DIVLPS
Trigger: ACTTGGTAACACAATATCCCAAGCACAGTTTACATG...GCTCTCCAGGCAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGCCAGGTGTGGCTTCTaGGCAGGCTCCGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCARCGF*AGSDLC
Trigger: GCAGAGGTCGGAGCCTGCCCAGAAGCCACACCTGGC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGCCAGGTGTGGCTTCTaGGCAGGCTCCGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCARCGF*AGSDLC
Trigger: GCAGAGGTCGGAGCCTGCCCAGAAGCCACACCTGGC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR TCA 90 bp GCTCTGGTTAAAGCAGAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATGGTGTGGTCTGAGGACTTCATATaGATGCTTAGCATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ALVKAERGGLEAVWEMVWSEDFI*MLSIRK
Trigger: TTTTCTGATGCTAAGCATTCATATGAAGTCCTCAGA...CCACACCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTTTAACCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGTAGGAGTGGCGCTGTaGCCGGGTCTGAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVVGVAL*PGLRTS
Trigger: TGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTAC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCACTACCCTGCAGTGTaGGTCCAGGAATCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCHYPAV*VQESRR
Trigger: CCGGCGCGATTCCTGGACGCACACTGCAGGGTAGTG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR GCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTAAAGGTGGACACTGCTaGCTCCGGACCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCKGGHC*LRTGFP
Trigger: GGGGAACCCGGTCCGGAGGCAGCAGTGTCCACCTTT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTAAAGGTGGACACTGCTaGCTCCGGACCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCKGGHC*LRTGFP
Trigger: GGGGAACCCGGTCCGGAGGCAGCAGTGTCCACCTTT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCTGAAAGGTGGACACTaGTGCCTCCGGACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVLKGGH*CLRTGF
Trigger: GAACCCGGTCCGGAGGCAGCAGTGTCCACCTTTCAG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACTGGAAAATTCTCCCCGTTGCAAATAATTGGGCGTGGAAGAAATTGGTTCAGGCGGGTAGAAGTACTCTaGTGCCTGGAGAGCATCCAA +
Preference number: 4 (lower is better)
Translates to: TGKFSPLQIIGRGRNWFRRVEVL*CLESIQ
Trigger: TTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCG...CCTGAACCAATTTCTTCCACGCCCAATTATTTGCAACGGGGAGAATTTTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTCAAGAGGGGTTCGCTaGGAGGGACCCCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCSRGVR*EGPLSA
Trigger: AGCGCTCAGGGGTCCCTCCCAGCGAACCCCTCTTGA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR CCA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAGTCTGGGAAATGGTGTaGAGCACTTTGTGTGGAATT +
Preference number: 4 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIVWEMV*STLCGI
Trigger: AATTCCACACAAAGTGCTCCACACCATTTCCCAGAC...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CCA 90 bp TTTCTTCACATGAAACACAACTGGAAAATTCTCCCCGTTGCAAATAATTGGGCGAGTAGCAGATGGAGGTaGTGGCCGAGGAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLHMKHNWKILPVANNWASSRWR*WPRRSS
Trigger: GCTGCTTCTCCTCGGCCACCACCTCCATCTGCTACT...CGCCCAATTATTTGCAACGGGGAGAATTTTCCAGTTGTGTTTCATGTGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTTGCGTGCCCTTGGTCTaGAAGCCAGCCCGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCCVPLV*KPAREQ
Trigger: TTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCA...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCTCCATCCGACATCGTaGTCAGCAGGAGCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVLHPTS*SAGAGS
Trigger: CGACCCAGCTCCTGCTGACCACGATGTCGGATGGAG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCCCGAAAAGCCGCAGTaGGTAGGTTGGGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCPEKPQ*VGWGLA
Trigger: AGCCAGTCCCCAACCTACTCACTGCGGCTTTTCGGG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTGGTGCAACTGGGTCTaGAAGGTGGACACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVWCNWV*KVDTAA
Trigger: GGCAGCAGTGTCCACCTTTCAGACCCAGTTGCACCA...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGTAGGAGTGGCGCTGTaGCCGGGTCTGAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCVGVAL*PGLRTS
Trigger: TGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTAC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGTAGGAGTGGCGCTGTaGCCGGGTCTGAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCVGVAL*PGLRTS
Trigger: TGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTAC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCAGGTACCTGCCAGACTaGCCTAGTAAAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVRYLPD*PSKGAR
Trigger: CCTGGCCCCTTTACTAGGTCAGTCTGGCAGGTACCT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR GCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCTGAAAGGTGGACACTaGTGCCTCCGGACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCLKGGH*CLRTGF
Trigger: GAACCCGGTCCGGAGGCAGCAGTGTCCACCTTTCAG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTGAAAGGTGGACACTaGTGCCTCCGGACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCLKGGH*CLRTGF
Trigger: GAACCCGGTCCGGAGGCAGCAGTGTCCACCTTTCAG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTTTCCCCTCCCTTTCTaGGGCAGGCGTTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVFPLPF*GRRFSE
Trigger: CTCGGAGAAACGCCTGCCCCAGAAAGGGAGGGGAAA...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCACTGGGTCTGAAAGGTaGACACTGCTGCCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVTGSER*TLLPPD
Trigger: GTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCAGTAGCAGATGGAGGTaGTGGCCGAGGAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVSSRWR*WPRRSS
Trigger: GCTGCTTCTCCTCGGCCACCACCTCCATCTGCTACT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCATGCGCAGTAGCAGATaGAGGTGGTGGCCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVMRSSR*RWWPRR
Trigger: TCTCCTCGGCCACCACCTCCATCTGCTACTGCGCAT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTTTTCTGGCCAGGTGTaGCTTCTGGGCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVFSGQV*LLGRLR
