RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL6A6 (Homo sapiens)

Ensembl gene IDs: ENSG00000206384

Ensembl transcript IDs: ENST00000358511.10, ENST00000506143.5, ENST00000511332.1

Found 624 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTaGCTAACAGGGCCATTGCTACCAACTGTGGAGCCAGCTCTTAGA +
Preference number: 1 (lower is better)
Translates to: ASRQGFFPFPKRGTV*LTGPLLPTVEPALR
Trigger: TCTAAGAGCTGGCTCCACAGTTGGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR GCA 90 bp CTGGTATGTAGTCGGCCCCGGAGGGAACCACTATTACTTGAAATGTaGCAGTGTCGTCAATCATGCCTGCCAGGACTGCGGTCTCGCACA +
Preference number: 1 (lower is better)
Translates to: LVCSRPRREPLLLEM*QCRQSCLPGLRSRT
Trigger: TGTGCGAGACCGCAGTCCTGGCAGGCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCGACTACATACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR CCA 90 bp AGCAGATATCATTTTGCCTCTAGCTCCCTTCAGCCCAGTCTCTCCTaGACCACCAGGGTCCCCAATCTCACCCTTAGGTCCACTTTCTCC +
Preference number: 1 (lower is better)
Translates to: SRYHFASSSLQPSLS*TTRVPNLTLRSTFS
Trigger: GGAGAAAGTGGACCTAAGGGTGAGATTGGGGACCCTGGTGGTCCAGGAGAGACTGGGCTGAAGGGAGCTAGAGGCAAAATGATATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR GCA 90 bp GAAAGAAAATCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATaGATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGT +
Preference number: 1 (lower is better)
Translates to: ERKSECPWCQYPSAP*IQAGLLSIPKEGDS
Trigger: ACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGATTTTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR TCA 90 bp CGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTaGTCTAATAGTGCTCCAAGGAAGGCTCTTATGTCTTCAAATTCA +
Preference number: 1 (lower is better)
Translates to: RSPVTEVSGSGVISK*SNSAPRKALMSSNS
Trigger: TGAATTTGAAGACATAAGAGCCTTCCTTGGAGCACTATTAGATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR TCA 90 bp ATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTCAAATAAATaGACAAGATATATCTTAATACCAATGAATGCAGGGGGTCAAGTC +
Preference number: 1 (lower is better)
Translates to: ISVVECWNCQEWSNK*TRYILIPMNAGGQV
Trigger: GACTTGACCCCCTGCATTCATTGGTATTAAGATATATCTTGTTCATTTATTTGACCACTCCTGACAATTCCAGCACTCTACGACTGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR TCA 90 bp TTGGGTGTACTTAAAAATACATTGTCCAGAGTCCACTGTAAGGCATaGCCAATAAAAGCATCTCCATTTAGTTGTTTAACTGACTCGTGC +
Preference number: 1 (lower is better)
Translates to: LGVLKNTLSRVHCKA*PIKASPFSCLTDSC
Trigger: GCACGAGTCAGTTAAACAACTAAATGGAGATGCTTTTATTGGTCATGCCTTACAGTGGACTCTGGACAATGTATTTTTAAGTACACCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTGCTGTCTTTCTTCTaGAGCCTGGTGTCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLLLSFF*SLVSRG
Trigger: CCCCCGGGACACCAGGCTCCAGAAGAAAGACAGCAG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR GCA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTACGGCCTTGATTCCCTaGCTCTCCTCCGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: ESFLSLCSLASDTTITWTTALIP*LSSGSW
Trigger: CCAGGACCCGGAGGAGAGGCAGGGAATCAAGGCCGT...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTCCAGGAGCTCCCTTaGAATCGAGACTCCCTATCA +
Preference number: 2 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLQELP*NRDSLS
Trigger: TGATAGGGAGTCTCGATTTCAAGGGAGCTCCTGGAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTCTTCCCAAACGGCCTTaGTTCCCTGCCTCTCCTCCG +
Preference number: 2 (lower is better)
Translates to: ESFLSLCSLASDTTITWTLPKRP*FPASPP
Trigger: CGGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAG...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATCTCTCCTCCGGGTCCTaGAGGCCCCTGGGGACCTTT +
Preference number: 2 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNLSSGS*RPLGTF
Trigger: AAAGGTCCCCAGGGGCCTCCAGGACCCGGAGGAGAG...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGGCACATGCCTCTTCATaGGGCGCTTACTTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLAHASS*GAYFCR
Trigger: CCTACAGAAGTAAGCGCCTCATGAAGAGGCATGTGC...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR GCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTCTTAATACCAATGAATaGAGGGGGTCAAGTCACCTG +
Preference number: 2 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSLNTNE*RGSSHL
Trigger: CAGGTGACTTGACCCCCTGCATTCATTGGTATTAAG...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR GCA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCTACCATAACCTGGACTaGCATCATTGCCCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVIYHNLD*HHCPAS
Trigger: GCTTGCAGGGCAATGATGGCAGTCCAGGTTATGGTA...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCCTCACATGTAGAAAATaGAGCCAAGCCTTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVILTCRK*SQAFGS
Trigger: GGAGCCAAAGGCTTGGCTTCATTTTCTACATGTGAG...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCGGAACCACTATTACTTaGAATGTGCCAGTGTCGTCA +
Preference number: 2 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVGTTIT*NVPVSS
Trigger: TGACGACACTGGCACATTTCAAGTAATAGTGGTTCC...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATACTGTGGTCAGGTTTATaGATTCGGCCAAGCTGGACC +
Preference number: 2 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSILWSGL*IRPSWT
