RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL9A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000049089

Ensembl transcript IDs: ENST00000372736.3, ENST00000372748.8, ENST00000417105.6, ENST00000427563.1, ENST00000461118.6, ENST00000466267.1, ENST00000482722.5, ENST00000488463.6, ENST00000490132.1, ENST00000495948.1, ENST00000496215.5, ENST00000642679.1

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTAGCTGGGCAGGGCCCGGGCCTCCCGAGGTGCCCATGTCCCACTaGCCCAAGGACAAGATGGCCAGTGGAGAAAGGTGCAGATTAAGA +
Preference number: 1 (lower is better)
Translates to: CSWAGPGPPEVPMSH*PKDKMASGERCRLR
Trigger: TCTTAATCTGCACCTTTCTCCACTGGCCATCTTGTCCTTGGGTCAGTGGGACATGGGCACCTCGGGAGGCCCGGGCCCTGCCCAGCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR TCA 90 bp CTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCAGAGAGTaGGATGGGATCAGGAACTGGCATAGACCTCAGTCATTGGTCCTC +
Preference number: 1 (lower is better)
Translates to: LRGVTQQQSPGRSRE*DGIRNWHRPQSLVL
Trigger: GAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCCATCTCACTCTCTGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR GCA 90 bp AAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTaGCCTGTGTGTTGGCCTCACTTTTTCACCCATCAGTGCTCTACC +
Preference number: 1 (lower is better)
Translates to: KAALFLQRFDSIDTT*PVCWPHFFTHQCST
Trigger: GGTAGAGCACTGATGGGTGAAAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR CCA 90 bp TCCCGAGGTGCCCATGTCCCACTGACCCAAGGACAAGATGGCCAGTaGAGAAAGGTGCAGATTAAGATGTTTGTTTTGGTAACAGCCGAA +
Preference number: 1 (lower is better)
Translates to: SRGAHVPLTQGQDGQ*RKVQIKMFVLVTAE
Trigger: TTCGGCTGTTACCAAAACAAACATCTTAATCTGCACCTTTCTCCACTGGCCATCTTGTCCTTGGGTCAGTGGGACATGGGCACCTCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR TCA 90 bp TGGAGAAAGGTGCAGATTAAGATGTTTGTTTTGGTAACAGCCGAATaGTGCTCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCG +
Preference number: 1 (lower is better)
Translates to: WRKVQIKMFVLVTAE*CSLEGKPPYSFSAS
Trigger: CGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGAGCATCATTCGGCTGTTACCAAAACAAACATCTTAATCTGCACCTTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CCA 90 bp TCAGTCATTGGTCCTCAAGCTGAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGGGGGAGATGGTTTCCTaGACTGGGGATGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: SVIGPQAEGWNCSWAGPGGEMVS*TGDGCM
Trigger: CATGCACCCATCCCCAGTCCAGGAAACCATCTCCCC...CCCGGGCCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR GCA 90 bp TTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTTTTCCTTCCCGCCAGGATaGCTGCCAGGCTCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: FSASTPSTPLALCVGLTFSFPPG*LPGSVW
Trigger: CCAGACAGAGCCTGGCAGGCATCCTGGCGGGAAGGA...AAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CCA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCACCGAATGATGCTCGCTaGAAGGAAAGCCGCCCTATT +
Preference number: 2 (lower is better)
Translates to: KGIAASGESPSSSHLVGPPNDAR*KESRPI
Trigger: AATAGGGCGGCTTTCCTTCCAGCGAGCATCATTCGG...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CCA 90 bp TCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACCAGACAGAAGGTCCTaGGGGAGATGGTTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: SLEGKPPYSFSASTPSTPPDRRS*GRWFPG
Trigger: TCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGG...TGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CCA 90 bp TGGGGCTGGCTTAAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACGATGGGATCAGGAACTaGCATAGACCTCAGTCATTG +
Preference number: 2 (lower is better)
Translates to: WGWLKGIAASGESPSSSHDGIRN*HRPQSL
Trigger: CAATGACTGAGGTCTATGCCAGTTCCTGATCCCATC...GTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTTAAGCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CCA 90 bp TTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTTTTTCCTGGACTGGGGATaGGTGCATGTCCACCCAGAG +
Preference number: 2 (lower is better)
Translates to: FSASTPSTPLALCVGLTFFLDWG*VHVHPE
Trigger: CTCTGGGTGGACATGCACCCATCCCCAGTCCAGGAA...AAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CCA 90 bp TTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTTTAGGTCCTGGGGGAGATaGTTTCCTGGACTGGGGATG +
Preference number: 2 (lower is better)
Translates to: FSASTPSTPLALCVGLTFRSWGR*FPGLGM
Trigger: CATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCT...AAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR CAA 90 bp GAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTaGCCCTGTGTGTTGGCCTCACTTTTTCACCCATCAGTGCTCTAC +
Preference number: 2 (lower is better)
Translates to: ESRPIPSALRLHRHH*PCVLASLFHPSVLY
Trigger: GTAGAGCACTGATGGGTGAAAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR GCA 90 bp ACTCCAATATCCTGGTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCCCGGGCCTCCCGAGGTaGCCATGTCCCACTGACCCA +
Preference number: 2 (lower is better)
Translates to: TPISWFVPNLGAFIYRKAPGLPR*PCPTDP
Trigger: TGGGTCAGTGGGACATGGGCACCTCGGGAGGCCCGG...GGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CCA 90 bp ACTCCAATATCCTGGTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCCACCCAGAGGGGACCTaGTCCTTCCCGCCAGGATGC +
Preference number: 2 (lower is better)
Translates to: TPISWFVPNLGAFIYRKAHPEGT*SFPPGC
Trigger: GCATCCTGGCGGGAAGGACCAGGTCCCCTCTGGGTG...GGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CCA 90 bp GGGATCAGGAACTGGCATAGACCTCAGTCATTGGTCCTCAAGCTGAGGGGTGGAGGACAAGATGGCCAGTaGAGAAAGGTGCAGATTAAG +
Preference number: 2 (lower is better)
Translates to: GIRNWHRPQSLVLKLRGGGQDGQ*RKVQIK
Trigger: CTTAATCTGCACCTTTCTCCACTGGCCATCTTGTCC...TCCACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CCA 90 bp ACTCCAATATCCTGGTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCGATGGTTTCCTGGACTaGGGATGGGTGCATGTCCAC +
Preference number: 2 (lower is better)
Translates to: TPISWFVPNLGAFIYRKADGFLD*GWVHVH
Trigger: GTGGACATGCACCCATCCCCAGTCCAGGAAACCATC...GGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR GCA 90 bp ACTCCAATATCCTGGTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCGCCAGTGGAGAAAGGTaGAGATTAAGATGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: TPISWFVPNLGAFIYRKAASGER*RLRCLF
Trigger: AAACAAACATCTTAATCTGCACCTTTCTCCACTGGC...GGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR CCA 72 bp GTCATTGGTCCTCAAGCTGAGGGGTGGAACTGTAGCTaGGCAGGGCCCGGGCCTCCCGAGGTGCCCATGTCC +
Preference number: 3 (lower is better)
Translates to: VIGPQAEGWNCS*AGPGPPEVPMS
Trigger: GGACATGGGCACCTCGGGAGGCCCGGGCCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR CCA 72 bp CGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTaGCCTCACTTTTTCACCCATCAGTGCTCTACCTCC +
Preference number: 3 (lower is better)
Translates to: RFDSIDTTCPVC*PHFFTHQCSTS
Trigger: GGAGGTAGAGCACTGATGGGTGAAAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR-3UTR CAA 90 bp GGGATCAGGAACTGGCATAGACCTCAGTCATTGGTCCTCAAGCTGAGGGGTGGACACTTGCCCTGTGTGTaGGCCTCACTTTTTCACCCA +
Preference number: 3 (lower is better)
Translates to: GIRNWHRPQSLVLKLRGGHLPCV*ASLFHP
Trigger: TGGGTGAAAAAGTGAGGCCAACACACAGGGCAAGTG...TCCACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR GCA 72 bp CTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTaGCCTGTGTGTTGGCCTCACTTTTTCACCCATCAG +
Preference number: 3 (lower is better)
Translates to: LFLQRFDSIDTT*PVCWPHFFTHQ
Trigger: CTGATGGGTGAAAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR CCA 72 bp GCCCATGTCCCACTGACCCAAGGACAAGATGGCCAGTaGAGAAAGGTGCAGATTAAGATGTTTGTTTTGGTA +
Preference number: 3 (lower is better)
Translates to: AHVPLTQGQDGQ*RKVQIKMFVLV
Trigger: TACCAAAACAAACATCTTAATCTGCACCTTTCTCCACTGGCCATCTTGTCCTTGGGTCAGTGGGACATGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGCCTCCCGAGGTGCCCATGTCCAGCGGCGGCCATGGCTaGCGGCGAGACCAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: EGWNCSWAGPGPPEVPMSSGGHG*RRDQGG
Trigger: TCCCCCTTGGTCTCGCCGCCAGCCATGGCCGCCGCT...GGACATGGGCACCTCGGGAGGCCCGGGCCCTGCCCAGCTACAGTTCCACCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGCCTCCCGAGGTGCCCATGTCCGAGTCCTGGGATCCCTaGGGGCCCAGGCATCCCGGG +
Preference number: 4 (lower is better)
Translates to: EGWNCSWAGPGPPEVPMSESWDP*GPRHPG
Trigger: CCCGGGATGCCTGGGCCCCCAGGGATCCCAGGACTC...GGACATGGGCACCTCGGGAGGCCCGGGCCCTGCCCAGCTACAGTTCCACCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGCCTCCCGAGGTGCCCATGTCCCTCCCCAGCTCGGCCTaGCGGTCCCCTAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: EGWNCSWAGPGPPEVPMSLPSSA*RSPRTF
Trigger: GAAGGTCCTAGGGGACCGCCAGGCCGAGCTGGGGAG...GGACATGGGCACCTCGGGAGGCCCGGGCCCTGCCCAGCTACAGTTCCACCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGCCTCCCGAGGTGCCCATGTCCACCTTCCTCACCCGGTaGCCCAGTGGCACCGATAGC +