Trigger: TCGGAGCCTGCCCAGAAGCCACACCTGGCCAGAAAA...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR TCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTGGTGCAACTGGGTCTaGAAGGTGGACACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCWCNWV*KVDTAA
Trigger: GGCAGCAGTGTCCACCTTTCAGACCCAGTTGCACCA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTTGGTGCAACTGGGTCTaGAAGGTGGACACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCWCNWV*KVDTAA
Trigger: GGCAGCAGTGTCCACCTTTCAGACCCAGTTGCACCA...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTGGTGTGCCCGTCTTTaGTGCAGCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVWCARL*CSSSFT
Trigger: AGTGAAGGAGCTGCTGCAGCAAAGACGGGCACACCA...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCTCTGCCTCACACGATaGGCAGTAGCAGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVLCLTR*AVADGG
Trigger: ACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTCTGTCTTTGCCTTCTaGCCGCTCTCCCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCSVFAF*PLSLVP
Trigger: AGGGACGAGGGAGAGCGGGCAGAAGGCAAAGACAGA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526216.1
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGCTCCCTTCTGTCTTTaGCTTCTGCCCGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCAPFCL*LLPALP
Trigger: AGGGAGAGCGGGCAGAAGGCAAAGACAGAAGGGAGC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526216.1
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGGCCGGCGAGGTACCTaGCAGACTGACCTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCGRRGT*QTDLVK
Trigger: CTTTACTAGGTCAGTCTGGCAGGTACCTCGCCGGCC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGGCCGGCGAGGTACCTaGCAGACTGACCTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCGRRGT*QTDLVK
Trigger: CTTTACTAGGTCAGTCTGGCAGGTACCTCGCCGGCC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTACTGGGTCTGAAAGGTaGACACTGCTGCCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCTGSER*TLLPPD
Trigger: GTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTACTGGGTCTGAAAGGTaGACACTGCTGCCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCTGSER*TLLPPD
Trigger: GTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ATTGAGCAAAGGCTCCGGGTGCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGCACATGAAACACAACTaGAAAATTCTCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: IEQRLRVHLCLKVGIKDLHMKHN*KILPVA
Trigger: TGCAACGGGGAGAATTTTCCAGTTGTGTTTCATGTG...CAGATCTTTGATTCCTACCTTCAGACAGAGATGCACCCGGAGCCTTTGCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTATGCGCAGTAGCAGATaGAGGTGGTGGCCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCMRSSR*RWWPRR
Trigger: TCTCCTCGGCCACCACCTCCATCTGCTACTGCGCAT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTATGCGCAGTAGCAGATaGAGGTGGTGGCCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCMRSSR*RWWPRR
Trigger: TCTCCTCGGCCACCACCTCCATCTGCTACTGCGCAT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGCAGCTCCTTCACTGTaGTCTTCACTCGGACACCTT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVAAPSL*SSLGHL
Trigger: AAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCACTTTGTGTGGAATTaGGCAAAGGCTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVHFVWN*AKAPGA
Trigger: TGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCATTCTCTGGAGCATATaGAGGCAGCTGCACTGGCGA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVILWSI*RQLHWR
Trigger: TCGCCAGTGCAGCTGCCTTCATATGCTCCAGAGAAT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGCTGTACTGGGCGTGTaGGGACAAGTGTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCAVLGV*GQVLVG
Trigger: TCCTACCAACACTTGTCCTCACACGCCCAGTACAGC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGCTGTACTGGGCGTGTaGGGACAAGTGTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCAVLGV*GQVLVG
Trigger: TCCTACCAACACTTGTCCTCACACGCCCAGTACAGC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCGCTGTGACCGGGTCTaGGGACTTCATATGAATGCT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVRCDRV*GLHMNA
Trigger: AGCATTCATATGAAGTCCTCAGACCCGGTCACAGCG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTGGTGTGCCCGTCTTTaGTGCAGCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCWCARL*CSSSFT
Trigger: AGTGAAGGAGCTGCTGCAGCAAAGACGGGCACACCA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTTGGTGTGCCCGTCTTTaGTGCAGCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCWCARL*CSSSFT
Trigger: AGTGAAGGAGCTGCTGCAGCAAAGACGGGCACACCA...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCTCTGCCTCACACGATaGGCAGTAGCAGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCLCLTR*AVADGG
Trigger: ACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTCTGCCTCACACGATaGGCAGTAGCAGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCLCLTR*AVADGG
Trigger: ACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCAGCATCCAAGTCCTCTaGCTCACACGATGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVSIQVL*LTRCAV
Trigger: TACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCGGGTAGAAGTACTCTaGTGCCTGGAGAGCATCCAA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVRVEVL*CLESIQ
Trigger: TTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGGCCTGGAAGCTGTCTaGGAAATGGTGTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCGLEAV*EMVWST
Trigger: AGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGGCCTGGAAGCTGTCTaGGAAATGGTGTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCGLEAV*EMVWST
Trigger: AGTGCTCCACACCATTTCCCAGACAGCTTCCAGGCC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCAGAAAGGGGTGGCCTaGAAGCTGTCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCQKGVA*KLSGKW
Trigger: CCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCAGAAAGGGGTGGCCTaGAAGCTGTCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCQKGVA*KLSGKW
Trigger: CCATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCCTGGGATCAGGCTCTaGTTAAAGCAGAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVPGIRL*LKQKGV
Trigger: CACCCCTTTCTGCTTTAACCAGAGCCTGATCCCAGG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGTAGGAATGGTCTTCTaGGGGGTAGCCACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVVGMVF*GVATGS
