RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL8A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144810

Ensembl transcript IDs: ENST00000261037.7, ENST00000273342.8, ENST00000452013.5, ENST00000462604.1, ENST00000463753.5, ENST00000474648.5, ENST00000483969.5, ENST00000621757.1, ENST00000652472.1

Found 597 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTTTAAACCATTTCAATGTGGCTGTTTAGCAGAAGGAGCCCAATaGATCCATGCTGCCCACCATAGTCATCAGCCCAAAACCAGTATC +
Preference number: 1 (lower is better)
Translates to: AFKPFQCGCLAEGAQ*IHAAHHSHQPKTSI
Trigger: GATACTGGTTTTGGGCTGATGACTATGGTGGGCAGCATGGATCCATTGGGCTCCTTCTGCTAAACAGCCACATTGAAATGGTTTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR TCA 90 bp CACGCAATTCTGACGAGGACTCCTGTTACTAAAAGACACAGCCTCTaGTACAAGAGAGATATCCCTTTGACTAAAGCATTACCAGGGTCC +
Preference number: 1 (lower is better)
Translates to: HAILTRTPVTKRHSL*YKRDIPLTKALPGS
Trigger: GGACCCTGGTAATGCTTTAGTCAAAGGGATATCTCTCTTGTATCAGAGGCTGTGTCTTTTAGTAACAGGAGTCCTCGTCAGAATTGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR TCA 90 bp GCCCATACATGTACAGATAAATACAATTTTACAAATCACCTGATCTaGCTTGCTTTTAAACCATTTCAATGTGGCTGTTTAGCAGAAGGA +
Preference number: 1 (lower is better)
Translates to: AHTCTDKYNFTNHLI*LAFKPFQCGCLAEG
Trigger: TCCTTCTGCTAAACAGCCACATTGAAATGGTTTAAAAGCAAGTCAGATCAGGTGATTTGTAAAATTGTATTTATCTGTACATGTATGGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR GCA 90 bp TTAAATGGAGTATCATTTAGGTCTGAGATTAGCACCATTGTAGAATaGACAGTATTTGGCATAGATGTTGCTCCTCTTCTATCTAAAAGT +
Preference number: 1 (lower is better)
Translates to: LNGVSFRSEISTIVE*TVFGIDVAPLLSKS
Trigger: ACTTTTAGATAGAAGAGGAGCAACATCTATGCCAAATACTGTGCATTCTACAATGGTGCTAATCTCAGACCTAAATGATACTCCATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAGGGCCCCCTCCCACTaGGGCGGTAACACTACGGGT +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIRAPSH*GGNTTG
Trigger: ACCCGTAGTGTTACCGCCCCAGTGGGAGGGGGCCCT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR CAA 90 bp AGTCAGCAGCAGGCTAATAGCAGGCTCGAAATGGGTCTTTGGTGTTaGGAGACCAGATTAGAATGCCCAAAGCAGTTAGTATGTGCCCAA +
Preference number: 2 (lower is better)
Translates to: SQQQANSRLEMGLWC*ETRLECPKQLVCAQ
Trigger: TTGGGCACATACTAACTGCTTTGGGCATTCTAATCTGGTCTCCAAACACCAAAGACCCATTTCGAGCCTGCTATTAGCCTGCTGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCCAAGTGTCAGTACTTaGTACATAACTCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYPSVST*YITLSH
Trigger: ATGGGATAGAGTTATGTATCAAGTACTGACACTTGG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
3UTR-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAACAATATGAGTGAGTaGCTTTCATTAGCTATGATC +
Preference number: 2 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKNNMSE*LSLAMI
Trigger: GATCATAGCTAATGAAAGGCACTCACTCATATTGTT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
3UTR-3UTR TCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACATAAAACAGCTAATATaGTTCCAGTGGGTACAACCA +
Preference number: 2 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYIKQLI*FQWVQP
Trigger: TGGTTGTACCCACTGGAATCATATTAGCTGTTTTAT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
3UTR-3UTR TCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTTGGATTTTGAAAGCTaGCTTTGGCCGGGCACGGTG +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILDFES*LWPGTV
Trigger: CACCGTGCCCGGCCAAAGTCAGCTTTCAAAATCCAA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCACAGACACGCAATTCTaGCGAGGACTCCTGTTACTA +
Preference number: 2 (lower is better)
Translates to: LEPQITYQFAYMLNREMSTDTQF*RGLLLL
Trigger: TAGTAACAGGAGTCCTCGTCAGAATTGCGTGTCTGT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTACTTGTATTGGCCTTTaGTTTGTGCCGAGTACAGGA +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCITCIGL*FVPSTG
Trigger: TCCTGTACTCGGCACAAATCAAAGGCCAATACAAGT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATTACAGGCTGCTGTGTaGAGTATTAAACATGCATCT +
Preference number: 2 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKLQAAV*SIKHAS
Trigger: AGATGCATGTTTAATACTCCACACAGCAGCCTGTAA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
3UTR CAA 90 bp AAAACAGCTAATATGATTCCAGTGGGTACAACCAAGTGTCAGTACTaGATACATAACTCTATCCCATCATTCGCAATTACAGGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: KTANMIPVGTTKCQY*IHNSIPSFAITGCC
Trigger: ACAGCAGCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGTTGTACCCACTGGAATCATATTAGCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
3UTR-3UTR TCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGTACAGAGAAGGCACTaGATAAATTCACAAAGGCCG +
Preference number: 2 (lower is better)
Translates to: LEPQITYQFAYMLNREMSVQRRH*INSQRP
Trigger: CGGCCTTTGTGAATTTATTCAGTGCCTTCTCTGTAC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGGTTCTCTAGCTCCTTaGGGGTTACTGTCTAATGCT +
Preference number: 2 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNGSLAP*GLLSNA
Trigger: AGCATTAGACAGTAACCCTCAAGGAGCTAGAGAACC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCTCGAAATGGGTCTTTaGTGTTTGGAGACCAGATTA +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILEMGL*CLETRL
Trigger: TAATCTGGTCTCCAAACACCAAAGACCCATTTCGAG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCCAAGTGTCAGTACTTaGTACATAACTCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIPSVST*YITLSH
Trigger: ATGGGATAGAGTTATGTATCAAGTACTGACACTTGG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAAAAGACACAGCCTCTaGTACAAGAGAGATATCCCT +
Preference number: 2 (lower is better)
Translates to: LEPQITYQFAYMLNREMSKRHSL*YKRDIP
Trigger: AGGGATATCTCTCTTGTATCAGAGGCTGTGTCTTTT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCACTCTGGGGAACAAGTaGGTTAATTACTGCTCATGT +
Preference number: 2 (lower is better)
Translates to: LEPQITYQFAYMLNREMSTLGNK*VNYCSC
Trigger: ACATGAGCAGTAATTAACTCACTTGTTCCCCAGAGT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTTACAGGCTGCTGTGTaGAGTATTAAACATGCATCT +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILQAAV*SIKHAS
Trigger: AGATGCATGTTTAATACTCCACACAGCAGCCTGTAA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTTTTCAGACTTGTATTaGCCTTTGATTTGTGCCGAG +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIFSDLY*PLICAE
Trigger: CTCGGCACAAATCAAAGGCCAATACAAGTCTGAAAA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACATAGCAGGCTCGAAATaGGTCTTTGGTGTTTGGAGA +
Preference number: 2 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNIAGSK*VFGVWR
Trigger: TCTCCAAACACCAAAGACCCATTTCGAGCCTGCTAT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAACCCAAAGTATATTTaGCCACATAGATGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCINPKYI*PHRCCL
Trigger: CAGACAGCATCTATGTGGCCAAATATACTTTGGGTT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCCAAGTGTCAGTACTTaGTACATAACTCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: LEPQITYQFAYMLNREMSPSVST*YITLSH
Trigger: ATGGGATAGAGTTATGTATCAAGTACTGACACTTGG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAGAGAGATATCCCTTTaGCTAAAGCATTACCAGGGT +
Preference number: 2 (lower is better)
Translates to: LTLEPQITYQFAYMLNREREISL*LKHYQG
Trigger: ACCCTGGTAATGCTTTAGTCAAAGGGATATCTCTCT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAACTCTGGGGAACAAGTaGGTTAATTACTGCTCATGT +
Preference number: 2 (lower is better)
Translates to: LTLEPQITYQFAYMLNRETLGNK*VNYCSC
Trigger: ACATGAGCAGTAATTAACTCACTTGTTCCCCAGAGT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTTACAGGCTGCTGTGTaGAGTATTAAACATGCATCT +
Preference number: 2 (lower is better)
Translates to: LEPQITYQFAYMLNREMSLQAAV*SIKHAS
Trigger: AGATGCATGTTTAATACTCCACACAGCAGCCTGTAA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCATAAAACAGCTAATATaGTTCCAGTGGGTACAACCA +
Preference number: 2 (lower is better)
Translates to: LEPQITYQFAYMLNREMSIKQLI*FQWVQP
Trigger: TGGTTGTACCCACTGGAATCATATTAGCTGTTTTAT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACTTACTGATATCTCCATaGTTAGAACCACACTGTGGT +
Preference number: 2 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNLLISP*LEPHCG
Trigger: ACCACAGTGTGGTTCTAATCATGGAGATATCAGTAA...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR GCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAACAATATGAGTGAGTaGCTTTCATTAGCTATGATC +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCINNMSE*LSLAMI
Trigger: GATCATAGCTAATGAAAGGCACTCACTCATATTGTT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACTTCACAAAGGCCGATTaGTTCACCCATTCTTTTAGA +
Preference number: 2 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNFTKAD*FTHSFR
Trigger: TCTAAAAGAATGGGTGAACCAATCGGCCTTTGTGAA...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTCACCAATTATGGCTTaGATTTTGAAAGCTGACTTT +
Preference number: 2 (lower is better)
Translates to: NLSWELKQVTSLFTVHCISPIMA*ILKADF
Trigger: AAAGTCAGCTTTCAAAATCCAAGCCATAATTGGTGA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACTTCTCTCTTTCTTGGTaGGAATTAAAAGCCCATACA +
Preference number: 2 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNFSLSW*ELKAHT
Trigger: TGTATGGGCTTTTAATTCCCACCAAGAAAGAGAGAA...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR GCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAACAATATGAGTGAGTaGCTTTCATTAGCTATGATC +
Preference number: 2 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNNNMSE*LSLAMI
Trigger: GATCATAGCTAATGAAAGGCACTCACTCATATTGTT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR CCA 72 bp CAGCAGCAGGCTAATAGCAGGCTCGAAATGGGTCTTTaGTGTTTGGAGACCAGATTAGAATGCCCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: QQQANSRLEMGL*CLETRLECPKQ
Trigger: CTGCTTTGGGCATTCTAATCTGGTCTCCAAACACCAAAGACCCATTTCGAGCCTGCTATTAGCCTGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR CCA 72 bp ACAGAGAAGGCACTGAATAAATTCACAAAGGCCGATTaGTTCACCCATTCTTTTAGAGACAACAGACACGCA +
Preference number: 3 (lower is better)
Translates to: TEKALNKFTKAD*FTHSFRDNRHA
Trigger: TGCGTGTCTGTTGTCTCTAAAAGAATGGGTGAACCAATCGGCCTTTGTGAATTTATTCAGTGCCTTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR GCA 72 bp TTTCTGCTTTTCAGACTTGTATTGGCCTTTGATTTGTaGCGAGTACAGGATGACATTAAAAACACAGGCTCT +
Preference number: 3 (lower is better)
Translates to: FLLFRLVLAFDL*RVQDDIKNTGS
Trigger: AGAGCCTGTGTTTTTAATGTCATCCTGTACTCGGCACAAATCAAAGGCCAATACAAGTCTGAAAAGCAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACATGGGTCTTTGGTGTTaGGAGACCAGATTAGAATGC +
Preference number: 3 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNMGLWC*ETRLEC
Trigger: GCATTCTAATCTGGTCTCCAAACACCAAAGACCCAT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR GCA 72 bp GTATCATTTAGGTCTGAGATTAGCACCATTGTAGAATaGACAGTATTTGGCATAGATGTTGCTCCTCTTCTA +
Preference number: 3 (lower is better)
Translates to: VSFRSEISTIVE*TVFGIDVAPLL
Trigger: TAGAAGAGGAGCAACATCTATGCCAAATACTGTGCATTCTACAATGGTGCTAATCTCAGACCTAAATGATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCACCAAGTGTCAGTACTaGATACATAACTCTATCCCA +
Preference number: 3 (lower is better)
Translates to: LEPQITYQFAYMLNREMSTKCQY*IHNSIP
Trigger: TGGGATAGAGTTATGTATCAAGTACTGACACTTGGT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAAGAGAGATATCCCTTaGACTAAAGCATTACCAGGG +
Preference number: 3 (lower is better)
Translates to: LTLEPQITYQFAYMLNREKRDIP*TKALPG
Trigger: CCCTGGTAATGCTTTAGTCAAAGGGATATCTCTCTT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAAACACAGGCTCTTGTaGCCCTTTGACATTCTACAT +
Preference number: 3 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNKHRLL*PFDILH
Trigger: ATGTAGAATGTCAAAGGGCAACAAGAGCCTGTGTTT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTTCTGCTTTTCAGACTaGTATTGGCCTTTGATTTGT +
Preference number: 3 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIFCFSD*YWPLIC
Trigger: ACAAATCAAAGGCCAATACAAGTCTGAAAAGCAGAA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGGGCCGGGAGGGCCGTaGATCCCTGGAGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKGPGGP*IPGGPF
Trigger: AAAGGGGCCTCCAGGGATGCACGGCCCTCCCGGCCC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGACCAGGGGGCCCAGGTaGTCCTCTTGGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKTRGPR*SSWARL
Trigger: GAGCCTGGCCCAAGAGGACCACCTGGGCCCCCTGGT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTTCCCAGGGGGCCCTaGGGCCCAGGGAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKFPRGP*GPGKPV
Trigger: GACAGGCTTCCCTGGGCCCCAGGGCCCCCTGGGAAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCGGGCGGGCAGCCTCTaGAGGAGCTGGACACTCTTC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKRAGSL*RSWTLF
Trigger: GAAGAGTGTCCAGCTCCTCCAGAGGCTGCCCGCCCG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCTCACCCTTGGGACCTaGTGGCCCCTGTGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKLTLGT*WPLWPY
Trigger: GTAGGGCCACAGGGGCCACCAGGTCCCAAGGGTGAG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGGCACCAGGCTTCCCTaGGGGGCCATGAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKGTRLP*GAMKSC
Trigger: GCAGGACTTCATGGCCCCCCAGGGAAGCCTGGTGCC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACCAGGGGGCCCAGGTaGTCCTCTTGGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYTRGPR*SSWARL
Trigger: GAGCCTGGCCCAAGAGGACCACCTGGGCCCCCTGGT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAGGGCCGTGCATCCCTaGAGGCCCCTTTACACCTGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKRAVHP*RPLYTW
Trigger: CCAGGTGTAAAGGGGCCTCCAGGGATGCACGGCCCT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCAGGCCTGGCTCTCCTaGAGGACCCCCTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKQAWLS*RTPYSW
Trigger: CCAGGAATAGGGGGTCCTCCAGGAGAGCCAGGCCTG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAGGGCCCATAGGACCTaGGATTCCAGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKRAHRT*DSRQAW
Trigger: CCAGGCCTGCCTGGAATCCCAGGTCCTATGGGCCCT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGGGCCCTATGGGACCTaGCAAACCCCTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKGPYGT*QTPHAR
Trigger: CCTGGCATGAGGGGTTTGCCAGGTCCCATAGGGCCC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCCCCCTTGGGCCCTATaGGACCTGGCAAACCCCTCA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKPPWAL*DLANPS
Trigger: TGAGGGGTTTGCCAGGTCCCATAGGGCCCAAGGGGG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGGCCCGGCTCCCCTTTaGGGCCTGGAATCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYGPAPL*GLESQV
Trigger: CACCTGGGATTCCAGGCCCCAAAGGGGAGCCGGGCC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGAGGTGGCAGCGGCTTaGTCCCATAGTAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKEVAAA*SHSRHQ
Trigger: CTGGTGCCTACTATGGGATCAAGCCGCTGCCACCTC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCAGGAACACCTCCCATaGCCCGGTCACCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKQEHLP*PGHLWV
Trigger: GACCCAAAGGTGACCGGGGCATGGGAGGTGTTCCTG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCCTGAGCAGCAGCACTaGACTCCCAGATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKPEQQH*TPRCLV
Trigger: GACCAGGCATCTGGGAGTGCAGTGCTGCTGCTCAGG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCATGCCCATGGCTCCTaGCTTCCCTGGCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKHAHGS*LPWHSR
Trigger: CCTGGAATGCCAGGGAAGCCAGGAGCCATGGGCATG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAGGCCCCTTTACACCTaGCGCACCTGGCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKRPLYT*RTWHPE
Trigger: TTCGGGATGCCAGGTGCGCCAGGTGTAAAGGGGCCT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCCTGGAAATCCTGGCTaGCCTGGGATCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKPGNPG*PGIPSW
Trigger: CCAGGATGGGATCCCAGGCCAGCCAGGATTTCCAGG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGACCTGGTGGCCCCTGTaGCCCTACAATCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKTWWPL*PYNPTF
Trigger: GAAGGTGGGATTGTAGGGCCACAGGGGCCACCAGGT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGACCCTTGGGACCTGGTaGCCCCTGTGGCCCTACAAT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKTLGTW*PLWPYN
Trigger: ATTGTAGGGCCACAGGGGCCACCAGGTCCCAAGGGT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCTCACCCTTGGGACCTaGTGGCCCCTGTGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYLTLGT*WPLWPY
Trigger: GTAGGGCCACAGGGGCCACCAGGTCCCAAGGGTGAG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGAAGCCTTGAAGCCCTaGCTCACCCTTGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKEALKP*LTLGTW
Trigger: CCAGGTCCCAAGGGTGAGCCAGGGCTTCAAGGCTTC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGCCCAGCTTCCCCCTTaGGCCCTATGGGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYAQLPP*ALWDLA
Trigger: TGCCAGGTCCCATAGGGCCCAAGGGGGAAGCTGGGC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGCCTGGAATCCCAGGTaGTCCAATGGGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKAWNPR*SNGATR
Trigger: CCTAGTGGCCCCATTGGACCACCTGGGATTCCAGGC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGATCCCAGGAGGTCCTTaGACCCCCGGTACCCCAATA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKIPGGP*TPGTPI
Trigger: TATTGGGGTACCGGGGGTTCAAGGACCTCCTGGGAT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTTCCTGGGAAGCCTTaGAGCCCTGGCTCACCCTTG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKFPGKP*SPGSPL
Trigger: CAAGGGTGAGCCAGGGCTTCAAGGCTTCCCAGGAAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTCCTGCAGCCTGTTCTaGGGGCATCTGGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKSCSLF*GHLEEH
Trigger: GTGTTCCTCCAGATGCCCTCAGAACAGGCTGCAGGA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAGCACTCCCAGCAGCTaGAGAGGGCCAGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYSTPSS*RGPGST
Trigger: TGTGCTGCCTGGCCCTCTGCAGCTGCTGGGAGTGCT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTGGGTACGGCTTCCTTaGCCATTCTTGGCGCCGGTT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKWVRLP*PFLAPV