Preference number: 4 (lower is better)
Translates to: EGWNCSWAGPGPPEVPMSTFLTR*PSGTDS
Trigger: GCTATCGGTGCCACTGGGCCACCGGGTGAGGAAGGT...GGACATGGGCACCTCGGGAGGCCCGGGCCCTGCCCAGCTACAGTTCCACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGCCTCCCGAGGTGCCCATGTCCCATGCCAGGCGTGCCTaGGGTCCCATCCTTGCCGTT +
Preference number: 4 (lower is better)
Translates to: EGWNCSWAGPGPPEVPMSHARRA*GPILAV
Trigger: AACGGCAAGGATGGGACCCCAGGCACGCCTGGCATG...GGACATGGGCACCTCGGGAGGCCCGGGCCCTGCCCAGCTACAGTTCCACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp TCAGTCATTGGTCCTCAAGCTGAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGGCCCGGGCTGGCCCTTaGCTCCAGGGATCCCCATGG +
Preference number: 4 (lower is better)
Translates to: SVIGPQAEGWNCSWAGPGARAGP*LQGSPW
Trigger: CCATGGGGATCCCTGGAGTCAAGGGCCAGCCCGGGC...CCCGGGCCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGCGCCCGCATCCCCGCTaGGGCCAGGGTAGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGRPHPR*GQGSRV
Trigger: AACCCGGCTACCCTGGCCCCAGCGGGGATGCGGGCG...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TCAGTCATTGGTCCTCAAGCTGAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGGTAGCCCTGAACCCCTaGGGCGCCCGCATCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SVIGPQAEGWNCSWAGPGVALNP*GARIPA
Trigger: AGCGGGGATGCGGGCGCCCCAGGGGTTCAGGGCTAC...CCCGGGCCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp AGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCACCCACCAAGGGGGACGGGTaGGTGTCCGCGCACGCACCG +
Preference number: 4 (lower is better)
Translates to: RRSWGRWFPGLGMGACPPTKGDG*VSAHAP
Trigger: CGGTGCGTGCGCGGACACGCACCCGTCCCCCTTGGT...GGGTGGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGCCACGGCTCCCACGATaGCAGGAACGCCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGPRLPR*QERPEG
Trigger: GCCCTCGGGGCGTTCCTGGCATCGTGGGAGCCGTGG...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp TGGGGCTGGCTTAAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCCGGGCCTCCCGAGGTaGCCATGTCCCACTGACCCA +
Preference number: 4 (lower is better)
Translates to: WGWLKGIAASGESPSSSHPGLPR*PCPTDP
Trigger: TGGGTCAGTGGGACATGGGCACCTCGGGAGGCCCGG...GTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTTAAGCCAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGCCGGCCAGGGAGTCCTaGGATCCCTGGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GKPPYSFSASTPSTPLALPARES*DPWGPR
Trigger: CCTGGGCCCCCAGGGATCCCAGGACTCCCTGGCCGG...CAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp AGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGGGGCCCTGCCTTCCCTaGGGGCCTGGTTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: SRPIPSALRLHRHHLPCVGPCLP*GPGCPT
Trigger: AGTGGGGCAACCAGGCCCTCAGGGAAGGCAGGGCCC...CACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp AGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCACCCTGCCCATGGGGGCCCTaGTTGCCTGGGTACCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRSWGRWFPGLGMGACPPCPWGP*LPGYPG
Trigger: CCCTGGGTACCCAGGCAAGCAGGGCCCCCATGGGCA...GGGTGGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp TGGGGCTGGCTTAAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCCTTGGGCCCCGTGTTaGCGATCTGACCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: WGWLKGIAASGESPSSSHPWAPC*RSDPRL
Trigger: GAGCCGTGGGTCAGATCGGCAACACGGGGCCCAAGG...GTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTTAAGCCAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp GAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGCCTCCCGAGGTGCCCATGTCCTTTTTCACCCATCAGTaGTCTACCTCCCCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: EGWNCSWAGPGPPEVPMSFFTHQ*STSPSP
Trigger: GGGGGAAGGGGAGGTAGAGCACTGATGGGTGAAAAA...GGACATGGGCACCTCGGGAGGCCCGGGCCCTGCCCAGCTACAGTTCCACCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCAGGGCCCTGCCATGCCTaGGTAGCCCCTGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: KGIAASGESPSSSHLVGPGPCHA*VAPDAL
Trigger: CAGGGCATCAGGGGCTACCCAGGCATGGCAGGGCCC...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTCTCCCGGGCTGTCCTaGCACGCCTCGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GKPPYSFSASTPSTPLALSPGLS*HASVPG
Trigger: GCCGGGAACCGAGGCGTGCCAGGACAGCCCGGGAGA...CAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TCAGTCATTGGTCCTCAAGCTGAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGCCAGGGCTTCCCGCTTaGCACTCACGGCGACCTCTG +
Preference number: 4 (lower is better)
Translates to: SVIGPQAEGWNCSWAGPGPGLPA*HSRRPL
Trigger: CAGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGG...CCCGGGCCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTCAGCCCCACGGGGCCTaGCAGGCCAGGTCGACCTGC +
Preference number: 4 (lower is better)
Translates to: PSALRLHRHHLPCVLASLQPHGA*QARSTC
Trigger: GCAGGTCGACCTGGCCTGCCAGGCCCCGTGGGGCTG...AAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTGGGTGGAACTGTAGCTaGGCAGGGCCCGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PDRRSWGRWFPGLGMGACGWNCS*AGPGPP
Trigger: GGGAGGCCCGGGCCCTGCCCAGCTACAGTTCCACCC...ACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp TGGGGCTGGCTTAAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTCCTTTCGGGCCTGTaGTCCCCTGGGGTCCACGAA +
Preference number: 4 (lower is better)
Translates to: WGWLKGIAASGESPSSSHLLSGL*SPGVHE
Trigger: TTCGTGGACCCCAGGGGATCACAGGCCCGAAAGGAG...GTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTTAAGCCAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCACTCCATCCTTGCCGTTaGTTGCCTGGCCAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: KGIAASGESPSSSHLVGPLHPCR*LPGQAG
Trigger: GCCGGCCTGGCCAGGCAATCAACGGCAAGGATGGAG...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp GGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGCTGGGTCACCCACTTTaGCGCGGGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GKPPYSFSASTPSTPLALLGHPL*RGARSS
Trigger: GGAAGACCGGGCCCCGCGGCAAAGTGGGTGACCCAG...CAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCAGCCCCGCTCTCCCGGTaGACCTCTAATCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KGIAASGESPSSSHLVGPAPLSR*TSNLRQ
Trigger: CTGGCGCAGATTAGAGGTCCACCGGGAGAGCGGGGC...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GCTCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACGCCCTGGGGACCCGGTaGTCCAGGGATGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ARWKESRPIPSALRLHRHALGTR*SRDALL
Trigger: GAGCAAGGCATCCCTGGACCACCGGGTCCCCAGGGC...GTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTACACCCGCTAGGCCCTaGTGGCCTGGACTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: PDRRSWGRWFPGLGMGACTPARP*WPGLPG
Trigger: GCCCGGAAGTCCAGGCCACCAGGGCCTAGCGGGTGT...ACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCACGATGTGCTGGTCAGTaGCATCCCGGCCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: KGIAASGESPSSSHLVGPRCAGQ*HPGPPR
Trigger: GCGTGGAGGGCCGGGATGCCACTGACCAGCACATCG...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp CCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCCGTGTTGCCGATCTaGCCCACGGCTCCCACGATG +
Preference number: 4 (lower is better)
Translates to: PDRRSWGRWFPGLGMGACPVLPI*PTAPTM
Trigger: CATCGTGGGAGCCGTGGGTCAGATCGGCAACACGGG...ACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp TCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACAGGCCAGGTCGACCTaGCTCTCCTGGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLEGKPPYSFSASTPSTPQARST*LSWSPW
Trigger: CCAGGGGCTCCAGGAGAGGCAGGTCGACCTGGCCTG...TGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCCCCCGATGGTCCATCTaGTCCAGGGTCCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSPRWSI*SRVPLG
Trigger: CCCAAGGGGGACCCTGGACCAGATGGACCATCGGGG...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCTCCTGGGGGCCCCGATaGTCCATCTGGTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSSWGPR*SIWSRV
Trigger: GACCCTGGACCAGATGGACCATCGGGGCCCCCAGGA...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGCCAGGAAGCCCGGGCTaGCCCTTGACTCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: SRPIPSALRLHRHHLPCVPGSPG*PLTPGI
Trigger: GATCCCTGGAGTCAAGGGCCAGCCCGGGCTTCCTGG...CACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGCACTCCCTGCAGCCCTaGGGGACCTTTCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGHSLQP*GTFHSG
Trigger: CCCGGAATGAAAGGTCCCCCAGGGCTGCAGGGAGTG...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGCCCGGCTTCCCCTGGTaGCCAGGATCACCCAGAATC +
Preference number: 4 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGPGFPW*PGSPRI
Trigger: GATTCTGGGTGATCCTGGCCACCAGGGGAAGCCGGG...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGGGACCCGGCTTCCCCTaGTGGCCAGGATCACCCAGA +
Preference number: 4 (lower is better)