Trigger: AGAACCTGTGGCTACCCCCCAGAAGACCATTCCTAC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTATAGAAATCACTGGTaGCGGCTGCTGAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVYRNHW*RLLRGQ
Trigger: TTGCCCCCTCAGCAGCCGCCACCAGTGATTTCTATA...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCACCTTCGGTTTTTCTaGCCAGGTGTGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCHLRFF*PGVASG
Trigger: CCCAGAAGCCACACCTGGCCAGAAAAACCGAAGGTG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGTTTTTCCGACATCGTaGTCAGCAGGAGCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCVFPTS*SAGAGS
Trigger: CGACCCAGCTCCTGCTGACCACGATGTCGGAAAAAC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000610738.5
CDS-3UTR TCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGCAGCTCCTTCACTGTaGTCTTCACTCGGACACCTT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCAAPSL*SSLGHL
Trigger: AAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCACTTTGTGTGGAATTaGGCAAAGGCTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCHFVWN*AKAPGA
Trigger: TGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCACTTTGTGTGGAATTaGGCAAAGGCTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCHFVWN*AKAPGA
Trigger: TGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTATTCTCTGGAGCATATaGAGGCAGCTGCACTGGCGA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCILWSI*RQLHWR
Trigger: TCGCCAGTGCAGCTGCCTTCATATGCTCCAGAGAAT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCGCTGTGACCGGGTCTaGGGACTTCATATGAATGCT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCRCDRV*GLHMNA
Trigger: AGCATTCATATGAAGTCCTCAGACCCGGTCACAGCG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGCTGTGACCGGGTCTaGGGACTTCATATGAATGCT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCRCDRV*GLHMNA
Trigger: AGCATTCATATGAAGTCCTCAGACCCGGTCACAGCG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTAGCATCCAAGTCCTCTaGCTCACACGATGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCSIQVL*LTRCAV
Trigger: TACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTAGCATCCAAGTCCTCTaGCTCACACGATGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCSIQVL*LTRCAV
Trigger: TACTGCGCATCGTGTGAGGCAGAGGACTTGGATGCT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGTAGAAGTACTCTGCTaGCTGGAGAGCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVVEVLC*LESIQV
Trigger: GACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTAC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGGGTAGAAGTACTCTaGTGCCTGGAGAGCATCCAA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCRVEVL*CLESIQ
Trigger: TTGGATGCTCTCCAGGCAGCAGAGTACTTCTACCCG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp GCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGGTCGAGGCAGCTTGAGTTTTGTGACATGTAAACTGTaGTTGGGATATTGTGTTACC +
Preference number: 4 (lower is better)
Translates to: ASLSEGRNQRSGRGSLSFVTCKL*LGYCVT
Trigger: GGTAACACAATATCCCAAGCACAGTTTACATGTCAC...AAAACTCAAGCTGCCTCGACCAGATCTTTGATTCCTACCTTCAGACAGAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCTGGGATCAGGCTCTaGTTAAAGCAGAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCPGIRL*LKQKGV
Trigger: CACCCCTTTCTGCTTTAACCAGAGCCTGATCCCAGG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGTAGGAATGGTCTTCTaGGGGGTAGCCACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCVGMVF*GVATGS
Trigger: AGAACCTGTGGCTACCCCCCAGAAGACCATTCCTAC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGTAGGAATGGTCTTCTaGGGGGTAGCCACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCVGMVF*GVATGS
Trigger: AGAACCTGTGGCTACCCCCCAGAAGACCATTCCTAC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGAGAAGCAGCTGTACTaGGCGTGTGAGGACAAGTGT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCEKQLY*ACEDKC
Trigger: ACACTTGTCCTCACACGCCCAGTACAGCTGCTTCTC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGAGAAGCAGCTGTACTaGGCGTGTGAGGACAAGTGT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCEKQLY*ACEDKC
Trigger: ACACTTGTCCTCACACGCCCAGTACAGCTGCTTCTC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTATAGAAATCACTGGTaGCGGCTGCTGAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCYRNHW*RLLRGQ
Trigger: TTGCCCCCTCAGCAGCCGCCACCAGTGATTTCTATA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTTATAGAAATCACTGGTaGCGGCTGCTGAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCYRNHW*RLLRGQ
Trigger: TTGCCCCCTCAGCAGCCGCCACCAGTGATTTCTATA...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTCTTATAGAAATCACTaGTGGCGGCTGCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCSYRNH*WRLLRG
Trigger: CCCCCTCAGCAGCCGCCACCAGTGATTTCTATAAGA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTTCTTATAGAAATCACTaGTGGCGGCTGCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCSYRNH*WRLLRG
Trigger: CCCCCTCAGCAGCCGCCACCAGTGATTTCTATAAGA...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGTAGAAGTACTCTGCTaGCTGGAGAGCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCVEVLC*LESIQV
Trigger: GACTTGGATGCTCTCCAGGCAGCAGAGTACTTCTAC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTTTCACTCGGACACCTTaGTACACCTTCGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCFTRTP*YTFGFS
Trigger: GGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAA...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398035.6
ENST00000610738.5
CDS-3UTR TCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTTCACTCGGACACCTTaGTACACCTTCGGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCFTRTP*YTFGFS
Trigger: CGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614153.4
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGTCTGGGAAATGGTGTaGAGCACTTTGTGTGGAATT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVVWEMV*STLCGI
Trigger: AATTCCACACAAAGTGCTCCACACCATTTCCCAGAC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTTTCACTCGGACACCTTaGTACACCTTCGGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCFTRTP*YTFGFS
Trigger: AGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAA...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000526216.1