Trigger: GGTCCAGCTTGGCCGAATTCATAAACCTGACCACAG...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCCACGGTTGAATTCATaGATGTGGAACACCCACAGA +
Preference number: 2 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLPRLNS*MWNTHR
Trigger: TCTGTGGGTGTTCCACATCCATGAATTCAACCGTGG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
3UTR-3UTR CCA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCATGAAGCCAAGCCTTTaGCTCCTTTCACACCCTTAC +
Preference number: 2 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVIMKPSL*LLSHPY
Trigger: GTAAGGGTGTGAAAGGAGCCAAAGGCTTGGCTTCAT...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATGGGGGTGGTCTGGCTTaGTCACAAGAAGCATCTGGC +
Preference number: 2 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNGGGLA*SQEASG
Trigger: GCCAGATGCTTCTTGTGACCAAGCCAGACCACCCCC...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGAACTTCTTGCTCCTCTaGAGACATGAGGTGCTATCA +
Preference number: 2 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLNFLLL*RHEVLS
Trigger: TGATAGCACCTCATGTCTTCAGAGGAGCAAGAAGTT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR TCA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATACTAACTGGACTCTTCTaGGTGTTGGGTAGGAAGTCG +
Preference number: 2 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSILTGLF*VLGRKS
Trigger: CGACTTCCTACCCAACACTCAGAAGAGTCCAGTTAG...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR GCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTTAATACCAATGAATaGAGGGGGTCAAGTCACCTG +
Preference number: 2 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLLNTNE*RGSSHL
Trigger: CAGGTGACTTGACCCCCTGCATTCATTGGTATTAAG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR GCA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTCTGTGGGTCCTTCTATaGTACTGTCAACTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: ESFLSLCSLASDTTITWTLWVLL*YCQLQE
Trigger: CTCCTGGAGTTGACAGTAGCATAGAAGGACCCACAG...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp CGGCCCCGGAGGGAACCACTATTACTTGAAATGTGCCAGTGTCGTCAATCATGCTCAGTCGTAGAGTGCTaGAATTGTCAGGAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: RPRREPLLLEMCQCRQSCSVVEC*NCQEWS
Trigger: TGACCACTCCTGACAATTCCAGCACTCTACGACTGA...GCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp TCTGTAGGTGGTAAGATTGAACTCAGCTCTAACTGGACTCTTCTGAGTGTTGGGGCCTGCTGTTCCCTGTaGGCCTGTATGTCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: SVGGKIELSSNWTLLSVGACCSL*ACMSPS
Trigger: AGAAGGGGACATACAGGCCCACAGGGAACAGCAGGC...CCCAACACTCAGAAGAGTCCAGTTAGAGCTGAGTTCAATCTTACCACCTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAAGGTCCTGGAGGCCCCTaGGGACCTTTACTTCCCACA +
Preference number: 2 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQGPGGP*GPLLPT
Trigger: TGTGGGAAGTAAAGGTCCCCAGGGGCCTCCAGGACC...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATACCCCATCTAAGTGGCTaGTTTCCCCAGCAGATATCA +
Preference number: 2 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSIPHLSG*FPQQIS
Trigger: TGATATCTGCTGGGGAAACCAGCCACTTAGATGGGG...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR GCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATGTCCCTTTGCTCCCTTaGGTCCGACACTACCATAAC +
Preference number: 2 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNVPLLP*VRHYHN
Trigger: GTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTGGGTGTTTCGTTGTTaGAAATATCAGCCCTATCAT +
Preference number: 2 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLWVFRC*KYQPYH
Trigger: ATGATAGGGCTGATATTTTCAACAACGAAACACCCA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR GCA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAACTGGCCAGCCTCTTCTaGCTTGTCTTCCACGTTCTC +
Preference number: 2 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQLASLF*LVFHVL
Trigger: GAGAACGTGGAAGACAAGGCAGAAGAGGCTGGCCAG...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCTACAAACTGTTGCTTaGGTTCTGGCAGCAGATTTA +
Preference number: 2 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLLQTVA*VLAADL
Trigger: TAAATCTGCTGCCAGAACTCAAGCAACAGTTTGTAG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR GCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTCCAGAGTCTTACCATaGTTCCTAAGGCTAAGTTGT +
Preference number: 2 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLSRVLP*FLRLSC
Trigger: ACAACTTAGCCTTAGGAAGCATGGTAAGACTCTGGA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR GCA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATATCCAGAGTCTTACCATaGTTCCTAAGGCTAAGTTGT +
Preference number: 2 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSISRVLP*FLRLSC
Trigger: ACAACTTAGCCTTAGGAAGCATGGTAAGACTCTGGA...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR GCA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAAAAGAGGGGGACAGTCTaGCTAACAGGGCCATTGCTA +
Preference number: 2 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQKRGTV*LTGPLL
Trigger: TAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTT...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTGCACAGGGGGTGGTCTaGCTTGGTCACAAGAAGCAT +
Preference number: 2 (lower is better)
Translates to: KITLFSSVQANNSHSGVFAQGVV*LGHKKH