Translates to: GKPPYSFSASTPSTPLALGPGFP*WPGSPR
Trigger: TCTGGGTGATCCTGGCCACCAGGGGAAGCCGGGTCC...CAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TCAGTCATTGGTCCTCAAGCTGAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGGGACCCCTCTCGCCTTaGTCACCCTTCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SVIGPQAEGWNCSWAGPGGPLSP*SPFCPM
Trigger: CATGGGACAGAAGGGTGACCAAGGCGAGAGGGGTCC...CCCGGGCCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTCGACCTGCCTCTCCTaGAGCCCCTGGGGACCCTCG +
Preference number: 4 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHSTCLS*SPWGPS
Trigger: CGAGGGTCCCCAGGGGCTCCAGGAGAGGCAGGTCGA...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp AGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGCATCTGGCCCAGCTTTaGCAGGCTCGCCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SRPIPSALRLHRHHLPCVHLAQL*QARPWV
Trigger: GACCCAAGGGCGAGCCTGGCAAAGCTGGGCCAGATG...CACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGGGTCCAGGGATGCCTTaGTCTCCAGAGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGGPGMP*SPEAPT
Trigger: TGTGGGTGCCTCTGGAGAGCAAGGCATCCCTGGACC...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCACACGAATACCTGGGCTaGCCTCGTCACCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KGIAASGESPSSSHLVGPHEYLG*PRHPSP
Trigger: GGGAGAAGGGTGACGAGGGCAGCCCAGGTATTCGTG...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACCTGCACTGCCCTTCATaGCAGGCGTGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHLHCPS*QACLGS
Trigger: GGACCCCAGGCACGCCTGGCATGAAGGGCAGTGCAG...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp CCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCTGGAGGACCCATCATaGCCACCGCACCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PDRRSWGRWFPGLGMGACLEDPS*PPHPGL
Trigger: AAGCCCTGGGTGCGGTGGGCATGATGGGTCCTCCAG...ACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp AGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTCCTTCCCGCCAGGATaGCTGCCAGGCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SRPIPSALRLHRHHLPCVSFPPG*LPGSVW
Trigger: CCAGACAGAGCCTGGCAGGCATCCTGGCGGGAAGGA...CACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTAGGACTCCTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTTGCCAGGCTCGCCCTTaGGTCCCGGAGGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LGLLSPRQKVLGEMVSWTCQARP*VPEGQL
Trigger: AAGCTGGCCCTCCGGGACCCAAGGGCGAGCCTGGCA...AGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAGGAGTCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGCTTCCAGACCCTGGATaGTTCCCGGGCGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGLPDPG*FPGDQV
Trigger: AACCTGGTCGCCCGGGAACCATCCAGGGTCTGGAAG...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCGGGCCTGTGATCCCCTaGGGTCCACGAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSGPVIP*GPRIPG
Trigger: CCCAGGTATTCGTGGACCCCAGGGGATCACAGGCCC...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTAGGACTCCTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTCCCGCTAGGCCCTGGTaGCCTGGACTTCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGLLSPRQKVLGEMVSWTPARPW*PGLPGC
Trigger: ACAGCCCGGAAGTCCAGGCCACCAGGGCCTAGCGGG...AGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAGGAGTCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCAGGGCCCGGCTCACCCTaGTCTCCAGGGCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SLEGKPPYSFSASTPSTPGPGSP*SPGPPF
Trigger: AAAAGGAGGCCCTGGAGACCAGGGTGAGCCGGGCCC...TGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACGCCTGGTTGCCCCACTaGACCCCTCTCGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHAWLPH*TPLALV
Trigger: GACCAAGGCGAGAGGGGTCCAGTGGGGCAACCAGGC...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACACGCCTGGCAAGCCTTaGGGCCCTGGAATTCCGGGG +
Preference number: 4 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHTPGKP*GPGIPG
Trigger: CCCCGGAATTCCAGGGCCCCAAGGCTTGCCAGGCGT...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGGGGCCCGGTCTTCCCTaGGGAGCCCTTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SRPIPSALRLHRHHLPCVGPGLP*GALVSF
Trigger: AAAGGAGACAAGGGCTCCCCAGGGAAGACCGGGCCC...CACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACACCCAGAGGGGACCTaGTCCTTCCCGCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SLEGKPPYSFSASTPSTPHPEGT*SFPPGC
Trigger: GCATCCTGGCGGGAAGGACCAGGTCCCCTCTGGGTG...TGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGCCTCAAGCTGAGGGGTaGAACTGTAGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGPQAEG*NCSWAG
Trigger: CCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGG...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTGCCCCTTCACTCCCTaGAGCCCTGGGGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHCPFTP*SPGGPF
Trigger: GAAAGGTCCCCCAGGGCTGCAGGGAGTGAAGGGGCA...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCGCCACATCCACGATGTaGTGGTCAGTGGCATCCCGG +
Preference number: 4 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSATSTM*WSVASR
Trigger: CCGGGATGCCACTGACCAGCACATCGTGGATGTGGC...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACCTGCCTTCCAGACCCTaGATGGTTCCCGGGCGACCA +
Preference number: 4 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHLPSRP*MVPGRP
Trigger: TGGTCGCCCGGGAACCATCCAGGGTCTGGAAGGCAG...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCCTTGCCGTTGATGCCTaGGGGGCCCGTTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSLAVDA*GARCSF
Trigger: AAAGGAGCAACGGGCCCCCCAGGCATCAACGGCAAG...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCTTCTCCTCGAGGCCCTaGCTCTCCCTCTTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSFSSRP*LSLFPR
Trigger: CCTGGGAAAGAGGGAGAGCCAGGGCCTCGAGGAGAA...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCAGGGGAGATGGTTTCCTaGACTGGGGATGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: KGIAASGESPSSSHLVGPGEMVS*TGDGCM
Trigger: CATGCACCCATCCCCAGTCCAGGAAACCATCTCCCC...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCACCCAGGTCCTGGGGGAGATaGTTTCCTGGACTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RRSWGRWFPGLGMGACPPRSWGR*FPGLGM
Trigger: CATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCT...GGGTGGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCGGTGGACCTCTAATCTaGGCCAGAGCGAGCACTACC +
Preference number: 4 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSGGPLI*ARASTT
Trigger: GGTAGTGCTCGCTCTGGCGCAGATTAGAGGTCCACC...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCAACAGGAAATCCGCACTaGCTTCCAGACCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: KGIAASGESPSSSHLVGPTGNPH*LPDPGW
Trigger: CCATCCAGGGTCTGGAAGGCAGTGCGGATTTCCTGT...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp GGGATCAGGAACTGGCATAGACCTCAGTCATTGGTCCTCAAGCTGAGGGGTGGACCGGTGGTCCAGGGATaGCTTGCTCTCCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GIRNWHRPQSLVLKLRGGPVVQG*LALQRH
Trigger: GTGCCTCTGGAGAGCAAGGCATCCCTGGACCACCGG...TCCACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTGTCCAGGGTCCCCCTTaGGGCCTCGGATTCCAATCT +
Preference number: 4 (lower is better)
Translates to: PSALRLHRHHLPCVLASLVQGPP*GLGFQS
Trigger: AGATTGGAATCCGAGGCCCCAAGGGGGACCCTGGAC...AAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TGGGGCTGGCTTAAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACTTCCGGGTGGACAGTTaGTTGGACACAGGAAATCCG +
Preference number: 4 (lower is better)
Translates to: WGWLKGIAASGESPSSSHFRVDS*LDTGNP
Trigger: CGGATTTCCTGTGTCCAACCAACTGTCCACCCGGAA...GTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTTAAGCCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GGGATCAGGAACTGGCATAGACCTCAGTCATTGGTCCTCAAGCTGAGGGGTGGACACCCACATCTCCCTTaGGACCCGGCTTCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GIRNWHRPQSLVLKLRGGHPHLP*DPASPG
Trigger: ACCAGGGGAAGCCGGGTCCCAAGGGAGATGTGGGTG...TCCACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GGGATCAGGAACTGGCATAGACCTCAGTCATTGGTCCTCAAGCTGAGGGGTGGACCTTTTGTCCCAGGCTaGCCTGGCACACCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: GIRNWHRPQSLVLKLRGGPFVPG*PGTPAR
Trigger: CCTAGCGGGTGTGCCAGGCCAGCCTGGGACAAAAGG...TCCACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GGGATCAGGAACTGGCATAGACCTCAGTCATTGGTCCTCAAGCTGAGGGGTGGAGTCTCCTTTGACGCCTaGCAAGCCTTGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GIRNWHRPQSLVLKLRGGVSFDA*QALGPW
Trigger: CCAGGGCCCCAAGGCTTGCCAGGCGTCAAAGGAGAC...TCCACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCTGGGTGGATCGGGGGAGGCCGGCCACCCCTaGGTCACCCACTTTGCCGCG +
Preference number: 4 (lower is better)
Translates to: VCTQLGSFYLQKGLGGSGEAGHP*VTHFAA