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGCAAATAATTGGGCGTaGAAGAAATTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVANNWA*KKLVQA
Trigger: AGCCTGAACCAATTTCTTCCACGCCCAATTATTTGC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCCCGTTGCAAATAATTaGGCGTGGAAGAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVPVANN*AWKKLV
Trigger: AACCAATTTCTTCCACGCCCAATTATTTGCAACGGG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCACATGAAACACAACTaGAAAATTCTCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVHMKHN*KILPVA
Trigger: TGCAACGGGGAGAATTTTCCAGTTGTGTTTCATGTG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGTCTGGGAAATGGTGTaGAGCACTTTGTGTGGAATT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCVWEMV*STLCGI
Trigger: AATTCCACACAAAGTGCTCCACACCATTTCCCAGAC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGTCTGGGAAATGGTGTaGAGCACTTTGTGTGGAATT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCVWEMV*STLCGI
Trigger: AATTCCACACAAAGTGCTCCACACCATTTCCCAGAC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGTGACATGTAAACTGTaGTTGGGATATTGTGTTACC +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVVTCKL*LGYCVT
Trigger: GGTAACACAATATCCCAAGCACAGTTTACATGTCAC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGCAAATAATTGGGCGTaGAAGAAATTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCANNWA*KKLVQA
Trigger: AGCCTGAACCAATTTCTTCCACGCCCAATTATTTGC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGCAAATAATTGGGCGTaGAAGAAATTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCANNWA*KKLVQA
Trigger: AGCCTGAACCAATTTCTTCCACGCCCAATTATTTGC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCCGTTGCAAATAATTaGGCGTGGAAGAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCPVANN*AWKKLV
Trigger: AACCAATTTCTTCCACGCCCAATTATTTGCAACGGG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCCCGTTGCAAATAATTaGGCGTGGAAGAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCPVANN*AWKKLV
Trigger: AACCAATTTCTTCCACGCCCAATTATTTGCAACGGG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCACATGAAACACAACTaGAAAATTCTCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCHMKHN*KILPVA
Trigger: TGCAACGGGGAGAATTTTCCAGTTGTGTTTCATGTG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCACATGAAACACAACTaGAAAATTCTCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCHMKHN*KILPVA
Trigger: TGCAACGGGGAGAATTTTCCAGTTGTGTTTCATGTG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
3UTR CAA 72 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTaGCATATTTTGCAGTGTCATCTAGACGTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTK*HILQCHLDVVE
Trigger: TTCTACCACGTCTAGATGACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTCTGAGGACTTCATATaGATGCTTAGCATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVSEDFI*MLSIRK
Trigger: TTTTCTGATGCTAAGCATTCATATGAAGTCCTCAGA...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR GCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGTGACATGTAAACTGTaGTTGGGATATTGTGTTACC +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCVTCKL*LGYCVT
Trigger: GGTAACACAATATCCCAAGCACAGTTTACATGTCAC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCATGTAAACTGTGCTTaGGATATTGTGTTACCAAGT +
Preference number: 4 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVHVNCA*DIVLPS
Trigger: ACTTGGTAACACAATATCCCAAGCACAGTTTACATG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR TCA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTTCTGAGGACTTCATATaGATGCTTAGCATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCSEDFI*MLSIRK
Trigger: TTTTCTGATGCTAAGCATTCATATGAAGTCCTCAGA...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CCA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCATGTAAACTGTGCTTaGGATATTGTGTTACCAAGT +
Preference number: 4 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCHVNCA*DIVLPS
Trigger: ACTTGGTAACACAATATCCCAAGCACAGTTTACATG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS GCA 90 bp GCAGGAGTCCGGGGCGGCTCCGGCCCTGACCACTACCCTGCAGTGTaGGTCCAGGAATCGCGCCGGGAAGTGCGCTGGGTGCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: AGVRGGSGPDHYPAV*VQESRREVRWVRRP
Trigger: CGGCCGCCGCACCCAGCGCACTTCCCGGCGCGATTCCTGGACGCACACTGCAGGGTAGTGGTCAGGGCCGGAGCCGCCCCGGACTCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS GCA 90 bp CGGGGTCCGCGCAGGGACCGCCACAGCTCGGCTCAGTGCAGTCGGTaGGCTCTGCCCCCGTCCCAGGCTCACTGTGAGCCTCTAGCTCCC +
Preference number: 5 (lower is better)
Translates to: RGPRRDRHSSAQCSR*ALPPSQAHCEPLAP
Trigger: GGGAGCTAGAGGCTCACAGTGAGCCTGGGACGGGGGCAGAGCGCACCGACTGCACTGAGCCGAGCTGTGGCGGTCCCTGCGCGGACCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528846.5
ENST00000614153.4
CDS CCA 90 bp CACTACCCTGCAGTGTGCGTCCAGGAATCGCGCCGGGAAGTGCGCTaGGTGCGGCGGCCGAGGGTGACCGCGCGTTCAGCCTGGACGCCT +
Preference number: 5 (lower is better)
Translates to: HYPAVCVQESRREVR*VRRPRVTARSAWTP
Trigger: AGGCGTCCAGGCTGAACGCGCGGTCACCCTCGGCCGCCGCACCCAGCGCACTTCCCGGCGCGATTCCTGGACGCACACTGCAGGGTAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS CCA 90 bp GGGGACTGGCTGTTAGGCCAAGCCGAGCCGGGCGAGCTTTCAAGGTaGAGGTGGCCGCAGGAGTCCGGGGCGGCTCCGGCCCTGACCACT +
Preference number: 5 (lower is better)
Translates to: GDWLLGQAEPGELSR*RWPQESGAAPALTT
Trigger: AGTGGTCAGGGCCGGAGCCGCCCCGGACTCCTGCGGCCACCTCCACCTTGAAAGCTCGCCCGGCTCGGCTTGGCCTAACAGCCAGTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS TCA 90 bp ACCTCTGCGTGCCCTTGGTCTGGAAGCCAGCCCGGGAGCAAGCGGTaGGGTTTGGCCAGCCCCGTCCTGGGCCGGCGAGGTACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: TSACPWSGSQPGSKR*GLASPVLGRRGTCQ
Trigger: CTGGCAGGTACCTCGCCGGCCCAGGACGGGGCTGGCCAAACCTCACCGCTTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS CCA 90 bp CGTGCCCTTGGTCTGGAAGCCAGCCCGGGAGCAAGCGGTGAGGTTTaGCCAGCCCCGTCCTGGGCCGGCGAGGTACCTGCCAGACTGACC +
Preference number: 5 (lower is better)
Translates to: RALGLEASPGASGEV*PAPSWAGEVPARLT
Trigger: GGTCAGTCTGGCAGGTACCTCGCCGGCCCAGGACGGGGCTGGCCAAACCTCACCGCTTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS TCA 90 bp AGGTTTGGCCAGCCCCGTCCTGGGCCGGCGAGGTACCTGCCAGACTaGCCTAGTAAAGGGGCCAGGCCCGAGGAACTCCCTCCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: RFGQPRPGPARYLPD*PSKGARPEELPPSL