Trigger: AACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGGGGCCATGAAGTCCTaGCACTCCGGGTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKGAMKS*HSGFPY
Trigger: ATAGGGAAACCCGGAGTGGCAGGACTTCATGGCCCC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGAGCAACCCACACGTTaGCCCCCTTGCAGTGAACGT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKEQPTR*PPCSER
Trigger: ACGTTCACTGCAAGGGGGGCAACGTGTGGGTTGCTC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCACTGCACTCCCAGATaGCTGGTCCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKHCTPR*LVQEAL
Trigger: AAGGGCTTCCTGGACCAGGCATCTGGGAGTGCAGTG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGCTCCTCATAGTAGGTaGGCAGGGAAGGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYAPHSR*AGKERR
Trigger: CCGCCGCTCCTTCCCTGCCCACCTACTATGAGGAGC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAGGGCCGTGCATCCCTaGAGGCCCCTTTACACCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYRAVHP*RPLYTW
Trigger: CCAGGTGTAAAGGGGCCTCCAGGGATGCACGGCCCT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTGGTTTGCCCACTCCTaGCAGTCCAACAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYWFAHS*QSNRAG
Trigger: CCCGGCCCTGTTGGACTGCCAGGAGTGGGCAAACCA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGGGTCCTGGGAAGCCTaGTTTCCCAATCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKGSWEA*FPNPWK
Trigger: CTTCCAGGGATTGGGAAACCAGGCTTCCCAGGACCC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCAGGCCTGGCTCTCCTaGAGGACCCCCTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYQAWLS*RTPYSW
Trigger: CCAGGAATAGGGGGTCCTCCAGGAGAGCCAGGCCTG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGGGCCCTATGGGACCTaGCAAACCCCTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYGPYGT*QTPHAR
Trigger: CCTGGCATGAGGGGTTTGCCAGGTCCCATAGGGCCC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCCCCCTTGGGCCCTATaGGACCTGGCAAACCCCTCA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYPPWAL*DLANPS
Trigger: TGAGGGGTTTGCCAGGTCCCATAGGGCCCAAGGGGG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGGCAGATACTCTCCCTaGGGTGGTGGTGTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYGRYSP*GGGVGG
Trigger: GCCCCCTACACCACCACCCCAGGGAGAGTATCTGCC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTGTTCTGAGGGCATCTaGAGGAACACCCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKCSEGI*RNTRSP
Trigger: CGGAGACCGGGTGTTCCTCCAGATGCCCTCAGAACA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCAGGGACCTCACAGGTaGAGATGCCTGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYQGPHR*RCLSAG
Trigger: ACCCGCAGACAGGCATCTTCACCTGTGAGGTCCCTG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCTTTTGCCCCAGGCATaGCCATGGCTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYLLPQA*PWLLAS
Trigger: GGAAGCCAGGAGCCATGGGCATGCCTGGGGCAAAAG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCTGTCACTCCTGGTTTaGCCACTCCTGGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKLSLLV*PLLAVQ
Trigger: TTGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCAGGAACACCTCCCATaGCCCGGTCACCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYQEHLP*PGHLWV
Trigger: GACCCAAAGGTGACCGGGGCATGGGAGGTGTTCCTG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAGGTATCCCATGACCTaGCAAACCAGGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYRYPMT*QTRGPR
Trigger: CCTGGGCCCCCTGGTTTGCCAGGTCATGGGATACCT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCATGCCCATGGCTCCTaGCTTCCCTGGCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYHAHGS*LPWHSR
Trigger: CCTGGAATGCCAGGGAAGCCAGGAGCCATGGGCATG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAGGTCCTTGTGGTCCTaGGATCCCCATAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKRSLWS*DPHRPN
Trigger: ATTGGGCCTATGGGGATCCCAGGACCACAAGGACCT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCCCTGGAGGTCCTTGTaGTCCTGGGATCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYPWRSL*SWDPHR
Trigger: CCTATGGGGATCCCAGGACCACAAGGACCTCCAGGG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAAATCCTGGCTGGCCTaGGATCCCATCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYKSWLA*DPILAW
Trigger: CCAGGCCAGGATGGGATCCCAGGCCAGCCAGGATTT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCCTGGAAATCCTGGCTaGCCTGGGATCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYPGNPG*PGIPSW
Trigger: CCAGGATGGGATCCCAGGCCAGCCAGGATTTCCAGG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCTCCCCTTTGCCACCTaGAAATCCTGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYLPFAT*KSWLAW
Trigger: CCAGGCCAGCCAGGATTTCCAGGTGGCAAAGGGGAG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTGGTTTCCCAATCCCTaGAAGGCCTGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYWFPNP*KAWGSW
Trigger: CCAGGACCCCCAGGCCTTCCAGGGATTGGGAAACCA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGCCTGGAATCCCAGGTaGTCCAATGGGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYAWNPR*SNGATR
Trigger: CCTAGTGGCCCCATTGGACCACCTGGGATTCCAGGC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCGGGCTCGTTGTTCTTaGATAGAGCAACCCACACGT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKRARCS*IEQPTR
Trigger: ACGTGTGGGTTGCTCTATTCAAGAACAACGAGCCCG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGGCAGGTGCATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYGRCIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATGCACCTGCC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCAATGTCCTTGCTGGTaGCTTCCTGTGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKQCPCW*LPVTPL
Trigger: CAGAGGTGTCACAGGAAGGCACCAGCAAGGACATTG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGGGCCGGGAGGGCCGTaGATCCCTGGAGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGGPGGP*IPGGPF
Trigger: AAAGGGGCCTCCAGGGATGCACGGCCCTCCCGGCCC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCTGGCAAACCCCTCATaGCAGGAGGCCCTACTTCAC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYLANPS*QEALLH
Trigger: GTGAAGTAGGGCCTCCTGGCATGAGGGGTTTGCCAG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGGGGCCATGAAGTCCTaGCACTCCGGGTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYGAMKS*HSGFPY
Trigger: ATAGGGAAACCCGGAGTGGCAGGACTTCATGGCCCC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGAGCAACCCACACGTTaGCCCCCTTGCAGTGAACGT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYEQPTR*PPCSER
Trigger: ACGTTCACTGCAAGGGGGGCAACGTGTGGGTTGCTC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAGTAAGCCAAGATCGTaGTACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKSKPRS*YCTPAW
Trigger: CCAGGCTGGAGTGCAGTAGCACGATCTTGGCTTACT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACCCAGGTGGTCCTCTTaGGCCAGGCTCTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKPRWSS*ARLSTG
Trigger: CCCCGTGGAGAGCCTGGCCCAAGAGGACCACCTGGG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATTTCCCAGGGGGCCCTaGGGCCCAGGGAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKFPRGP*GPGKPV
Trigger: GACAGGCTTCCCTGGGCCCCAGGGCCCCCTGGGAAA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAGGACCCCCTATTCCTaGGGCACCTATTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKRTPYS*GTYWSF
Trigger: AAAGGACCAATAGGTGCCCCAGGAATAGGGGGTCCT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAACACCAGGGAGTCCTaGTACACCTTTTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKNTRES*YTFLPS
Trigger: GCTGGGCAAAAAGGTGTACCAGGACTCCCTGGTGTT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGGCCCGGCTCCCCTTTaGGGCCTGGAATCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKGPAPL*GLESQV
Trigger: CACCTGGGATTCCAGGCCCCAAAGGGGAGCCGGGCC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACATACTCTCCCTGGGGTaGTGGTGTAGGGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYILSLG*WCRGHH
Trigger: GTGATGCCCCCTACACCACCACCCCAGGGAGAGTAT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTTGTTAAACTTCACTaGGGCCCCCACCGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKFVKLH*GPHRWE
Trigger: TTCCCACCGGTGGGGGCCCCAGTGAAGTTTAACAAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCCTGAAAAGGAGGAGTaGACATACTGCCCGGCATAC +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKPEKEE*TYCPAY
Trigger: GTATGCCGGGCAGTATGTCCACTCCTCCTTTTCAGG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGGCCAGGCTGGCCTTaGGGACCAAGGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGRPGWP*GPRAPG
Trigger: GCCTGGTGCCCTTGGTCCTCAAGGCCAGCCTGGCCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGAGGAGTGGACATACTaGCCGGCATACAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYEEWTY*PAYSPA
Trigger: TGCAGGACTGTATGCCGGGCAGTATGTCCACTCCTC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCAGCAGATGCTGCTCTaGCTTCACAACAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKQQMLL*LHNSFL
Trigger: CAAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCTGGTAACATGCACTTaGCTTTTATGGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKLVTCT*LLWAGG
Trigger: CCCACCTGCCCATAAAAGCCAAGTGCATGTTACCAG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAGGAGGAATTTGAGGTaGCAGCGGCTTGATCCCATA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKRRNLR*QRLDPI
Trigger: TATGGGATCAAGCCGCTGCCACCTCAAATTCCTCCT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCAGGGGCTGGTATTGTaGAATTTGTGGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKQGLVL*NLWWHL
Trigger: CAGATGCCACCACAAATTCCACAATACCAGCCCCTG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCCCAGGTGGTCCTCTTaGGCCAGGCTCTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGPRWSS*ARLSTG
Trigger: CCCCGTGGAGAGCCTGGCCCAAGAGGACCACCTGGG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTCCTGGGGCACCTATTaGTCCTTTCTCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYSWGTY*SFLPSW
Trigger: CCAAGAGGGGAGAAAGGACCAATAGGTGCCCCAGGA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGAAACCTGGCTTTCCTaGGAAGCCTTGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYETWLS*EALKPW
Trigger: CCAGGGCTTCAAGGCTTCCCAGGAAAGCCAGGTTTC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAAGGGGGCATCACAGCTaGGGGTCCTGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKRGHHS*GSWRSW
Trigger: CCAGGACCTCCAGGACCCCCAGCTGTGATGCCCCCT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAGGCCAGGCTGGCCTTaGGGACCAAGGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIRPGWP*GPRAPG
Trigger: GCCTGGTGCCCTTGGTCCTCAAGGCCAGCCTGGCCT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTATGGCTTGGATTTTaGAAGCTGACTTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKLWLGF*KLTLAG
Trigger: CCCGGCCAAAGTCAGCTTTCAAAATCCAAGCCATAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAAAGACCAATGTCCTTaGTGGTGCCTTCCTGTGACA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKKDQCP*WCLPVT
Trigger: TGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAGTAAGCCAAGATCGTaGTACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYSKPRS*YCTPAW
Trigger: CCAGGCTGGAGTGCAGTAGCACGATCTTGGCTTACT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGGGAGAGAGGCTCGCTaGCTCCCACGGAGAGGATCG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGGREAR*LPRRGS
Trigger: CGATCCTCTCCGTGGGAGCCAGCGAGCCTCTCTCCC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGACCAATGTCCTTGCTaGTGCCTTCCTGTGACACCT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYDQCPC*CLPVTP
Trigger: AGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTTGCCATACTGCAAGTaGGGCATCTCCTTGCCCATG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYLPYCK*GISLPM
Trigger: CATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGTCCTGGTAGTCCTTTaGGTCCTCGATCACCCTTTG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYVLVVL*VLDHPL
Trigger: CAAAGGGTGATCGAGGACCCAAAGGACTACCAGGAC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTTTCCCAGGGGGCCCTaGGGCCCAGGGAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIFPRGP*GPGKPV
Trigger: GACAGGCTTCCCTGGGCCCCAGGGCCCCCTGGGAAA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAGGACCCCCTATTCCTaGGGCACCTATTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYRTPYS*GTYWSF
Trigger: AAAGGACCAATAGGTGCCCCAGGAATAGGGGGTCCT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACAGGCCTGGCTCTCCTaGAGGACCCCCTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKQAWLS*RTPYSW
Trigger: CCAGGAATAGGGGGTCCTCCAGGAGAGCCAGGCCTG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAAGGGCCCATAGGACCTaGGATTCCAGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKRAHRT*DSRQAW
Trigger: CCAGGCCTGCCTGGAATCCCAGGTCCTATGGGCCCT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAAAACCAATAGCACCTaGAGGGCCCATAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYKTNST*RAHRTW
Trigger: CCAGGTCCTATGGGCCCTCCAGGTGCTATTGGTTTT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCTCACCCTTGGGACCTaGTGGCCCCTGTGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGLTLGT*WPLWPY
Trigger: GTAGGGCCACAGGGGCCACCAGGTCCCAAGGGTGAG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGGGCCCTATGGGACCTaGCAAACCCCTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKGPYGT*QTPHAR
Trigger: CCTGGCATGAGGGGTTTGCCAGGTCCCATAGGGCCC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACCCCCTTGGGCCCTATaGGACCTGGCAAACCCCTCA +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKPPWAL*DLANPS
Trigger: TGAGGGGTTTGCCAGGTCCCATAGGGCCCAAGGGGG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGCCCAGCTTCCCCCTTaGGCCCTATGGGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGAQLPP*ALWDLA
Trigger: TGCCAGGTCCCATAGGGCCCAAGGGGGAAGCTGGGC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGGGGGCATCACAGCTaGGGGTCCTGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGRGHHS*GSWRSW
Trigger: CCAGGACCTCCAGGACCCCCAGCTGTGATGCCCCCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACTCTCCCTGGGGTGGTaGTGTAGGGGGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKLSLGW*CRGHHS
Trigger: GCTGTGATGCCCCCTACACCACCACCCCAGGGAGAG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGGCAGATACTCTCCCTaGGGTGGTGGTGTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKGRYSP*GGGVGG
Trigger: GCCCCCTACACCACCACCCCAGGGAGAGTATCTGCC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTTTGTTAAACTTCACTaGGGCCCCCACCGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYFVKLH*GPHRWE
Trigger: TTCCCACCGGTGGGGGCCCCAGTGAAGTTTAACAAA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGGGCCCCCTCCCACTaGGGCGGTAACACTACGGGT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGRAPSH*GGNTTG
Trigger: ACCCGTAGTGTTACCGCCCCAGTGGGAGGGGGCCCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGCTGGTGCCTTCCTGTaGCACCTCTGGGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKAGAFL*HLWGWF
Trigger: AAACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGAGGTGGCAGCGGCTTaGTCCCATAGTAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKEVAAA*SHSRHQ
Trigger: CTGGTGCCTACTATGGGATCAAGCCGCTGCCACCTC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGGACCCCGAAGGCCTTaGGGTCCTGGTAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKGPRRP*GPGSPL
Trigger: CAAAGGACTACCAGGACCTCAAGGCCTTCGGGGTCC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACAGGGACCTCACAGGTaGAGATGCCTGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKQGPHR*RCLSAG
Trigger: ACCCGCAGACAGGCATCTTCACCTGTGAGGTCCCTG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCTCTTCAGCAGATGCTaGTCTGCCTTCACAACAGCT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYLFSRC*SAFTTA
Trigger: AGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGCACTCCCAGCAGCTaGAGAGGGCCAGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGSTPSS*RGPGST
Trigger: TGTGCTGCCTGGCCCTCTGCAGCTGCTGGGAGTGCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGGGCCGGGAGGGCCGTaGATCCCTGGAGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNGPGGP*IPGGPF
Trigger: AAAGGGGCCTCCAGGGATGCACGGCCCTCCCGGCCC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCAGGGGCTGGTATTGTaGAATTTGTGGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYQGLVL*NLWWHL
Trigger: CAGATGCCACCACAAATTCCACAATACCAGCCCCTG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCACCAGGGGGCCCAGGTaGTCCTCTTGGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSTRGPR*SSWARL
Trigger: GAGCCTGGCCCAAGAGGACCACCTGGGCCCCCTGGT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGATATCCCTGTGGCCCTaGTTTTCCTTTAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKISLWP*FSFNSR
Trigger: CCTGGAATTAAAGGAAAACCAGGGCCACAGGGATAT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATACACCTGGCGCACCTaGCATCCCGAAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKYTWRT*HPEALV
Trigger: GACAAGGGCTTCGGGATGCCAGGTGCGCCAGGTGTA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACTCCCCTTTGCCACCTaGAAATCCTGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKLPFAT*KSWLAW
Trigger: CCAGGCCAGCCAGGATTTCCAGGTGGCAAAGGGGAG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATGGTTTCCCAATCCCTaGAAGGCCTGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKWFPNP*KAWGSW
Trigger: CCAGGACCCCCAGGCCTTCCAGGGATTGGGAAACCA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATGCCCCGGTCACCTTTaGGTCCTGGGAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKCPGHL*VLGSLV
Trigger: AACCAGGCTTCCCAGGACCCAAAGGTGACCGGGGCA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAACCCTTGGGACCTGGTaGCCCCTGTGGCCCTACAAT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKTLGTW*PLWPYN
Trigger: ATTGTAGGGCCACAGGGGCCACCAGGTCCCAAGGGT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGAAGCCTTGAAGCCCTaGCTCACCCTTGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKEALKP*LTLGTW