Trigger: CGCGGCAAAGTGGGTGACCCAGGGGTGGCCGGCCTC...CCCCGATCCACCCAGGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTACATCCACGATGTGCTaGTCAGTGGCATCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PSALRLHRHHLPCVLASLTSTMC*SVASRP
Trigger: GGGCCGGGATGCCACTGACCAGCACATCGTGGATGT...AAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGCCAGACAGAAGGTCCTaGGGGAGATGGTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGPDRRS*GRWFPG
Trigger: TCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGG...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp TTAGGACTCCTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGTGCCCATGTCCCACTaGCCCAAGGACAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: LGLLSPRQKVLGEMVSWTVPMSH*PKDKMA
Trigger: GGCCATCTTGTCCTTGGGTCAGTGGGACATGGGCAC...AGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAGGAGTCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp TTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTTTCCTTCATGCCAGGCGTaGCTGGGGTCCCATCCTTGC +
Preference number: 4 (lower is better)
Translates to: FSASTPSTPLALCVGLTFPSCQA*LGSHPC
Trigger: GCAAGGATGGGACCCCAGGCACGCCTGGCATGAAGG...AAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp GTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCTGGGTGGATCGGGGAATCCAGGAAGGCCCTaGGGGCCCGGCTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: VCTQLGSFYLQKGLGGSGNPGRP*GPGSPW
Trigger: CCAGGGTGAGCCGGGCCCGCAGGGCCTTCCTGGATT...CCCCGATCCACCCAGGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp GGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGACTCACGGCGACCTCTaGCAGTTGCTCTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GKPPYSFSASTPSTPLALTHGDL*QLLLQH
Trigger: ATGCTGCAAGAGCAACTGGCAGAGGTCGCCGTGAGT...CAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCACCCCCGAATGATGCTCGCTaGAAGGAAAGCCGCCCTATT +
Preference number: 4 (lower is better)
Translates to: RRSWGRWFPGLGMGACPPPNDAR*KESRPI
Trigger: AATAGGGCGGCTTTCCTTCCAGCGAGCATCATTCGG...GGGTGGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp CCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTCACCCTTCTGTCCCATaGTGCCCTGGGGACCAATTT +
Preference number: 4 (lower is better)
Translates to: PSALRLHRHHLPCVLASLHPSVP*CPGDQF
Trigger: AAATTGGTCCCCAGGGCATCATGGGACAGAAGGGTG...AAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTTGGTAACAGCCGAATaGTGCTCGCTGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGLVTAE*CSLEGK
Trigger: CTTTCCTTCCAGCGAGCATCATTCGGCTGTTACCAA...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp TTAGGACTCCTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTCATTGTCACCGTCGATaGCGTCGGATCCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: LGLLSPRQKVLGEMVSWTHCHRR*RRIQAL
Trigger: GAGTGCCTGGATCCGACGGCATCGACGGTGACAATG...AGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAGGAGTCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp TCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCATCCATCGACACCACTTaGCCTGTGTGTTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: SLEGKPPYSFSASTPSTPSIDTT*PVCWPH
Trigger: GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGA...TGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCGGGTGGACAGTTGGTTaGACACAGGAAATCCGCACT +
Preference number: 4 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSGWTVG*TQEIRT
Trigger: AGTGCGGATTTCCTGTGTCCAACCAACTGTCCACCC...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTTTGGGTCCACGAATACCTaGGCTGCCCTCGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: FSASTPSTPLALCVGLTFGSTNT*AALVTL
Trigger: AAGGGTGACGAGGGCAGCCCAGGTATTCGTGGACCC...AAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCAGATGGTTTCCTGGACTaGGGATGGGTGCATGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLEGKPPYSFSASTPSTPDGFLD*GWVHVH
Trigger: GTGGACATGCACCCATCCCCAGTCCAGGAAACCATC...TGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp TCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCAATGCCTTTATATCCATaGGGGCCCGTCTCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SLEGKPPYSFSASTPSTPMPLYP*GPVSPL
Trigger: CAAGGGAGAGACGGGCCCTCATGGATATAAAGGCAT...TGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCAATGATGTTTAAATACTaGGCTGGGAGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGIAASGESPSSSHLVGPMMFKY*AGRQGR
Trigger: CCTTCCCTGCCTCCCAGCTCAGTATTTAAACATCAT...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTAGGACTCCTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGCCAGGCTCCCCCTTaGCTCCAGTTAAACCATCAA +
Preference number: 4 (lower is better)
Translates to: LGLLSPRQKVLGEMVSWTGQAPP*LQLNHQ
Trigger: TTGATGGTTTAACTGGAGCCAAGGGGGAGCCTGGCC...AGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAGGAGTCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTTTCTCCACGTTTTCCCTTaGGCCCCGTGTTGCCGATCT +
Preference number: 4 (lower is better)
Translates to: FSASTPSTPLALCVGLTFLHVFP*APCCRS
Trigger: AGATCGGCAACACGGGGCCCAAGGGAAAACGTGGAG...AAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACGACCCAAGGACAAGATaGCCAGTGGAGAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHDPRTR*PVEKGA
Trigger: TGCACCTTTCTCCACTGGCCATCTTGTCCTTGGGTC...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGATTTACAGAAAGGCCTaGGTGGATCGGGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SRPIPSALRLHRHHLPCVIYRKA*VDRGER
Trigger: CCTTTCTCCCCGATCCACCCAGGCCTTTCTGTAAAT...CACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR CAA 72 bp GCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTaGGCCTCACTTTTTCACCCATCAGTGCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: ALRLHRHHLPCV*ASLFHPSVLYL
Trigger: GAGGTAGAGCACTGATGGGTGAAAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp GTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCTGGGTGGATCGGGGCCAGAATCCCGCGTTTaGCCGCATGCCCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: VCTQLGSFYLQKGLGGSGPESRV*PHAPSL
Trigger: GAGTGAAGGGGCATGCGGGCAAACGCGGGATTCTGG...CCCCGATCCACCCAGGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACACCTTTCATTCCGGGTaGACAGTTGGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHTFHSG*TVGWTQ
Trigger: CTGTGTCCAACCAACTGTCCACCCGGAATGAAAGGT...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGGGACAAGATGGCCAGTaGAGAAAGGTGCAGATTAAG +
Preference number: 4 (lower is better)
Translates to: GKPPYSFSASTPSTPLALGQDGQ*RKVQIK
Trigger: CTTAATCTGCACCTTTCTCCACTGGCCATCTTGTCC...CAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp ACTCCAATATCCTGGTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCCCCGGGCTTCCCGTCTaGCCCATCTGGCCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: TPISWFVPNLGAFIYRKAPGLPV*PIWPSF
Trigger: AAAGCTGGGCCAGATGGGCCAGACGGGAAGCCCGGG...GGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TCAGTCATTGGTCCTCAAGCTGAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGGGTTTGTACCCAACTTaGGAGCTTTTATTTACAGAA +
Preference number: 4 (lower is better)
Translates to: SVIGPQAEGWNCSWAGPGGLYPT*ELLFTE
Trigger: TTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACC...CCCGGGCCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCGTAACTCCAATATCCTaGTTTGTACCCAACTTGGGA +
Preference number: 4 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSVTPIS*FVPNLG
Trigger: TCCCAAGTTGGGTACAAACCAGGATATTGGAGTTAC...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp ACTCCAATATCCTGGTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCCTGTCCCGCCTGTCCTaGACTGCCCTTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: TPISWFVPNLGAFIYRKALSRLS*TALHAR
Trigger: CCTGGCATGAAGGGCAGTGCAGGACAGGCGGGACAG...GGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR GCA 90 bp AGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGGCCAGTGGAGAAAGGTaGAGATTAAGATGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SRPIPSALRLHRHHLPCVASGER*RLRCLF
Trigger: AAACAAACATCTTAATCTGCACCTTTCTCCACTGGC...CACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp ACTCCAATATCCTGGTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCTTGCCGTTGATTGCCTaGCCAGGCCGGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TPISWFVPNLGAFIYRKALPLIA*PGRPGS
Trigger: ACTCCCTGGCCGGCCTGGCCAGGCAATCAACGGCAA...GGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp TTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTTTGATGGGATCAGGAACTaGCATAGACCTCAGTCATTG +
Preference number: 4 (lower is better)
Translates to: FSASTPSTPLALCVGLTFDGIRN*HRPQSL
Trigger: CAATGACTGAGGTCTATGCCAGTTCCTGATCCCATC...AAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp GTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCTGGGTGGATCGGGGTCGGGGAGAAAGGGGTaGGGAGTTATGCGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: VCTQLGSFYLQKGLGGSGSGRKG*GVMRER