Trigger: GAGCGAGGGAGGGAGTTCCTCGGGCCTGGCCCCTTTACTAGGTCAGTCTGGCAGGTACCTCGCCGGCCCAGGACGGGGCTGGCCAAACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS CCA 90 bp AGGTGTGGCTTCTGGGCAGGCTCCGACCTCTGCGTGCCCTTGGTCTaGAAGCCAGCCCGGGAGCAAGCGGTGAGGTTTGGCCAGCCCCGT +
Preference number: 5 (lower is better)
Translates to: RCGFWAGSDLCVPLV*KPAREQAVRFGQPR
Trigger: ACGGGGCTGGCCAAACCTCACCGCTTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGCCTGCCCAGAAGCCACACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS GCA 90 bp GACACTGCTGCCTCCGGACCGGGTTCCCCCGGAGGCCGCCTGGTGTaGCCGTCTTTGCTGCAGCAGCTCCTTCACTGTGATCTTCACTCG +
Preference number: 5 (lower is better)
Translates to: DTAASGPGSPGGRLV*PSLLQQLLHCDLHS
Trigger: CGAGTGAAGATCACAGTGAAGGAGCTGCTGCAGCAAAGACGGGCACACCAGGCGGCCTCCGGGGGAACCCGGTCCGGAGGCAGCAGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000528846.5
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS GCA 90 bp TCGGTTTTTCTGGCCAGGTGTGGCTTCTGGGCAGGCTCCGACCTCTaGGTGCCCTTGGTCTGGAAGCCAGCCCGGGAGCAAGCGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SVFLARCGFWAGSDL*VPLVWKPAREQAVR
Trigger: CCTCACCGCTTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGCCTGCCCAGAAGCCACACCTGGCCAGAAAAACCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS CCA 90 bp TCAAAATACAGTCCTGCAGAAGATGGTGCAACTGGGTCTGAAAGGTaGACACTGCTGCCTCCGGACCGGGTTCCCCCGGAGGCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: SKYSPAEDGATGSER*TLLPPDRVPPEAAW
Trigger: CCAGGCGGCCTCCGGGGGAACCCGGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTTGCACCATCTTCTGCAGGACTGTATTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000528846.5
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp CAGGGGAATTGTAATTCTCTGGAGCATATGAAGGCAGCTGCACTGGCGAGTAACGACCTCTGCGTGCCCTaGGTCTGGAAGCCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: QGNCNSLEHMKAAALASNDLCVP*VWKPAR
Trigger: CCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGTC...GTTACTCGCCAGTGCAGCTGCCTTCATATGCTCCAGAGAATTACAATTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp GATCAGGCTCTGGTTAAAGCAGAAAGGGGTGGCCTGGAAGCTGTCTGGGAAATGGCACTTTGTGTGGAATaGAGCAAAGGCTCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: DQALVKAERGGLEAVWEMALCVE*SKGSGC
Trigger: GCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGC...CATTTCCCAGACAGCTTCCAGGCCACCCCTTTCTGCTTTAACCAGAGCCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp GAGGTGGTGGCCGAGGAGAAGCAGCTGTACTGGGCGTGTGAGGACAAGTGTTGGACCAAGTTGCATATTTaGCAGTGTCATCTAGACGTG +
Preference number: 5 (lower is better)
Translates to: EVVAEEKQLYWACEDKCWTKLHI*QCHLDV
Trigger: CACGTCTAGATGACACTGCAAAATATGCAACTTGGT...CCAACACTTGTCCTCACACGCCCAGTACAGCTGCTTCTCCTCGGCCACCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAGCACTTTGTGTGGAATaGAGCAAAGGCTCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIALCVE*SKGSGC
Trigger: GCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGC...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CAA 90 bp CATCCAAGTCCTCTGCCTCACACGATGCGCAGTAGCAGATGGAGGTGGTGGCCGACATGTAAACTGTGCTaGGGATATTGTGTTACCAAG +
Preference number: 5 (lower is better)
Translates to: HPSPLPHTMRSSRWRWWPTCKLC*GYCVTK
Trigger: CTTGGTAACACAATATCCCAAGCACAGTTTACATGT...CGGCCACCACCTCCATCTGCTACTGCGCATCGTGTGAGGCAGAGGACTTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGACCTCTGCGTGCCCTaGGTCTGGAAGCCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVDLCVP*VWKPAR
Trigger: CCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGTC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TGGGAAATGGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGCATCTTCACTCGGACACCTaGATACACCTTCGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: WEMVWSTLCGIEQRLRVHLHSDT*IHLRFF
Trigger: GAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAG...ATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp CTGGAGCATATGAAGGCAGCTGCACTGGCGAGTAACTGTAGTCTAAGGAGCCAGTGGGCGTGGAAGAAATaGGTTCAGGCTCAAAATACA +
Preference number: 5 (lower is better)
Translates to: LEHMKAAALASNCSLRSQWAWKK*VQAQNT
Trigger: TGTATTTTGAGCCTGAACCAATTTCTTCCACGCCCA...CTGGCTCCTTAGACTACAGTTACTCGCCAGTGCAGCTGCCTTCATATGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp CTGCTGAGGGGGCAAAGTCCACACAGTCTGTGCTCGGGTAGAAGTACTCTGCTGACTGTGCTTGGGATATaGTGTTACCAAGTTGCATAT +
Preference number: 5 (lower is better)
Translates to: LLRGQSPHSLCSGRSTLLTVLGI*CYQVAY
Trigger: ATATGCAACTTGGTAACACAATATCCCAAGCACAGT...CAGCAGAGTACTTCTACCCGAGCACAGACTGTGTGGACTTTGCCCCCTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATACTTCACTCGGACACCTaGATACACCTTCGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFILHSDT*IHLRFF
Trigger: GAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAG...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CAA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAGGAAAATTCTCCCCGTaGCAAATAATTGGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIGKFSP*QIIGRG
Trigger: TCCACGCCCAATTATTTGCAACGGGGAGAATTTTCC...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CAA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAATGGTGTGGAGCACTTaGTGTGGAATTGAGCAAAGG +
Preference number: 5 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIMVWST*CGIEQR
Trigger: CCTTTGCTCAATTCCACACAAAGTGCTCCACACCAT...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CAA 90 bp TGGGAAATGGTGTGGAGCACTTTGTGTGGAATTGAGCAAAGGCTCCGGGTGCATAGAGAATGGAGGAATTaGAAGGTGATCCTGGGATCA +
Preference number: 5 (lower is better)
Translates to: WEMVWSTLCGIEQRLRVHREWRN*KVILGS
Trigger: TGATCCCAGGATCACCTTCAAATTCCTCCATTCTCT...ATGCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGCTCCACACCATTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp ATTGAGCAAAGGCTCCGGGTGCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGGGAAAATTCTCCCCGTaGCAAATAATTGGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: IEQRLRVHLCLKVGIKDLGKFSP*QIIGRG
