Pregenerated sensors for COLCA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000196167Ensembl transcript IDs: ENST00000355430.4, ENST00000526150.1, ENST00000532918.4, ENST00000540738.3, ENST00000620864.1, ENST00000669257.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCCCGCTGCCCGCGGAGTCCGGAGCCGATCGGGGAACGGGGTGGTaGGGCTGCGGTAGGCTGGAGCGCGGAGAGGGCGCGGCGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: RPLPAESGADRGTGW*GCGRLERGEGAAPG Trigger: CCCAGGCGCCGCGCCCTCTCCGCGCTCCAGCCTACCGCAGCCCCACCACCCCGTTCCCCGATCGGCTCCGGACTCCGCGGGCAGCGGGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540738.3 |
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| CDS CCA 90 bp | AGAGGGCGCGGCGCCTGGGCCCTGCGGGCGGGGCACGGGATTCCCTaGGTCCGGGCTAGGAAGAGCGCAATCTCCTTTCCTGGGGAGACC | + |
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Preference number: 5 (lower is better) Translates to: RGRGAWALRAGHGIP*VRARKSAISFPGET Trigger: GGTCTCCCCAGGAAAGGAGATTGCGCTCTTCCTAGCCCGGACCCAGGGAATCCCGTGCCCCGCCCGCAGGGCCCAGGCGCCGCGCCCTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540738.3 |
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| CDS GCA 90 bp | GAGGGAAGCCCGCTGGTAGCCAGGCGGAGCCAGAAAAATAGGAGGTaGAGAGCGAAGGCCTCTGCTAGGCCGCTGGCCTGCCACCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: EGSPLVARRSQKNRR*RAKASARPLACHLG Trigger: GCCCAGGTGGCAGGCCAGCGGCCTAGCAGAGGCCTTCGCTCTGCACCTCCTATTTTTCTGGCTCCGCCTGGCTACCAGCGGGCTTCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 90 bp | GCCAGAAAAATAGGAGGTGCAGAGCGAAGGCCTCTGCTAGGCCGCTaGCCTGCCACCTGGGCCCAGAGCGACTTCTTGCTGTGCCACACC | + |
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Preference number: 5 (lower is better) Translates to: ARKIGGAERRPLLGR*PATWAQSDFLLCHT Trigger: GGTGTGGCACAGCAAGAAGTCGCTCTGGGCCCAGGTGGCAGGCCAGCGGCCTAGCAGAGGCCTTCGCTCTGCACCTCCTATTTTTCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 90 bp | AAAAATAGGAGGTGCAGAGCGAAGGCCTCTGCTAGGCCGCTGGCCTaGCACCTGGGCCCAGAGCGACTTCTTGCTGTGCCACACCCACTA | + |
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Preference number: 5 (lower is better) Translates to: KNRRCRAKASARPLA*HLGPERLLAVPHPL Trigger: TAGTGGGTGTGGCACAGCAAGAAGTCGCTCTGGGCCCAGGTGGCAGGCCAGCGGCCTAGCAGAGGCCTTCGCTCTGCACCTCCTATTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 90 bp | CTCTCTTCTCTTGCTGTCCCCTTCTGTGGAGGGGGCGGGTGGCTATaGGAGGACTTGGCCTGGCACTCTCTCCCTCTGTGGACCATTCCT | + |
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Preference number: 5 (lower is better) Translates to: LSSLAVPFCGGGGWL*EDLAWHSLPLWTIP Trigger: AGGAATGGTCCACAGAGGGAGAGAGTGCCAGGCCAAGTCCTCTCATAGCCACCCGCCCCCTCCACAGAAGGGGACAGCAAGAGAAGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 90 bp | GGGTGTGTTTCCACGGCTTTTCCCTCTCTCTCGGCTGTCTGGGTCTaGAAGCCAAGGTTCCCCCGACCTAATCAGAGTGGTGGGCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: GCVSTAFPSLSAVWV*KPRFPRPNQSGGLR Trigger: GCGGAGCCCACCACTCTGATTAGGTCGGGGGAACCTTGGCTTTCAGACCCAGACAGCCGAGAGAGAGGGAAAAGCCGTGGAAACACACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000532918.4 |
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| CDS CCA 90 bp | CAAAACACAGATGGGGGATGCGGGAATCAGTCTGGCCAGCCAGTCTaGCTCCGGTGTTCATGGCCAGGGCAGCCTAAGTCACTCATGGCT | + |