Trigger: ATGCTTCTTGTGACCAAGCCAGACCACCCCCTGTGC...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTGGGTGTTTCGTTGTTaGAAATATCAGCCCTATCAT +
Preference number: 2 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLWVFRC*KYQPYH
Trigger: ATGATAGGGCTGATATTTTCAACAACGAAACACCCA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR GCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCTACTCTGATCTCTTTTaGATCTCTGCAACTGCATAT +
Preference number: 2 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATYSDLF*ISATAY
Trigger: ATATGCAGTTGCAGAGATGCAAAAGAGATCAGAGTA...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCAGTGGTGTGTTTAAGTaGAATAGAAGGTCACGTTTT +
Preference number: 2 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATSGVFK*NRRSRF
Trigger: AAAACGTGACCTTCTATTCCACTTAAACACACCACT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CCA 90 bp CGGCCCCGGAGGGAACCACTATTACTTGAAATGTGCCAGTGTCGTCAATCATGCAGTGGTGTGTTTAAGTaGAATAGAAGGTCACGTTTT +
Preference number: 2 (lower is better)
Translates to: RPRREPLLLEMCQCRQSCSGVFK*NRRSRF
Trigger: AAAACGTGACCTTCTATTCCACTTAAACACACCACT...GCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp TCTGTAGGTGGTAAGATTGAACTCAGCTCTAACTGGACTCTTCTGAGTGTTGGGCTCCTTTCAAGCCTGTaGGTCCTTCTATGCTACTGT +
Preference number: 2 (lower is better)
Translates to: SVGGKIELSSNWTLLSVGLLSSL*VLLCYC
Trigger: ACAGTAGCATAGAAGGACCCACAGGCTTGAAAGGAG...CCCAACACTCAGAAGAGTCCAGTTAGAGCTGAGTTCAATCTTACCACCTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAAGACACTACCATAACCTaGACTGCCATCATTGCCCTG +
Preference number: 2 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQDTTIT*TAIIAL
Trigger: CAGGGCAATGATGGCAGTCCAGGTTATGGTAGTGTC...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTATCCATCTGCTCCATaGATCCAGGCAGGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: KITLFSSVQANNSHSGVFYPSAP*IQAGLL
Trigger: AAGAAGCCCTGCCTGGATGCATGGAGCAGATGGATA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR GCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATAAGAAGCATCTGGCTTaGACACATCATAGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNKKHLA*THHSRK
Trigger: CTTTCTGCTATGATGTGTGCAAGCCAGATGCTTCTT...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR GCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCATGCCTGCCAGGACTaGGGTCTCGCACATACTGAA +
Preference number: 2 (lower is better)
Translates to: ITKLGKEDGFAENELDRDHACQD*GLAHTE
Trigger: TTCAGTATGTGCGAGACCGCAGTCCTGGCAGGCATG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTCAGTCGTAGAGTGCTaGAATTGTCAGGAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: KITLFSSVQANNSHSGVFSVVEC*NCQEWS
Trigger: TGACCACTCCTGACAATTCCAGCACTCTACGACTGA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR GCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGTGTCAGTATCCATCTaGTCCATGCATCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: ITKLGKEDGFAENELDRDVSVSI*SMHPGR
Trigger: CCTGCCTGGATGCATGGAGCAGATGGATACTGACAC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTAATGGTCGTGGGGGCTaGTTTGGATCTATAGAGTTA +
Preference number: 2 (lower is better)
Translates to: KITLFSSVQANNSHSGVFNGRGG*FGSIEL
Trigger: TAACTCTATAGATCCAAAGCAGCCCCCACGACCATT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTCTACAAACTGTTGCTTaGGTTCTGGCAGCAGATTTA +
Preference number: 2 (lower is better)
Translates to: KITLFSSVQANNSHSGVFLQTVA*VLAADL
Trigger: TAAATCTGCTGCCAGAACTCAAGCAACAGTTTGTAG...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR TCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGGGCTGACAGAGATATaGTCCTTTTCTCCCCTTATC +
Preference number: 2 (lower is better)
Translates to: KLQIWHCHVALALFPLMSGLTEI*SFSPLI
Trigger: GATAAGGGGAGAAAAGGATCATATCTCTGTCAGCCC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
3UTR-3UTR CCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTAAATCTGAATGTCCTTaGTGTCAGTATCCATCTGCT +
Preference number: 2 (lower is better)
Translates to: KITLFSSVQANNSHSGVFKSECP*CQYPSA
Trigger: AGCAGATGGATACTGACACCAAGGACATTCAGATTT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR GCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATATATCAGTCGTAGAGTaGTGGAATTGTCAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: ITKLGKEDGFAENELDRDISVVE*WNCQEW
Trigger: CCACTCCTGACAATTCCAGCACTCTACGACTGATAT...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTCTGCTAATCCTGTTTTaGTGCTGTTTATTATTGACT +
Preference number: 2 (lower is better)
Translates to: KITLFSSVQANNSHSGVFLLILF*CCLLLT
Trigger: AGTCAATAATAAACAGCACCAAAACAGGATTAGCAG...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTTTAATCATGTTGTTTaGGAGCACTTTCTATCATCC +
Preference number: 2 (lower is better)
Translates to: KITLFSSVQANNSHSGVFFNHVV*EHFLSS
Trigger: GGATGATAGAAAGTGCTCCCAAACAACATGATTAAA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATAAACAAAAATGCAGATaGGGACACAGCCATCAATAC +
Preference number: 2 (lower is better)
Translates to: ITKLGKEDGFAENELDRDKQKCR*GHSHQY
Trigger: GTATTGATGGCTGTGTCCTCATCTGCATTTTTGTTT...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCTAAGTATTACAATCTaGTGCCGTGTTAAGTTGCAT +
Preference number: 2 (lower is better)
Translates to: ITKLGKEDGFAENELDRDLSITI*CRVKLH