Trigger: TCCACGCCCAATTATTTGCAACGGGGAGAATTTTCC...CAGATCTTTGATTCCTACCTTCAGACAGAGATGCACCCGGAGCCTTTGCTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAAGAGAATGGAGGAATTaGAAGGTGATCCTGGGATCA +
Preference number: 5 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFIREWRN*KVILGS
Trigger: TGATCCCAGGATCACCTTCAAATTCCTCCATTCTCT...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTTTCCGCGCTCCATCTaGCCCTCCTCCCTCCTTCGC +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCFPRSI*PSSLLR
Trigger: GCGAAGGAGGGAGGAGGGCAAGATGGAGCGCGGAAA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526216.1
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTGGTGTGCCCGTCTTaGCTGCAGCAGCTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCLVCPS*LQQLLH
Trigger: GTGAAGGAGCTGCTGCAGCAAAGACGGGCACACCAG...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGCACTTTGTGTGGAATaGAGCAAAGGCTCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVALCVE*SKGSGC
Trigger: GCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAACTGTGCTTGGGATATaGTGTTACCAAGTTGCATAT +
Preference number: 5 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFITVLGI*CYQVAY
Trigger: ATATGCAACTTGGTAACACAATATCCCAAGCACAGT...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CAA 90 bp ACTATGAGCATACAAAGTAGGAGTGGCGCTGTGACCGGGTCTGAGGACTTCATAACATGTAAACTGTGCTaGGGATATTGTGTTACCAAG +
Preference number: 5 (lower is better)
Translates to: TMSIQSRSGAVTGSEDFITCKLC*GYCVTK
Trigger: CTTGGTAACACAATATCCCAAGCACAGTTTACATGT...TATGAAGTCCTCAGACCCGGTCACAGCGCCACTCCTACTTTGTATGCTCATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000614153.4
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGCACTTTGTGTGGAATaGAGCAAAGGCTCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCALCVE*SKGSGC
Trigger: GCACCCGGAGCCTTTGCTCAATTCCACACAAAGTGC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TTTCTTCACATGAAACACAACTGGAAAATTCTCCCCGTTGCAAATAATTGGGCGATGGTGTGGAGCACTTaGTGTGGAATTGAGCAAAGG +
Preference number: 5 (lower is better)
Translates to: FLHMKHNWKILPVANNWAMVWST*CGIEQR
Trigger: CCTTTGCTCAATTCCACACAAAGTGCTCCACACCAT...CGCCCAATTATTTGCAACGGGGAGAATTTTCCAGTTGTGTTTCATGTGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp ATTGAGCAAAGGCTCCGGGTGCATCTCTGTCTGAAGGTAGGAATCAAAGATCTGAGCAGATGTCACAGTTaGTTTCCCTCTTATAGAAAT +
Preference number: 5 (lower is better)
Translates to: IEQRLRVHLCLKVGIKDLSRCHS*FPSYRN
Trigger: ATTTCTATAAGAGGGAAACAAACTGTGACATCTGCT...CAGATCTTTGATTCCTACCTTCAGACAGAGATGCACCCGGAGCCTTTGCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639470.1
CDS-3UTR CAA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCCTTCACTCGGACACCTaGATACACCTTCGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVLHSDT*IHLRFF
Trigger: GAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAG...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCGGAAAATTCTCCCCGTaGCAAATAATTGGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVGKFSP*QIIGRG
Trigger: TCCACGCCCAATTATTTGCAACGGGGAGAATTTTCC...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTCTTCACTCGGACACCTaGATACACCTTCGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCLHSDT*IHLRFF
Trigger: GAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAG...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCTGGGCGTGGAAGAAATaGGTTCAGGCTCAAAATACA +
Preference number: 5 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVWAWKK*VQAQNT
Trigger: TGTATTTTGAGCCTGAACCAATTTCTTCCACGCCCA...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTGGAAAATTCTCCCCGTaGCAAATAATTGGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCGKFSP*QIIGRG
Trigger: TCCACGCCCAATTATTTGCAACGGGGAGAATTTTCC...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTGGAAAATTCTCCCCGTaGCAAATAATTGGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCGKFSP*QIIGRG
Trigger: TCCACGCCCAATTATTTGCAACGGGGAGAATTTTCC...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTATGGTGTGGAGCACTTaGTGTGGAATTGAGCAAAGG +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCMVWST*CGIEQR
Trigger: CCTTTGCTCAATTCCACACAAAGTGCTCCACACCAT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTATGGTGTGGAGCACTTaGTGTGGAATTGAGCAAAGG +
Preference number: 5 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCMVWST*CGIEQR
Trigger: CCTTTGCTCAATTCCACACAAAGTGCTCCACACCAT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCAGAGAATGGAGGAATTaGAAGGTGATCCTGGGATCA +
Preference number: 5 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVREWRN*KVILGS
Trigger: TGATCCCAGGATCACCTTCAAATTCCTCCATTCTCT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTTGGGCGTGGAAGAAATaGGTTCAGGCTCAAAATACA +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCWAWKK*VQAQNT
Trigger: TGTATTTTGAGCCTGAACCAATTTCTTCCACGCCCA...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTTGGGCGTGGAAGAAATaGGTTCAGGCTCAAAATACA +
Preference number: 5 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCWAWKK*VQAQNT
Trigger: TGTATTTTGAGCCTGAACCAATTTCTTCCACGCCCA...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTAGAGAATGGAGGAATTaGAAGGTGATCCTGGGATCA +
Preference number: 5 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCREWRN*KVILGS
Trigger: TGATCCCAGGATCACCTTCAAATTCCTCCATTCTCT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTAGAGAATGGAGGAATTaGAAGGTGATCCTGGGATCA +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCREWRN*KVILGS
Trigger: TGATCCCAGGATCACCTTCAAATTCCTCCATTCTCT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCACCAAGTTGCATATTTaGCAGTGTCATCTAGACGTG +
Preference number: 5 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVTKLHI*QCHLDV
Trigger: CACGTCTAGATGACACTGCAAAATATGCAACTTGGT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTACCAAGTTGCATATTTaGCAGTGTCATCTAGACGTG +
Preference number: 5 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCTKLHI*QCHLDV
Trigger: CACGTCTAGATGACACTGCAAAATATGCAACTTGGT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTACCAAGTTGCATATTTaGCAGTGTCATCTAGACGTG +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCTKLHI*QCHLDV