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Preference number: 5 (lower is better) Translates to: QNTDGGCGNQSGQPV*LRCSWPGQPKSLMA Trigger: AGCCATGAGTGACTTAGGCTGCCCTGGCCATGAACACCGGAGCCAGACTGGCTGGCCAGACTGATTCCCGCATCCCCCATCTGTGTTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 90 bp | AAAGTGGTTCTCCAGCTAAAGAGACTCATGGGGAGGACTCATGAGTaGCTCACCTCTGTGTCCCAGCACCTGGCTCGAGGCCCAGAACAC | + |
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Preference number: 5 (lower is better) Translates to: KVVLQLKRLMGRTHE*LTSVSQHLARGPEH Trigger: GTGTTCTGGGCCTCGAGCCAGGTGCTGGGACACAGAGGTGAGCCACTCATGAGTCCTCCCCATGAGTCTCTTTAGCTGGAGAACCACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS GCA 90 bp | TTGACAGCGGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTTaGACCATCTTCTGCAGGTCAGTACAGCCAGCATTAACAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LTAVRRQQCPPFRPS*TIFCRSVQPALTVP Trigger: GGGAACTGTTAATGCTGGCTGTACTGACCTGCAGAAGATGGTGCAACTGGGTCTGAAAGGTGGACACTGCTGCCTCCGGACCGCTGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 90 bp | CAGCCAATGCTGTGGGTACCTGGGGTCTCAGGGTTGCTCTGGGCCTaGTCATCCACTCAGATCTGTAAGGAGGATTTGCAGGATCCATTT | + |
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Preference number: 5 (lower is better) Translates to: QPMLWVPGVSGLLWA*SSTQICKEDLQDPF Trigger: AAATGGATCCTGCAAATCCTCCTTACAGATCTGAGTGGATGATCAGGCCCAGAGCAACCCTGAGACCCCAGGTACCCACAGCATTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 90 bp | CCTATGAAGAACAGCCAATGCTGTGGGTACCTGGGGTCTCAGGGTTaGTCTGGGCCTGATCATCCACTCAGATCTGTAAGGAGGATTTGC | + |
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Preference number: 5 (lower is better) Translates to: PMKNSQCCGYLGSQG*SGPDHPLRSVRRIC Trigger: GCAAATCCTCCTTACAGATCTGAGTGGATGATCAGGCCCAGAGCAACCCTGAGACCCCAGGTACCCACAGCATTGGCTGTTCTTCATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 90 bp | GTCTTAGCTTTCCCTTCAGAGCATTTCTTTCAGCCTGCTTCACGGTaGTATTCTTGCTTTGACAGCGGTCCGGAGGCAGCAGTGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: VLAFPSEHFFQPASR*YSCFDSGPEAAVST Trigger: GGTGGACACTGCTGCCTCCGGACCGCTGTCAAAGCAAGAATATCACCGTGAAGCAGGCTGAAAGAAATGCTCTGAAGGGAAAGCTAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 90 bp | GTCTCCTATGAAGTCTTCTCTGAGTCTCCTATGAAGAACAGCCAATaGTGTGGGTACCTGGGGTCTCAGGGTTGCTCTGGGCCTGATCAT | + |
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Preference number: 5 (lower is better) Translates to: VSYEVFSESPMKNSQ*CGYLGSQGCSGPDH Trigger: ATGATCAGGCCCAGAGCAACCCTGAGACCCCAGGTACCCACAGCATTGGCTGTTCTTCATAGGAGACTCAGAGAAGACTTCATAGGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 90 bp | CCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACTTaGACACAGAGTGGGGAACATCACACACCGGGACCTGTCATGGGG | + |
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Preference number: 5 (lower is better) Translates to: PHVLTHRWELNNENT*TQSGEHHTPGPVMG Trigger: CCCCATGACAGGTCCCGGTGTGTGATGTTCCCCACTCTGTGTCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS TCA 90 bp | TTCAGAGCATTTCTTTCAGCCTGCTTCACGGTGATATTCTTGCTTTaGCAGCGGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: FRAFLSACFTVIFLL*QRSGGSSVHLSDPV Trigger: AACTGGGTCTGAAAGGTGGACACTGCTGCCTCCGGACCGCTGTCAAAGCAAGAATATCACCGTGAAGCAGGCTGAAAGAAATGCTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 90 bp | GAGCCAGAGGCTGGACAGACACAAGCAGAGATTTTGGAAAAAGACTaGGTCCCTCTCAGCACTTCAAAGATCCCTTCCAACACCCAAACA | + |