Trigger: ATGCAACTTAACACGGCATCAGATTGTAATACTTAG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
3UTR-3UTR GCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTACTCTGATCTCTTTTaGATCTCTGCAACTGCATAT +
Preference number: 2 (lower is better)
Translates to: KLQIWHCHVALALFPLMSYSDLF*ISATAY
Trigger: ATATGCAGTTGCAGAGATGCAAAAGAGATCAGAGTA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
3UTR GCA 72 bp TTTATTTCCTTGGCTTCCCAAACGGCCTTGATTCCCTaGCTCTCCTCCGGGTCCTGGAGGCCCCTGGGGACC +
Preference number: 3 (lower is better)
Translates to: FISLASQTALIP*LSSGSWRPLGT
Trigger: GGTCCCCAGGGGCCTCCAGGACCCGGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGCCAAGGAAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR GCA 72 bp TTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTaGCATCATTGCCCTGCAAGCCACGAGGACCAGGAA +
Preference number: 3 (lower is better)
Translates to: LLPCVRHYHNLD*HHCPASHEDQE
Trigger: TTCCTGGTCCTCGTGGCTTGCAGGGCAATGATGGCAGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR GCA 72 bp AGTCGGCCCCGGAGGGAACCACTATTACTTGAAATGTaGCAGTGTCGTCAATCATGCCTGCCAGGACTGCGG +
Preference number: 3 (lower is better)
Translates to: SRPRREPLLLEM*QCRQSCLPGLR
Trigger: CCGCAGTCCTGGCAGGCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCAGGGGGTGGTCTGGCTaGGTCACAAGAAGCATCTGG +
Preference number: 3 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATRGWSG*VTRSIW
Trigger: CCAGATGCTTCTTGTGACCAAGCCAGACCACCCCCT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp GTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGCCATCATTGCCCAGCCTCTTCTGCCTaGTCTTCCACGTTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: VPLLPCVRHYHNLDCHHCPASSA*SSTFSF
Trigger: AAAGGAGAACGTGGAAGACAAGGCAGAAGAGGCTGG...GCAATGATGGCAGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCCAGCAGATATCATTTaGCCTCTAGCTCCCTTCAGC +
Preference number: 3 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVPADII*PLAPFS
Trigger: GCTGAAGGGAGCTAGAGGCAAAATGATATCTGCTGG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTCCTACAAACTGTTGCTaGAGTTCTGGCAGCAGATTT +
Preference number: 3 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSPTNCC*SSGSRF
Trigger: AAATCTGCTGCCAGAACTCAAGCAACAGTTTGTAGG...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATATCCAGGGAATCCTTCTaGTCCCTTTGCTCCCTTGCG +
Preference number: 3 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSISRESF*SLCSLA
Trigger: CGCAAGGGAGCAAAGGGACAAGAAGGATTCCCTGGA...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR CCA 72 bp AAGCAGCATCCATGTAAGACTGCACAGGGGGTGGTCTaGCTTGGTCACAAGAAGCATCTGGCTTGCACACAT +
Preference number: 3 (lower is better)
Translates to: KQHPCKTAQGVV*LGHKKHLACTH
Trigger: ATGTGTGCAAGCCAGATGCTTCTTGTGACCAAGCCAGACCACCCCCTGTGCAGTCTTACATGGATGCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR CCA 72 bp AAGGAAAGCAGCATCCATGTAAGACTGCACAGGGGGTaGTCTGGCTTGGTCACAAGAAGCATCTGGCTTGCA +
Preference number: 3 (lower is better)
Translates to: KESSIHVRLHRG*SGLVTRSIWLA
Trigger: TGCAAGCCAGATGCTTCTTGTGACCAAGCCAGACCACCCCCTGTGCAGTCTTACATGGATGCTGCTTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATAACTCCAGGAGCTCCCTaGAAATCGAGACTCCCTATC +
Preference number: 3 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSITPGAP*KSRLPI
Trigger: GATAGGGAGTCTCGATTTCAAGGGAGCTCCTGGAGT...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCGGGAACCACTATTACTaGAAATGTGCCAGTGTCGTC +
Preference number: 3 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVIGNHYY*KCASVV
Trigger: GACGACACTGGCACATTTCAAGTAATAGTGGTTCCC...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATATCCTTCTTGTCCCTTaGCTCCCTTGCGTCCGACAC +
Preference number: 3 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNILLVP*LPCVRH
Trigger: GTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGAT...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTGCTTCCCAAACGGCCTaGATTCCCTGCCTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: KITLFSSVQANNSHSGVFASQTA*IPCLSS
Trigger: GGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGC...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTTTCTCCTTTATTTCCTaGGCTTCCCAAACGGCCTTG +
Preference number: 3 (lower is better)
Translates to: ESFLSLCSLASDTTITWTFSFIS*ASQTAL
Trigger: CAAGGCCGTTTGGGAAGCCAAGGAAATAAAGGAGAA...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTAATGAAGCCAAGCCTTaGGCTCCTTTCACACCCTTA +
Preference number: 3 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLNEAKP*APFTPL
Trigger: TAAGGGTGTGAAAGGAGCCAAAGGCTTGGCTTCATT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR TCA 72 bp CAATCATGCCTGCCAGGACTGCGGTCTCGCACATACTaGATGAGCTCACATGTAGAAAATGAAGCCAAGCCT +
Preference number: 3 (lower is better)
Translates to: QSCLPGLRSRTY*MSSHVENEAKP
Trigger: AGGCTTGGCTTCATTTTCTACATGTGAGCTCATTCAGTATGTGCGAGACCGCAGTCCTGGCAGGCATGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR GCA 72 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATaGATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAG +
Preference number: 3 (lower is better)
Translates to: SECPWCQYPSAP*IQAGLLSIPKE