Trigger: CACGTCTAGATGACACTGCAAAATATGCAACTTGGT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCACATGTAAACTGTGCTaGGGATATTGTGTTACCAAG +
Preference number: 5 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVTCKLC*GYCVTK
Trigger: CTTGGTAACACAATATCCCAAGCACAGTTTACATGT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp CATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTCAGCAGATGTCACAGTTaGTTTCCCTCTTATAGAAAT +
Preference number: 5 (lower is better)
Translates to: HVNCAWDIVLPSCIFCSVSRCHS*FPSYRN
Trigger: ATTTCTATAAGAGGGAAACAAACTGTGACATCTGCT...GACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTACTGTGCTTGGGATATaGTGTTACCAAGTTGCATAT +
Preference number: 5 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCTVLGI*CYQVAY
Trigger: ATATGCAACTTGGTAACACAATATCCCAAGCACAGT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTACTGTGCTTGGGATATaGTGTTACCAAGTTGCATAT +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCTVLGI*CYQVAY
Trigger: ATATGCAACTTGGTAACACAATATCCCAAGCACAGT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTACATGTAAACTGTGCTaGGGATATTGTGTTACCAAG +
Preference number: 5 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCTCKLC*GYCVTK
Trigger: CTTGGTAACACAATATCCCAAGCACAGTTTACATGT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTACATGTAAACTGTGCTaGGGATATTGTGTTACCAAG +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCTCKLC*GYCVTK
Trigger: CTTGGTAACACAATATCCCAAGCACAGTTTACATGT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp ACATGTAAACTGTGCTTGGGATATTGTGTTACCAAGTTGCATATTTTGCAGTGTAGCAGATGTCACAGTTaGTTTCCCTCTTATAGAAAT +
Preference number: 5 (lower is better)
Translates to: TCKLCLGYCVTKLHILQCSRCHS*FPSYRN
Trigger: ATTTCTATAAGAGGGAAACAAACTGTGACATCTGCT...ACACTGCAAAATATGCAACTTGGTAACACAATATCCCAAGCACAGTTTACATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS-3UTR CAA 90 bp TATTTTGCAGTGTCATCTAGACGTGGTAGAAAAATAGATATACCCATGCCATGTAGCAGATGTCACAGTTaGTTTCCCTCTTATAGAAAT +
Preference number: 5 (lower is better)
Translates to: YFAVSSRRGRKIDIPMPCSRCHS*FPSYRN
Trigger: ATTTCTATAAGAGGGAAACAAACTGTGACATCTGCT...ACATGGCATGGGTATATCTATTTTTCTACCACGTCTAGATGACACTGCAAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS GCA 72 bp CGGGGTCCGCGCAGGGACCGCCACAGCTCGGCTCAGTaGAGTCGGTGCGCTCTGCCCCCGTCCCAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: RGPRRDRHSSAQ*SRCALPPSQAH
Trigger: GTGAGCCTGGGACGGGGGCAGAGCGCACCGACTGCACTGAGCCGAGCTGTGGCGGTCCCTGCGCGGACCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528846.5
ENST00000614153.4
CDS CCA 72 bp GCAGTGTGCGTCCAGGAATCGCGCCGGGAAGTGCGCTaGGTGCGGCGGCCGAGGGTGACCGCGCGTTCAGCC +
Preference number: 6 (lower is better)
Translates to: AVCVQESRREVR*VRRPRVTARSA
Trigger: GGCTGAACGCGCGGTCACCCTCGGCCGCCGCACCCAGCGCACTTCCCGGCGCGATTCCTGGACGCACACTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS TCA 72 bp GGAGGTGGCCGCAGGAGTCCGGGGCGGCTCCGGCCCTaGCCACTACCCTGCAGTGTGCGTCCAGGAATCGCG +
Preference number: 6 (lower is better)
Translates to: GGGRRSPGRLRP*PLPCSVRPGIA
Trigger: CGCGATTCCTGGACGCACACTGCAGGGTAGTGGTCAGGGCCGGAGCCGCCCCGGACTCCTGCGGCCACCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS TCA 72 bp CTCCCTTTCTGGGGCAGGCGTTTCTCCGAGGCGCACTaGGGCTCCGGGGCGAGTCCGCGCAGCGCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LPFWGRRFSEAH*GSGASPRSASW
Trigger: CCAGCTCGCGCTGCGCGGACTCGCCCCGGAGCCTCAGTGCGCCTCGGAGAAACGCCTGCCCCAGAAAGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS GCA 72 bp CGGGGCGGCTCCGGCCCTGACCACTACCCTGCAGTGTaGGTCCAGGAATCGCGCCGGGAAGTGCGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: RGGSGPDHYPAV*VQESRREVRWV
Trigger: CACCCAGCGCACTTCCCGGCGCGATTCCTGGACGCACACTGCAGGGTAGTGGTCAGGGCCGGAGCCGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS CCA 72 bp CTGTTAGGCCAAGCCGAGCCGGGCGAGCTTTCAAGGTaGAGGTGGCCGCAGGAGTCCGGGGCGGCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: LLGQAEPGELSR*RWPQESGAAPA
Trigger: GGCCGGAGCCGCCCCGGACTCCTGCGGCCACCTCCACCTTGAAAGCTCGCCCGGCTCGGCTTGGCCTAACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398035.6
CDS CCA 72 bp GGTCTGGAAGCCAGCCCGGGAGCAAGCGGTGAGGTTTaGCCAGCCCCGTCCTGGGCCGGCGAGGTACCTGCC +
Preference number: 6 (lower is better)
Translates to: GLEASPGASGEV*PAPSWAGEVPA
Trigger: GGCAGGTACCTCGCCGGCCCAGGACGGGGCTGGCCAAACCTCACCGCTTGCTCCCGGGCTGGCTTCCAGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS TCA 72 bp TGCCCTTGGTCTGGAAGCCAGCCCGGGAGCAAGCGGTaGGGTTTGGCCAGCCCCGTCCTGGGCCGGCGAGGT +
Preference number: 6 (lower is better)
Translates to: CPWSGSQPGSKR*GLASPVLGRRG
Trigger: ACCTCGCCGGCCCAGGACGGGGCTGGCCAAACCTCACCGCTTGCTCCCGGGCTGGCTTCCAGACCAAGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS GCA 72 bp CGCAGGGACCGCCACAGCTCGGCTCAGTGCAGTCGGTaGGCTCTGCCCCCGTCCCAGGCTCACTGTGAGCCT +
Preference number: 6 (lower is better)
Translates to: RRDRHSSAQCSR*ALPPSQAHCEP
Trigger: AGGCTCACAGTGAGCCTGGGACGGGGGCAGAGCGCACCGACTGCACTGAGCCGAGCTGTGGCGGTCCCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528846.5
ENST00000614153.4
CDS GCA 72 bp GGTTTGGCCAGCCCCGTCCTGGGCCGGCGAGGTACCTaGCAGACTGACCTAGTAAAGGGGCCAGGCCCGAGG +
Preference number: 6 (lower is better)
Translates to: GLASPVLGRRGT*QTDLVKGPGPR
Trigger: CCTCGGGCCTGGCCCCTTTACTAGGTCAGTCTGGCAGGTACCTCGCCGGCCCAGGACGGGGCTGGCCAAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS GCA 72 bp CCAGGTGTGGCTTCTGGGCAGGCTCCGACCTCTGCGTaGCCTTGGTCTGGAAGCCAGCCCGGGAGCAAGCGG +
Preference number: 6 (lower is better)
Translates to: PGVASGQAPTSA*PWSGSQPGSKR
Trigger: CCGCTTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGCCTGCCCAGAAGCCACACCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS CAA 90 bp CTGGCCAGGTGTGGCTTCTGGGCAGGCTCCGACCTCTGCGTGCCCTaGGTCTGGAAGCCAGCCCGGGAGCAAGCGGTGAGGTTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LARCGFWAGSDLCVP*VWKPAREQAVRFGQ
Trigger: CTGGCCAAACCTCACCGCTTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGCCTGCCCAGAAGCCACACCTGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS TCA 72 bp CAGCCCCGTCCTGGGCCGGCGAGGTACCTGCCAGACTaGCCTAGTAAAGGGGCCAGGCCCGAGGAACTCCCT +
Preference number: 6 (lower is better)