Trigger: CCAGGTCCCAAGGGTGAGCCAGGGCTTCAAGGCTTC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGGCCCGGCTCCCCTTTaGGGCCTGGAATCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSGPAPL*GLESQV
Trigger: CACCTGGGATTCCAGGCCCCAAAGGGGAGCCGGGCC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCTCTCCCTGGGGTGGTaGTGTAGGGGGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGLSLGW*CRGHHS
Trigger: GCTGTGATGCCCCCTACACCACCACCCCAGGGAGAG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGATAGCAGGCTCGAAATaGGTCTTTGGTGTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKIAGSK*VFGVWR
Trigger: TCTCCAAACACCAAAGACCCATTTCGAGCCTGCTAT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAATTCCAGGTATCCCATaGCCTGGCAAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKIPGIP*PGKPGG
Trigger: GCCCCCTGGTTTGCCAGGTCATGGGATACCTGGAAT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGGACCCCGAAGGCCTTaGGGTCCTGGTAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGGPRRP*GPGSPL
Trigger: CAAAGGACTACCAGGACCTCAAGGCCTTCGGGGTCC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAGGCCAGGCTGGCCTTaGGGACCAAGGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNRPGWP*GPRAPG
Trigger: GCCTGGTGCCCTTGGTCCTCAAGGCCAGCCTGGCCT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATCCTGCAGCCTGTTCTaGGGGCATCTGGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKSCSLF*GHLEEH
Trigger: GTGTTCCTCCAGATGCCCTCAGAACAGGCTGCAGGA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAAAAGACACAGCCTCTaGTACAAGAGAGATATCCCT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKKRHSL*YKRDIP
Trigger: AGGGATATCTCTCTTGTATCAGAGGCTGTGTCTTTT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGGTTCTCTAGCTCCTTaGGGGTTACTGTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYGSLAP*GLLSNA
Trigger: AGCATTAGACAGTAACCCTCAAGGAGCTAGAGAACC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCAGCAGATGCTGCTCTaGCTTCACAACAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYQQMLL*LHNSFF
Trigger: AAAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTGTCTCTTCAGCAGATaGTGCTCTGCCTTCACAACA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYCLFSR*CSAFTT
Trigger: TGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTACTCTTTGCCATACTaGAAGTGGGGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYYSLPY*KWGISL
Trigger: CAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCTTTTGCCCCAGGCATaGCCATGGCTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGLLPQA*PWLLAS
Trigger: GGAAGCCAGGAGCCATGGGCATGCCTGGGGCAAAAG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACACCTGGCTTCCCAATaGCAGGAAGTCCATGAGGCC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKHLASQ*QEVHEA
Trigger: GGCCTCATGGACTTCCTGGCATTGGGAAGCCAGGTG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCAGGAACACCTCCCATaGCCCGGTCACCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGQEHLP*PGHLWV
Trigger: GACCCAAAGGTGACCGGGGCATGGGAGGTGTTCCTG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACCTGGTACACCTTTTTaGCCAGCTTCCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKPGTPF*PASPLG
Trigger: GCCCAAGGGGGAAGCTGGGCAAAAAGGTGTACCAGG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGCAGTGAACGTGGTATaGAAAGTAGTAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYAVNVV*KVVDTR
Trigger: CCTGGTGTCTACTACTTTGCATACCACGTTCACTGC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGAGCAACCCACACGTTaGCCCCCTTGCAGTGAACGT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKEQPTR*PPCSER
Trigger: ACGTTCACTGCAAGGGGGGCAACGTGTGGGTTGCTC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCCTGAGCAGCAGCACTaGACTCCCAGATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGPEQQH*TPRCLV
Trigger: GACCAGGCATCTGGGAGTGCAGTGCTGCTGCTCAGG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTTCCTTGCCCATTCTTaGCGCCGGTTGAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYFLAHS*RRLNFL
Trigger: AAGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTTTCTTTGCCTTTCTTaGGTACGGCTTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYFLCLS*VRLPCP
Trigger: TGGGCAAGGAAGCCGTACCCAAGAAAGGCAAAGAAA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAACCCAGGTGGTCCTCTTaGGCCAGGCTCTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREPRWSS*ARLSTG
Trigger: CCCCGTGGAGAGCCTGGCCCAAGAGGACCACCTGGG...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGGTATCCCATGACCTaGCAAACCAGGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGRYPMT*QTRGPR
Trigger: CCTGGGCCCCCTGGTTTGCCAGGTCATGGGATACCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCCCTGGAGGTCCTTGTaGTCCTGGGATCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGPWRSL*SWDPHR
Trigger: CCTATGGGGATCCCAGGACCACAAGGACCTCCAGGG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGGCCCCTTTACACCTaGCGCACCTGGCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGRPLYT*RTWHPE
Trigger: TTCGGGATGCCAGGTGCGCCAGGTGTAAAGGGGCCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAGGGCCGTGCATCCCTaGAGGCCCCTTTACACCTGG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIRAVHP*RPLYTW
Trigger: CCAGGTGTAAAGGGGCCTCCAGGGATGCACGGCCCT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGAAGCCTGTCACTCCTaGTTTGCCCACTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKEACHS*FAHSWQ
Trigger: CTGCCAGGAGTGGGCAAACCAGGAGTGACAGGCTTC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAAATCCTGGCTGGCCTaGGATCCCATCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGKSWLA*DPILAW
Trigger: CCAGGCCAGGATGGGATCCCAGGCCAGCCAGGATTT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCTGCCCCGGTCACCTTTaGGTCCTGGGAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGCPGHL*VLGSLV
Trigger: AACCAGGCTTCCCAGGACCCAAAGGTGACCGGGGCA...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGGCACCAGGCTTCCCTaGGGGGCCATGAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSGTRLP*GAMKSC
Trigger: GCAGGACTTCATGGCCCCCCAGGGAAGCCTGGTGCC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAGGGGGCATCACAGCTaGGGGTCCTGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSRGHHS*GSWRSW
Trigger: CCAGGACCTCCAGGACCCCCAGCTGTGATGCCCCCT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAATACTCTCCCTGGGGTaGTGGTGTAGGGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKILSLG*WCRGHH
Trigger: GTGATGCCCCCTACACCACCACCCCAGGGAGAGTAT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATCCCAGCCCCATATCTaGCAGATACTCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKSQPHI*QILSLG
Trigger: CCCCAGGGAGAGTATCTGCCAGATATGGGGCTGGGA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATGTTCTGAGGGCATCTaGAGGAACACCCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKCSEGI*RNTRSP
Trigger: CGGAGACCGGGTGTTCCTCCAGATGCCCTCAGAACA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAGGGCCCCCTCCCACTaGGGCGGTAACACTACGGGT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSRAPSH*GGNTTG
Trigger: ACCCGTAGTGTTACCGCCCCAGTGGGAGGGGGCCCT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCTCGAAATGGGTCTTTaGTGTTTGGAGACCAGATTA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKLEMGL*CLETRL
Trigger: TAATCTGGTCTCCAAACACCAAAGACCCATTTCGAG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCATTCCAGGTATCCCATaGCCTGGCAAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGIPGIP*PGKPGG
Trigger: GCCCCCTGGTTTGCCAGGTCATGGGATACCTGGAAT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCTTTCCTGGGAAGCCTTaGAGCCCTGGCTCACCCTTG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGFPGKP*SPGSPL
Trigger: CAAGGGTGAGCCAGGGCTTCAAGGCTTCCCAGGAAA...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCCAAGTGTCAGTACTTaGTACATAACTCTATCCCAT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKPSVST*YITLSH
Trigger: ATGGGATAGAGTTATGTATCAAGTACTGACACTTGG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTACTGATATCTCCATaGTTAGAACCACACTGTGGT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKLLISP*LEPHCG
Trigger: ACCACAGTGTGGTTCTAATCATGGAGATATCAGTAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACTTGTATTGGCCTTTaGTTTGTGCCGAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYTCIGL*FVPSTG
Trigger: TCCTGTACTCGGCACAAATCAAAGGCCAATACAAGT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAGCACTCCCAGCAGCTaGAGAGGGCCAGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSSTPSS*RGPGST
Trigger: TGTGCTGCCTGGCCCTCTGCAGCTGCTGGGAGTGCT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCTGGGTACGGCTTCCTTaGCCATTCTTGGCGCCGGTT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGWVRLP*PFLAPV
Trigger: AACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCA...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCTTTTGCCCCAGGCATaGCCATGGCTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILLPQA*PWLLAS
Trigger: GGAAGCCAGGAGCCATGGGCATGCCTGGGGCAAAAG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCTGGCAAACCCCTCATaGCAGGAGGCCCTACTTCAC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGLANPS*QEALLH
Trigger: GTGAAGTAGGGCCTCCTGGCATGAGGGGTTTGCCAG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCCTGGTACACCTTTTTaGCCAGCTTCCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGPGTPF*PASPLG
Trigger: GCCCAAGGGGGAAGCTGGGCAAAAAGGTGTACCAGG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCACTGCACTCCCAGATaGCTGGTCCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGHCTPR*LVQEAL
Trigger: AAGGGCTTCCTGGACCAGGCATCTGGGAGTGCAGTG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTACACCTGGCGCACCTaGCATCCCGAAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIYTWRT*HPEALV
Trigger: GACAAGGGCTTCGGGATGCCAGGTGCGCCAGGTGTA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTGGTTTGCCCACTCCTaGCAGTCCAACAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSWFAHS*QSNRAG
Trigger: CCCGGCCCTGTTGGACTGCCAGGAGTGGGCAAACCA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAAATCCTGGCTGGCCTaGGATCCCATCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIKSWLA*DPILAW
Trigger: CCAGGCCAGGATGGGATCCCAGGCCAGCCAGGATTT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGGGTCCTGGGAAGCCTaGTTTCCCAATCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGGSWEA*FPNPWK
Trigger: CTTCCAGGGATTGGGAAACCAGGCTTCCCAGGACCC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATCCTTTCTCCCCTCTTaGTCCAAGAGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKSFLPS*SKSPRN
Trigger: GTTCCTGGGGCTCTTGGACCAAGAGGGGAGAAAGGA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGAAACCTGGCTTTCCTaGGAAGCCTTGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKETWLS*EALKPW
Trigger: CCAGGGCTTCAAGGCTTCCCAGGAAAGCCAGGTTTC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGGCACCAGGCTTCCCTaGGGGGCCATGAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNGTRLP*GAMKSC
Trigger: GCAGGACTTCATGGCCCCCCAGGGAAGCCTGGTGCC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGCACTCCCAGATGCCTaGTCCAGGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKALPDA*SRKPFL
Trigger: CAAAAAGGGCTTCCTGGACCAGGCATCTGGGAGTGC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTACAGGCTGCTGTGTaGAGTATTAAACATGCATCT +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKLQAAV*SIKHAS
Trigger: AGATGCATGTTTAATACTCCACACAGCAGCCTGTAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAGGGCCCCCTCCCACTaGGGCGGTAACACTACGGGT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNRAPSH*GGNTTG
Trigger: ACCCGTAGTGTTACCGCCCCAGTGGGAGGGGGCCCT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTCACAAAGGCCGATTaGTTCACCCATTCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKFTKAD*FTHSFR
Trigger: TCTAAAAGAATGGGTGAACCAATCGGCCTTTGTGAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGCAGAAGGAGCCCAATaGATCCATGCTGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKAEGAQ*IHAAHH
Trigger: ATGGTGGGCAGCATGGATCCATTGGGCTCCTTCTGC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGCTGGTGCCTTCCTGTaGCACCTCTGGGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSAGAFL*HLWGWF
Trigger: AAACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACATTCTTGGCGCCGGTTaGATTTCCTTCATATATTGG +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYILGAG*ISFIYW
Trigger: CCAATATATGAAGGAAATTCAACCGGCGCCAAGAAT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTATTCCAGGTATCCCATaGCCTGGCAAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIIPGIP*PGKPGG
Trigger: GCCCCCTGGTTTGCCAGGTCATGGGATACCTGGAAT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATTGGATTTTGAAAGCTaGCTTTGGCCGGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKLDFES*LWPGTV
Trigger: CACCGTGCCCGGCCAAAGTCAGCTTTCAAAATCCAA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCTGGCAAACCCCTCATaGCAGGAGGCCCTACTTCAC +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILANPS*QEALLH
Trigger: GTGAAGTAGGGCCTCCTGGCATGAGGGGTTTGCCAG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGGTTGTAGTTCTGTCTaGCGTTATACAGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYGCSSV*RYTAVC
Trigger: ACAAACTGCTGTATAACGGCAGACAGAACTACAACC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCCTGAGCAGCAGCACTaGACTCCCAGATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSPEQQH*TPRCLV
Trigger: GACCAGGCATCTGGGAGTGCAGTGCTGCTGCTCAGG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGAGGAGTGGACATACTaGCCGGCATACAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGEEWTY*PAYSPA
Trigger: TGCAGGACTGTATGCCGGGCAGTATGTCCACTCCTC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGTATTGTGGAATTTGTaGTGGCATCTGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYVLWNL*WHLRRN
Trigger: ATTCCTCCTCAGATGCCACCACAAATTCCACAATAC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGTTCCCCTCGTAAACTaGCTAATGGTATTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYVPLVN*LMVFLC
Trigger: GCAAAGAAATACCATTAGCCAGTTTACGAGGGGAAC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAGGTATCCCATGACCTaGCAAACCAGGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSRYPMT*QTRGPR
Trigger: CCTGGGCCCCCTGGTTTGCCAGGTCATGGGATACCT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACTGGTTTGCCCACTCCTaGCAGTCCAACAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNWFAHS*QSNRAG
Trigger: CCCGGCCCTGTTGGACTGCCAGGAGTGGGCAAACCA...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTGAAGCCTGTCACTCCTaGTTTGCCCACTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIEACHS*FAHSWQ
Trigger: CTGCCAGGAGTGGGCAAACCAGGAGTGACAGGCTTC...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGATCCCATCCTGGCCTaGCTTTCCAATTCCGGGTAT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKDPILA*LSNSGY
Trigger: ATACCCGGAATTGGAAAGCCAGGCCAGGATGGGATC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTGGTTTCCCAATCCCTaGAAGGCCTGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSWFPNP*KAWGSW
Trigger: CCAGGACCCCCAGGCCTTCCAGGGATTGGGAAACCA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCTCCTGGGGCACCTATTaGTCCTTTCTCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGSWGTY*SFLPSW
Trigger: CCAAGAGGGGAGAAAGGACCAATAGGTGCCCCAGGA...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAGGGCCCATAGGACCTaGGATTCCAGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNRAHRT*DSRQAW
Trigger: CCAGGCCTGCCTGGAATCCCAGGTCCTATGGGCCCT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAAAAACCAATAGCACCTaGAGGGCCCATAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKKTNST*RAHRTW
Trigger: CCAGGTCCTATGGGCCCTCCAGGTGCTATTGGTTTT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCACCTGGTGGCCCCTGTaGCCCTACAATCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSTWWPL*PYNPTF
Trigger: GAAGGTGGGATTGTAGGGCCACAGGGGCCACCAGGT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCACCCTTGGGACCTGGTaGCCCCTGTGGCCCTACAAT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSTLGTW*PLWPYN
Trigger: ATTGTAGGGCCACAGGGGCCACCAGGTCCCAAGGGT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGAAACCTGGCTTTCCTaGGAAGCCTTGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGETWLS*EALKPW
Trigger: CCAGGGCTTCAAGGCTTCCCAGGAAAGCCAGGTTTC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAAACACCAGGGAGTCCTaGTACACCTTTTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKNTRES*YTFLPS
Trigger: GCTGGGCAAAAAGGTGTACCAGGACTCCCTGGTGTT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTCCCAGCCCCATATCTaGCAGATACTCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCISQPHI*QILSLG
Trigger: CCCCAGGGAGAGTATCTGCCAGATATGGGGCTGGGA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATTTGTTAAACTTCACTaGGGCCCCCACCGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKFVKLH*GPHRWE
Trigger: TTCCCACCGGTGGGGGCCCCAGTGAAGTTTAACAAA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGCAGAAGGAGCCCAATaGATCCATGCTGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGAEGAQ*IHAAHH
Trigger: ATGGTGGGCAGCATGGATCCATTGGGCTCCTTCTGC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTCTCTCTTTCTTGGTaGGAATTAAAAGCCCATACA +
Preference number: 4 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKFSLSW*ELKAHT
Trigger: TGTATGGGCTTTTAATTCCCACCAAGAAAGAGAGAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTACGTGTGAGCTCCCTTaGGCACGTAAGATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCITCELP*ARKIRE
Trigger: CTCCCTGATCTTACGTGCTCAAGGGAGCTCACACGT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR TCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCATCCCAGGAGGTCCTTaGACCCCCGGTACCCCAATA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSIPGGP*TPGTPI