Trigger: CTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCCTACAAACTGTTGCTaGAGTTCTGGCAGCAGATTT +
Preference number: 3 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLPTNCC*SSGSRF
Trigger: AAATCTGCTGCCAGAACTCAAGCAACAGTTTGTAGG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTCTGCTAATCCTGTTTaGGTGCTGTTTATTATTGAC +
Preference number: 3 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVSANPV*VLFIID
Trigger: GTCAATAATAAACAGCACCAAAACAGGATTAGCAGA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTTGGGTGTTTCGTTGTaGAAAATATCAGCCCTATCA +
Preference number: 3 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLLGVSL*KISALS
Trigger: TGATAGGGCTGATATTTTCAACAACGAAACACCCAA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CAA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAATGCCTAACAGGGCCATaGCTACCAACTGTGGAGCCA +
Preference number: 3 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQCLTGP*LPTVEP
Trigger: TGGCTCCACAGTTGGTAGCAATGGCCCTGTTAGGCA...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR GCA 72 bp GGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTaGTTTGGATCTATAGAGTTAAGTCTGTTGCACTTT +
Preference number: 3 (lower is better)
Translates to: GPGTKLRNGRGG*FGSIELSLLHF
Trigger: AAAGTGCAACAGACTTAACTCTATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATAACATTGGGTGTTTCGTaGTTGAAAATATCAGCCCTA +
Preference number: 3 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSITLGVS*LKISAL
Trigger: TAGGGCTGATATTTTCAACAACGAAACACCCAATGT...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR TCA 72 bp GTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTaGTCTAATAGTGCTCCAAGGAAGGCTCTTATGTCT +
Preference number: 3 (lower is better)
Translates to: VTEVSGSGVISK*SNSAPRKALMS
Trigger: AGACATAAGAGCCTTCCTTGGAGCACTATTAGATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR CCA 72 bp TTTAAGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTaGGGGCTGCTTTGGATCTATAGAGTTAAGTCTGTT +
Preference number: 3 (lower is better)
Translates to: FKWSRNKASEWS*GLLWIYRVKSV
Trigger: AACAGACTTAACTCTATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGATAACCTACAAACTGTaGCTTGAGTTCTGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: MKQFFDISVVECWNCQEWITYKL*LEFWQQ
Trigger: CTGCTGCCAGAACTCAAGCAACAGTTTGTAGGTTAT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CAA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATTGCCTAACAGGGCCATaGCTACCAACTGTGGAGCCA +
Preference number: 3 (lower is better)
Translates to: ITKLGKEDGFAENELDRDCLTGP*LPTVEP
Trigger: TGGCTCCACAGTTGGTAGCAATGGCCCTGTTAGGCA...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR CCA 72 bp AGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTaGATCTATAGAGTTAAGTCTGTTGCACTTTATTTT +
Preference number: 3 (lower is better)
Translates to: RNKASEWSWGLL*IYRVKSVALYF
Trigger: AAAATAAAGTGCAACAGACTTAACTCTATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTACTGTAATGCTGAGATaGGACTTCAGCCTGGAGCCA +
Preference number: 3 (lower is better)
Translates to: KLQIWHCHVALALFPLMSTVMLR*DFSLEP
Trigger: TGGCTCCAGGCTGAAGTCCAATCTCAGCATTACAGT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
3UTR TCA 72 bp AATGTGACATTTAACTCCTTGAACTTCTTGCTCCTCTaGAGACATGAGGTGCTATCACTGGATTTCTCTAAG +
Preference number: 3 (lower is better)
Translates to: NVTFNSLNFLLL*RHEVLSLDFSK
Trigger: CTTAGAGAAATCCAGTGATAGCACCTCATGTCTTCAGAGGAGCAAGAAGTTCAAGGAGTTAAATGTCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR GCA 72 bp AGGCTGTTTTTAAGAGCTCTGCTAATCCTGTTTTGGTaGTGTTTATTATTGACTAAACAGCTACCTGATGGG +
Preference number: 3 (lower is better)
Translates to: RLFLRALLILFW*CLLLTKQLPDG
Trigger: CCCATCAGGTAGCTGTTTAGTCAATAATAAACAGCACCAAAACAGGATTAGCAGAGCTCTTAAAAACAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR-3UTR CAA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATACATTGGGTGTTTCGTaGTTGAAAATATCAGCCCTA +
Preference number: 3 (lower is better)
Translates to: ITKLGKEDGFAENELDRDTLGVS*LKISAL
Trigger: TAGGGCTGATATTTTCAACAACGAAACACCCAATGT...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR TCA 72 bp ACTGAGGTAAGGTCTGAACATTGGGTGTTTCGTTGTTaGAAATATCAGCCCTATCATAAAAACAAAAATGCA +
Preference number: 3 (lower is better)
Translates to: TEVRSEHWVFRC*KYQPYHKNKNA
Trigger: TGCATTTTTGTTTTTATGATAGGGCTGATATTTTCAACAACGAAACACCCAATGTTCAGACCTTACCTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR CCA 72 bp TTAAGGCTGTTTTTAAGAGCTCTGCTAATCCTGTTTTaGTGCTGTTTATTATTGACTAAACAGCTACCTGAT +
Preference number: 3 (lower is better)
Translates to: LRLFLRALLILF*CCLLLTKQLPD
Trigger: ATCAGGTAGCTGTTTAGTCAATAATAAACAGCACCAAAACAGGATTAGCAGAGCTCTTAAAAACAGCCTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TTTATTTCCTTGGCTTCCCAAACGGCCTTGATTCCCTGCCTCTCCTCCGGGTCCCTCTCCTCCGGGTCCTaGAGGCCCCTGGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: FISLASQTALIPCLSSGSLSSGS*RPLGTF
Trigger: AAAGGTCCCCAGGGGCCTCCAGGACCCGGAGGAGAG...GGACCCGGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGCCAAGGAAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTTCCCAAACGGCCTTaGTTCCCTGCCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLPKRP*FPASPP