Trigger: TCTTTCTCGCATAACTCCCCACCCCTTTCTCCCCGA...CCCCGATCCACCCAGGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CCA 90 bp ACTCCAATATCCTGGTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCTGTCCCATGATGCCCTaGGGACCAATTTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: TPISWFVPNLGAFIYRKACPMMP*GPISPR
Trigger: TCGAGGAGAAATTGGTCCCCAGGGCATCATGGGACA...GGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR TCA 90 bp GTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCTGGGTGGATCGGGGGAAAGAGAAGGGAGATaGTGTTTAAATACTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VCTQLGSFYLQKGLGGSGEREGR*CLNTEL
Trigger: CAGCTCAGTATTTAAACATCATCTCCCTTCTCTTTC...CCCCGATCCACCCAGGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
3UTR CAA 72 bp GATAGAGTAACTCCAATATCCTGGTTTGTACCCAACTaGGGAGCTTTTATTTACAGAAAGGCCTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: DRVTPISWFVPN*GAFIYRKAWVD
Trigger: ATCCACCCAGGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGTTACTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS GCA 90 bp GCCGTAGCGGCGGCCATGGCTGGCGGCGAGACCAAGGGGGACGGGTaGGTGTCCGCGCACGCACCGACGGCAGAGTCTCCCGGCGCTCCT +
Preference number: 5 (lower is better)
Translates to: AVAAAMAGGETKGDG*VSAHAPTAESPGAP
Trigger: AGGAGCGCCGGGAGACTCTGCCGTCGGTGCGTGCGCGGACACGCACCCGTCCCCCTTGGTCTCGCCGCCAGCCATGGCCGCCGCTACGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000461118.6
ENST00000495948.1
CDS TCA 90 bp GAGAGGAGGGGGATGAGGCCTCGCTGTGAGCTGCGGCCGGCGGACTaGACAGCAGCTCCTTGTCTGTCGGCGGCTATAACGGGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: ERRGMRPRCELRPAD*TAAPCLSAAITGSA
Trigger: TGCGGAGCCCGTTATAGCCGCCGACAGACAAGGAGCTGCTGTTCAGTCCGCCGGCCGCAGCTCACAGCGAGGCCTCATCCCCCTCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461118.6
ENST00000488463.6
ENST00000490132.1
ENST00000496215.5
CDS CCA 90 bp GTCCTGGAGGACCCATCATGCCCACCGCACCCAGGGCTTCCCGCTTaGCACTCACGGCGACCTCTGCCAGTTGCTCTCCACGCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: VLEDPSCPPHPGLPA*HSRRPLPVALHALS
Trigger: AGACAGGGCGTGGAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGGGTGCGGTGGGCATGATGGGTCCTCCAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427563.1
CDS-3UTR CAA 90 bp TCAGTCATTGGTCCTCAAGCTGAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGACTCCTTGCTGTCCCTaGGGCCCCGGCTCGCCGGAC +
Preference number: 5 (lower is better)
Translates to: SVIGPQAEGWNCSWAGPGTPCCP*GPGSPD
Trigger: GTCCGGCGAGCCGGGGCCCAAGGGACAGCAAGGAGT...CCCGGGCCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCACCATGGGGGCCCTGCTaGCCTGGGTACCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: KGIAASGESPSSSHLVGPPWGPC*PGYPGG
Trigger: GCCCCCTGGGTACCCAGGCAAGCAGGGCCCCCATGG...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS GCA 90 bp TCTGCCAGTTGCTCTTGCAGCATCTTCAGCGCCACATCCACGATGTaGTGGTCAGTGGCATCCCGGCCCTCCACGCCCTGTCTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: SASCSCSIFSATSTM*WSVASRPSTPCLPG
Trigger: GCCCGGGAGACAGGGCGTGGAGGGCCGGGATGCCACTGACCAGCACATCGTGGATGTGGCGCTGAAGATGCTGCAAGAGCAACTGGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS-3UTR CAA 90 bp GGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTTGCCAGGCTCGCCCTaGGGTCCCGGAGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: GKPPYSFSASTPSTPLALLPGSP*GPGGPA
Trigger: AGCTGGCCCTCCGGGACCCAAGGGCGAGCCTGGCAA...CAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCAGCACCCACATCTCCCTaGGGACCCGGCTTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: KGIAASGESPSSSHLVGPAPTSP*GPGFPW
Trigger: CCAGGGGAAGCCGGGTCCCAAGGGAGATGTGGGTGC...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS GCA 90 bp TGCATGTCCACCCAGAGGGGACCTGGTCCTTCCCGCCAGGATGCCTaGCAGGCTCTGTCTGGGCCTGATGCTCAAGGCCCCTTGATGGAT +
Preference number: 5 (lower is better)
Translates to: CMSTQRGPGPSRQDA*QALSGPDAQGPLMD
Trigger: ATCCATCAAGGGGCCTTGAGCATCAGGCCCAGACAGAGCCTGGCAGGCATCCTGGCGGGAAGGACCAGGTCCCCTCTGGGTGGACATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372748.8
ENST00000482722.5
CDS GCA 90 bp AGGAGTCCGCCCTGGATCTGCCCGACTCCTTCCACTGTGCCAGTTTaGCCTTGCGCGGTCGCGGTGGGGAATAGATGGAGACGTGGACAG +
Preference number: 5 (lower is better)
Translates to: RSPPWICPTPSTVPV*PCAVAVGNRWRRGQ
Trigger: CTGTCCACGTCTCCATCTATTCCCCACCGCGACCGCGCAAGGGCAAACTGGCACAGTGGAAGGAGTCGGGCAGATCCAGGGCGGACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642679.1
CDS CCA 90 bp GTCCTGGAGGACCCATCATGCCCACCGCACCCAGGGCTTCCCGCTTaGCACTCACGGCGACCTCTGCCAGTTGCTCTTGCAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: VLEDPSCPPHPGLPA*HSRRPLPVALAASS
Trigger: TGAAGATGCTGCAAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGGGTGCGGTGGGCATGATGGGTCCTCCAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS-3UTR CAA 90 bp AGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCACCCGGTCCAGGGTCCCCCTaGGGGCCTCGGATTCCAATC +
Preference number: 5 (lower is better)
Translates to: RRSWGRWFPGLGMGACPPGPGSP*GPRIPI
Trigger: GATTGGAATCCGAGGCCCCAAGGGGGACCCTGGACC...GGGTGGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCAGCCCGGGCTGGCCCTaGACTCCAGGGATCCCCATG +
Preference number: 5 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSSPGWP*TPGIPM
Trigger: CATGGGGATCCCTGGAGTCAAGGGCCAGCCCGGGCT...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp TGGGGCTGGCTTAAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACTTCCCTGGGGAGCCCTaGTCTCCTTTGACGCCTGGC +
Preference number: 5 (lower is better)
Translates to: WGWLKGIAASGESPSSSHFPGEP*SPLTPG
Trigger: GCCAGGCGTCAAAGGAGACAAGGGCTCCCCAGGGAA...GTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTTAAGCCAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp TGGGGCTGGCTTAAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACTTCTCCACGTACTCCTaGCTGTCCCTTGGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: WGWLKGIAASGESPSSSHFSTYS*LSLGPR
Trigger: CCGGGGCCCAAGGGACAGCAAGGAGTACGTGGAGAA...GTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTTAAGCCAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp TCAGTCATTGGTCCTCAAGCTGAGGGGTGGAACTGTAGCTGGGCAGGGCCCGGGTCTCCATCCTTGCCGTaGATTGCCTGGCCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: SVIGPQAEGWNCSWAGPGSPSLP*IAWPGR
Trigger: CCGGCCTGGCCAGGCAATCAACGGCAAGGATGGAGA...CCCGGGCCCTGCCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS GCA 90 bp CCGCCCTGGATCTGCCCGACTCCTTCCACTGTGCCAGTTTGCCCTTaGGCGGTCGCGGTGGGGAATAGATGGAGACGTGGACAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: PPWICPTPSTVPVCP*AVAVGNRWRRGQLK
Trigger: TTTGAGCTGTCCACGTCTCCATCTATTCCCCACCGCGACCGCGCAAGGGCAAACTGGCACAGTGGAAGGAGTCGGGCAGATCCAGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642679.1
CDS-3UTR CAA 90 bp AGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCACCCCCCAGAATCCCGCGTTaGCCCGCATGCCCCTTCACT +
Preference number: 5 (lower is better)
Translates to: RRSWGRWFPGLGMGACPPPRIPR*PACPFT
Trigger: AGTGAAGGGGCATGCGGGCAAACGCGGGATTCTGGG...GGGTGGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp AGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTCCCTCCAGGGCCTCCTTTaGTCCCAGGCTGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: RQKVLGEMVSWTGDGCMSLQGLL*SQAGLA
Trigger: TGCCAGGCCAGCCTGGGACAAAAGGAGGCCCTGGAG...GGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp TTAGGACTCCTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTCCTGGGTCACCCACTTaGCCGCGGGGCCCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LGLLSPRQKVLGEMVSWTPGSPT*PRGPVF
Trigger: GAAGACCGGGCCCCGCGGCAAAGTGGGTGACCCAGG...AGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAGGAGTCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp TCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACCCAGGGCTTCCCGCTaGGCACTCACGGCGACCTCT +
Preference number: 5 (lower is better)
Translates to: SLEGKPPYSFSASTPSTPPRASR*ALTATS
Trigger: AGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGGG...TGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS CCA 90 bp TGTCAGGGCTGGTTTGAGGTTTTTGCAGAACAAACGGCGTCCTTGTaGTGCGGGCCGGCGCCGCCTATTGGCGACGAGGGGCACTACATC +
Preference number: 5 (lower is better)
Translates to: CQGWFEVFAEQTASL*CGPAPPIGDEGHYI
Trigger: GATGTAGTGCCCCTCGTCGCCAATAGGCGGCGCCGGCCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCAGCCCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495948.1
CDS-3UTR CAA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACCCATCTGGCCCAGCTTaGCCAGGCTCGCCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHPSGPA*PGSPLG
Trigger: ACCCAAGGGCGAGCCTGGCAAAGCTGGGCCAGATGG...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGGACCCCTCTCGCCTaGGTCACCCTTCTGTCCCAT +