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Preference number: 5 (lower is better) Translates to: EPEAGQTQAEILEKD*VPLSTSKIPSNTQT Trigger: TGTTTGGGTGTTGGAAGGGATCTTTGAAGTGCTGAGAGGGACTCAGTCTTTTTCCAAAATCTCTGCTTGTGTCTGTCCAGCCTCTGGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 90 bp | GGTTGCTCTGGGCCTGATCATCCACTCAGATCTGTAAGGAGGATTTaGAGGATCCATTTAGAAAGATCCTCCCTTACTTCCACAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: GCSGPDHPLRSVRRI*RIHLERSSLTSTSM Trigger: CATGCTTGTGGAAGTAAGGGAGGATCTTTCTAAATGGATCCTGCAAATCCTCCTTACAGATCTGAGTGGATGATCAGGCCCAGAGCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 90 bp | GTAAACAATAATGAGTCTCCTATGAAGTCTTCTCTGAGTCTCCTATaGAGAACAGCCAATGCTGTGGGTACCTGGGGTCTCAGGGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: VNNNESPMKSSLSLL*RTANAVGTWGLRVA Trigger: AGCAACCCTGAGACCCCAGGTACCCACAGCATTGGCTGTTCTTCATAGGAGACTCAGAGAAGACTTCATAGGAGACTCATTATTGTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 90 bp | GACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAACACCATTTaGCCCAGCCATCCCATTACTGGGTATATACCCAAGGATTATAAA | + |
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Preference number: 5 (lower is better) Translates to: DSVAIPQGSRTRNTI*PSHPITGYIPKDYK Trigger: TTTATAATCCTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTGTTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS CCA 90 bp | GAAGAACTAAAGAAACTGGATGAGGAGTCTCAAAAGGAGAAGGCTTaGGGTGAAGATGGGATGGGCATAACTTCTTCAGAGTTAGTACTG | + |
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Preference number: 5 (lower is better) Translates to: EELKKLDEESQKEKA*GEDGMGITSSELVL Trigger: CAGTACTAACTCTGAAGAAGTTATGCCCATCCCATCTTCACCCCAAGCCTTCTCCTTTTGAGACTCCTCATCCAGTTTCTTTAGTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 90 bp | AGAATAAACAGCAGAGGCCTAAAACCATGGACTGGTCTTGAATCCTaGAAATATCTTGGTTATTTGCAAAAGGAACCTCACCATGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: RINSRGLKPWTGLES*KYLGYLQKEPHHAS Trigger: AGAGGCATGGTGAGGTTCCTTTTGCAAATAACCAAGATATTTCCAGGATTCAAGACCAGTCCATGGTTTTAGGCCTCTGCTGTTTATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 90 bp | ATTACACTGTTCATCTCACACACCATAGACTCTAGAGAGGTTAAGTaGAAAATCACACACTCTAGACAAAGTGGTTCTCCAGCTAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: ITLFISHTIDSREVK*KITHSRQSGSPAKE Trigger: CTCTTTAGCTGGAGAACCACTTTGTCTAGAGTGTGTGATTTTGCACTTAACCTCTCTAGAGTCTATGGTGTGTGAGATGAACAGTGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS TCA 90 bp | CTGTTTCCTCACCTGTGGAATGTGAATGCTATACAATATAGCACCTaGTGTCCAGTAAACAATAATGAGTCTCCTATGAAGTCTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LFPHLWNVNAIQYST*CPVNNNESPMKSSL Trigger: CAGAGAAGACTTCATAGGAGACTCATTATTGTTTACTGGACATCAGGTGCTATATTGTATAGCATTCACATTCCACAGGTGAGGAAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 90 bp | CCAACCACACACCAAAATTATACTCTTTACTTAAGGCTCCATCACTaGGTTCTGTCTACAGTATCCTCTCTATGCAAAACAATATTACAC | + |
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Preference number: 5 (lower is better) Translates to: PTTHQNYTLYLRLHH*VLSTVSSLCKTILH Trigger: GTGTAATATTGTTTTGCATAGAGAGGATACTGTAGACAGAACCCAGTGATGGAGCCTTAAGTAAAGAGTATAATTTTGGTGTGTGGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS CCA 72 bp | CCCGCGGAGTCCGGAGCCGATCGGGGAACGGGGTGGTaGGGCTGCGGTAGGCTGGAGCGCGGAGAGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: PAESGADRGTGW*GCGRLERGEGA Trigger: CGCGCCCTCTCCGCGCTCCAGCCTACCGCAGCCCCACCACCCCGTTCCCCGATCGGCTCCGGACTCCGCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540738.3 |