Trigger: TATTGGGGTACCGGGGGTTCAAGGACCTCCTGGGAT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACCAGGGACCTCACAGGTaGAGATGCCTGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNQGPHR*RCLSAG
Trigger: ACCCGCAGACAGGCATCTTCACCTGTGAGGTCCCTG...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCTGTCACTCCTGGTTTaGCCACTCCTGGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILSLLV*PLLAVQ
Trigger: TTGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGGGGCCATGAAGTCCTaGCACTCCGGGTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSGAMKS*HSGFPY
Trigger: ATAGGGAAACCCGGAGTGGCAGGACTTCATGGCCCC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGAGACCAGATTAGAATaGCCAAAGCAGTTAGTATGT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYETRLE*PKQLVC
Trigger: ACATACTAACTGCTTTGGGCATTCTAATCTGGTCTC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGACCAATGTCCTTGCTaGTGCCTTCCTGTGACACCT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGDQCPC*CLPVTP
Trigger: AGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAACATGCCCATGGCTCCTaGCTTCCCTGGCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREHAHGS*LPWHSR
Trigger: CCTGGAATGCCAGGGAAGCCAGGAGCCATGGGCATG...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAGGTCCTTGTGGTCCTaGGATCCCCATAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIRSLWS*DPHRPN
Trigger: ATTGGGCCTATGGGGATCCCAGGACCACAAGGACCT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATACACCTGGCGCACCTaGCATCCCGAAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREYTWRT*HPEALV
Trigger: GACAAGGGCTTCGGGATGCCAGGTGCGCCAGGTGTA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAGGCCCCTTTACACCTaGCGCACCTGGCATCCCGAA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNRPLYT*RTWHPE
Trigger: TTCGGGATGCCAGGTGCGCCAGGTGTAAAGGGGCCT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGATCCCATCCTGGCCTaGCTTTCCAATTCCGGGTAT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGDPILA*LSNSGY
Trigger: ATACCCGGAATTGGAAAGCCAGGCCAGGATGGGATC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAAAACCAATAGCACCTaGAGGGCCCATAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGKTNST*RAHRTW
Trigger: CCAGGTCCTATGGGCCCTCCAGGTGCTATTGGTTTT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAACACCAGGGAGTCCTaGTACACCTTTTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGNTRES*YTFLPS
Trigger: GCTGGGCAAAAAGGTGTACCAGGACTCCCTGGTGTT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAGCCTGGAATCCCAGGTaGTCCAATGGGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREAWNPR*SNGATR
Trigger: CCTAGTGGCCCCATTGGACCACCTGGGATTCCAGGC...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTGCACTCCCAGATGCCTaGTCCAGGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIALPDA*SRKPFL
Trigger: CAAAAAGGGCTTCCTGGACCAGGCATCTGGGAGTGC...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTGTTCTGAGGGCATCTaGAGGAACACCCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSCSEGI*RNTRSP
Trigger: CGGAGACCGGGTGTTCCTCCAGATGCCCTCAGAACA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCCTGAAAAGGAGGAGTaGACATACTGCCCGGCATAC +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGPEKEE*TYCPAY
Trigger: GTATGCCGGGCAGTATGTCCACTCCTCCTTTTCAGG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTTACAGGCTGCTGTGTaGAGTATTAAACATGCATCT +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYLQAAV*SIKHAS
Trigger: AGATGCATGTTTAATACTCCACACAGCAGCCTGTAA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTTCACAAAGGCCGATTaGTTCACCCATTCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYFTKAD*FTHSFR
Trigger: TCTAAAAGAATGGGTGAACCAATCGGCCTTTGTGAA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGTCTCAAATCTGTCATaGGAACTCAAACAAGTTACC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYVSNLS*ELKQVT
Trigger: GGTAACTTGTTTGAGTTCCCATGACAGATTTGAGAC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR CAA 72 bp CAGGCTAATAGCAGGCTCGAAATGGGTCTTTGGTGTTaGGAGACCAGATTAGAATGCCCAAAGCAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: QANSRLEMGLWC*ETRLECPKQLV
Trigger: TACTAACTGCTTTGGGCATTCTAATCTGGTCTCCAAACACCAAAGACCCATTTCGAGCCTGCTATTAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACATCGGGGAAGGGCTGTaGTCCGCTGCTGGTAACATG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNIGEGL*SAAGNM
Trigger: CATGTTACCAGCAGCGGATCACAGCCCTTCCCCGAT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR TCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATCCTGCAGCCTGTTCTaGGGGCATCTGGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRESCSLF*GHLEEH
Trigger: GTGTTCCTCCAGATGCCCTCAGAACAGGCTGCAGGA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGGCAGGTGCATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNGRCIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATGCACCTGCC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCTCTTCAGCAGATGCTaGTCTGCCTTCACAACAGCT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGLFSRC*SAFTTA
Trigger: AGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATACTCTTTGCCATACTaGAAGTGGGGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKYSLPY*KWGISL
Trigger: CAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGGTGTGGATACTCTTTaGCATACTGCAAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGGVDTL*HTASGA
Trigger: TGCCCCACTTGCAGTATGGCAAAGAGTATCCACACC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACCACTGCACTCCCAGATaGCTGGTCCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNHCTPR*LVQEAL
Trigger: AAGGGCTTCCTGGACCAGGCATCTGGGAGTGCAGTG...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGAGGAGTGGACATACTaGCCGGCATACAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSEEWTY*PAYSPA
Trigger: TGCAGGACTGTATGCCGGGCAGTATGTCCACTCCTC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGGAGGAATTTGAGGTaGCAGCGGCTTGATCCCATA +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGRRNLR*QRLDPI
Trigger: TATGGGATCAAGCCGCTGCCACCTCAAATTCCTCCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCAGGGGCTGGTATTGTaGAATTTGTGGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGQGLVL*NLWWHL
Trigger: CAGATGCCACCACAAATTCCACAATACCAGCCCCTG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTTGCCATACTGCAAGTaGGGCATCTCCTTGCCCATG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILPYCK*GISLPM
Trigger: CATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATTTCTTTGCCTTTCTTaGGTACGGCTTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKFLCLS*VRLPCP
Trigger: TGGGCAAGGAAGCCGTACCCAAGAAAGGCAAAGAAA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACATTCCAGGCATACCTaGCTTTCCAACTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKHSRHT*LSNSWI
Trigger: TATCCAGGAGTTGGAAAGCCAGGTATGCCTGGAATG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTGTCCTGGTAGTCCTTTaGGTCCTCGATCACCCTTTG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIVLVVL*VLDHPL
Trigger: CAAAGGGTGATCGAGGACCCAAAGGACTACCAGGAC...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGAAGCCTGTCACTCCTaGTTTGCCCACTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNEACHS*FAHSWQ
Trigger: CTGCCAGGAGTGGGCAAACCAGGAGTGACAGGCTTC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTCCTTTCTCCCCTCTTaGTCCAAGAGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSSFLPS*SKSPRN
Trigger: GTTCCTGGGGCTCTTGGACCAAGAGGGGAGAAAGGA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATACTCTCCCTGGGGTaGTGGTGTAGGGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREILSLG*WCRGHH
Trigger: GTGATGCCCCCTACACCACCACCCCAGGGAGAGTAT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATCCCAGCCCCATATCTaGCAGATACTCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRESQPHI*QILSLG
Trigger: CCCCAGGGAGAGTATCTGCCAGATATGGGGCTGGGA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTTCTCTCTTTCTTGGTaGGAATTAAAAGCCCATACA +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYFSLSW*ELKAHT
Trigger: TGTATGGGCTTTTAATTCCCACCAAGAAAGAGAGAA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCACAGACACGCAATTCTaGCGAGGACTCCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGTDTQF*RGLLLL
Trigger: TAGTAACAGGAGTCCTCGTCAGAATTGCGTGTCTGT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGTACAGAGAAGGCACTaGATAAATTCACAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKVQRRH*INSQRP
Trigger: CGGCCTTTGTGAATTTATTCAGTGCCTTCTCTGTAC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGGTTCTCTAGCTCCTTaGGGGTTACTGTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGGSLAP*GLLSNA
Trigger: AGCATTAGACAGTAACCCTCAAGGAGCTAGAGAACC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAAAGACCAATGTCCTTaGTGGTGCCTTCCTGTGACA +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGKDQCP*WCLPVT
Trigger: TGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTGGTGTGGATACTCTTTaGCATACTGCAAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIGVDTL*HTASGA
Trigger: TGCCCCACTTGCAGTATGGCAAAGAGTATCCACACC...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACCTGTCACTCCTGGTTTaGCCACTCCTGGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNLSLLV*PLLAVQ
Trigger: TTGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAG...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGCAGTGAACGTGGTATaGAAAGTAGTAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGAVNVV*KVVDTR
Trigger: CCTGGTGTCTACTACTTTGCATACCACGTTCACTGC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAACAATATGAGTGAGTaGCTTTCATTAGCTATGATC +
Preference number: 4 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYNNMSE*LSLAMI
Trigger: GATCATAGCTAATGAAAGGCACTCACTCATATTGTT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAATATCCCTGTGGCCCTaGTTTTCCTTTAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKISLWP*FSFNSR
Trigger: CCTGGAATTAAAGGAAAACCAGGGCCACAGGGATAT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATCCTGGATATCCCTGTaGCCCTGGTTTTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKSWISL*PWFSFN
Trigger: ATTAAAGGAAAACCAGGGCCACAGGGATATCCAGGA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCATTCCAGGCATACCTaGCTTTCCAACTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGHSRHT*LSNSWI
Trigger: TATCCAGGAGTTGGAAAGCCAGGTATGCCTGGAATG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAGGTCCTTGTGGTCCTaGGATCCCCATAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRERSLWS*DPHRPN
Trigger: ATTGGGCCTATGGGGATCCCAGGACCACAAGGACCT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGTCCTGGTAGTCCTTTaGGTCCTCGATCACCCTTTG +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSVLVVL*VLDHPL
Trigger: CAAAGGGTGATCGAGGACCCAAAGGACTACCAGGAC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGCACTCCCAGATGCCTaGTCCAGGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNALPDA*SRKPFL
Trigger: CAAAAAGGGCTTCCTGGACCAGGCATCTGGGAGTGC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCCTGAAAAGGAGGAGTaGACATACTGCCCGGCATAC +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSPEKEE*TYCPAY
Trigger: GTATGCCGGGCAGTATGTCCACTCCTCCTTTTCAGG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAATTCTTGGCGCCGGTTaGATTTCCTTCATATATTGG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKILGAG*ISFIYW
Trigger: CCAATATATGAAGGAAATTCAACCGGCGCCAAGAAT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACCGGGCTCGTTGTTCTTaGATAGAGCAACCCACACGT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNRARCS*IEQPTR
Trigger: ACGTGTGGGTTGCTCTATTCAAGAACAACGAGCCCG...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAAGAGAGATATCCCTTTaGCTAAAGCATTACCAGGGT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKREISL*LKHYQG
Trigger: ACCCTGGTAATGCTTTAGTCAAAGGGATATCTCTCT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAACTCTGGGGAACAAGTaGGTTAATTACTGCTCATGT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKTLGNK*VNYCSC
Trigger: ACATGAGCAGTAATTAACTCACTTGTTCCCCAGAGT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACTTGGATTTTGAAAGCTaGCTTTGGCCGGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNLDFES*LWPGTV
Trigger: CACCGTGCCCGGCCAAAGTCAGCTTTCAAAATCCAA...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCTCTTCAGCAGATGCTaGTCTGCCTTCACAACAGCT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSLFSRC*SAFTTA
Trigger: AGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTACTCTTTGCCATACTaGAAGTGGGGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIYSLPY*KWGISL
Trigger: CAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGGTTGTAGTTCTGTCTaGCGTTATACAGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKGCSSV*RYTAVC
Trigger: ACAAACTGCTGTATAACGGCAGACAGAACTACAACC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATTGGCCTTTGATTTGTaGCGAGTACAGGATGACATT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKLAFDL*RVQDDI
Trigger: AATGTCATCCTGTACTCGGCACAAATCAAAGGCCAA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGCTTTTATGGGCAGGTaGGAGGAGCTGCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNAFMGR*EELLLI
Trigger: TATGAGGAGCAGCTCCTCCCACCTGCCCATAAAAGC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATTGCCATACTGCAAGTaGGGCATCTCCTTGCCCATG +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRELPYCK*GISLPM
Trigger: CATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGTTCCCCTCGTAAACTaGCTAATGGTATTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKVPLVN*LMVFLC
Trigger: GCAAAGAAATACCATTAGCCAGTTTACGAGGGGAAC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCTCCTGGATATCCCTGTaGCCCTGGTTTTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGSWISL*PWFSFN
Trigger: ATTAAAGGAAAACCAGGGCCACAGGGATATCCAGGA...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGAGAGATATCCCTTTaGCTAAAGCATTACCAGGGT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGREISL*LKHYQG
Trigger: ACCCTGGTAATGCTTTAGTCAAAGGGATATCTCTCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTGTACAGAGAAGGCACTaGATAAATTCACAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIVQRRH*INSQRP
Trigger: CGGCCTTTGTGAATTTATTCAGTGCCTTCTCTGTAC...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACCCGCTGCTGGTAACATaGACTTGGCTTTTATGGGCA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNPLLVT*TWLLWA
Trigger: TGCCCATAAAAGCCAAGTGCATGTTACCAGCAGCGG...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTGTCTCTTCAGCAGATaGTGCTCTGCCTTCACAACA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSCLFSR*CSAFTT
Trigger: TGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAAAGACCAATGTCCTTaGTGGTGCCTTCCTGTGACA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSKDQCP*WCLPVT
Trigger: TGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGGTGTGGATACTCTTTaGCATACTGCAAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNGVDTL*HTASGA
Trigger: TGCCCCACTTGCAGTATGGCAAAGAGTATCCACACC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACTAATGGTATTTCTTTaGCTTTCTTGGGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKLMVFL*LSWVRL
Trigger: AAGCCGTACCCAAGAAAGGCAAAGAAATACCATTAG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGCAGTGAACGTGGTATaGAAAGTAGTAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSAVNVV*KVVDTR
Trigger: CCTGGTGTCTACTACTTTGCATACCACGTTCACTGC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCTGAGACAGGACAATTaGTTGAACCTAGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILRQDN*LNLGGR
Trigger: TCTACCTCCTAGGTTCAAGCAATTGTCCTGTCTCAG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAACAGCAGATGCTGCTCTaGCTTCACAACAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREQQMLL*LHNSFL
Trigger: CAAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTG...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAGGAGGAATTTGAGGTaGCAGCGGCTTGATCCCATA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNRRNLR*QRLDPI
Trigger: TATGGGATCAAGCCGCTGCCACCTCAAATTCCTCCT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTTCCTTGCCCATTCTTaGCGCCGGTTGAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSFLAHS*RRLNFL
Trigger: AAGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTATATCCCTGTGGCCCTaGTTTTCCTTTAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIISLWP*FSFNSR
Trigger: CCTGGAATTAAAGGAAAACCAGGGCCACAGGGATAT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCATTCCAGGCATACCTaGCTTTCCAACTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSHSRHT*LSNSWI
Trigger: TATCCAGGAGTTGGAAAGCCAGGTATGCCTGGAATG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATTTTCAGACTTGTATTaGCCTTTGATTTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKFSDLY*PLICAE
Trigger: CTCGGCACAAATCAAAGGCCAATACAAGTCTGAAAA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAAGAATGCACAGTATTTaGCATAGATGTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKRMHSI*HRCCSS
Trigger: AGAGGAGCAACATCTATGCCAAATACTGTGCATTCT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCCAAGTGTCAGTACTTaGTACATAACTCTATCCCAT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGPSVST*YITLSH
Trigger: ATGGGATAGAGTTATGTATCAAGTACTGACACTTGG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAATAAAACAGCTAATATaGTTCCAGTGGGTACAACCA +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKIKQLI*FQWVQP
Trigger: TGGTTGTACCCACTGGAATCATATTAGCTGTTTTAT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR TCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAACAGACACGCAATTCTaGCGAGGACTCCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRETDTQF*RGLLLL
Trigger: TAGTAACAGGAGTCCTCGTCAGAATTGCGTGTCTGT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATTATGGCTTGGATTTTaGAAGCTGACTTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRELWLGF*KLTLAG