Preference number: 5 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGWTPLA*VTLLSH
Trigger: ATGGGACAGAAGGGTGACCAAGGCGAGAGGGGTCCA...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCAGAGCCCTTGTCTCCTTaGACGCCTGGCAAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: KGIAASGESPSSSHLVGPEPLSP*TPGKPW
Trigger: CCAAGGCTTGCCAGGCGTCAAAGGAGACAAGGGCTC...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS TCA 90 bp TTGTCTGTCGGCGGCTATAACGGGCTCCGCATGTCAGGGCTGGTTTaGGGTTTTTGCAGAACAAACGGCGTCCTTGTGGTGCGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: LSVGGYNGLRMSGLV*GFCRTNGVLVVRAG
Trigger: GCCGGCCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCAGCCCTGACATGCGGAGCCCGTTATAGCCGCCGACAGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000490132.1
CDS TCA 90 bp CCCAGAGTGGGCTGGCCCTGGGTCTCTGGCAGGTCCACTTATTCCTaGCACTATCACAGCAAGCTGGCTCCTTCCCATGGTGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: PRVGWPWVSGRSTYS*HYHSKLAPSHGGHS
Trigger: GGAATGGCCACCATGGGAAGGAGCCAGCTTGCTGTGATAGTGTCAGGAATAAGTGGACCTGCCAGAGACCCAGGGCCAGCCCACTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000482722.5
CDS CCA 90 bp CAGCGCTCACAAAGTTCTCCTTTGTCTGCCGCCTCCCTCCCGCCCTaGTCTCAGGTTAGAGACTTACGTCGATGCCGTCGGATCCAGGCA +
Preference number: 5 (lower is better)
Translates to: QRSQSSPLSAASLPP*SQVRDLRRCRRIQA
Trigger: TGCCTGGATCCGACGGCATCGACGTAAGTCTCTAACCTGAGACCAGGGCGGGAGGGAGGCGGCAGACAAAGGAGAACTTTGTGAGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495948.1
CDS-3UTR CAA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTTCCAGGGGGCCCATaGTCACCGTCGATGCCGTCG +
Preference number: 5 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHFPGGP*SPSMPS
Trigger: CGACGGCATCGACGGTGACAATGGGCCCCCTGGAAA...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp GCTCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACTCTCCACGTTTTCCCTaGGGCCCCGTGTTGCCGATC +
Preference number: 5 (lower is better)
Translates to: ARWKESRPIPSALRLHRHSPRFP*GPVLPI
Trigger: GATCGGCAACACGGGGCCCAAGGGAAAACGTGGAGA...GTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp AAGGGTATAGCCGCCTCAGGGGAGTCACCCAGCAGCAGTCACCTGGTAGGTCCACCTCGATCTCCATCCTaGCCGTTGATTGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: KGIAASGESPSSSHLVGPPRSPS*PLIAWP
Trigger: TGGCCAGGCAATCAACGGCAAGGATGGAGATCGAGG...TGGACCTACCAGGTGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS CCA 90 bp GCTCCTTGTCTGTCGGCGGCTATAACGGGCTCCGCATGTCAGGGCTaGTTTGAGGTTTTTGCAGAACAAACGGCGTCCTTGTGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: APCLSAAITGSACQG*FEVFAEQTASLWCG
Trigger: CCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCAGCCCTGACATGCGGAGCCCGTTATAGCCGCCGACAGACAAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000490132.1
CDS-3UTR CAA 90 bp AGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGCGGGTGGACAGTTGGTaGGACACAGGAAATCCGCAC +
Preference number: 5 (lower is better)
Translates to: SRPIPSALRLHRHHLPCVRVDSW*DTGNPH
Trigger: GTGCGGATTTCCTGTGTCCAACCAACTGTCCACCCG...CACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp TTAGGACTCCTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTTGGTCCAGGGATGCCTaGCTCTCCAGAGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: LGLLSPRQKVLGEMVSWTWSRDA*LSRGTH
Trigger: GTGGGTGCCTCTGGAGAGCAAGGCATCCCTGGACCA...AGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAGGAGTCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS CCA 90 bp ATTCCCTCGAAGCCTTTCTGTTGTCCCCTCCTTCCCTGGGAGTTCTaGGGATCCTGCCCCATCCCTGAGGACTTACAGGAGGTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: IPSKPFCCPLLPWEF*GSCPIPEDLQEVQQ
Trigger: TTGCTGGACCTCCTGTAAGTCCTCAGGGATGGGGCAGGATCCCCAGAACTCCCAGGGAAGGAGGGGACAACAGAAAGGCTTCGAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000482722.5
CDS-3UTR CAA 90 bp CCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGTGCATGTGATGCTCAAGGCCCCTaGATGGATCCAGGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: PDRRSWGRWFPGLGMGACDAQGP*MDPGSV
Trigger: TACAGAGCCTGGATCCATCAAGGGGCCTTGAGCATC...ACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp TTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACCTCCATCGACACCACTaGCCCTGTGTGTTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: FLQRFDSIDTTCPVCWPHLHRHH*PCVLAS
Trigger: TGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAG...GTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS CCA 90 bp CTTCTGTCCCATGATGCCCTGGGGACCAATTTCTCCTCGAGGCCCTaGCTCTCCCCTGGGTCTCAGCTAATTTGCTTCATCAGGGAAGGT +
Preference number: 5 (lower is better)
Translates to: LLSHDALGTNFSSRP*LSPGSQLICFIREG
Trigger: ACCTTCCCTGATGAAGCAAATTAGCTGAGACCCAGGGGAGAGCCAGGGCCTCGAGGAGAAATTGGTCCCCAGGGCATCATGGGACAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466267.1
CDS CCA 90 bp GCCCGACTCCTTCCACTGTGCCAGTTTGCCCTTGCGCGGTCGCGGTaGGGAATAGATGGAGACGTGGACAGCTCAAATAAATCACAGATG +
Preference number: 5 (lower is better)
Translates to: ARLLPLCQFALARSR*GIDGDVDSSNKSQM
Trigger: CATCTGTGATTTATTTGAGCTGTCCACGTCTCCATCTATTCCCCACCGCGACCGCGCAAGGGCAAACTGGCACAGTGGAAGGAGTCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642679.1
CDS-3UTR CAA 90 bp TTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGTGTTGGCCTCACTTTTGGGCCAGGCTCCCCCTaGGCTCCAGTTAAACCATCA +
Preference number: 5 (lower is better)
Translates to: FSASTPSTPLALCVGLTFGPGSP*APVKPS
Trigger: TGATGGTTTAACTGGAGCCAAGGGGGAGCCTGGCCC...AAAAGTGAGGCCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp TTAGGACTCCTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTCTCTGCCAGTTGCTCTaGCAGCATCTTCAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: LGLLSPRQKVLGEMVSWTLCQLL*QHLQRH
Trigger: GTGGCGCTGAAGATGCTGCAAGAGCAACTGGCAGAG...AGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAGGAGTCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp GGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGCATAGACCTCAGTCATaGGTCCTCAAGCTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: GKPPYSFSASTPSTPLALHRPQS*VLKLRG
Trigger: ACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATG...CAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS CCA 90 bp CACTTATTCCTGACACTATCACAGCAAGCTGGCTCCTTCCCATGGTaGCCATTCCCTCGAAGCCTTTCTGTTGTCCCCTCCTTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: HLFLTLSQQAGSFPW*PFPRSLSVVPSFPG
Trigger: CCCAGGGAAGGAGGGGACAACAGAAAGGCTTCGAGGGAATGGCCACCATGGGAAGGAGCCAGCTTGCTGTGATAGTGTCAGGAATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000482722.5
CDS-3UTR CAA 90 bp TCGCTGGAAGGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACACTTGCCCTGTGTGTaGGCCTCACTTTTTCACCCA +
Preference number: 5 (lower is better)
Translates to: SLEGKPPYSFSASTPSTPHLPCV*ASLFHP
Trigger: TGGGTGAAAAAGTGAGGCCAACACACAGGGCAAGTG...TGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp CTGAGTCCCAGACAGAAGGTCCTGGGGGAGATGGTTTCCTGGACTGGGGATGGGCTCCAATATCCTGGTTaGTACCCAACTTGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: LSPRQKVLGEMVSWTGDGLQYPG*YPTWEL
Trigger: AAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAG...CCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGACCTTCTGTCTGGGACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS CCA 90 bp GTCCACTTATTCCTGACACTATCACAGCAAGCTGGCTCCTTCCCATaGTGGCCATTCCCTCGAAGCCTTTCTGTTGTCCCCTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: VHLFLTLSQQAGSFP*WPFPRSLSVVPSFP
Trigger: AGGGAAGGAGGGGACAACAGAAAGGCTTCGAGGGAATGGCCACCATGGGAAGGAGCCAGCTTGCTGTGATAGTGTCAGGAATAAGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000482722.5
CDS-3UTR CAA 90 bp GGGATCAGGAACTGGCATAGACCTCAGTCATTGGTCCTCAAGCTGAGGGGTGGAATTCCGGGTGGACAGTaGGTTGGACACAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: GIRNWHRPQSLVLKLRGGIPGGQ*VGHRKS
Trigger: GGATTTCCTGTGTCCAACCAACTGTCCACCCGGAAT...TCCACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp GGAAAGCCGCCCTATTCCTTCAGCGCTTCGACTCCATCGACACCACTTGCCCTGTGGTTTGTACCCAACTaGGGAGCTTTTATTTACAGA +
Preference number: 5 (lower is better)
Translates to: GKPPYSFSASTPSTPLALWFVPN*GAFIYR
Trigger: TCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCA...CAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS-3UTR CAA 90 bp ACTCCAATATCCTGGTTTGTACCCAACTTGGGAGCTTTTATTTACAGAAAGGCCGGCGACCTCTGCCAGTaGCTCTTGCAGCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: TPISWFVPNLGAFIYRKAGDLCQ*LLQHLQ
Trigger: CTGAAGATGCTGCAAGAGCAACTGGCAGAGGTCGCC...GGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGGTACAAACCAGGATATTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372748.8
CDS CCA 90 bp ACAAACAAACAGGCCTTTTCCATATTAATATGCCACAGTCCTTCCTaGATCAGCCGTCTCATGAATACTCCATCGGCCTCTTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: TNKQAFSILICHSPS*ISRLMNTPSASSSS