Trigger: CGGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCCATGGCAGCCGTGGTaGTGGAGTGGGCATCCGCGG +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLPWQPW*WSGHPR
Trigger: CCGCGGATGCCCACTCCATCACCACGGCTGCCATGG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTGCTGTCTTTCTTCTaGAGCCTGGTGTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLLSFF*SLVSRG
Trigger: CCCCCGGGACACCAGGCTCCAGAAGAAAGACAGCAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCGCCCCAAACCGGACCTaGTTCTTGCCCACATCAGCT +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVAPNRT*FLPTSA
Trigger: AGCTGATGTGGGCAAGAATCAGGTCCGGTTTGGGGC...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCCCTCGCAGGCCCTTTaGTCCACGGTCACCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATPSQAL*STVTRS
Trigger: ACTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCACGGCCTTGATTCCCTaGCTCTCCTCCGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATTALIP*LSSGSW
Trigger: CCAGGACCCGGAGGAGAGGCAGGGAATCAAGGCCGT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGGTCGTCAATCGCAAATaGGCGCCTGACCGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLVVNRK*APDRGH
Trigger: GTGCCCTCGGTCAGGCGCGCATTTGCGATTGACGAC...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCCAACTGGGTGTCGCTaGCGCCCTCTATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLPTGCR*RPLCPG
Trigger: CCCTGGGCATAGAGGGCGCCAGCGACACCCAGTTGG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp GTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGCCATCATTGCCTGCTGTCTTTCTTCTaGAGCCTGGTGTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: VPLLPCVRHYHNLDCHHCLLSFF*SLVSRG
Trigger: CCCCCGGGACACCAGGCTCCAGAAGAAAGACAGCAG...GCAATGATGGCAGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGATCTGGGGCACCCCCTaGTTCTTCCGACTGCCATTC +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLIWGTP*FFRLPF
Trigger: GAATGGCAGTCGGAAGAATCAGGGGGTGCCCCAGAT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCAGTGAACATGTGGTCTaGGAAGCCCAGTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVSEHVV*EAQCLS
Trigger: GCTGAGGCACTGGGCTTCTCAGACCACATGTTCACT...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTCTTGAAAAGCCACACTaGCCTGAGTCTCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSLEKPH*PESLCP
Trigger: TGGGCACAGAGACTCAGGTCAGTGTGGCTTTTCAAG...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCCACCCGGTCTCCAGTaGCAGAAGTCTCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLPPGLQ*QKSPAL
Trigger: CAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTGG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCATCCCTTAGTACCTTaGTCTCCCACTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVHPLVP*SPTGPG
Trigger: CCCTGGACCAGTGGGAGAGCAAGGTACTAAGGGATG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTGGCCAGCCTCTTCTaGCTTGTCTTCCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLASLF*LVFHVL
Trigger: GAGAACGTGGAAGACAAGGCAGAAGAGGCTGGCCAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTTCCTTCTTGTCCCTTTaGTCCCTTGCGTCCGACACT +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSSFLSL*SLASDT
Trigger: AGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGA...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCACCTCGTCTTGGGACTaGCCATCTGTAAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVTSSWD*PSVRTS
Trigger: GCTGGTCCTTACAGATGGCCAGTCCCAAGACGAGGT...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTGGGCCACCTCGTCTTaGGACTGGCCATCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLWATSS*DWPSVR
Trigger: CCTTACAGATGGCCAGTCCCAAGACGAGGTGGCCCA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCGGTCCTGGAGGCCCCTaGGGACCTTTACTTCCCACA +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATGPGGP*GPLLPT
Trigger: TGTGGGAAGTAAAGGTCCCCAGGGGCCTCCAGGACC...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGGGGGGTGGTCTGGCTTaGTCACAAGAAGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLGGGLA*SQEASG
Trigger: GCCAGATGCTTCTTGTGACCAAGCCAGACCACCCCC...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCAGACTGCACAGGGGGTaGTCTGGCTTGGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVRLHRG*SGLVTR
Trigger: TCTTGTGACCAAGCCAGACCACCCCCTGTGCAGTCT...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTGCTTCGGAATGGTCGTaGGGGCTGCTTTGGATCTAT +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSASEWS*GLLWIY
Trigger: ATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGC...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCAAAGCCACACTGACCTaGGTCTCTGTGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVIKATLT*VSVPTS
Trigger: TGAGGTGGGCACAGAGACTCAGGTCAGTGTGGCTTT...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTTCCTTTCAGCAACATTaGCCAGCTGCTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSSFQQH*PAALTA
Trigger: GGCTGTCAAAGCAGCTGGTCAATGTTGCTGAAAGGA...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCGCACATGCCTCTTCATaGGGCGCTTACTTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVAHASS*GAYFCR
Trigger: CCTACAGAAGTAAGCGCCTCATGAAGAGGCATGTGC...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTGTGGTCAGGTTTATaGATTCGGCCAAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLWSGL*IRPSWT