Trigger: CCCGGCCAAAGTCAGCTTTCAAAATCCAAGCCATAA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATGTCTCTTCAGCAGATaGTGCTCTGCCTTCACAACA +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRECLFSR*CSAFTT
Trigger: TGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCTGAGACAGGACAATTaGTTGAACCTAGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSLRQDN*LNLGGR
Trigger: TCTACCTCCTAGGTTCAAGCAATTGTCCTGTCTCAG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTTGGCCTTTGATTTGTaGCGAGTACAGGATGACATT +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILAFDL*RVQDDI
Trigger: AATGTCATCCTGTACTCGGCACAAATCAAAGGCCAA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTGTATTGTGGAATTTGTaGTGGCATCTGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIVLWNL*WHLRRN
Trigger: ATTCCTCCTCAGATGCCACCACAAATTCCACAATAC...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATTCCTTGCCCATTCTTaGCGCCGGTTGAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREFLAHS*RRLNFL
Trigger: AAGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATTTCTTTGCCTTTCTTaGGTACGGCTTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREFLCLS*VRLPCP
Trigger: TGGGCAAGGAAGCCGTACCCAAGAAAGGCAAAGAAA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTGTTCCCCTCGTAAACTaGCTAATGGTATTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIVPLVN*LMVFLC
Trigger: GCAAAGAAATACCATTAGCCAGTTTACGAGGGGAAC...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCATAGCAGGCTCGAAATaGGTCTTTGGTGTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSIAGSK*VFGVWR
Trigger: TCTCCAAACACCAAAGACCCATTTCGAGCCTGCTAT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAGAGAGATATCCCTTTaGCTAAAGCATTACCAGGGT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSREISL*LKHYQG
Trigger: ACCCTGGTAATGCTTTAGTCAAAGGGATATCTCTCT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAACTTGTATTGGCCTTTaGTTTGTGCCGAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRETCIGL*FVPSTG
Trigger: TCCTGTACTCGGCACAAATCAAAGGCCAATACAAGT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAAACAATATGAGTGAGTaGCTTTCATTAGCTATGATC +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKNNMSE*LSLAMI
Trigger: GATCATAGCTAATGAAAGGCACTCACTCATATTGTT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAATGCTCCACAAAAGTaGCTTACCCAGTGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRENAPQK*LTQCLV
Trigger: TACCAAGCACTGGGTAAGGCACTTTTGTGGAGCATT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCATTTCCTTCATATATTaGGGTAGGTGTGGATACTCT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGISFIY*GRCGYS
Trigger: AGAGTATCCACACCTACCCCAATATATGAAGGAAAT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATCCTGGATATCCCTGTaGCCCTGGTTTTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRESWISL*PWFSFN
Trigger: ATTAAAGGAAAACCAGGGCCACAGGGATATCCAGGA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATCACCAATTATGGCTTaGATTTTGAAAGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKSPIMA*ILKADF
Trigger: AAAGTCAGCTTTCAAAATCCAAGCCATAATTGGTGA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAGAATGCACAGTATTTaGCATAGATGTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIRMHSI*HRCCSS
Trigger: AGAGGAGCAACATCTATGCCAAATACTGTGCATTCT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGTTGTCTTTTGTTCTTaGGATGACTTCAAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNVVFCS*DDFKGE
Trigger: CTCACCCTTGAAGTCATCTCAAGAACAAAAGACAAC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR TCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTATAAAACAGCTAATATaGTTCCAGTGGGTACAACCA +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIIKQLI*FQWVQP
Trigger: TGGTTGTACCCACTGGAATCATATTAGCTGTTTTAT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAAAAGACACAGCCTCTaGTACAAGAGAGATATCCCT +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREKRHSL*YKRDIP
Trigger: AGGGATATCTCTCTTGTATCAGAGGCTGTGTCTTTT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAAAAGACACAGCCTCTaGTACAAGAGAGATATCCCT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNKRHSL*YKRDIP
Trigger: AGGGATATCTCTCTTGTATCAGAGGCTGTGTCTTTT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACACTCTGGGGAACAAGTaGGTTAATTACTGCTCATGT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNTLGNK*VNYCSC
Trigger: ACATGAGCAGTAATTAACTCACTTGTTCCCCAGAGT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCTAATGGTATTTCTTTaGCTTTCTTGGGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSLMVFL*LSWVRL
Trigger: AAGCCGTACCCAAGAAAGGCAAAGAAATACCATTAG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAGGTTGTAGTTCTGTCTaGCGTTATACAGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREGCSSV*RYTAVC
Trigger: ACAAACTGCTGTATAACGGCAGACAGAACTACAACC...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAACACAGGCTCTTGTTaGCCTTTGACATTCTACATA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSNTGSC*PLTFYI
Trigger: TATGTAGAATGTCAAAGGGCAACAAGAGCCTGTGTT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAAAGCAGTTAGTATGTaGCCAAGCAAAAACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSKAVSM*PSKNLE
Trigger: TTCCAGGTTTTTGCTTGGGCACATACTAACTGCTTT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGTATTGTGGAATTTGTaGTGGCATCTGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNVLWNL*WHLRRN
Trigger: ATTCCTCCTCAGATGCCACCACAAATTCCACAATAC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTATTTCCTTCATATATTaGGGTAGGTGTGGATACTCT +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIISFIY*GRCGYS
Trigger: AGAGTATCCACACCTACCCCAATATATGAAGGAAAT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACCTCGAAATGGGTCTTTaGTGTTTGGAGACCAGATTA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNLEMGL*CLETRL
Trigger: TAATCTGGTCTCCAAACACCAAAGACCCATTTCGAG...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAATTTCTCTCTTTCTTaGTGGGAATTAAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGNFSLS*WELKAH
Trigger: ATGGGCTTTTAATTCCCACCAAGAAAGAGAGAAATT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGTCTCAAATCTGTCATaGGAACTCAAACAAGTTACC +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSVSNLS*ELKQVT
Trigger: GGTAACTTGTTTGAGTTCCCATGACAGATTTGAGAC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAAAGCAGTTAGTATGTaGCCAAGCAAAAACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREKAVSM*PSKNLE
Trigger: TTCCAGGTTTTTGCTTGGGCACATACTAACTGCTTT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAGAGACCAGATTAGAATaGCCAAAGCAGTTAGTATGT +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREETRLE*PKQLVC
Trigger: ACATACTAACTGCTTTGGGCATTCTAATCTGGTCTC...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR GCA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTATGTTAACATGTTGTaGAGCACTCAAAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIYVNML*STQKGN
Trigger: ATTTCCCTTTTGAGTGCTGCACAACATGTTAACATA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCATTTCCTTCATATATTaGGGTAGGTGTGGATACTCT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSISFIY*GRCGYS
Trigger: AGAGTATCCACACCTACCCCAATATATGAAGGAAAT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATTTTCAGACTTGTATTaGCCTTTGATTTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNREFSDLY*PLICAE
Trigger: CTCGGCACAAATCAAAGGCCAATACAAGTCTGAAAA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAACCCAAAGTATATTTaGCCACATAGATGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRENPKYI*PHRCCL
Trigger: CAGACAGCATCTATGTGGCCAAATATACTTTGGGTT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAACCCAAAGTATATTTaGCCACATAGATGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNNPKYI*PHRCCL
Trigger: CAGACAGCATCTATGTGGCCAAATATACTTTGGGTT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTCACCAATTATGGCTTaGATTTTGAAAGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: LEPQITYQFAYMLNREMSSPIMA*ILKADF
Trigger: AAAGTCAGCTTTCAAAATCCAAGCCATAATTGGTGA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
3UTR CAA 72 bp CAGTCTGTTCACCGTTCATTGTATTCTATAAAATATTaGATAACAGTCACCCACTACAGACATTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: QSVHRSLYSIKY*ITVTHYRHSFP
Trigger: GGGAAAAGAATGTCTGTAGTGGGTGACTGTTATCAAATATTTTATAGAATACAATGAACGGTGAACAGACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CCA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAATTTCTCTCTTTCTTaGTGGGAATTAAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LTLEPQITYQFAYMLNRENFSLS*WELKAH
Trigger: ATGGGCTTTTAATTCCCACCAAGAAAGAGAGAAATT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS GCA 90 bp TTCCCAGGGGGCCCTGGGGCCCAGGGAAGCCTGTCACTCCTGGTTTaGCCACTCCTGGCAGTCCAACAGGGCCGGGAGGGCCGTGCATCC +
Preference number: 5 (lower is better)
Translates to: FPGGPGAQGSLSLLV*PLLAVQQGREGRAS
Trigger: GGATGCACGGCCCTCCCGGCCCTGTTGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAGGCTTCCCTGGGCCCCAGGGCCCCCTGGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS GCA 90 bp CCTGGTTTGCCCACTCCTGGCAGTCCAACAGGGCCGGGAGGGCCGTaGATCCCTGGAGGCCCCTTTACACCTGGCGCACCTGGCATCCCG +
Preference number: 5 (lower is better)
Translates to: PGLPTPGSPTGPGGP*IPGGPFTPGAPGIP
Trigger: CGGGATGCCAGGTGCGCCAGGTGTAAAGGGGCCTCCAGGGATGCACGGCCCTCCCGGCCCTGTTGGACTGCCAGGAGTGGGCAAACCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp GCCCACTCCTGGCAGTCCAACAGGGCCGGGAGGGCCGTGCATCCCTaGAGGCCCCTTTACACCTGGCGCACCTGGCATCCCGAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: AHSWQSNRAGRAVHP*RPLYTWRTWHPEAL
Trigger: AAGGGCTTCGGGATGCCAGGTGCGCCAGGTGTAAAGGGGCCTCCAGGGATGCACGGCCCTCCCGGCCCTGTTGGACTGCCAGGAGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp AACAGGGCCGGGAGGGCCGTGCATCCCTGGAGGCCCCTTTACACCTaGCGCACCTGGCATCCCGAAGCCCTTGTCTCCTTTAGGACCCCG +
Preference number: 5 (lower is better)
Translates to: NRAGRAVHPWRPLYT*RTWHPEALVSFRTP
Trigger: CGGGGTCCTAAAGGAGACAAGGGCTTCGGGATGCCAGGTGCGCCAGGTGTAAAGGGGCCTCCAGGGATGCACGGCCCTCCCGGCCCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp CTTGGCTTTTATGGGCAGGTGGGAGGAGCTGCTCCTCATAGTAGGTaGGCAGGGAAGGAGCGGCGGGCGGGCAGCCTCTGGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LGFYGQVGGAAPHSR*AGKERRAGSLWRSW
Trigger: CCAGCTCCTCCAGAGGCTGCCCGCCCGCCGCTCCTTCCCTGCCCACCTACTATGAGGAGCAGCTCCTCCCACCTGCCCATAAAAGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000452013.5
ENST00000463753.5
ENST00000474648.5
ENST00000483969.5
CDS CCA 90 bp GGGAGGGCCGTGCATCCCTGGAGGCCCCTTTACACCTGGCGCACCTaGCATCCCGAAGCCCTTGTCTCCTTTAGGACCCCGAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GRAVHPWRPLYTWRT*HPEALVSFRTPKAL
Trigger: CAAGGCCTTCGGGGTCCTAAAGGAGACAAGGGCTTCGGGATGCCAGGTGCGCCAGGTGTAAAGGGGCCTCCAGGGATGCACGGCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp TGGAAGGCCAGGCTGGCCTTGAGGACCAAGGGCACCAGGCTTCCCTaGGGGGCCATGAAGTCCTGCCACTCCGGGTTTCCCTATACCAGG +
Preference number: 5 (lower is better)
Translates to: WKARLALRTKGTRLP*GAMKSCHSGFPYTR
Trigger: CCTGGTATAGGGAAACCCGGAGTGGCAGGACTTCATGGCCCCCCAGGGAAGCCTGGTGCCCTTGGTCCTCAAGGCCAGCCTGGCCTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp CGTGTGAGCTCCCTTGAGCACGTAAGATCAGGGAGAGAGGCTCGCTaGCTCCCACGGAGAGGATCGGGGAAGGGCTGTGATCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RVSSLEHVRSGREAR*LPRRGSGKGCDPLL
Trigger: CAGCAGCGGATCACAGCCCTTCCCCGATCCTCTCCGTGGGAGCCAGCGAGCCTCTCTCCCTGATCTTACGTGCTCAAGGGAGCTCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261037.7
ENST00000463753.5
ENST00000474648.5
ENST00000483969.5
CDS GCA 90 bp GCCCAGCTTCCCCCTTGGGCCCTATGGGACCTGGCAAACCCCTCATaGCAGGAGGCCCTACTTCACCAAGGAAACCTGGCTTTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: AQLPPWALWDLANPS*QEALLHQGNLAFLG
Trigger: TCCCAGGAAAGCCAGGTTTCCTTGGTGAAGTAGGGCCTCCTGGCATGAGGGGTTTGCCAGGTCCCATAGGGCCCAAGGGGGAAGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp AATAGCACCTGGAGGGCCCATAGGACCTGGGATTCCAGGCAGGCCTaGCTCTCCTGGAGGACCCCCTATTCCTGGGGCACCTATTGGTCC +
Preference number: 5 (lower is better)
Translates to: NSTWRAHRTWDSRQA*LSWRTPYSWGTYWS
Trigger: GGACCAATAGGTGCCCCAGGAATAGGGGGTCCTCCAGGAGAGCCAGGCCTGCCTGGAATCCCAGGTCCTATGGGCCCTCCAGGTGCTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp CTTTCCTGGGAAGCCTTGAAGCCCTGGCTCACCCTTGGGACCTGGTaGCCCCTGTGGCCCTACAATCCCACCTTCTCCTTTGGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LSWEALKPWLTLGTW*PLWPYNPTFSFGSR
Trigger: CCTGGACCCAAAGGAGAAGGTGGGATTGTAGGGCCACAGGGGCCACCAGGTCCCAAGGGTGAGCCAGGGCTTCAAGGCTTCCCAGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp TGGCTTTCCTGGGAAGCCTTGAAGCCCTGGCTCACCCTTGGGACCTaGTGGCCCCTGTGGCCCTACAATCCCACCTTCTCCTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: WLSWEALKPWLTLGT*WPLWPYNPTFSFGS
Trigger: GGACCCAAAGGAGAAGGTGGGATTGTAGGGCCACAGGGGCCACCAGGTCCCAAGGGTGAGCCAGGGCTTCAAGGCTTCCCAGGAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS TCA 90 bp GAGAGAGGCTCGCTGGCTCCCACGGAGAGGATCGGGGAAGGGCTGTaGTCCGCTGCTGGTAACATGCACTTGGCTTTTATGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ERGSLAPTERIGEGL*SAAGNMHLAFMGRW
Trigger: CCACCTGCCCATAAAAGCCAAGTGCATGTTACCAGCAGCGGATCACAGCCCTTCCCCGATCCTCTCCGTGGGAGCCAGCGAGCCTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000452013.5
ENST00000463753.5
ENST00000474648.5
ENST00000483969.5
CDS TCA 90 bp CCATCCTGGCCTGGCTTTCCAATTCCGGGTATCCCAGGAGGTCCTTaGACCCCCGGTACCCCAATAGGGCCTTGTGGCCCAGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PSWPGFPIPGIPGGP*TPGTPIGPCGPGSP
Trigger: AGGAGAACCTGGGCCACAAGGCCCTATTGGGGTACCGGGGGTTCAAGGACCTCCTGGGATACCCGGAATTGGAAAGCCAGGCCAGGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp TGGCTCTCCCTTAGGTCCGAGAAGCCCTGGAACACCAGGGAGTCCTaGTACACCTTTTTGCCCAGCTTCCCCCTTGGGCCCTATGGGACC +
Preference number: 5 (lower is better)
Translates to: WLSLRSEKPWNTRES*YTFLPSFPLGPYGT
Trigger: GGTCCCATAGGGCCCAAGGGGGAAGCTGGGCAAAAAGGTGTACCAGGACTCCCTGGTGTTCCAGGGCTTCTCGGACCTAAGGGAGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS GCA 90 bp GGTCCTGGTAGTCCTTTGGGTCCTCGATCACCCTTTGGTCCTGGTTaGCCTGGTAACCCTGGCCCACCTGGCTTCCCAATGCCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: GPGSPLGPRSPFGPG*PGNPGPPGFPMPGS
Trigger: ACTTCCTGGCATTGGGAAGCCAGGTGGGCCAGGGTTACCAGGGCAACCAGGACCAAAGGGTGATCGAGGACCCAAAGGACTACCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp TGGCAAACCCCTCATGCCAGGAGGCCCTACTTCACCAAGGAAACCTaGCTTTCCTGGGAAGCCTTGAAGCCCTGGCTCACCCTTGGGACC +
Preference number: 5 (lower is better)
Translates to: WQTPHARRPYFTKET*LSWEALKPWLTLGT
Trigger: GGTCCCAAGGGTGAGCCAGGGCTTCAAGGCTTCCCAGGAAAGCCAGGTTTCCTTGGTGAAGTAGGGCCTCCTGGCATGAGGGGTTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp ACCCGGTCTCCGGGCCTGAGCAGCAGCACTGCACTCCCAGATGCCTaGTCCAGGAAGCCCTTTTTGTACTCGTCGTACGTGTACATCACG +
Preference number: 5 (lower is better)
Translates to: TRSPGLSSSTALPDA*SRKPFLYSSYVYIT
Trigger: CGTGATGTACACGTACGACGAGTACAAAAAGGGCTTCCTGGACCAGGCATCTGGGAGTGCAGTGCTGCTGCTCAGGCCCGGAGACCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp TCACAACAGCTTCTTGAGCACGTAAGATCAGGGAGAGAGGCTCGCTaGCTCCCACGGAGAGGATCGGGGAAGGGCTGTGATCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SQQLLEHVRSGREAR*LPRRGSGKGCDPLL
Trigger: CAGCAGCGGATCACAGCCCTTCCCCGATCCTCTCCGTGGGAGCCAGCGAGCCTCTCTCCCTGATCTTACGTGCTCAAGAAGCTGTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452013.5
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTGCCCAGCTTCCCCCTaGGGCCCTATGGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKCPASP*GPMGPG
Trigger: GCCAGGTCCCATAGGGCCCAAGGGGGAAGCTGGGCA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS GCA 90 bp GAACACCCGGTCTCCGGGCCTGAGCAGCAGCACTGCACTCCCAGATaGCTGGTCCAGGAAGCCCTTTTTGTACTCGTCGTACGTGTACAT +
Preference number: 5 (lower is better)
Translates to: EHPVSGPEQQHCTPR*LVQEALFVLVVRVH
Trigger: ATGTACACGTACGACGAGTACAAAAAGGGCTTCCTGGACCAGGCATCTGGGAGTGCAGTGCTGCTGCTCAGGCCCGGAGACCGGGTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTGGGTACGGCTTCCTaGCCCATTCTTGGCGCCGGT +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKLGTAS*PILGAG
Trigger: ACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGGCATCCCGAAGCCCTaGTCTCCTTTAGGACCCCGA +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKGIPKP*SPLGPR
Trigger: TCGGGGTCCTAAAGGAGACAAGGGCTTCGGGATGCC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTACCCCAATAGGGCCTaGTGGCCCAGGTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKYPNRA*WPRFSW
Trigger: CCAGGAGAACCTGGGCCACAAGGCCCTATTGGGGTA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp GGCCAAAGGCATGTGAGGTACTTGCTGACCCAGGGGCTGGTATTGTaGAATTTGTGGTGGCATCTGAGGAGGAATTTGAGGTGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: GQRHVRYLLTQGLVL*NLWWHLRRNLRWQR
Trigger: CCGCTGCCACCTCAAATTCCTCCTCAGATGCCACCACAAATTCCACAATACCAGCCCCTGGGTCAGCAAGTACCTCACATGCCTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 90 bp CATACTGCAAGTGGGGCATCTCCTTGCCCATGGCAAGGCCATCTTTaGCCAAAGGCATGTGAGGTACTTGCTGACCCAGGGGCTGGTATT +
Preference number: 5 (lower is better)
Translates to: HTASGASPCPWQGHL*PKACEVLADPGAGI
Trigger: AATACCAGCCCCTGGGTCAGCAAGTACCTCACATGCCTTTGGCCAAAGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAAGTGGGGCATCTCCTaGCCCATGGCAAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKKWGIS*PMARPS
Trigger: AGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCCCAGGAGGTCCTaGAACCCCCGGTACCCCAAT +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKYPRRS*NPRYPN
Trigger: ATTGGGGTACCGGGGGTTCAAGGACCTCCTGGGATA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGAGTCCTTGCTCCCCTTaGCCACCTGGAAATCCTGGC +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKSPCSP*PPGNPG
Trigger: GCCAGGATTTCCAGGTGGCAAAGGGGAGCAAGGACT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS GCA 90 bp AGCCTGATGGAACTCAGGGAAATGGTAAGCAGCACTCCCAGCAGCTaGAGAGGGCCAGGCAGCACAGCCATCACATTTATACTTGACAGG +