Trigger: AGAGCTGGAAGAGGCCGATGGAGTATTCATGAGACGGCTGATCCAGGAAGGACTGTGGCATATTAATATGGAAAAGGCCTGTTTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461118.6
CDS GCA 72 bp GCGGCCATGGCTGGCGGCGAGACCAAGGGGGACGGGTaGGTGTCCGCGCACGCACCGACGGCAGAGTCTCCC +
Preference number: 6 (lower is better)
Translates to: AAMAGGETKGDG*VSAHAPTAESP
Trigger: GGGAGACTCTGCCGTCGGTGCGTGCGCGGACACGCACCCGTCCCCCTTGGTCTCGCCGCCAGCCATGGCCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372736.3
ENST00000372748.8
ENST00000461118.6
ENST00000495948.1
CDS CCA 72 bp ATCCCGGCCCTCCACGCCCTGTCTCCCGGGCTGTCCTaGCACGCCTCGGTTCCCGGCCAGTCCTCGAGGGCC +
Preference number: 6 (lower is better)
Translates to: IPALHALSPGLS*HASVPGQSSRA
Trigger: GGCCCTCGAGGACTGGCCGGGAACCGAGGCGTGCCAGGACAGCCCGGGAGACAGGGCGTGGAGGGCCGGGAT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS CCA 72 bp GGCAGGTTCACAGAAGCCCGGCAGCCCCACGGGGCCTaGCAGGCCAGGTCGACCTGCCTCTCCTGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: GRFTEARQPHGA*QARSTCLSWSP
Trigger: GGGGCTCCAGGAGAGGCAGGTCGACCTGGCCTGCCAGGCCCCGTGGGGCTGCCGGGCTTCTGTGAACCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372748.8
ENST00000482722.5
CDS CCA 72 bp GTCCCAGGCTGGCCTGGCACACCCGCTAGGCCCTGGTaGCCTGGACTTCCGGGCTGTCCCGCCTGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: VPGWPGTPARPW*PGLPGCPACPA
Trigger: TGCAGGACAGGCGGGACAGCCCGGAAGTCCAGGCCACCAGGGCCTAGCGGGTGTGCCAGGCCAGCCTGGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372748.8
ENST00000482722.5
CDS CCA 72 bp CCAGTTGCTCTCCACGCCCTGTCTCCCGGGCTGTCCTaGCACGCCTCGGTTCCCGGCCAGTCCTCGAGGGCC +
Preference number: 6 (lower is better)
Translates to: PVALHALSPGLS*HASVPGQSSRA
Trigger: GGCCCTCGAGGACTGGCCGGGAACCGAGGCGTGCCAGGACAGCCCGGGAGACAGGGCGTGGAGAGCAACTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427563.1
CDS CCA 72 bp AACGGCGTCCTTGTGGTGCGGGCCGGCGCCGCCTATTaGCGACGAGGGGCACTACATCTCCGGGCACCCCGA +
Preference number: 6 (lower is better)
Translates to: NGVLVVRAGAAY*RRGALHLRAPR
Trigger: TCGGGGTGCCCGGAGATGTAGTGCCCCTCGTCGCCAATAGGCGGCGCCGGCCCGCACCACAAGGACGCCGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495948.1
CDS CAA 72 bp ATCCCGGGCTTCCCGTCTGGCCCATCTGGCCCAGCTTaGCCAGGCTCGCCCTTGGGTCCCGGAGGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: IPGFPSGPSGPA*PGSPLGPGGPA
Trigger: AGCTGGCCCTCCGGGACCCAAGGGCGAGCCTGGCAAAGCTGGGCCAGATGGGCCAGACGGGAAGCCCGGGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372748.8
ENST00000417105.6
ENST00000461118.6
ENST00000482722.5
ENST00000488463.6
ENST00000496215.5
ENST00000642679.1
CDS CAA 72 bp AAACGGCGTCCTTGTGGTGCGGGCCGGCGCCGCCTATaGGCGACGAGGGGCACTACATCTCCGGGCACCCCG +
Preference number: 6 (lower is better)
Translates to: KRRPCGAGRRRL*ATRGTTSPGTP
Trigger: CGGGGTGCCCGGAGATGTAGTGCCCCTCGTCGCCAATAGGCGGCGCCGGCCCGCACCACAAGGACGCCGTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495948.1
CDS CAA 90 bp GGTCCTGGAGGACCCATCATGCCCACCGCACCCAGGGCTTCCCGCTaGGCACTCACGGCGACCTCTGCCAGTTGCTCTCCACGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: GPGGPIMPTAPRASR*ALTATSASCSPRPV
Trigger: GACAGGGCGTGGAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGGGTGCGGTGGGCATGATGGGTCCTCCAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427563.1
CDS GCA 72 bp ACCCAGAGGGGACCTGGTCCTTCCCGCCAGGATGCCTaGCAGGCTCTGTCTGGGCCTGATGCTCAAGGCCCC +
Preference number: 6 (lower is better)
Translates to: TQRGPGPSRQDA*QALSGPDAQGP
Trigger: GGGGCCTTGAGCATCAGGCCCAGACAGAGCCTGGCAGGCATCCTGGCGGGAAGGACCAGGTCCCCTCTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372748.8
ENST00000482722.5
CDS CCA 72 bp TCACCCTGGTCTCCAGGGCCTCCTTTTGTCCCAGGCTaGCCTGGCACACCCGCTAGGCCCTGGTGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: SPWSPGPPFVPG*PGTPARPWWPG
Trigger: TCCAGGCCACCAGGGCCTAGCGGGTGTGCCAGGCCAGCCTGGGACAAAAGGAGGCCCTGGAGACCAGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372748.8
ENST00000482722.5
CDS CCA 72 bp GGGGACCCTCGATCTCCATCCTTGCCGTTGATTGCCTaGCCAGGCCGGCCAGGGAGTCCTGGGATCCCTGGG +
Preference number: 6 (lower is better)
Translates to: GDPRSPSLPLIA*PGRPGSPGIPG
Trigger: CCCAGGGATCCCAGGACTCCCTGGCCGGCCTGGCCAGGCAATCAACGGCAAGGATGGAGATCGAGGGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372748.8
ENST00000482722.5
CDS TCA 72 bp GAGGGGAAAGGAGAGGAGGGGGATGAGGCCTCGCTGTaGGCTGCGGCCGGCGGACTGAACAGCAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: EGKGEEGDEASL*AAAGGLNSSSL
Trigger: CAAGGAGCTGCTGTTCAGTCCGCCGGCCGCAGCTCACAGCGAGGCCTCATCCCCCTCCTCTCCTTTCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000461118.6
ENST00000488463.6
ENST00000490132.1
ENST00000496215.5
CDS CCA 72 bp AGGGCCCTGCCTTCCCTGAGGGCCTGGTTGCCCCACTaGACCCCTCTCGCCTTGGTCACCCTTCTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: RALPSLRAWLPH*TPLALVTLLSH
Trigger: ATGGGACAGAAGGGTGACCAAGGCGAGAGGGGTCCAGTGGGGCAACCAGGCCCTCAGGGAAGGCAGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS CCA 72 bp GACCCATCATGCCCACCGCACCCAGGGCTTCCCGCTTaGCACTCACGGCGACCTCTGCCAGTTGCTCTCCAC +
Preference number: 6 (lower is better)
Translates to: DPSCPPHPGLPA*HSRRPLPVALH
Trigger: GTGGAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGGGTGCGGTGGGCATGATGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427563.1
CDS CAA 72 bp TTCCCCTGGTGGCCAGGATCACCCAGAATCCCGCGTTaGCCCGCATGCCCCTTCACTCCCTGCAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: FPWWPGSPRIPR*PACPFTPCSPG
Trigger: CCCAGGGCTGCAGGGAGTGAAGGGGCATGCGGGCAAACGCGGGATTCTGGGTGATCCTGGCCACCAGGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372748.8
ENST00000417105.6
ENST00000482722.5
ENST00000488463.6
CDS CAA 72 bp GGACCCATCATGCCCACCGCACCCAGGGCTTCCCGCTaGGCACTCACGGCGACCTCTGCCAGTTGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: GPIMPTAPRASR*ALTATSASCSC
Trigger: GCAAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGGGTGCGGTGGGCATGATGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS CAA 72 bp GGACCCATCATGCCCACCGCACCCAGGGCTTCCCGCTaGGCACTCACGGCGACCTCTGCCAGTTGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: GPIMPTAPRASR*ALTATSASCSP
Trigger: TGGAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGGGTGCGGTGGGCATGATGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427563.1
CDS CAA 90 bp AAACCATCAATCCCGGGCTTCCCGTCTGGCCCATCTGGCCCAGCTTaGCCAGGCTCGCCCTTGGGTCCCGGAGGGCCAGCTTTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: KPSIPGFPSGPSGPA*PGSPLGPGGPAFPG
Trigger: CCCTGGAAAAGCTGGCCCTCCGGGACCCAAGGGCGAGCCTGGCAAAGCTGGGCCAGATGGGCCAGACGGGAAGCCCGGGATTGATGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372748.8
ENST00000417105.6
ENST00000461118.6
ENST00000482722.5
ENST00000488463.6
ENST00000496215.5
ENST00000642679.1
CDS TCA 72 bp GGGATGAGGCCTCGCTGTGAGCTGCGGCCGGCGGACTaGACAGCAGCTCCTTGTCTGTCGGCGGCTATAACG +
Preference number: 6 (lower is better)
Translates to: GMRPRCELRPAD*TAAPCLSAAIT
Trigger: CGTTATAGCCGCCGACAGACAAGGAGCTGCTGTTCAGTCCGCCGGCCGCAGCTCACAGCGAGGCCTCATCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461118.6
ENST00000488463.6
ENST00000490132.1
ENST00000496215.5
CDS GCA 72 bp GGAGTCCGCCCTGGATCTGCCCGACTCCTTCCACTGTaGCAGTTTGCCCTTGCGCGGTCGCGGTGGGGAATA +
Preference number: 6 (lower is better)
Translates to: GVRPGSARLLPL*QFALARSRWGI
Trigger: TATTCCCCACCGCGACCGCGCAAGGGCAAACTGGCACAGTGGAAGGAGTCGGGCAGATCCAGGGCGGACTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490132.1
ENST00000642679.1
CDS CCA 72 bp GACCCATCATGCCCACCGCACCCAGGGCTTCCCGCTTaGCACTCACGGCGACCTCTGCCAGTTGCTCTTGCA +
Preference number: 6 (lower is better)
Translates to: DPSCPPHPGLPA*HSRRPLPVALA
Trigger: TGCAAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGGGTGCGGTGGGCATGATGGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS CAA 72 bp GATCTTGCTGCAGGCTCTCCCCAGCTCCCGCCCACCTaGCTCCCCTCTCCTCTGGCTCCTTCCTCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: DLAAGSPQLPPT*LPSPLAPSSPS
Trigger: GCTTGGAGAGGAAGGAGCCAGAGGAGAGGGGAGCAAGGTGGGCGGGAGCTGGGGAGAGCCTGCAGCAAGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461118.6
CDS CAA 72 bp GGCTGGTTTGAGGTTTTTGCAGAACAAACGGCGTCCTaGTGGTGCGGGCCGGCGCCGCGTCGATGCCGTCGG +
Preference number: 6 (lower is better)
Translates to: GWFEVFAEQTAS*WCGPAPRRCRR
Trigger: CCGACGGCATCGACGCGGCGCCGGCCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000490132.1
CDS CAA 90 bp GGTCCTGGAGGACCCATCATGCCCACCGCACCCAGGGCTTCCCGCTaGGCACTCACGGCGACCTCTGCCAGTTGCTCTTGCAGCATCTTC +
Preference number: 6 (lower is better)
Translates to: GPGGPIMPTAPRASR*ALTATSASCSCSIF