Translates to: QPRPGPARYLPD*PSKGARPEELP
Trigger: AGGGAGTTCCTCGGGCCTGGCCCCTTTACTAGGTCAGTCTGGCAGGTACCTCGCCGGCCCAGGACGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS GCA 72 bp GCCTCCGGACCGGGTTCCCCCGGAGGCCGCCTGGTGTaGCCGTCTTTGCTGCAGCAGCTCCTTCACTGTGAT +
Preference number: 6 (lower is better)
Translates to: ASGPGSPGGRLV*PSLLQQLLHCD
Trigger: ATCACAGTGAAGGAGCTGCTGCAGCAAAGACGGGCACACCAGGCGGCCTCCGGGGGAACCCGGTCCGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000528846.5
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS GCA 72 bp CTGGCCAGGTGTGGCTTCTGGGCAGGCTCCGACCTCTaGGTGCCCTTGGTCTGGAAGCCAGCCCGGGAGCAA +
Preference number: 6 (lower is better)
Translates to: LARCGFWAGSDL*VPLVWKPAREQ
Trigger: TTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGCCTGCCCAGAAGCCACACCTGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS CAA 72 bp TGTGGCTTCTGGGCAGGCTCCGACCTCTGCGTGCCCTaGGTCTGGAAGCCAGCCCGGGAGCAAGCGGTGAGG +
Preference number: 6 (lower is better)
Translates to: CGFWAGSDLCVP*VWKPAREQAVR
Trigger: CCTCACCGCTTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGCCTGCCCAGAAGCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS CCA 72 bp TTCTGGGCAGGCTCCGACCTCTGCGTGCCCTTGGTCTaGAAGCCAGCCCGGGAGCAAGCGGTGAGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: FWAGSDLCVPLV*KPAREQAVRFG
Trigger: GCCAAACCTCACCGCTTGCTCCCGGGCTGGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGCCTGCCCAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS GCA 72 bp CGGGTTCCCCCGGAGGCCGCCTGGTGTGCCCGTCTTTaGTGCAGCAGCTCCTTCACTGTGATCTTCACTCGG +
Preference number: 6 (lower is better)
Translates to: RVPPEAAWCARL*CSSSFTVIFTR
Trigger: CCGAGTGAAGATCACAGTGAAGGAGCTGCTGCAGCAAAGACGGGCACACCAGGCGGCCTCCGGGGGAACCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000528846.5
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS GCA 72 bp AAGATGGTGCAACTGGGTCTGAAAGGTGGACACTGCTaGCTCCGGACCGGGTTCCCCCGGAGGCCGCCTGGT +
Preference number: 6 (lower is better)
Translates to: KMVQLGLKGGHC*LRTGFPRRPPG
Trigger: ACCAGGCGGCCTCCGGGGGAACCCGGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTTGCACCATCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000528846.5
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS GCA 72 bp CAGAAGATGGTGCAACTGGGTCTGAAAGGTGGACACTaGTGCCTCCGGACCGGGTTCCCCCGGAGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: QKMVQLGLKGGH*CLRTGFPRRPP
Trigger: AGGCGGCCTCCGGGGGAACCCGGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTTGCACCATCTTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000528846.5
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS CCA 72 bp AGTCCTGCAGAAGATGGTGCAACTGGGTCTGAAAGGTaGACACTGCTGCCTCCGGACCGGGTTCCCCCGGAG +
Preference number: 6 (lower is better)
Translates to: SPAEDGATGSER*TLLPPDRVPPE
Trigger: CTCCGGGGGAACCCGGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTTGCACCATCTTCTGCAGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000528846.5
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS CCA 72 bp GATACACCTTCGGTTTTTCTGGCCAGGTGTGGCTTCTaGGCAGGCTCCGACCTCTGCGTGCCCTTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: DTPSVFLARCGF*AGSDLCVPLVW
Trigger: CCAGACCAAGGGCACGCAGAGGTCGGAGCCTGCCCAGAAGCCACACCTGGCCAGAAAAACCGAAGGTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS TCA 72 bp AAAATACAGTCCTGCAGAAGATGGTGCAACTGGGTCTaGAAGGTGGACACTGCTGCCTCCGGACCGGGTTCC +
Preference number: 6 (lower is better)
Translates to: KIQSCRRWCNWV*KVDTAASGPGS
Trigger: GGAACCCGGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTTGCACCATCTTCTGCAGGACTGTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000528846.5
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1
CDS TCA 72 bp AGCAGCTCCTTCACTGTGATCTTCACTCGGACACCTTaGTACACCTTCGGTTTTTCGCAGCCCCACCACCCC +
Preference number: 6 (lower is better)
Translates to: SSSFTVIFTRTP*YTFGFSQPHHP
Trigger: GGGGTGGTGGGGCTGCGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528846.5
ENST00000614153.4
CDS CAA 72 bp CAGCAGCTCCTTCACTGTGATCTTCACTCGGACACCTaGATACACCTTCGGTTTTTCGCAGCCCCACCACCC +
Preference number: 6 (lower is better)
Translates to: QQLLHCDLHSDT*IHLRFFAAPPP
Trigger: GGGTGGTGGGGCTGCGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528846.5
ENST00000614153.4
CDS CAA 72 bp CAGCAGCTCCTTCACTGTGATCTTCACTCGGACACCTaGATACACCTTCGGTTTTTCTGGCCAGGTGTGGCT +
Preference number: 6 (lower is better)
Translates to: QQLLHCDLHSDT*IHLRFFWPGVA
Trigger: AGCCACACCTGGCCAGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS TCA 72 bp AGCAGCTCCTTCACTGTGATCTTCACTCGGACACCTTaGTACACCTTCGGTTTTTCTGGCCAGGTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: SSSFTVIFTRTP*YTFGFSGQVWL
Trigger: AAGCCACACCTGGCCAGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526216.1
ENST00000639470.1
CDS TCA 72 bp AGCAGCTCCTTCACTGTGATCTTCACTCGGACACCTTaGTACACCTTCGGTTTTTCCGACATCGTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: SSSFTVIFTRTP*YTFGFSDIVVS
Trigger: GCTGACCACGATGTCGGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610738.5
CDS CAA 72 bp CAGCAGCTCCTTCACTGTGATCTTCACTCGGACACCTaGATACACCTTCGGTTTTTCCGACATCGTGGTCAG +
Preference number: 6 (lower is better)
Translates to: QQLLHCDLHSDT*IHLRFFRHRGQ
Trigger: CTGACCACGATGTCGGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610738.5
CDS TCA 72 bp AGCAGCTCCTTCACTGTGATCTTCACTCGGACACCTTaGTACACCTTCGGTTTTTCTAGTAAAGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSSFTVIFTRTP*YTFGFSSKGAR
Trigger: CCTGGCCCCTTTACTAGAAAAACCGAAGGTGTATCAAGGTGTCCGAGTGAAGATCACAGTGAAGGAGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638573.1
CDS CAA 72 bp ATTCTCCCCGTTGCAAATAATTGGGCGTGGAAGAAATaGGTTCAGGCTCAAAATACAGTCCTGCAGAAGATG +
Preference number: 6 (lower is better)
Translates to: ILPVANNWAWKK*VQAQNTVLQKM
Trigger: CATCTTCTGCAGGACTGTATTTTGAGCCTGAACCAATTTCTTCCACGCCCAATTATTTGCAACGGGGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398035.6
ENST00000526216.1
ENST00000528846.5
ENST00000610738.5
ENST00000614153.4
ENST00000638573.1
ENST00000639470.1