Preference number: 5 (lower is better)
Translates to: SLMELREMVSSTPSS*RGPGSTAITFILDR
Trigger: CCTGTCAAGTATAAATGTGATGGCTGTGCTGCCTGGCCCTCTGCAGCTGCTGGGAGTGCTGCTTACCATTTCCCTGAGTTCCATCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 90 bp CATGTGAGGTACTTGCTGACCCAGGGGCTGGTATTGTGGAATTTGTaGTGGCATCTGAGGAGGAATTTGAGGTGGCAGCGGCTTGATCCC +
Preference number: 5 (lower is better)
Translates to: HVRYLLTQGLVLWNL*WHLRRNLRWQRLDP
Trigger: GGGATCAAGCCGCTGCCACCTCAAATTCCTCCTCAGATGCCACCACAAATTCCACAATACCAGCCCCTGGGTCAGCAAGTACCTCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTTGGGTACGGCTTCCTaGCCCATTCTTGGCGCCGGT +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYLGTAS*PILGAG
Trigger: ACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCAA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCCTGTCACTCCTGGTTaGCCCACTCCTGGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYPVTPG*PTPGSP
Trigger: TGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAGG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTTCCTGGGGCACCTATaGGTCCTTTCTCCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKFLGHL*VLSPLL
Trigger: CAAGAGGGGAGAAAGGACCAATAGGTGCCCCAGGAA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS GCA 90 bp TCCTGTGACACCTCTGGGGCTGGTTTCTGTCTCTTCAGCAGATGCTaGTCTGCCTTCACAACAGCTTCTGTGGCCTCTGTTTCACAACTC +
Preference number: 5 (lower is better)
Translates to: SCDTSGAGFCLFSRC*SAFTTASVASVSQL
Trigger: GAGTTGTGAAACAGAGGCCACAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACAGAAACCAGCCCCAGAGGTGTCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462604.1
CDS GCA 90 bp CCTTCCTGTGACACCTCTGGGGCTGGTTTCTGTCTCTTCAGCAGATaGTGCTCTGCCTTCACAACAGCTTCTGTGGCCTCTGTTTCACAA +
Preference number: 5 (lower is better)
Translates to: PSCDTSGAGFCLFSR*CSAFTTASVASVSQ
Trigger: TTGTGAAACAGAGGCCACAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACAGAAACCAGCCCCAGAGGTGTCACAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462604.1
CDS CCA 90 bp GTGGATACTCTTTGCCATACTGCAAGTGGGGCATCTCCTTGCCCATaGCAAGGCCATCTTTGGCCAAAGGCATGTGAGGTACTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: VDTLCHTASGASPCP*QGHLWPKACEVLAD
Trigger: GTCAGCAAGTACCTCACATGCCTTTGGCCAAAGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCATCTGAGGAGGAATTaGAGGTGGCAGCGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKHLRRN*RWQRLD
Trigger: ATCAAGCCGCTGCCACCTCAAATTCCTCCTCAGATG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAAGTGGGGCATCTCCTaGCCCATGGCAAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYKWGIS*PMARPS
Trigger: AGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACGTCCTTTCTCCCCTCTaGGTCCAAGAGCCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYVLSPL*VQEPQE
Trigger: TTCCTGGGGCTCTTGGACCAAGAGGGGAGAAAGGAC...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS GCA 90 bp GTAGGTGTGGATACTCTTTGCCATACTGCAAGTGGGGCATCTCCTTaGCCATGGCAAGGCCATCTTTGGCCAAAGGCATGTGAGGTACTT +
Preference number: 5 (lower is better)
Translates to: VGVDTLCHTASGASP*PWQGHLWPKACEVL
Trigger: AAGTACCTCACATGCCTTTGGCCAAAGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCACACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 90 bp CTGGTATTGTGGAATTTGTGGTGGCATCTGAGGAGGAATTTGAGGTaGCAGCGGCTTGATCCCATAGTAGGCACCAGCCTGAATGAGCCT +
Preference number: 5 (lower is better)
Translates to: LVLWNLWWHLRRNLR*QRLDPIVGTSLNEP
Trigger: AGGCTCATTCAGGCTGGTGCCTACTATGGGATCAAGCCGCTGCCACCTCAAATTCCTCCTCAGATGCCACCACAAATTCCACAATACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 90 bp TCCAGGCATACCTGGCTTTCCAACTCCTGGATATCCCTGTGGCCCTaGTTTTCCTTTAATTCCAGGTATCCCATGACCTGGCAAACCAGG +
Preference number: 5 (lower is better)
Translates to: SRHTWLSNSWISLWP*FSFNSRYPMTWQTR
Trigger: CCTGGTTTGCCAGGTCATGGGATACCTGGAATTAAAGGAAAACCAGGGCCACAGGGATATCCAGGAGTTGGAAAGCCAGGTATGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000621757.1
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACTTCCTGGGGCACCTATaGGTCCTTTCTCCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYFLGHL*VLSPLL
Trigger: CAAGAGGGGAGAAAGGACCAATAGGTGCCCCAGGAA...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCTGCCCAGCTTCCCCCTaGGGCCCTATGGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGCPASP*GPMGPG
Trigger: GCCAGGTCCCATAGGGCCCAAGGGGGAAGCTGGGCA...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGGCCCGGCTCCCCTTaGGGGCCTGGAATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGRPGSP*GPGIPG
Trigger: ACCTGGGATTCCAGGCCCCAAAGGGGAGCCGGGCCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTCCAGGAAGCCCTTTTaGTACTCGTCGTACGTGTAC +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKSRKPF*YSSYVY
Trigger: GTACACGTACGACGAGTACAAAAAGGGCTTCCTGGA...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 90 bp TTCATATATTGGGGTAGGTGTGGATACTCTTTGCCATACTGCAAGTaGGGCATCTCCTTGCCCATGGCAAGGCCATCTTTGGCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: FIYWGRCGYSLPYCK*GISLPMARPSLAKG
Trigger: GCCTTTGGCCAAAGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCACACCTACCCCAATATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 90 bp TTAAATGTGTTCCACCCACTCACAGCCACAAGTGGGAGTGAAGGATaGGCTTTTGACCTAAGGGTGGAGCCATACTGGTCCCCCTCATTT +
Preference number: 5 (lower is better)
Translates to: LNVFHPLTATSGSEG*AFDLRVEPYWSPSF
Trigger: AAATGAGGGGGACCAGTATGGCTCCACCCTTAGGTCAAAAGCCCATCCTTCACTCCCACTTGTGGCTGTGAGTGGGTGGAACACATTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACCCAGGGGCTGGTATaGTGGAATTTGTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYTQGLV*WNLWWH
Trigger: ATGCCACCACAAATTCCACAATACCAGCCCCTGGGT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAGGTGTGGATACTCTTaGCCATACTGCAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYRCGYS*PYCKWG
Trigger: GCCCCACTTGCAGTATGGCAAAGAGTATCCACACCT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAGGCCCGGCTCCCCTTaGGGGCCTGGAATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIRPGSP*GPGIPG
Trigger: ACCTGGGATTCCAGGCCCCAAAGGGGAGCCGGGCCT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACGGGCTCGTTGTTCTaGAATAGAGCAACCCACACG +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYTGSLF*NRATHT
Trigger: CGTGTGGGTTGCTCTATTCAAGAACAACGAGCCCGT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGTATTGGCCTTTGATTaGTGCCGAGTACAGGATGAC +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKVLAFD*CRVQDD
Trigger: GTCATCCTGTACTCGGCACAAATCAAAGGCCAATAC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGGCTCGAAATGGGTCTTaGGTGTTTGGAGACCAGATT +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKARNGS*VFGDQI
Trigger: AATCTGGTCTCCAAACACCAAAGACCCATTTCGAGC...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS GCA 90 bp TTGACAGGACTGCTGAATCAAATCAAAGACCAATGTCCTTGCTGGTaGCTTCCTGTGACACCTCTGGGGCTGGTTTCTGTCTCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: LTGLLNQIKDQCPCW*LPVTPLGLVSVSSA
Trigger: TGCTGAAGAGACAGAAACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTTGATTTGATTCAGCAGTCCTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS GCA 90 bp ATTTCCTTCATATATTGGGGTAGGTGTGGATACTCTTTGCCATACTaGAAGTGGGGCATCTCCTTGCCCATGGCAAGGCCATCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: ISFIYWGRCGYSLPY*KWGISLPMARPSLA
Trigger: GGCCAAAGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCACACCTACCCCAATATATGAAGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS GCA 90 bp CCGGTTGAATTTCCTTCATATATTGGGGTAGGTGTGGATACTCTTTaGCATACTGCAAGTGGGGCATCTCCTTGCCCATGGCAAGGCCAT +
Preference number: 5 (lower is better)
Translates to: PVEFPSYIGVGVDTL*HTASGASPCPWQGH
Trigger: ATGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCACACCTACCCCAATATATGAAGGAAATTCAACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACATTTCTTTGCCTTTCTaGGGTACGGCTTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYISLPF*GTASLP
Trigger: GGGCAAGGAAGCCGTACCCAAGAAAGGCAAAGAAAT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCATGCCCCGGTCACCTTaGGGTCCTGGGAAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGMPRSP*GPGKPG
Trigger: ACCAGGCTTCCCAGGACCCAAAGGTGACCGGGGCAT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGATTATGGCTTGGATTTaGAAAGCTGACTTTGGCCGG +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKIMAWI*KADFGR
Trigger: CCGGCCAAAGTCAGCTTTCAAAATCCAAGCCATAAT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS TCA 90 bp TTGCCTTTCTTGGGTACGGCTTCCTTGCCCATTCTTGGCGCCGGTTaGATTTCCTTCATATATTGGGGTAGGTGTGGATACTCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: LPFLGTASLPILGAG*ISFIYWGRCGYSLP
Trigger: TGGCAAAGAGTATCCACACCTACCCCAATATATGAAGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCAAGAAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS GCA 90 bp TCCTGTGACACCTCTGGGGCTGGTTTCTGTCTCTTCAGCAGATGCTaGTCTGCCTTCACAACAGCTTCTTTCAGTTGTCTTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SCDTSGAGFCLFSRC*SAFTTASFSCLLFL
Trigger: CAAGAACAAAAGACAACTGAAAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACAGAAACCAGCCCCAGAGGTGTCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS CCA 90 bp TACTTGACAGGACTGCTGAATCAAATCAAAGACCAATGTCCTTGCTaGTGCCTTCCTGTGACACCTCTGGGGCTGGTTTCTGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: YLTGLLNQIKDQCPC*CLPVTPLGLVSVSS
Trigger: TGAAGAGACAGAAACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTTGATTTGATTCAGCAGTCCTGTCAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAAGGCATGTGAGGTACTaGCTGACCCAGGGGCTGGTA +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKRHVRY*LTQGLV
Trigger: TACCAGCCCCTGGGTCAGCAAGTACCTCACATGCCT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGTCCTCGATCACCCTTaGGTCCTGGTTGCCCTGGTA +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKVLDHP*VLVALV
Trigger: TACCAGGGCAACCAGGACCAAAGGGTGATCGAGGAC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGGCATCCCGAAGCCCTaGTCTCCTTTAGGACCCCGA +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGGIPKP*SPLGPR
Trigger: TCGGGGTCCTAAAGGAGACAAGGGCTTCGGGATGCC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCCTGTCACTCCTGGTTaGCCCACTCCTGGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGPVTPG*PTPGSP
Trigger: TGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAGG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATATCCCAGGAGGTCCTaGAACCCCCGGTACCCCAAT +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKYPRRS*NPRYPN
Trigger: ATTGGGGTACCGGGGGTTCAAGGACCTCCTGGGATA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAAGTCCTTGCTCCCCTTaGCCACCTGGAAATCCTGGC +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKSPCSP*PPGNPG
Trigger: GCCAGGATTTCCAGGTGGCAAAGGGGAGCAAGGACT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACTGCCCAGCTTCCCCCTaGGGCCCTATGGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNCPASP*GPMGPG
Trigger: GCCAGGTCCCATAGGGCCCAAGGGGGAAGCTGGGCA...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACAGGCCCGGCTCCCCTTaGGGGCCTGGAATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNRPGSP*GPGIPG
Trigger: ACCTGGGATTCCAGGCCCCAAAGGGGAGCCGGGCCT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS GCA 90 bp TTATACTTGACAGGACTGCTGAATCAAATCAAAGACCAATGTCCTTaGTGGTGCCTTCCTGTGACACCTCTGGGGCTGGTTTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: LYLTGLLNQIKDQCP*WCLPVTPLGLVSVS
Trigger: AGAGACAGAAACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTTGATTTGATTCAGCAGTCCTGTCAAGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGCCATCACATTTATACTaGACAGGACTGCTGAATCAA +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKPSHLY*TGLLNQ
Trigger: TTGATTCAGCAGTCCTGTCAAGTATAAATGTGATGG...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAGGCATGTGAGGTACTaGCTGACCCAGGGGCTGGTA +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGRHVRY*LTQGLV
Trigger: TACCAGCCCCTGGGTCAGCAAGTACCTCACATGCCT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAAGTGGGGCATCTCCTaGCCCATGGCAAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGKWGIS*PMARPS
Trigger: AGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTTGGGTACGGCTTCCTaGCCCATTCTTGGCGCCGGT +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILGTAS*PILGAG
Trigger: ACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCAA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGTCCTCGATCACCCTTaGGTCCTGGTTGCCCTGGTA +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGVLDHP*VLVALV
Trigger: TACCAGGGCAACCAGGACCAAAGGGTGATCGAGGAC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGGTCCTGGTAGTCCTTaGGGTCCTCGATCACCCTTT +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKGPGSP*GPRSPF
Trigger: AAAGGGTGATCGAGGACCCAAAGGACTACCAGGACC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCATGCCCCGGTCACCTTaGGGTCCTGGGAAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSMPRSP*GPGKPG
Trigger: ACCAGGCTTCCCAGGACCCAAAGGTGACCGGGGCAT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGTCCTTTCTCCCCTCTaGGTCCAAGAGCCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGVLSPL*VQEPQE
Trigger: TTCCTGGGGCTCTTGGACCAAGAGGGGAGAAAGGAC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCTTTCCTGGGAAGCCTaGAAGCCCTGGCTCACCCTT +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGLSWEA*KPWLTL
Trigger: AAGGGTGAGCCAGGGCTTCAAGGCTTCCCAGGAAAG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TCCCACTGGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGACCAAGTGTCAGTACTaGATACATAACTCTATCCCA +
Preference number: 5 (lower is better)
Translates to: SHWGGNTTGLPTIYSMSKTKCQY*IHNSIP
Trigger: TGGGATAGAGTTATGTATCAAGTACTGACACTTGGT...CTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTAGGCATGTGAGGTACTaGCTGACCCAGGGGCTGGTA +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIRHVRY*LTQGLV
Trigger: TACCAGCCCCTGGGTCAGCAAGTACCTCACATGCCT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTGTCCTCGATCACCCTTaGGTCCTGGTTGCCCTGGTA +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIVLDHP*VLVALV
Trigger: TACCAGGGCAACCAGGACCAAAGGGTGATCGAGGAC...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGGTCCTGGTAGTCCTTaGGGTCCTCGATCACCCTTT +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGGPGSP*GPRSPF
Trigger: AAAGGGTGATCGAGGACCCAAAGGACTACCAGGACC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTACCCCAATAGGGCCTaGTGGCCCAGGTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSYPNRA*WPRFSW
Trigger: CCAGGAGAACCTGGGCCACAAGGCCCTATTGGGGTA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGCCCCGGTCACCTTaGGGTCCTGGGAAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LTLEPQITYQFAYMLNREMPRSP*GPGKPG
Trigger: ACCAGGCTTCCCAGGACCCAAAGGTGACCGGGGCAT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCTTTCCTGGGAAGCCTaGAAGCCCTGGCTCACCCTT +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILSWEA*KPWLTL
Trigger: AAGGGTGAGCCAGGGCTTCAAGGCTTCCCAGGAAAG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAAGAGAGATATCCCTTaGACTAAAGCATTACCAGGG +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYKRDIP*TKALPG
Trigger: CCCTGGTAATGCTTTAGTCAAAGGGATATCTCTCTT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACAAACACAGGCTCTTGTaGCCCTTTGACATTCTACAT +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYKHRLL*PFDILH
Trigger: ATGTAGAATGTCAAAGGGCAACAAGAGCCTGTGTTT...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCTTTTCAGACTTGTATaGGCCTTTGATTTGTGCCGA +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYLFRLV*AFDLCR
Trigger: TCGGCACAAATCAAAGGCCAATACAAGTCTGAAAAG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS TCA 90 bp GCTCTTTGTCTTGTGAAGCCTTCCCATAGACAGCTGAAGCTGTTCTaGGCGAGGAACTGTATGGAAACGTCTTTCAGTTGTCTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: ALCLVKPSHRQLKLF*ARNCMETSFSCLLF
Trigger: GAACAAAAGACAACTGAAAGACGTTTCCATACAGTTCCTCGCTCAGAACAGCTTCAGCTGTCTATGGGAAGGCTTCACAAGACAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS TCA 90 bp TGCCCAATATGCTCACATTTCTTGGTCTCAAAGCTTCTCTTCGGCTaGGCACAATGCTGGCAACATATCTTTCTAGTGCATTCATCTCCC +
Preference number: 5 (lower is better)
Translates to: CPICSHFLVSKLLFG*AQCWQHIFLVHSSP
Trigger: GGGAGATGAATGCACTAGAAAGATATGTTGCCAGCATTGTGCTCAGCCGAAGAGAAGCTTTGAGACCAAGAAATGTGAGCATATTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS GCA 90 bp AACTGGCTAATGGTATTTCTTTGCCTTTCTTGGGTACGGCTTCCTTaGCCATTCTTGGCGCCGGTTGAATTTCCTTCATATATTGGGGTA +
Preference number: 5 (lower is better)
Translates to: NWLMVFLCLSWVRLP*PFLAPVEFPSYIGV
Trigger: TACCCCAATATATGAAGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCAAGAAAGGCAAAGAAATACCATTAGCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000621757.1
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCGCTGGTAACATGCACTaGGCTTTTATGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGAGNMH*AFMGRW
Trigger: CCACCTGCCCATAAAAGCCAAGTGCATGTTACCAGC...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR CAA 90 bp GGGGCGGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACCCATCACATTTATACTaGACAGGACTGCTGAATCAA +
Preference number: 5 (lower is better)
Translates to: GAVTLRVSPPYIPCQSIYPSHLY*TGLLNQ
Trigger: TTGATTCAGCAGTCCTGTCAAGTATAAATGTGATGG...GTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACCGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCTTCCTTGCCCATTCTaGGCGCCGGTTGAATTTCCT +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGLPCPF*APVEFP
Trigger: AGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAAG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACCCTGTCACTCCTGGTTaGCCCACTCCTGGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNPVTPG*PTPGSP