Trigger: GGTCCAGCTTGGCCGAATTCATAAACCTGACCACAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCATCCCTTAGTACCTTaGTCTCCCACTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLHPLVP*SPTGPG
Trigger: CCCTGGACCAGTGGGAGAGCAAGGTACTAAGGGATG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCCATGCCTGCCAGGACTaGGGTCTCGCACATACTGAA +
Preference number: 4 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVIHACQD*GLAHTE
Trigger: TTCAGTATGTGCGAGACCGCAGTCCTGGCAGGCATG...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCATCCGCTCAAATTCCTaGTCAGTGACATCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVIRSNS*SVTSRE
Trigger: CTCCCGGGATGTCACTGAGCAGGAATTTGAGCGGAT...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTCTGCCAATCTCCCTaGTGGCAGAGGATCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLCQSP*WQRISH
Trigger: ATGAGAGATCCTCTGCCAGCAGGGAGATTGGCAGAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGAGGTCCCCTTTTCCCTaGTGGTCCAGGATCTCCCAT +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLRSPFP*WSRISH
Trigger: ATGGGAGATCCTGGACCACCAGGGAAAAGGGGACCT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGGTCCTGGAGGCCCCTaGGGACCTTTACTTCCCACA +
Preference number: 4 (lower is better)
Translates to: ESFLSLCSLASDTTITWTGPGGP*GPLLPT
Trigger: TGTGGGAAGTAAAGGTCCCCAGGGGCCTCCAGGACC...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTGACACTACCATAACCTaGACTGCCATCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSDTTIT*TAIIAL
Trigger: CAGGGCAATGATGGCAGTCCAGGTTATGGTAGTGTC...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTGGATCCCATCTCTCCTaGAAGCCCAGCAGATATCAT +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSGSHLS*KPSRYH
Trigger: ATGATATCTGCTGGGCTTCCAGGAGAGATGGGATCC...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp CGGCCCCGGAGGGAACCACTATTACTTGAAATGTGCCAGTGTCGTCAATCATGCGGGGGTGGTCTGGCTTaGTCACAAGAAGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: RPRREPLLLEMCQCRQSCGGGLA*SQEASG
Trigger: GCCAGATGCTTCTTGTGACCAAGCCAGACCACCCCC...GCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
3UTR CAA 72 bp TTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATaGCTACCAACTGTGGAGCCAGCTCTTAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: FPKRGTVCLTGP*LPTVEPALRLR
Trigger: CCTCAGTCTAAGAGCTGGCTCCACAGTTGGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCCACACAACCAGATTTaGGCGTTTCAGTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVPHNQI*AFQSSL
Trigger: CAGAGAGGACTGAAACGCTCAAATCTGGTTGTGTGG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCAATGTTCCACCTCCCTaGGTGCAGCACCGATGTGTG +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATNVPPP*VQHRCV
Trigger: CACACATCGGTGCTGCACTCAGGGAGGTGGAACATT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTAACTGGACTCTTCTaGGTGTTGGGTAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLTGLF*VLGRKS
Trigger: CGACTTCCTACCCAACACTCAGAAGAGTCCAGTTAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCAGTTTGGAGACATACTaGTCAGCAGGGTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVSLETY*SAGWDA
Trigger: AGCATCCCACCCTGCTGAGCAGTATGTCTCCAAACT...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCAGCCAGGACAAGAATaGCTTTGTCCCGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATQPGQE*LCPARP
Trigger: AGGCCTTGCGGGACAAAGGCATTCTTGTCCTGGCTG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCATCCACATCCCCAATaGCCACGGAGTAGATGTCGA +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLHPHPQ*PRSRCR
Trigger: TCGACATCTACTCCGTGGGCATTGGGGATGTGGATG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CGGCCCCGGAGGGAACCACTATTACTTGAAATGTGCCAGTGTCGTCAATCATGCCTGGCCAGCCTCTTCTaGCTTGTCTTCCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: RPRREPLLLEMCQCRQSCLASLF*LVFHVL
Trigger: GAGAACGTGGAAGACAAGGCAGAAGAGGCTGGCCAG...GCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGGTCCCTTTGCTCCCTTaGGTCCGACACTACCATAAC +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLVPLLP*VRHYHN
Trigger: GTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGACCAACTCGGTTGGGTaGACTGGGCATTCCGGTTTT +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLTNSVG*TGHSGF
Trigger: AAAACCGGAATGCCCAGTGCACCCAACCGAGTTGGT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCAAGAGGGGGACAGTCTaGCTAACAGGGCCATTGCTA +
Preference number: 4 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVIKRGTV*LTGPLL
Trigger: TAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTT...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCCTGCTGCCCATGTCTaGCCTGAAGTAATGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLPAAHV*PEVMFH
Trigger: GTGGAACATTACTTCAGGCCAGACATGGGCAGCAGG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGAGGGCTTCCGCGGCCTaGGCCACCTCGTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWRASAA*ATSSWD
Trigger: GTCCCAAGACGAGGTGGCCCAGGCCGCGGAAGCCCT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTCCCCTTTTCCCTGGTaGTCCAGGATCTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLSPFPW*SRISHC
Trigger: ACAATGGGAGATCCTGGACCACCAGGGAAAAGGGGA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATAACCTTGCTCTCCCACTaGTCCAGGGGCTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSITLLSH*SRGSSF