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| CDS GCA 72 bp | CAGCTCGCGCTGCGCGGACTCGCCCCGGAGCCTCAGTaGGCCTCGGAGAAACGCCTGCCCCAGAAAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QLALRGLAPEPQ*ASEKRLPQKGR Trigger: CCTCCCTTTCTGGGGCAGGCGTTTCTCCGAGGCGCACTGAGGCTCCGGGGCGAGTCCGCGCAGCGCGAGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355430.4 |
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| CDS GCA 72 bp | TCCCTGCCCCAGGAGCCCTCCCAGGCGCTGAGTCCCTaGTGCTGCAGCATCCAGCCACCGACCCAGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SLPQEPSQALSP*CCSIQPPTQLL Trigger: CAGGAGCTGGGTCGGTGGCTGGATGCTGCAGCAGCAGGGACTCAGCGCCTGGGAGGGCTCCTGGGGCAGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000355430.4 ENST00000526150.1 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 72 bp | GGCGCCTGGGCCCTGCGGGCGGGGCACGGGATTCCCTaGGTCCGGGCTAGGAAGAGCGCAATCTCCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GAWALRAGHGIP*VRARKSAISFP Trigger: AGGAAAGGAGATTGCGCTCTTCCTAGCCCGGACCCAGGGAATCCCGTGCCCCGCCCGCAGGGCCCAGGCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540738.3 |
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| CDS TCA 72 bp | GCAGAAACCCCAGTGTCGGGCCCAGGAAGAGCGGGATaGAAGGGGGAGGGAAGCCCGCTGGTAGCCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: AETPVSGPGRAG*KGEGSPLVARR Trigger: CCGCCTGGCTACCAGCGGGCTTCCCTCCCCCTTTCATCCCGCTCTTCCTGGGCCCGACACTGGGGTTTCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 72 bp | AGGTGCAGAGCGAAGGCCTCTGCTAGGCCGCTGGCCTaGCACCTGGGCCCAGAGCGACTTCTTGCTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RCRAKASARPLA*HLGPERLLAVP Trigger: TGGCACAGCAAGAAGTCGCTCTGGGCCCAGGTGGCAGGCCAGCGGCCTAGCAGAGGCCTTCGCTCTGCACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 72 bp | ACCCTAACTCCTGGAACCCGGCTTGAGGGGGATCCCTaGTGTCCAGCTGCGGTCCCCGCAGTGACCAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: TLTPGTRLEGDP*CPAAVPAVTRR Trigger: TCGCCTGGTCACTGCGGGGACCGCAGCTGGACAGCAGGGATCCCCCTCAAGCCGGGTTCCAGGAGTTAGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540738.3 |
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| CDS CCA 72 bp | GGTGTGTTTCCACGGCTTTTCCGCTTGCTCCCGGGCTaGCTTCCAGACCAAGGGCACGCAGAGGTCGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GVFPRLFRLLPG*LPDQGHAEVGA Trigger: GGCTCCGACCTCTGCGTGCCCTTGGTCTGGAAGCCAGCCCGGGAGCAAGCGGAAAAGCCGTGGAAACACACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526150.1 |
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| CDS CCA 72 bp | CCCTCAAAACACAGATGGGGGATGCGGGAATCAGTCTaGCCAGCCAGTCTGGCTCCGGTGTTCATGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSKHRWGMRESV*PASLAPVFMAR Trigger: CCTGGCCATGAACACCGGAGCCAGACTGGCTGGCCAGACTGATTCCCGCATCCCCCATCTGTGTTTTGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 72 bp | CTCCAGCTAAAGAGACTCATGGGGAGGACTCATGAGTaGCTCACCTCTGTGTCCCAGCACCTGGCTCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LQLKRLMGRTHE*LTSVSQHLARG Trigger: GCCTCGAGCCAGGTGCTGGGACACAGAGGTGAGCCACTCATGAGTCCTCCCCATGAGTCTCTTTAGCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS TCA 72 bp | TGGGGAGGAGGAAAGGGTCTTAATGGGCAGTCATTCTaGGCAGAAACCCCAGTGTCGGGCCCAGGAAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: WGGGKGLNGQSF*AETPVSGPGRA Trigger: CGCTCTTCCTGGGCCCGACACTGGGGTTTCTGCTCAGAATGACTGCCCATTAAGACCCTTTCCTCCTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | CACTCAGTGCTCCTGCCATCCCTGTCCATCTCCACATaGAAGGAGAGGTTAGCACTCCAGCCTGGGCGACTG | + |