Trigger: TGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAGG...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATACCCCAATAGGGCCTaGTGGCCCAGGTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LTLEPQITYQFAYMLNREYPNRA*WPRFSW
Trigger: CCAGGAGAACCTGGGCCACAAGGCCCTATTGGGGTA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCAGTCCTTGCTCCCCTTaGCCACCTGGAAATCCTGGC +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSSPCSP*PPGNPG
Trigger: GCCAGGATTTCCAGGTGGCAAAGGGGAGCAAGGACT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTTTCCTGGGGCACCTATaGGTCCTTTCTCCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIFLGHL*VLSPLL
Trigger: CAAGAGGGGAGAAAGGACCAATAGGTGCCCCAGGAA...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATCCAGGAAGCCCTTTTaGTACTCGTCGTACGTGTAC +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKSRKPF*YSSYVY
Trigger: GTACACGTACGACGAGTACAAAAAGGGCTTCCTGGA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS GCA 90 bp CCAGAAAAATGGAGATCTACGCTACTATCTGGGAGAACTTCTAGATaGCCAATATGCTCACATTTCTTGGTCTCAAAGCTTCTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: PEKWRSTLLSGRTSR*PICSHFLVSKLLFG
Trigger: GCCGAAGAGAAGCTTTGAGACCAAGAAATGTGAGCATATTGGGCATCTAGAAGTTCTCCCAGATAGTAGCGTAGATCTCCATTTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CCA 90 bp TACTATCTGGGAGAACTTCTAGATGCCCAATATGCTCACATTTCTTaGTCTCAAAGCTTCTCTTCGGCTGAGCACAATGCTGGCAACATA +
Preference number: 5 (lower is better)
Translates to: YYLGELLDAQYAHIS*SQSFSSAEHNAGNI
Trigger: TATGTTGCCAGCATTGTGCTCAGCCGAAGAGAAGCTTTGAGACCAAGAAATGTGAGCATATTGGGCATCTAGAAGTTCTCCCAGATAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCATCTGAGGAGGAATTaGAGGTGGCAGCGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIHLRRN*RWQRLD
Trigger: ATCAAGCCGCTGCCACCTCAAATTCCTCCTCAGATG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCTGGTATTGTGGAATTaGTGGTGGCATCTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGLVLWN*WWHLRR
Trigger: CCTCCTCAGATGCCACCACAAATTCCACAATACCAG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCATTTCTTTGCCTTTCTaGGGTACGGCTTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGISLPF*GTASLP
Trigger: GGGCAAGGAAGCCGTACCCAAGAAAGGCAAAGAAAT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATATCCCAGGAGGTCCTaGAACCCCCGGTACCCCAAT +
Preference number: 5 (lower is better)
Translates to: LTLEPQITYQFAYMLNREYPRRS*NPRYPN
Trigger: ATTGGGGTACCGGGGGTTCAAGGACCTCCTGGGATA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGTCCTTTCTCCCCTCTaGGTCCAAGAGCCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNVLSPL*VQEPQE
Trigger: TTCCTGGGGCTCTTGGACCAAGAGGGGAGAAAGGAC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACCTTTCCTGGGAAGCCTaGAAGCCCTGGCTCACCCTT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNLSWEA*KPWLTL
Trigger: AAGGGTGAGCCAGGGCTTCAAGGCTTCCCAGGAAAG...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAATACATCACGGGCTCGTaGTTCTTGAATAGAGCAACC +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKYITGS*FLNRAT
Trigger: GGTTGCTCTATTCAAGAACAACGAGCCCGTGATGTA...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS TCA 90 bp ATTACATGCTGTATTGTGTCCAAGTCAGCATGGCCAAGCAGTGGTTaGGAAACAAACCAGCAGTTGTTTGAAAACTATCACTGGCCAATG +
Preference number: 5 (lower is better)
Translates to: ITCCIVSKSAWPSSG*ETNQQLFENYHWPM
Trigger: CATTGGCCAGTGATAGTTTTCAAACAACTGCTGGTTTGTTTCTCAACCACTGCTTGGCCATGCTGACTTGGACACAATACAGCATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CCA 90 bp CCTTGTAGGGATGTTGGGGAGACCAGTGAGATCATGTCTATAAAGTaGATTGACTGGAATGTGCTCATGTTGTCCAATGTGAATTATGCT +
Preference number: 5 (lower is better)
Translates to: PCRDVGETSEIMSIK*IDWNVLMLSNVNYA
Trigger: AGCATAATTCACATTGGACAACATGAGCACATTCCAGTCAATCCACTTTATAGACATGATCTCACTGGTCTCCCCAACATCCCTACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCTGGTATTGTGGAATTaGTGGTGGCATCTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCILVLWN*WWHLRR
Trigger: CCTCCTCAGATGCCACCACAAATTCCACAATACCAG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCTTCCTTGCCCATTCTaGGCGCCGGTTGAATTTCCT +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSLPCPF*APVEFP
Trigger: AGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAAG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCCCGTTATACAGCAGTTaGTTAAACTTCACTGGGGCC +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGPLYSS*LNFTGA
Trigger: GGCCCCAGTGAAGTTTAACAAACTGCTGTATAACGG...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCACGGGCTCGTTGTTCTaGAATAGAGCAACCCACACG +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSTGSLF*NRATHT
Trigger: CGTGTGGGTTGCTCTATTCAAGAACAACGAGCCCGT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAATTATGGCTTGGATTTaGAAAGCTGACTTTGGCCGG +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKIMAWI*KADFGR
Trigger: CCGGCCAAAGTCAGCTTTCAAAATCCAAGCCATAAT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCTGGTATTGTGGAATTaGTGGTGGCATCTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSLVLWN*WWHLRR
Trigger: CCTCCTCAGATGCCACCACAAATTCCACAATACCAG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACACCCAGGGGCTGGTATaGTGGAATTTGTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNTQGLV*WNLWWH
Trigger: ATGCCACCACAAATTCCACAATACCAGCCCCTGGGT...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAGGTGTGGATACTCTTaGCCATACTGCAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: LTLEPQITYQFAYMLNRERCGYS*PYCKWG
Trigger: GCCCCACTTGCAGTATGGCAAAGAGTATCCACACCT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCATTTCTTTGCCTTTCTaGGGTACGGCTTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSISLPF*GTASLP
Trigger: GGGCAAGGAAGCCGTACCCAAGAAAGGCAAAGAAAT...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAACGGGCTCGTTGTTCTaGAATAGAGCAACCCACACG +
Preference number: 5 (lower is better)
Translates to: LTLEPQITYQFAYMLNRETGSLF*NRATHT
Trigger: CGTGTGGGTTGCTCTATTCAAGAACAACGAGCCCGT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTGTATTGGCCTTTGATTaGTGCCGAGTACAGGATGAC +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIVLAFD*CRVQDD
Trigger: GTCATCCTGTACTCGGCACAAATCAAAGGCCAATAC...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCATGGGTCTTTGGTGTTaGGAGACCAGATTAGAATGC +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGMGLWC*ETRLEC
Trigger: GCATTCTAATCTGGTCTCCAAACACCAAAGACCCAT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAACATAACCCCACATTATaGCTCCAAGTGATAGAGTCA +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKHNPTL*LQVIES
Trigger: TGACTCTATCACTTGGAGCAATAATGTGGGGTTATG...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS TCA 90 bp ATAGACTGTGCAGGGACGGGTGAGTCTCACTTCTTAACTTCACGTTaGCACGTTTATGTTTGGCAAATTTCTAAGATCATGCAGAAACTT +
Preference number: 5 (lower is better)
Translates to: IDCAGTGESHFLTSR*HVYVWQISKIMQKL
Trigger: AAGTTTCTGCATGATCTTAGAAATTTGCCAAACATAAACGTGTCAACGTGAAGTTAAGAAGTGAGACTCACCCGTCCCTGCACAGTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474648.5
ENST00000483969.5
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCTACATCACGGGCTCGTaGTTCTTGAATAGAGCAACC +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSYITGS*FLNRAT
Trigger: GGTTGCTCTATTCAAGAACAACGAGCCCGTGATGTA...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATCCAGGAAGCCCTTTTaGTACTCGTCGTACGTGTAC +
Preference number: 5 (lower is better)
Translates to: LTLEPQITYQFAYMLNRESRKPF*YSSYVY
Trigger: GTACACGTACGACGAGTACAAAAAGGGCTTCCTGGA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAACCAAGTGTCAGTACTaGATACATAACTCTATCCCA +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKTKCQY*IHNSIP
Trigger: TGGGATAGAGTTATGTATCAAGTACTGACACTTGGT...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCAAGAGAGATATCCCTTaGACTAAAGCATTACCAGGG +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGKRDIP*TKALPG
Trigger: CCCTGGTAATGCTTTAGTCAAAGGGATATCTCTCTT...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGGCTCTTGTTGCCCTTaGACATTCTACATAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSGSCCP*TFYIAL
Trigger: AAGGGCTATGTAGAATGTCAAAGGGCAACAAGAGCC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGACTTGTATTGGCCTTaGATTTGTGCCGAGTACAGG +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSDLYWP*ICAEYR
Trigger: CCTGTACTCGGCACAAATCAAAGGCCAATACAAGTC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTATGGGTCTTTGGTGTTaGGAGACCAGATTAGAATGC +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIMGLWC*ETRLEC
Trigger: GCATTCTAATCTGGTCTCCAAACACCAAAGACCCAT...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GGTAACACTACGGGTCTCCCCACCATATATTCCATGTCAAAGTATCTACACAAAGTGGAGGACATCTTTTaGTTGGGAAAAGATTGTTGT +
Preference number: 5 (lower is better)
Translates to: GNTTGLPTIYSMSKYLHKVEDIF*LGKDCC
Trigger: ACAACAATCTTTTCCCAACAAAAAGATGTCCTCCAC...TTTGTGTAGATACTTTGACATGGAATATATGGTGGGGAGACCCGTAGTGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGGCTCTTGTTGCCCTTaGACATTCTACATAGCCCTT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNGSCCP*TFYIAL
Trigger: AAGGGCTATGTAGAATGTCAAAGGGCAACAAGAGCC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAGACTTGTATTGGCCTTaGATTTGTGCCGAGTACAGG +
Preference number: 5 (lower is better)
Translates to: LTLEPQITYQFAYMLNREDLYWP*ICAEYR
Trigger: CCTGTACTCGGCACAAATCAAAGGCCAATACAAGTC...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACGCTCGAAATGGGTCTTaGGTGTTTGGAGACCAGATT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNARNGS*VFGDQI
Trigger: AATCTGGTCTCCAAACACCAAAGACCCATTTCGAGC...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS CCA 90 bp AATAGGCCACTATTGGTGAATGAAATGCAGTTGTCTAACAATGACTaGAAACTCTATTATAGAAGGACAGAGGGAGACTTTCCACAACTT +
Preference number: 5 (lower is better)
Translates to: NRPLLVNEMQLSNND*KLYYRRTEGDFPQL
Trigger: AAGTTGTGGAAAGTCTCCCTCTGTCCTTCTATAATAGAGTTTCCAGTCATTGTTAGACAACTGCATTTCATTCACCAATAGTGGCCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS-3UTR CAA 90 bp AATCTGTCATGGGAACTCAAACAAGTTACCAGTCTGTTCACCGTTCATTGTATTCCATCACATTTATACTaGACAGGACTGCTGAATCAA +
Preference number: 5 (lower is better)
Translates to: NLSWELKQVTSLFTVHCIPSHLY*TGLLNQ
Trigger: TTGATTCAGCAGTCCTGTCAAGTATAAATGTGATGG...AATACAATGAACGGTGAACAGACTGGTAACTTGTTTGAGTTCCCATGACAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp ACCAAGTGTCAGTACTTGATACATAACTCTATCCCATCATTCGCAATTACAGGCTTCTGCTTTTCAGACTaGTATTGGCCTTTGATTTGT +
Preference number: 5 (lower is better)
Translates to: TKCQYLIHNSIPSFAITGFCFSD*YWPLIC
Trigger: ACAAATCAAAGGCCAATACAAGTCTGAAAAGCAGAA...GCCTGTAATTGCGAATGATGGGATAGAGTTATGTATCAAGTACTGACACTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCCATAACCCCACATTATaGCTCCAAGTGATAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSHNPTL*LQVIES
Trigger: TGACTCTATCACTTGGAGCAATAATGTGGGGTTATG...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACATATATATATATATATAGGCAATTGAGTGACAACCTTTTCAGACTTGTATaGGCCTTTGATTTGTGCCGA +
Preference number: 5 (lower is better)
Translates to: AHTHTHTYIYIYRQLSDNLFRLV*AFDLCR
Trigger: TCGGCACAAATCAAAGGCCAATACAAGTCTGAAAAG...GTTGTCACTCAATTGCCTATATATATATATATATGTGTGTGTGTGTGTGTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAATGTCCGTGGAGGACATCTTTTaGTTGGGAAAAGATTGTTGT +
Preference number: 5 (lower is better)
Translates to: LEPQITYQFAYMLNREMSVEDIF*LGKDCC
Trigger: ACAACAATCTTTTCCCAACAAAAAGATGTCCTCCAC...GGACATTTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAAAACAGCTTCTTTCAGTaGTCTTTTGTTCTTGAGATG +
Preference number: 5 (lower is better)
Translates to: LTLEPQITYQFAYMLNRENSFFQ*SFVLEM
Trigger: CATCTCAAGAACAAAAGACAACTGAAAGAAGCTGTT...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS-3UTR CAA 90 bp TTGACTTTGGAACCTCAGATTACATATCAGTTTGCATACATGCTAAACAGAGAATTCTGCTTTTCAGACTaGTATTGGCCTTTGATTTGT +
Preference number: 5 (lower is better)
Translates to: LTLEPQITYQFAYMLNREFCFSD*YWPLIC
Trigger: ACAAATCAAAGGCCAATACAAGTCTGAAAAGCAGAA...TTCTCTGTTTAGCATGTATGCAAACTGATATGTAATCTGAGGTTCCAAAGTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261037.7
ENST00000652472.1
CDS GCA 72 bp GGCCCTGGGGCCCAGGGAAGCCTGTCACTCCTGGTTTaGCCACTCCTGGCAGTCCAACAGGGCCGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: GPGAQGSLSLLV*PLLAVQQGREG
Trigger: GCCCTCCCGGCCCTGTTGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAGGCTTCCCTGGGCCCCAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CAA 72 bp GGGCCCTGGGGCCCAGGGAAGCCTGTCACTCCTGGTTaGCCCACTCCTGGCAGTCCAACAGGGCCGGGAGGG +
Preference number: 6 (lower is better)
Translates to: GPWGPGKPVTPG*PTPGSPTGPGG
Trigger: CCCTCCCGGCCCTGTTGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAGGCTTCCCTGGGCCCCAGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CAA 90 bp TTTCCCAGGGGGCCCTGGGGCCCAGGGAAGCCTGTCACTCCTGGTTaGCCCACTCCTGGCAGTCCAACAGGGCCGGGAGGGCCGTGCATC +
Preference number: 6 (lower is better)
Translates to: FPRGPWGPGKPVTPG*PTPGSPTGPGGPCI
Trigger: GATGCACGGCCCTCCCGGCCCTGTTGGACTGCCAGGAGTGGGCAAACCAGGAGTGACAGGCTTCCCTGGGCCCCAGGGCCCCCTGGGAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 72 bp TGGCAGTCCAACAGGGCCGGGAGGGCCGTGCATCCCTaGAGGCCCCTTTACACCTGGCGCACCTGGCATCCC +
Preference number: 6 (lower is better)
Translates to: WQSNRAGRAVHP*RPLYTWRTWHP
Trigger: GGGATGCCAGGTGCGCCAGGTGTAAAGGGGCCTCCAGGGATGCACGGCCCTCCCGGCCCTGTTGGACTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 72 bp AGGCTGGCCTTGAGGACCAAGGGCACCAGGCTTCCCTaGGGGGCCATGAAGTCCTGCCACTCCGGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: RLALRTKGTRLP*GAMKSCHSGFP
Trigger: GGGAAACCCGGAGTGGCAGGACTTCATGGCCCCCCAGGGAAGCCTGGTGCCCTTGGTCCTCAAGGCCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 72 bp GGGAGGGCCGTGCATCCCTGGAGGCCCCTTTACACCTaGCGCACCTGGCATCCCGAAGCCCTTGTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: GRAVHPWRPLYT*RTWHPEALVSF
Trigger: AAAGGAGACAAGGGCTTCGGGATGCCAGGTGCGCCAGGTGTAAAGGGGCCTCCAGGGATGCACGGCCCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 72 bp TGGGAAGCCTTGAAGCCCTGGCTCACCCTTGGGACCTaGTGGCCCCTGTGGCCCTACAATCCCACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: WEALKPWLTLGT*WPLWPYNPTFS
Trigger: GGAGAAGGTGGGATTGTAGGGCCACAGGGGCCACCAGGTCCCAAGGGTGAGCCAGGGCTTCAAGGCTTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 72 bp AAGGAAACCTGGCTTTCCTGGGAAGCCTTGAAGCCCTaGCTCACCCTTGGGACCTGGTGGCCCCTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: KETWLSWEALKP*LTLGTWWPLWP
Trigger: GGGCCACAGGGGCCACCAGGTCCCAAGGGTGAGCCAGGGCTTCAAGGCTTCCCAGGAAAGCCAGGTTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CAA 90 bp CCCATCCTGGCCTGGCTTTCCAATTCCGGGTATCCCAGGAGGTCCTaGAACCCCCGGTACCCCAATAGGGCCTTGTGGCCCAGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: PILAWLSNSGYPRRS*NPRYPNRALWPRFS
Trigger: GGAGAACCTGGGCCACAAGGCCCTATTGGGGTACCGGGGGTTCAAGGACCTCCTGGGATACCCGGAATTGGAAAGCCAGGCCAGGATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CAA 72 bp GCCTGGCTTTCCAATTCCGGGTATCCCAGGAGGTCCTaGAACCCCCGGTACCCCAATAGGGCCTTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: AWLSNSGYPRRS*NPRYPNRALWP
Trigger: GGGCCACAAGGCCCTATTGGGGTACCGGGGGTTCAAGGACCTCCTGGGATACCCGGAATTGGAAAGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS TCA 72 bp CCTGGCTTTCCAATTCCGGGTATCCCAGGAGGTCCTTaGACCCCCGGTACCCCAATAGGGCCTTGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: PGFPIPGIPGGP*TPGTPIGPCGP
Trigger: TGGGCCACAAGGCCCTATTGGGGTACCGGGGGTTCAAGGACCTCCTGGGATACCCGGAATTGGAAAGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 72 bp TCCCTTGAGCACGTAAGATCAGGGAGAGAGGCTCGCTaGCTCCCACGGAGAGGATCGGGGAAGGGCTGTGAT +
Preference number: 6 (lower is better)
Translates to: SLEHVRSGREAR*LPRRGSGKGCD
Trigger: ATCACAGCCCTTCCCCGATCCTCTCCGTGGGAGCCAGCGAGCCTCTCTCCCTGATCTTACGTGCTCAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261037.7
ENST00000463753.5
ENST00000474648.5
ENST00000483969.5
CDS CCA 72 bp GAAGCCTTGAAGCCCTGGCTCACCCTTGGGACCTGGTaGCCCCTGTGGCCCTACAATCCCACCTTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: EALKPWLTLGTW*PLWPYNPTFSF
Trigger: AAAGGAGAAGGTGGGATTGTAGGGCCACAGGGGCCACCAGGTCCCAAGGGTGAGCCAGGGCTTCAAGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 72 bp CTTAGGTCCGAGAAGCCCTGGAACACCAGGGAGTCCTaGTACACCTTTTTGCCCAGCTTCCCCCTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: LRSEKPWNTRES*YTFLPSFPLGP
Trigger: GGGCCCAAGGGGGAAGCTGGGCAAAAAGGTGTACCAGGACTCCCTGGTGTTCCAGGGCTTCTCGGACCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 72 bp CCGGGCCTGAGCAGCAGCACTGCACTCCCAGATGCCTaGTCCAGGAAGCCCTTTTTGTACTCGTCGTACGTG +
Preference number: 6 (lower is better)
Translates to: PGLSSSTALPDA*SRKPFLYSSYV
Trigger: CACGTACGACGAGTACAAAAAGGGCTTCCTGGACCAGGCATCTGGGAGTGCAGTGCTGCTGCTCAGGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS TCA 72 bp CCGAAGCCCTTGTCTCCTTTAGGACCCCGAAGGCCTTaGGGTCCTGGTAGTCCTTTGGGTCCTCGATCACCC +
Preference number: 6 (lower is better)
Translates to: PKPLSPLGPRRP*GPGSPLGPRSP
Trigger: GGGTGATCGAGGACCCAAAGGACTACCAGGACCTCAAGGCCTTCGGGGTCCTAAAGGAGACAAGGGCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS GCA 72 bp GGATCGGGGAAGGGCTGTGATCCGCTGCTGGTAACATaGACTTGGCTTTTATGGGCAGGTGGGAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: GSGKGCDPLLVT*TWLLWAGGRSC
Trigger: GCAGCTCCTCCCACCTGCCCATAAAAGCCAAGTGCATGTTACCAGCAGCGGATCACAGCCCTTCCCCGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000452013.5
ENST00000463753.5
ENST00000474648.5
ENST00000483969.5
CDS GCA 72 bp GTCTCCGGGCCTGAGCAGCAGCACTGCACTCCCAGATaGCTGGTCCAGGAAGCCCTTTTTGTACTCGTCGTA +
Preference number: 6 (lower is better)
Translates to: VSGPEQQHCTPR*LVQEALFVLVV