Trigger: GAAGATGCTGCAAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCGGGAAGCCCTGGGTGCGGTGGGCATGATGGGTCCTCCAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS CCA 72 bp GACACAGGAAATCCGCACTGCCTTCCAGACCCTGGATaGTTCCCGGGCGACCAGGTTTCCCAGGGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: DTGNPHCLPDPG*FPGDQVSQGVL
Trigger: CAGGACCCCCTGGGAAACCTGGTCGCCCGGGAACCATCCAGGGTCTGGAAGGCAGTGCGGATTTCCTGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372748.8
ENST00000417105.6
ENST00000482722.5
ENST00000488463.6
CDS CCA 72 bp GCGTTTGCCCGCATGCCCCTTCACTCCCTGCAGCCCTaGGGGACCTTTCATTCCGGGTGGACAGTTGGTTGG +
Preference number: 6 (lower is better)
Translates to: AFARMPLHSLQP*GTFHSGWTVGW
Trigger: CCAACCAACTGTCCACCCGGAATGAAAGGTCCCCCAGGGCTGCAGGGAGTGAAGGGGCATGCGGGCAAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372748.8
ENST00000417105.6
ENST00000482722.5
ENST00000488463.6
CDS CAA 90 bp GCATGTCAGGGCTGGTTTGAGGTTTTTGCAGAACAAACGGCGTCCTaGTGGTGCGGGCCGGCGCCGCGTCGATGCCGTCGGATCCAGGCA +
Preference number: 6 (lower is better)
Translates to: ACQGWFEVFAEQTAS*WCGPAPRRCRRIQA
Trigger: TGCCTGGATCCGACGGCATCGACGCGGCGCCGGCCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCAGCCCTGACATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000490132.1
CDS CAA 90 bp GCATGTCAGGGCTGGTTTGAGGTTTTTGCAGAACAAACGGCGTCCTaGTGGTGCGGGCCGGCGCCGCCTATTGGCGACGAGGGGCACTAC +
Preference number: 6 (lower is better)
Translates to: ACQGWFEVFAEQTAS*WCGPAPPIGDEGHY
Trigger: GTAGTGCCCCTCGTCGCCAATAGGCGGCGCCGGCCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCAGCCCTGACATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495948.1
CDS GCA 72 bp TGCTCTTGCAGCATCTTCAGCGCCACATCCACGATGTaGTGGTCAGTGGCATCCCGGCCCTCCACGCCCTGT +
Preference number: 6 (lower is better)
Translates to: CSCSIFSATSTM*WSVASRPSTPC
Trigger: ACAGGGCGTGGAGGGCCGGGATGCCACTGACCAGCACATCGTGGATGTGGCGCTGAAGATGCTGCAAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS GCA 72 bp CACCCTTCTCTCCACGTTTTCCCTTGGGCCCCGTGTTaGCGATCTGACCCACGGCTCCCACGATGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: HPSLHVFPWAPC*RSDPRLPRCQE
Trigger: TTCCTGGCATCGTGGGAGCCGTGGGTCAGATCGGCAACACGGGGCCCAAGGGAAAACGTGGAGAGAAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS GCA 72 bp TTTGAGGTTTTTGCAGAACAAACGGCGTCCTTGTGGTaGGGGCCGGCGCCGCGTCGATGCCGTCGGATCCAG +
Preference number: 6 (lower is better)
Translates to: FEVFAEQTASLW*GPAPRRCRRIQ
Trigger: CTGGATCCGACGGCATCGACGCGGCGCCGGCCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000490132.1
CDS GCA 72 bp CCCTGGATCTGCCCGACTCCTTCCACTGTGCCAGTTTaGCCTTGCGCGGTCGCGGTGGGGAATAGATGGAGA +
Preference number: 6 (lower is better)
Translates to: PWICPTPSTVPV*PCAVAVGNRWR
Trigger: TCTCCATCTATTCCCCACCGCGACCGCGCAAGGGCAAACTGGCACAGTGGAAGGAGTCGGGCAGATCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490132.1
ENST00000642679.1
CDS CCA 72 bp GTTGGACACAGGAAATCCGCACTGCCTTCCAGACCCTaGATGGTTCCCGGGCGACCAGGTTTCCCAGGGGGT +
Preference number: 6 (lower is better)
Translates to: VGHRKSALPSRP*MVPGRPGFPGG
Trigger: ACCCCCTGGGAAACCTGGTCGCCCGGGAACCATCCAGGGTCTGGAAGGCAGTGCGGATTTCCTGTGTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372748.8
ENST00000417105.6
ENST00000482722.5
ENST00000488463.6
CDS CCA 72 bp CTCTCGCCTTGGTCACCCTTCTGTCCCATGATGCCCTaGGGACCAATTTCTCCTCGAGGCCCTGGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LSPWSPFCPMMP*GPISPRGPGSP
Trigger: GGGAGAGCCAGGGCCTCGAGGAGAAATTGGTCCCCAGGGCATCATGGGACAGAAGGGTGACCAAGGCGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372748.8
ENST00000466267.1
ENST00000482722.5
CDS CCA 72 bp TGGTTTGAGGTTTTTGCAGAACAAACGGCGTCCTTGTaGTGCGGGCCGGCGCCGCGTCGATGCCGTCGGATC +
Preference number: 6 (lower is better)
Translates to: WFEVFAEQTASL*CGPAPRRCRRI
Trigger: GATCCGACGGCATCGACGCGGCGCCGGCCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000490132.1
CDS CCA 72 bp TGGTTTGAGGTTTTTGCAGAACAAACGGCGTCCTTGTaGTGCGGGCCGGCGCCGCCTATTGGCGACGAGGGG +
Preference number: 6 (lower is better)
Translates to: WFEVFAEQTASL*CGPAPPIGDEG
Trigger: CCCCTCGTCGCCAATAGGCGGCGCCGGCCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495948.1
CDS CAA 72 bp GGCTGGTTTGAGGTTTTTGCAGAACAAACGGCGTCCTaGTGGTGCGGGCCGGCGCCGCCTATTGGCGACGAG +
Preference number: 6 (lower is better)
Translates to: GWFEVFAEQTAS*WCGPAPPIGDE
Trigger: CTCGTCGCCAATAGGCGGCGCCGGCCCGCACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495948.1
CDS CAA 90 bp GGCTCTGCAGATCTTGCTGCAGGCTCTCCCCAGCTCCCGCCCACCTaGCTCCCCTCTCCTCTGGCTCCTTCCTCTCCAAGCACAAACAAA +
Preference number: 6 (lower is better)
Translates to: GSADLAAGSPQLPPT*LPSPLAPSSPSTNK
Trigger: TTTGTTTGTGCTTGGAGAGGAAGGAGCCAGAGGAGAGGGGAGCAAGGTGGGCGGGAGCTGGGGAGAGCCTGCAGCAAGATCTGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461118.6
CDS GCA 72 bp ATCTGCCCGACTCCTTCCACTGTGCCAGTTTGCCCTTaGGCGGTCGCGGTGGGGAATAGATGGAGACGTGGA +
Preference number: 6 (lower is better)
Translates to: ICPTPSTVPVCP*AVAVGNRWRRG
Trigger: TCCACGTCTCCATCTATTCCCCACCGCGACCGCGCAAGGGCAAACTGGCACAGTGGAAGGAGTCGGGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642679.1
CDS CAA 72 bp CCTTCCCATGGTGGCCATTCCCTCGAAGCCTTTCTGTaGTCCCCTCCTTCCCTGGGAGTTCTGGGGATCCTG +
Preference number: 6 (lower is better)
Translates to: PSHGGHSLEAFL*SPPSLGVLGIL
Trigger: CAGGATCCCCAGAACTCCCAGGGAAGGAGGGGACAACAGAAAGGCTTCGAGGGAATGGCCACCATGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000482722.5
CDS TCA 72 bp GGCTGGCCCTGGGTCTCTGGCAGGTCCACTTATTCCTaGCACTATCACAGCAAGCTGGCTCCTTCCCATGGT +
Preference number: 6 (lower is better)
Translates to: GWPWVSGRSTYS*HYHSKLAPSHG
Trigger: ACCATGGGAAGGAGCCAGCTTGCTGTGATAGTGTCAGGAATAAGTGGACCTGCCAGAGACCCAGGGCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000482722.5
CDS TCA 72 bp GGCGGCTATAACGGGCTCCGCATGTCAGGGCTGGTTTaGGGTTTTTGCAGAACAAACGGCGTCCTTGTGGTG +
Preference number: 6 (lower is better)
Translates to: GGYNGLRMSGLV*GFCRTNGVLVV
Trigger: CACCACAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCAGCCCTGACATGCGGAGCCCGTTATAGCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000490132.1
CDS GCA 72 bp TCGAGGCCCTGGCTCTCCCCTGGGTCTCAGCTAATTTaGTTCATCAGGGAAGGTTTCCCAGACCACCTGTTC +
Preference number: 6 (lower is better)
Translates to: SRPWLSPGSQLI*FIREGFPDHLF
Trigger: GAACAGGTGGTCTGGGAAACCTTCCCTGATGAAGCAAATTAGCTGAGACCCAGGGGAGAGCCAGGGCCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466267.1
CDS CCA 72 bp CATGATGCCCTGGGGACCAATTTCTCCTCGAGGCCCTaGCTCTCCCCTGGGTCTCAGCTAATTTGCTTCATC +
Preference number: 6 (lower is better)
Translates to: HDALGTNFSSRP*LSPGSQLICFI
Trigger: GATGAAGCAAATTAGCTGAGACCCAGGGGAGAGCCAGGGCCTCGAGGAGAAATTGGTCCCCAGGGCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466267.1
CDS CCA 72 bp CTGTCGGCGGCTATAACGGGCTCCGCATGTCAGGGCTaGTTTGAGGTTTTTGCAGAACAAACGGCGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LSAAITGSACQG*FEVFAEQTASL
Trigger: CAAGGACGCCGTTTGTTCTGCAAAAACCTCAAACCAGCCCTGACATGCGGAGCCCGTTATAGCCGCCGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000490132.1
CDS CCA 72 bp CTGACACTATCACAGCAAGCTGGCTCCTTCCCATGGTaGCCATTCCCTCGAAGCCTTTCTGTTGTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: LTLSQQAGSFPW*PFPRSLSVVPS
Trigger: GGAGGGGACAACAGAAAGGCTTCGAGGGAATGGCCACCATGGGAAGGAGCCAGCTTGCTGTGATAGTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000482722.5
CDS CCA 72 bp GCAGGTCCACTTATTCCTGACACTATCACAGCAAGCTaGCTCCTTCCCATGGTGGCCATTCCCTCGAAGCCT +
Preference number: 6 (lower is better)
Translates to: AGPLIPDTITAS*LLPMVAIPSKP
Trigger: AGGCTTCGAGGGAATGGCCACCATGGGAAGGAGCCAGCTTGCTGTGATAGTGTCAGGAATAAGTGGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461118.6
ENST00000482722.5
CDS CCA 72 bp CTTCCACTGTGCCAGTTTGCCCTTGCGCGGTCGCGGTaGGGAATAGATGGAGACGTGGACAGCTCAAATAAA +
Preference number: 6 (lower is better)
Translates to: LPLCQFALARSR*GIDGDVDSSNK
Trigger: TTTATTTGAGCTGTCCACGTCTCCATCTATTCCCCACCGCGACCGCGCAAGGGCAAACTGGCACAGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642679.1
CDS CAA 90 bp CAATTTCTCCTCGAGGCCCTGGCTCTCCCCTGGGTCTCAGCTAATTaGCTTCATCAGGGAAGGTTTCCCAGACCACCTGTTCCATGGTTT +
Preference number: 6 (lower is better)
Translates to: QFLLEALALPWVSAN*LHQGRFPRPPVPWF
Trigger: AAACCATGGAACAGGTGGTCTGGGAAACCTTCCCTGATGAAGCAAATTAGCTGAGACCCAGGGGAGAGCCAGGGCCTCGAGGAGAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466267.1
CDS CCA 72 bp CAGGCCTTTTCCATATTAATATGCCACAGTCCTTCCTaGATCAGCCGTCTCATGAATACTCCATCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: QAFSILICHSPS*ISRLMNTPSAS
Trigger: AGAGGCCGATGGAGTATTCATGAGACGGCTGATCCAGGAAGGACTGTGGCATATTAATATGGAAAAGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461118.6