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Preference number: 6 (lower is better) Translates to: HSVLLPSLSIST*KERLALQPGRL Trigger: CAGTCGCCCAGGCTGGAGTGCTAACCTCTCCTTTCATGTGGAGATGGACAGGGATGGCAGGAGCACTGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | GGTTCTCCAGCTAAAGAGACTCATGGGGAGGACTCATaGGTGGCTCACCTCTGTGTCCCAGCACCTGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: GSPAKETHGEDS*VAHLCVPAPGS Trigger: CGAGCCAGGTGCTGGGACACAGAGGTGAGCCACTCATGAGTCCTCCCCATGAGTCTCTTTAGCTGGAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS GCA 72 bp | GCTGTCAGATTTCAATACATCCATCCTGCCCTCCACTaGCAGGTGCCACCTCAGGTGTTCCCAGGCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: AVRFQYIHPALH*QVPPQVFPGLL Trigger: GAGCAGGCCTGGGAACACCTGAGGTGGCACCTGGCAGTGGAGGGCAGGATGGATGTATTGAAATCTGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 72 bp | CTCCAGAGGATGAGGCTCCTGGCATCCCCAGCTCTGTaGGGAGGAGGAAAGGGTCTTAATGGGCAGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: LQRMRLLASPAL*GGGKGLNGQSF Trigger: GAATGACTGCCCATTAAGACCCTTTCCTCCTCCCCACAGAGCTGGGGATGCCAGGAGCCTCATCCTCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | TCCACGGCTTTTCCCTCTCTCTCGGCTGTCTGGGTCTaGAAGCCAAGGTTCCCCCGACCTAATCAGAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: STAFPSLSAVWV*KPRFPRPNQSG Trigger: ACCACTCTGATTAGGTCGGGGGAACCTTGGCTTTCAGACCCAGACAGCCGAGAGAGAGGGAAAAGCCGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000532918.4 |
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| CDS CAA 72 bp | GGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTaGCACCATCTTCTGCAGGTCAGTACAGCCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: GPEAAVSTFQTQ*HHLLQVSTASI Trigger: AATGCTGGCTGTACTGACCTGCAGAAGATGGTGCAACTGGGTCTGAAAGGTGGACACTGCTGCCTCCGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | CTGTGGGTACCTGGGGTCTCAGGGTTGCTCTGGGCCTaGTCATCCACTCAGATCTGTAAGGAGGATTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LWVPGVSGLLWA*SSTQICKEDLQ Trigger: CTGCAAATCCTCCTTACAGATCTGAGTGGATGATCAGGCCCAGAGCAACCCTGAGACCCCAGGTACCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 72 bp | AACAGCCAATGCTGTGGGTACCTGGGGTCTCAGGGTTaGTCTGGGCCTGATCATCCACTCAGATCTGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: NSQCCGYLGSQG*SGPDHPLRSVR Trigger: CCTTACAGATCTGAGTGGATGATCAGGCCCAGAGCAACCCTGAGACCCCAGGTACCCACAGCATTGGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 72 bp | GTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTTaGACCATCTTCTGCAGGTCAGTACAGCCAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: VRRQQCPPFRPS*TIFCRSVQPAL Trigger: TAATGCTGGCTGTACTGACCTGCAGAAGATGGTGCAACTGGGTCTGAAAGGTGGACACTGCTGCCTCCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS CAA 90 bp | TTTGACAGCGGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGTaGCACCATCTTCTGCAGGTCAGTACAGCCAGCATTAACAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FDSGPEAAVSTFQTQ*HHLLQVSTASINSS Trigger: GGAACTGTTAATGCTGGCTGTACTGACCTGCAGAAGATGGTGCAACTGGGTCTGAAAGGTGGACACTGCTGCCTCCGGACCGCTGTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | GCGAAAAAGCAAAGAGGGCACTTCGCAGTGCGGTGGTaGAACCCAGAGTCAGAAAGTCTCCAGAGGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: AKKQRGHFAVRW*NPESESLQRMR Trigger: CCTCATCCTCTGGAGACTTTCTGACTCTGGGTTTCACCACCGCACTGCGAAGTGCCCTCTTTGCTTTTTCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 72 bp | GAAGTCTTCTCTGAGTCTCCTATGAAGAACAGCCAATaGTGTGGGTACCTGGGGTCTCAGGGTTGCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: EVFSESPMKNSQ*CGYLGSQGCSG Trigger: CCCAGAGCAACCCTGAGACCCCAGGTACCCACAGCATTGGCTGTTCTTCATAGGAGACTCAGAGAAGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 72 bp | CCCAGAGCGACTTCTTGCTGTGCCACACCCACTAGCTaGCATGTTCATTCCTCAAAACCTGAGATTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PRATSCCATPTS*HVHSSKPEISP Trigger: AGGGGAAATCTCAGGTTTTGAGGAATGAACATGGCAGCTAGTGGGTGTGGCACAGCAAGAAGTCGCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 72 bp | AGGCCTGCTCCTCTCCCCCAGAGATGTGGCTTCAGCTaGCAAGCAATTCCTATCAGTCTTGTCATTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: RPAPLPQRCGFS*QAIPISLVILS Trigger: ACTGAGAATGACAAGACTGATAGGAATTGCTTGGCAGCTGAAGCCACATCTCTGGGGGAGAGGAGCAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CAA 90 bp | CTTCAGAGCATTTCTTTCAGCCTGCTTCACGGTGATATTCTTGCTTaGACAGCGGTCCGGAGGCAGCAGTGTCCACCTTTCAGACCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LQSISFSLLHGDILA*TAVRRQQCPPFRPS Trigger: ACTGGGTCTGAAAGGTGGACACTGCTGCCTCCGGACCGCTGTCAAAGCAAGAATATCACCGTGAAGCAGGCTGAAAGAAATGCTCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | TTTCTTTCAGCCTGCTTCACGGTGATATTCTTGCTTTaGCAGCGGTCCGGAGGCAGCAGTGTCCACCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: FLSACFTVIFLL*QRSGGSSVHLS Trigger: TGAAAGGTGGACACTGCTGCCTCCGGACCGCTGTCAAAGCAAGAATATCACCGTGAAGCAGGCTGAAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | TTCCCTTCAGAGCATTTCTTTCAGCCTGCTTCACGGTaGTATTCTTGCTTTGACAGCGGTCCGGAGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FPSEHFFQPASR*YSCFDSGPEAA Trigger: TGCTGCCTCCGGACCGCTGTCAAAGCAAGAATATCACCGTGAAGCAGGCTGAAAGAAATGCTCTGAAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS CAA 72 bp | ATTTCTTTCAGCCTGCTTCACGGTGATATTCTTGCTTaGACAGCGGTCCGGAGGCAGCAGTGTCCACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ISFSLLHGDILA*TAVRRQQCPPF Trigger: GAAAGGTGGACACTGCTGCCTCCGGACCGCTGTCAAAGCAAGAATATCACCGTGAAGCAGGCTGAAAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000620864.1 ENST00000669257.1 |
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| CDS CAA 90 bp | TCCCCCAGAGATGTGGCTTCAGCTGCCAAGCAATTCCTATCAGTCTaGTCATTCTCAGTTGCCCTTTCCCTAAGCTCTGTGTGTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SPRDVASAAKQFLSV*SFSVALSLSSVCFP Trigger: AGGGAAACACACAGAGCTTAGGGAAAGGGCAACTGAGAATGACAAGACTGATAGGAATTGCTTGGCAGCTGAAGCCACATCTCTGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 72 bp | ATCTTCAATGGTGTTGTCAAGAGCACTCAGTGCTCCTaGCATCCCTGTCCATCTCCACATGAAAGGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: IFNGVVKSTQCS*HPCPSPHERRG Trigger: ACCTCTCCTTTCATGTGGAGATGGACAGGGATGGCAGGAGCACTGAGTGCTCTTGACAACACCATTGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 72 bp | GTGGACCATTCCTGTCTCCTCACCTTCCAAATCACATaGAAGAGGCACAGTAAGTACTCACAGAAGATGACC | + |