Trigger: TACGACGAGTACAAAAAGGGCTTCCTGGACCAGGCATCTGGGAGTGCAGTGCTGCTGCTCAGGCCCGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS CCA 72 bp CTTCTTGAGCACGTAAGATCAGGGAGAGAGGCTCGCTaGCTCCCACGGAGAGGATCGGGGAAGGGCTGTGAT +
Preference number: 6 (lower is better)
Translates to: LLEHVRSGREAR*LPRRGSGKGCD
Trigger: ATCACAGCCCTTCCCCGATCCTCTCCGTGGGAGCCAGCGAGCCTCTCTCCCTGATCTTACGTGCTCAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273342.8
ENST00000452013.5
ENST00000652472.1
CDS CAA 90 bp TTGGGACCTGGTGGCCCCTGTGGCCCTACAATCCCACCTTCTCCTTaGGGTCCAGGAAAACCAATAGCACCTGGAGGGCCCATAGGACCT +
Preference number: 6 (lower is better)
Translates to: LGPGGPCGPTIPPSP*GPGKPIAPGGPIGP
Trigger: AGGTCCTATGGGCCCTCCAGGTGCTATTGGTTTTCCTGGACCCAAAGGAGAAGGTGGGATTGTAGGGCCACAGGGGCCACCAGGTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000652472.1
CDS TCA 72 bp TCGCTGGCTCCCACGGAGAGGATCGGGGAAGGGCTGTaGTCCGCTGCTGGTAACATGCACTTGGCTTTTATG +
Preference number: 6 (lower is better)
Translates to: SLAPTERIGEGL*SAAGNMHLAFM
Trigger: CATAAAAGCCAAGTGCATGTTACCAGCAGCGGATCACAGCCCTTCCCCGATCCTCTCCGTGGGAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000452013.5
ENST00000463753.5
ENST00000474648.5
ENST00000483969.5
CDS CCA 72 bp GGGAAGGGCTGTGATCCGCTGCTGGTAACATGCACTTaGCTTTTATGGGCAGGTGGGAGGAGCTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: GKGCDPLLVTCT*LLWAGGRSCSS
Trigger: TGAGGAGCAGCTCCTCCCACCTGCCCATAAAAGCCAAGTGCATGTTACCAGCAGCGGATCACAGCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000452013.5
ENST00000463753.5
ENST00000474648.5
ENST00000483969.5
CDS GCA 72 bp GACACCTCTGGGGCTGGTTTCTGTCTCTTCAGCAGATaGTGCTCTGCCTTCACAACAGCTTCTGGGGGTCTT +
Preference number: 6 (lower is better)
Translates to: DTSGAGFCLFSR*CSAFTTASGGL
Trigger: AAGACCCCCAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACAGAAACCAGCCCCAGAGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621757.1
CDS CCA 72 bp TTCCACCCACTCACAGCCACAAGTGGGAGTGAAGGATaGGCTTTTGACCTAAGGGTGGAGCCATACTGGTCC +
Preference number: 6 (lower is better)
Translates to: FHPLTATSGSEG*AFDLRVEPYWS
Trigger: GGACCAGTATGGCTCCACCCTTAGGTCAAAAGCCCATCCTTCACTCCCACTTGTGGCTGTGAGTGGGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CAA 90 bp CTTGCCCATGGCAAGGCCATCTTTGGCCAAAGGCATGTGAGGTACTaGCTGACCCAGGGGCTGGTATTGTGGAATTTGTGGTGGCATCTG +
Preference number: 6 (lower is better)
Translates to: LAHGKAIFGQRHVRY*LTQGLVLWNLWWHL
Trigger: CAGATGCCACCACAAATTCCACAATACCAGCCCCTGGGTCAGCAAGTACCTCACATGCCTTTGGCCAAAGATGGCCTTGCCATGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS GCA 72 bp ACCTCTGGGGCTGGTTTCTGTCTCTTCAGCAGATGCTaGTCTGCCTTCACAACAGCTTCTGTGGCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: TSGAGFCLFSRC*SAFTTASVASV
Trigger: AACAGAGGCCACAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACAGAAACCAGCCCCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462604.1
CDS GCA 72 bp AGTGTAAAGGTTAATAGCATGACCTCCAGAGCCGGCTaGCAGGGCTGTTCTCCTGGCTCTGCAATTCACCGT +
Preference number: 6 (lower is better)
Translates to: SVKVNSMTSRAG*QGCSPGSAIHR
Trigger: ACGGTGAATTGCAGAGCCAGGAGAACAGCCCTGGCAGCCGGCTCTGGAGGTCATGCTATTAACCTTTACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474648.5
CDS CCA 72 bp TGGAATTTGTGGTGGCATCTGAGGAGGAATTTGAGGTaGCAGCGGCTTGATCCCATAGTAGGCACCAGCCTG +
Preference number: 6 (lower is better)
Translates to: WNLWWHLRRNLR*QRLDPIVGTSL
Trigger: CAGGCTGGTGCCTACTATGGGATCAAGCCGCTGCCACCTCAAATTCCTCCTCAGATGCCACCACAAATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 72 bp CTTTGCCATACTGCAAGTGGGGCATCTCCTTGCCCATaGCAAGGCCATCTTTGGCCAAAGGCATGTGAGGTA +
Preference number: 6 (lower is better)
Translates to: LCHTASGASPCP*QGHLWPKACEV
Trigger: TACCTCACATGCCTTTGGCCAAAGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 72 bp TGGGGTAGGTGTGGATACTCTTTGCCATACTGCAAGTaGGGCATCTCCTTGCCCATGGCAAGGCCATCTTTG +
Preference number: 6 (lower is better)
Translates to: WGRCGYSLPYCK*GISLPMARPSL
Trigger: CAAAGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCACACCTACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 72 bp GGCAAGGCCATCTTTGGCCAAAGGCATGTGAGGTACTaGCTGACCCAGGGGCTGGTATTGTGGAATTTGTGG +
Preference number: 6 (lower is better)
Translates to: GKAIFGQRHVRY*LTQGLVLWNLW
Trigger: CCACAAATTCCACAATACCAGCCCCTGGGTCAGCAAGTACCTCACATGCCTTTGGCCAAAGATGGCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 72 bp GGATACTCTTTGCCATACTGCAAGTGGGGCATCTCCTaGCCCATGGCAAGGCCATCTTTGGCCAAAGGCATG +
Preference number: 6 (lower is better)
Translates to: GYSLPYCKWGIS*PMARPSLAKGM
Trigger: CATGCCTTTGGCCAAAGATGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 90 bp CAGGGGCTGGTATTGTGGAATTTGTGGTGGCATCTGAGGAGGAATTaGAGGTGGCAGCGGCTTGATCCCATAGTAGGCACCAGCCTGAAT +
Preference number: 6 (lower is better)
Translates to: QGLVLWNLWWHLRRN*RWQRLDPIVGTSLN
Trigger: ATTCAGGCTGGTGCCTACTATGGGATCAAGCCGCTGCCACCTCAAATTCCTCCTCAGATGCCACCACAAATTCCACAATACCAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 90 bp AGGCATGTGAGGTACTTGCTGACCCAGGGGCTGGTATTGTGGAATTaGTGGTGGCATCTGAGGAGGAATTTGAGGTGGCAGCGGCTTGAT +
Preference number: 6 (lower is better)
Translates to: RHVRYLLTQGLVLWN*WWHLRRNLRWQRLD
Trigger: ATCAAGCCGCTGCCACCTCAAATTCCTCCTCAGATGCCACCACAAATTCCACAATACCAGCCCCTGGGTCAGCAAGTACCTCACATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS TCA 72 bp GGGCTGTTCTCCTGGCTCTGCAATTCACCGTCTGTGTaGCTTCTCCGTTTCAGTTTTGTCATCTGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: GLFSWLCNSPSV*LLRFSFVIWGS
Trigger: AGACCCCCAGATGACAAAACTGAAACGGAGAAGTCACACAGACGGTGAATTGCAGAGCCAGGAGAACAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474648.5
CDS GCA 72 bp TGGGGCTGGTTTCTGTCTCTTCAGCAGATGCTGCTCTaGCTTCACAACAGCTTCTGTGGCCTCTGTTTCACA +
Preference number: 6 (lower is better)
Translates to: WGWFLSLQQMLL*LHNSFCGLCFT
Trigger: TGTGAAACAGAGGCCACAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACAGAAACCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462604.1
CDS GCA 72 bp ACCTCTGGGGCTGGTTTCTGTCTCTTCAGCAGATGCTaGTCTGCCTTCACAACAGCTTCTGGGGGTCTTATA +
Preference number: 6 (lower is better)
Translates to: TSGAGFCLFSRC*SAFTTASGGLI
Trigger: TATAAGACCCCCAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACAGAAACCAGCCCCAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621757.1
CDS CAA 72 bp GACAGGACTGCTGAATCAAATCAAAGACCAATGTCCTaGCTGGTGCCTTCCTGTGACACCTCTGGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: DRTAESNQRPMS*LVPSCDTSGAG
Trigger: ACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTTGATTTGATTCAGCAGTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 72 bp AGGTACTTGCTGACCCAGGGGCTGGTATTGTGGAATTaGTGGTGGCATCTGAGGAGGAATTTGAGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: RYLLTQGLVLWN*WWHLRRNLRWQ
Trigger: CTGCCACCTCAAATTCCTCCTCAGATGCCACCACAAATTCCACAATACCAGCCCCTGGGTCAGCAAGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 90 bp TTTGGCCAAAGGCATGTGAGGTACTTGCTGACCCAGGGGCTGGTATaGTGGAATTTGTGGTGGCATCTGAGGAGGAATTTGAGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: FGQRHVRYLLTQGLV*WNLWWHLRRNLRWQ
Trigger: CTGCCACCTCAAATTCCTCCTCAGATGCCACCACAAATTCCACAATACCAGCCCCTGGGTCAGCAAGTACCTCACATGCCTTTGGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS GCA 72 bp CTGCTGAATCAAATCAAAGACCAATGTCCTTGCTGGTaGCTTCCTGTGACACCTCTGGGGCTGGTTTCTGTC +
Preference number: 6 (lower is better)
Translates to: LLNQIKDQCPCW*LPVTPLGLVSV
Trigger: GACAGAAACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTTGATTTGATTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS GCA 72 bp ACAGGACTGCTGAATCAAATCAAAGACCAATGTCCTTaGTGGTGCCTTCCTGTGACACCTCTGGGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: TGLLNQIKDQCP*WCLPVTPLGLV
Trigger: AACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTTGATTTGATTCAGCAGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS GCA 72 bp ATATATTGGGGTAGGTGTGGATACTCTTTGCCATACTaGAAGTGGGGCATCTCCTTGCCCATGGCAAGGCCA +
Preference number: 6 (lower is better)
Translates to: IYWGRCGYSLPY*KWGISLPMARP
Trigger: TGGCCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCACACCTACCCCAATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 72 bp GGACTGCTGAATCAAATCAAAGACCAATGTCCTTGCTaGTGCCTTCCTGTGACACCTCTGGGGCTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: GLLNQIKDQCPC*CLPVTPLGLVS
Trigger: AGAAACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTTGATTTGATTCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 72 bp CATGTGAGGTACTTGCTGACCCAGGGGCTGGTATTGTaGAATTTGTGGTGGCATCTGAGGAGGAATTTGAGG +
Preference number: 6 (lower is better)
Translates to: HVRYLLTQGLVL*NLWWHLRRNLR
Trigger: CCTCAAATTCCTCCTCAGATGCCACCACAAATTCCACAATACCAGCCCCTGGGTCAGCAAGTACCTCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS TCA 72 bp TTGGGTACGGCTTCCTTGCCCATTCTTGGCGCCGGTTaGATTTCCTTCATATATTGGGGTAGGTGTGGATAC +
Preference number: 6 (lower is better)
Translates to: LGTASLPILGAG*ISFIYWGRCGY
Trigger: GTATCCACACCTACCCCAATATATGAAGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS GCA 72 bp ACCTCTGGGGCTGGTTTCTGTCTCTTCAGCAGATGCTaGTCTGCCTTCACAACAGCTTCTTTCAGTTGTCTT +
Preference number: 6 (lower is better)
Translates to: TSGAGFCLFSRC*SAFTTASFSCL
Trigger: AAGACAACTGAAAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACAGAAACCAGCCCCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS GCA 72 bp TTTCCTTCATATATTGGGGTAGGTGTGGATACTCTTTaGCATACTGCAAGTGGGGCATCTCCTTGCCCATGG +
Preference number: 6 (lower is better)
Translates to: FPSYIGVGVDTL*HTASGASPCPW
Trigger: CCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCACACCTACCCCAATATATGAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 72 bp CTTTGCCTTTCTTGGGTACGGCTTCCTTGCCCATTCTaGGCGCCGGTTGAATTTCCTTCATATATTGGGGTA +
Preference number: 6 (lower is better)
Translates to: LCLSWVRLPCPF*APVEFPSYIGV
Trigger: TACCCCAATATATGAAGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCAAGAAAGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 90 bp TTTATACTTGACAGGACTGCTGAATCAAATCAAAGACCAATGTCCTaGCTGGTGCCTTCCTGTGACACCTCTGGGGCTGGTTTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: FILDRTAESNQRPMS*LVPSCDTSGAGFCL
Trigger: GAGACAGAAACCAGCCCCAGAGGTGTCACAGGAAGGCACCAGCAAGGACATTGGTCTTTGATTTGATTCAGCAGTCCTGTCAAGTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 90 bp ATGGTATTTCTTTGCCTTTCTTGGGTACGGCTTCCTTGCCCATTCTaGGCGCCGGTTGAATTTCCTTCATATATTGGGGTAGGTGTGGAT +
Preference number: 6 (lower is better)
Translates to: MVFLCLSWVRLPCPF*APVEFPSYIGVGVD
Trigger: ATCCACACCTACCCCAATATATGAAGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCAAGAAAGGCAAAGAAATACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 90 bp GGGCCAAGGAGGAAAATATCCCAGGCACTTTTATTACATGCTGTATaGTGTCCAAGTCAGCATGGCCAAGCAGTGGTTGAGAAACAAACC +
Preference number: 6 (lower is better)
Translates to: GPRRKISQALLLHAV*CPSQHGQAVVEKQT
Trigger: GGTTTGTTTCTCAACCACTGCTTGGCCATGCTGACTTGGACACAATACAGCATGTAATAAAAGTGCCTGGGATATTTTCCTCCTTGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS GCA 72 bp TGGGGCTGGTTTCTGTCTCTTCAGCAGATGCTGCTCTaGCTTCACAACAGCTTCTTTCAGTTGTCTTTTGTT +
Preference number: 6 (lower is better)
Translates to: WGWFLSLQQMLL*LHNSFFQLSFV
Trigger: AACAAAAGACAACTGAAAGAAGCTGTTGTGAAGGCAGAGCAGCATCTGCTGAAGAGACAGAAACCAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261037.7
CDS CAA 72 bp ATTTCCTTCATATATTGGGGTAGGTGTGGATACTCTTaGCCATACTGCAAGTGGGGCATCTCCTTGCCCATG +
Preference number: 6 (lower is better)
Translates to: ISFIYWGRCGYS*PYCKWGISLPM
Trigger: CATGGGCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCACACCTACCCCAATATATGAAGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CAA 72 bp CTGGCCAATGACTCAGCCCCCAACATTTCAGACAAGTaGTTTTGGGAATTGTATGGCCTCAAGCAGGGAAAA +
Preference number: 6 (lower is better)
Translates to: LANDSAPNISDK*FWELYGLKQGK
Trigger: TTTTCCCTGCTTGAGGCCATACAATTCCCAAAACAACTTGTCTGAAATGTTGGGGGCTGAGTCATTGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS GCA 72 bp ATGGTATTTCTTTGCCTTTCTTGGGTACGGCTTCCTTaGCCATTCTTGGCGCCGGTTGAATTTCCTTCATAT +
Preference number: 6 (lower is better)
Translates to: MVFLCLSWVRLP*PFLAPVEFPSY
Trigger: ATATGAAGGAAATTCAACCGGCGCCAAGAATGGGCAAGGAAGCCGTACCCAAGAAAGGCAAAGAAATACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261037.7
ENST00000273342.8
ENST00000452013.5
ENST00000621757.1
ENST00000652472.1
CDS CCA 72 bp GGAGAACTTCTAGATGCCCAATATGCTCACATTTCTTaGTCTCAAAGCTTCTCTTCGGCTGAGCACAATGCT +
Preference number: 6 (lower is better)
Translates to: GELLDAQYAHIS*SQSFSSAEHNA
Trigger: AGCATTGTGCTCAGCCGAAGAGAAGCTTTGAGACCAAGAAATGTGAGCATATTGGGCATCTAGAAGTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CAA 90 bp TTCAAGTCTCTCTGCCAGCACACTCTGGGTAATTCACTTTTGGTTTaGTGTAAATGGCCAAGTCCTAGCTCTTTGTCTTGTGAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: FKSLCQHTLGNSLLV*CKWPSPSSLSCEAF
Trigger: GAAGGCTTCACAAGACAAAGAGCTAGGACTTGGCCATTTACACAAAACCAAAAGTGAATTACCCAGAGTGTGCTGGCAGAGAGACTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS TCA 72 bp TGCTCACATTTCTTGGTCTCAAAGCTTCTCTTCGGCTaGGCACAATGCTGGCAACATATCTTTCTAGTGCAT +
Preference number: 6 (lower is better)
Translates to: CSHFLVSKLLFG*AQCWQHIFLVH
Trigger: ATGCACTAGAAAGATATGTTGCCAGCATTGTGCTCAGCCGAAGAGAAGCTTTGAGACCAAGAAATGTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CCA 72 bp GATGTTGGGGAGACCAGTGAGATCATGTCTATAAAGTaGATTGACTGGAATGTGCTCATGTTGTCCAATGTG +
Preference number: 6 (lower is better)
Translates to: DVGETSEIMSIK*IDWNVLMLSNV
Trigger: CACATTGGACAACATGAGCACATTCCAGTCAATCCACTTTATAGACATGATCTCACTGGTCTCCCCAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CAA 72 bp CTCTGCCAGCACACTCTGGGTAATTCACTTTTGGTTTaGTGTAAATGGCCAAGTCCTAGCTCTTTGTCTTGT +
Preference number: 6 (lower is better)
Translates to: LCQHTLGNSLLV*CKWPSPSSLSC
Trigger: ACAAGACAAAGAGCTAGGACTTGGCCATTTACACAAAACCAAAAGTGAATTACCCAGAGTGTGCTGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CAA 72 bp AAGTCTCTCTGCCAGCACACTCTGGGTAATTCACTTTaGGTTTTGTGTAAATGGCCAAGTCCTAGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: KSLCQHTLGNSL*VLCKWPSPSSL
Trigger: CAAAGAGCTAGGACTTGGCCATTTACACAAAACCAAAAGTGAATTACCCAGAGTGTGCTGGCAGAGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CAA 72 bp TTTCTAGTGCATTCATCTCCCCTTCCGTATTCACCATaGTCTTTCCTTCTAAAAGTCTTCTCTGGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: FLVHSSPLPYSP*SFLLKVFSGPR
Trigger: CCTTGGCCCAGAGAAGACTTTTAGAAGGAAAGACAATGGTGAATACGGAAGGGGAGATGAATGCACTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS TCA 72 bp GCAGGGACGGGTGAGTCTCACTTCTTAACTTCACGTTaGCACGTTTATGTTTGGCAAATTTCTAAGATCATG +
Preference number: 6 (lower is better)
Translates to: AGTGESHFLTSR*HVYVWQISKIM
Trigger: CATGATCTTAGAAATTTGCCAAACATAAACGTGTCAACGTGAAGTTAAGAAGTGAGACTCACCCGTCCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474648.5
ENST00000483969.5
CDS GCA 72 bp TGGAGATCTACGCTACTATCTGGGAGAACTTCTAGATaGCCAATATGCTCACATTTCTTGGTCTCAAAGCTT +
Preference number: 6 (lower is better)
Translates to: WRSTLLSGRTSR*PICSHFLVSKL
Trigger: AAGCTTTGAGACCAAGAAATGTGAGCATATTGGGCATCTAGAAGTTCTCCCAGATAGTAGCGTAGATCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CCA 72 bp CACACTCTGGGTAATTCACTTTTGGTTTTGTGTAAATaGCCAAGTCCTAGCTCTTTGTCTTGTGAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: HTLGNSLLVLCK*PSPSSLSCEAF
Trigger: GAAGGCTTCACAAGACAAAGAGCTAGGACTTGGCCATTTACACAAAACCAAAAGTGAATTACCCAGAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CAA 90 bp CTTACATTCAAGTCTCTCTGCCAGCACACTCTGGGTAATTCACTTTaGGTTTTGTGTAAATGGCCAAGTCCTAGCTCTTTGTCTTGTGAA +
Preference number: 6 (lower is better)
Translates to: LTFKSLCQHTLGNSL*VLCKWPSPSSLSCE
Trigger: TTCACAAGACAAAGAGCTAGGACTTGGCCATTTACACAAAACCAAAAGTGAATTACCCAGAGTGTGCTGGCAGAGAGACTTGAATGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CAA 90 bp TGGAAAACTAATAACAAAATCTGGGTTCTGTTCCTAATTAGCTGTTaGGTTTCAGGAAATCAACTTTACCTCTCTGGGCCTCAGTTACCT +
Preference number: 6 (lower is better)
Translates to: WKTNNKIWVLFLISC*VSGNQLYLSGPQLP
Trigger: AGGTAACTGAGGCCCAGAGAGGTAAAGTTGATTTCCTGAAACCAAACAGCTAATTAGGAACAGAACCCAGATTTTGTTATTAGTTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483969.5
CDS CCA 72 bp CAACAACAAACAACAACAACAAACAACCCAGAAAAATaGAGATCTACGCTACTATCTGGGAGAACTTCTAGA +
Preference number: 6 (lower is better)
Translates to: QQQTTTTNNPEK*RSTLLSGRTSR
Trigger: TCTAGAAGTTCTCCCAGATAGTAGCGTAGATCTCCATTTTTCTGGGTTGTTTGTTGTTGTTGTTTGTTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CAA 72 bp ACTGTTTCTCCTGTTGATGATTTCAATAGGCCACTATaGGTGAATGAAATGCAGTTGTCTAACAATGACTGG +
Preference number: 6 (lower is better)
Translates to: TVSPVDDFNRPL*VNEMQLSNNDW
Trigger: CCAGTCATTGTTAGACAACTGCATTTCATTCACCAATAGTGGCCTATTGAAATCATCAACAGGAGAAACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS CAA 72 bp AATAACAAAATCTGGGTTCTGTTCCTAATTAGCTGTTaGGTTTCAGGAAATCAACTTTACCTCTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: NNKIWVLFLISC*VSGNQLYLSGP
Trigger: AGGCCCAGAGAGGTAAAGTTGATTTCCTGAAACCAAACAGCTAATTAGGAACAGAACCCAGATTTTGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483969.5
CDS CAA 90 bp TTCCTAGGCTTTGACAATTACCTAATGAGTATTTTCAAGCACATCTaGGACTTGGAAGATTGCAACCTTGGCTCAGAAAGAAACAATCTT +
Preference number: 6 (lower is better)
Translates to: FLGFDNYLMSIFKHI*DLEDCNLGSERNNL
Trigger: AAGATTGTTTCTTTCTGAGCCAAGGTTGCAATCTTCCAAGTCCAAGATGTGCTTGAAAATACTCATTAGGTAATTGTCAAAGCCTAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463753.5
CDS TCA 72 bp TTTCTCCTGTTGATGATTTCAATAGGCCACTATTGGTaGATGAAATGCAGTTGTCTAACAATGACTGGAAAC +
Preference number: 6 (lower is better)
Translates to: FLLLMISIGHYW*MKCSCLTMTGN
Trigger: GTTTCCAGTCATTGTTAGACAACTGCATTTCATTCACCAATAGTGGCCTATTGAAATCATCAACAGGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463753.5