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Preference number: 6 (lower is better) Translates to: VDHSCLLTFQIT*KRHSKYSQKMT Trigger: GGTCATCTTCTGTGAGTACTTACTGTGCCTCTTCCATGTGATTTGGAAGGTGAGGAGACAGGAATGGTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | GCTGGACAGACACAAGCAGAGATTTTGGAAAAAGACTaGGTCCCTCTCAGCACTTCAAAGATCCCTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: AGQTQAEILEKD*VPLSTSKIPSN Trigger: GTTGGAAGGGATCTTTGAAGTGCTGAGAGGGACTCAGTCTTTTTCCAAAATCTCTGCTTGTGTCTGTCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | ACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTaGACAATGAGAACACTTGGACACAGAGTGGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: TKHRMFSLIGGN*TMRTLGHRVGN Trigger: GTTCCCCACTCTGTGTCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS TCA 72 bp | GCGATTCCTCAGGGATCTAGAACTAGAAACACCATTTaGCCCAGCCATCCCATTACTGGGTATATACCCAAG | + |
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Preference number: 6 (lower is better) Translates to: AIPQGSRTRNTI*PSHPITGYIPK Trigger: CTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTGTTTCTAGTTCTAGATCCCTGAGGAATCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS GCA 72 bp | GGGCCTGATCATCCACTCAGATCTGTAAGGAGGATTTaGAGGATCCATTTAGAAAGATCCTCCCTTACTTCC | + |
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Preference number: 6 (lower is better) Translates to: GPDHPLRSVRRI*RIHLERSSLTS Trigger: GGAAGTAAGGGAGGATCTTTCTAAATGGATCCTGCAAATCCTCCTTACAGATCTGAGTGGATGATCAGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CAA 90 bp | TTCAAAGATCCCTTCCAACACCCAAACATCAAAAGCCATGTTATATaGCCAAGCAAGGGTGCCTATGAACGCCTGTTGAAACCCCACAAC | + |
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Preference number: 6 (lower is better) Translates to: FKDPFQHPNIKSHVI*PSKGAYERLLKPHN Trigger: GTTGTGGGGTTTCAACAGGCGTTCATAGGCACCCTTGCTTGGCAATATAACATGGCTTTTGATGTTTGGGTGTTGGAAGGGATCTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | CACCACCATTTAATTGGAATCCAACCAATCAGAAGGTaGAAAAGGCATAGTCACTCCACATGCAAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: HHHLIGIQPIRR*KRHSHSTCKPS Trigger: GCTGGGCTTGCATGTGGAGTGACTATGCCTTTTTCACCTTCTGATTGGTTGGATTCCAATTAAATGGTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669257.1 |
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| CDS CAA 72 bp | AACCAAACACCGCATGTTCTCACTCATAGGTGGGAATaGAACAATGAGAACACTTGGACACAGAGTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: NQTPHVLTHRWE*NNENTWTQSGE Trigger: TTCCCCACTCTGTGTCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS TCA 72 bp | GCAATGCCCCCAGCAAGAAGAAAAGAGTTCTCAGTCTaGGAGGCACAAACTGTAATCAGTGTAATTAACAGC | + |
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Preference number: 6 (lower is better) Translates to: AMPPARRKEFSV*EAQTVISVINS Trigger: GCTGTTAATTACACTGATTACAGTTTGTGCCTCTCAGACTGAGAACTCTTTTCTTCTTGCTGGGGGCATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 72 bp | GACTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTaGCGATTCCTCAGGGATCTAGAACTAGAAACACCA | + |
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Preference number: 6 (lower is better) Translates to: DCKLVQPLWKTV*RFLRDLELETP Trigger: TGGTGTTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS TCA 72 bp | AAAAGCCAGGGCTTTGGAGTTAGGCCTAACAAAGTCTaGATCCTAATTCTGCTACTGATATACTCAGTGATC | + |
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Preference number: 6 (lower is better) Translates to: KSQGFGVRPNKV*ILILLLIYSVI Trigger: GATCACTGAGTATATCAGTAGCAGAATTAGGATTCAGACTTTGTTAGGCCTAACTCCAAAGCCCTGGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS GCA 72 bp | TTCATCTCACACACCATAGACTCTAGAGAGGTTAAGTaGAAAATCACACACTCTAGACAAAGTGGTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FISHTIDSREVK*KITHSRQSGSP Trigger: TGGAGAACCACTTTGTCTAGAGTGTGTGATTTTGCACTTAACCTCTCTAGAGTCTATGGTGTGTGAGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS TCA 72 bp | AATAAACAGCAGAGGCCTAAAACCATGGACTGGTCTTaGATCCTGGAAATATCTTGGTTATTTGCAAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: NKQQRPKTMDWS*ILEISWLFAKG Trigger: TCCTTTTGCAAATAACCAAGATATTTCCAGGATTCAAGACCAGTCCATGGTTTTAGGCCTCTGCTGTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS TCA 72 bp | CACCTGTGGAATGTGAATGCTATACAATATAGCACCTaGTGTCCAGTAAACAATAATGAGTCTCCTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: HLWNVNAIQYST*CPVNNNESPMK Trigger: CTTCATAGGAGACTCATTATTGTTTACTGGACATCAGGTGCTATATTGTATAGCATTCACATTCCACAGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CCA 72 bp | CACCAAAATTATACTCTTTACTTAAGGCTCCATCACTaGGTTCTGTCTACAGTATCCTCTCTATGCAAAACA | + |
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Preference number: 6 (lower is better) Translates to: HQNYTLYLRLHH*VLSTVSSLCKT Trigger: TGTTTTGCATAGAGAGGATACTGTAGACAGAACCCAGTGATGGAGCCTTAAGTAAAGAGTATAATTTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS CAA 72 bp | GAAATCAAGGTTTACTTATTTTTGTACTCCTGGTACTaGATACCATGCCTAGTGCATAGTTGGTGCCCAATT | + |
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Preference number: 6 (lower is better) Translates to: EIKVYLFLYSWY*IPCLVHSWCPI Trigger: AATTGGGCACCAACTATGCACTAGGCATGGTATCAAGTACCAGGAGTACAAAAATAAGTAAACCTTGATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CAA 72 bp | GCCATACTCTCTCCAAATTCAGACAGTAGGTGGATATaGGGCTTTAGTGGTAATATATTTAAGATGACTGGT | + |
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Preference number: 6 (lower is better) Translates to: AILSPNSDSRWI*GFSGNIFKMTG Trigger: ACCAGTCATCTTAAATATATTACCACTAAAGCCCAATATCCACCTACTGTCTGAATTTGGAGAGAGTATGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS TCA 72 bp | CCATGCCTAGTGCATAGTTGGTGCCCAATTAATACATaGTTGGATTATAGCATAATCACTGATCACTACATT | + |
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Preference number: 6 (lower is better) Translates to: PCLVHSWCPINT*LDYSIITDHYI Trigger: AATGTAGTGATCAGTGATTATGCTATAATCCAATCATGTATTAATTGGGCACCAACTATGCACTAGGCATGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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| CDS CAA 90 bp | CTAACATTAGCCATACTCTCTCCAAATTCAGACAGTAGGTGGATATaGGGCTTTAGTGGTAATATATTTAAGATGACTGGTTTAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LTLAILSPNSDSRWI*GFSGNIFKMTGLVF Trigger: AAAGACTAAACCAGTCATCTTAAATATATTACCACTAAAGCCCAATATCCACCTACTGTCTGAATTTGGAGAGAGTATGGCTAATGTTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620864.1 |
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| CDS CAA 72 bp | AATTATAGAAACAACAGGAACCAAAACTCATTAATGTaGAGCTACAAACCAGAGGGAAGCTTCTTTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: NYRNNRNQNSLM*SYKPEGSFFLK Trigger: TTTGAGAAAGAAGCTTCCCTCTGGTTTGTAGCTCAACATTAATGAGTTTTGGTTCCTGTTGTTTCTATAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355430.4 ENST00000532918.4 ENST00000540738.3 ENST00000620864.1 ENST00000669257.1 |
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