Trigger: GAAAGAGGAGCCCCTGGACCAGTGGGAGAGCAAGGT...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTATGAAGCCAAGCCTTTaGCTCCTTTCACACCCTTAC +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSMKPSL*LLSHPY
Trigger: GTAAGGGTGTGAAAGGAGCCAAAGGCTTGGCTTCAT...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCAATCTCCCTGCTaGCAGAGGATCTCTCATAAG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVCQSPC*QRISHK
Trigger: CTTATGAGAGATCCTCTGCCAGCAGGGAGATTGGCA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGAACAAAGCTTCGGAATaGTCGTGGGGGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLNKASE*SWGLLW
Trigger: CCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTCCCACCCATCTGCCTaGTATTCTCAATGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLSHPSA*YSQWPF
Trigger: GAAAGGCCATTGAGAATATCAGGCAGATGGGTGGGA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCGCAACAGACTCAGTGTaGAATTCAGTGCTGCGCCTG +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATATDSV*NSVLRL
Trigger: CAGGCGCAGCACTGAATTTCACACTGAGTCTGTTGC...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTTTCCCTGGGCTTCCCTaGGATCCCTCATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ESFLSLCSLASDTTITWTFPGLP*DPSSPF
Trigger: AAAGGGAGATGAGGGATCTCAGGGAAGCCCAGGGAA...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCAAATTCCTGCTCAGTaGCATCCCGGGAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLQIPAQ*HPGSGP
Trigger: TGGACCACTCCCGGGATGTCACTGAGCAGGAATTTG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCGGACTGACCGCTGCTaGAAAATGTGGCGATTTTTC +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLRTDRC*KMWRFF
Trigger: GAAAAATCGCCACATTTTTCAGCAGCGGTCAGTCCG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTAATAAGGCATATCCCTaGCATTTGGCTCGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSNKAYP*HLARKD
Trigger: ATCCTTGCGAGCCAAATGTCAGGGATATGCCTTATT...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp GTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGCCATCATTGCTACCATAACCTGGACTaGCATCATTGCCCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: VPLLPCVRHYHNLDCHHCYHNLD*HHCPAS
Trigger: GCTTGCAGGGCAATGATGGCAGTCCAGGTTATGGTA...GCAATGATGGCAGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CGGCCCCGGAGGGAACCACTATTACTTGAAATGTGCCAGTGTCGTCAATCATGCGTCCCTTTGCTCCCTTaGGTCCGACACTACCATAAC +
Preference number: 4 (lower is better)
Translates to: RPRREPLLLEMCQCRQSCVPLLP*VRHYHN
Trigger: GTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC...GCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTATCCATCTGCTCCATaGATCCAGGCAGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLYPSAP*IQAGLL
Trigger: AAGAAGCCCTGCCTGGATGCATGGAGCAGATGGATA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCGACAACAAGGTGGCATaGAACTTTGTTTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVDNKVA*NFVSSL
Trigger: CAGCGAGGAAACAAAGTTCCATGCCACCTTGTTGTC...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTACAGCTCCACGGGATTaGCACCATCAATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLTAPRD*HHQSPQ
Trigger: CTGTGGGGATTGATGGTGCCAATCCCGTGGAGCTGT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTGCTTTCACCCGCTGTaGTACAGATGTTGCGAACGA +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLCFHPL*YRCCER
Trigger: TCGTTCGCAACATCTGTACCACAGCGGGTGAAAGCA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTAGGTCCCCTTTTCCCTaGTGGTCCAGGATCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLRSPFP*WSRISH
Trigger: ATGGGAGATCCTGGACCACCAGGGAAAAGGGGACCT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTGCCTTCAAGTCCATCTaGTCCTGGGATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLAFKSI*SWDACC
Trigger: ACAGCAGGCATCCCAGGACCAGATGGACTTGAAGGC...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCTCTCCTCCGGGTCCTaGAGGCCCCTGGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWLSSGS*RPLGTF
Trigger: AAAGGTCCCCAGGGGCCTCCAGGACCCGGAGGAGAG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTGCACAGGGGGTGGTCTaGCTTGGTCACAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLAQGVV*LGHKKH
Trigger: ATGCTTCTTGTGACCAAGCCAGACCACCCCCTGTGC...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCCCCATCTAAGTGGCTaGTTTCCCCAGCAGATATCA +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLPHLSG*FPQQIS
Trigger: TGATATCTGCTGGGGAAACCAGCCACTTAGATGGGG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTTCGTGGGGGCTGCTTTaGATCTATAGAGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSSWGLL*IYRVKS
Trigger: AGACTTAACTCTATAGATCCAAAGCAGCCCCCACGA...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCGATCTGGTCCAATCTaGGACTTGCTCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATRSGPI*DLLTRF
Trigger: AAACCTGGTGAGCAAGTCTCAGATTGGACCAGATCG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTCCCACAGAATAGATaGTTACACCTTCTTGCCGAA +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLPQNR*LHLLAE
Trigger: TTCGGCAAGAAGGTGTAATCATCTATTCTGTGGGAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCCACCCGGTCTCCAGTaGCAGAAGTCTCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWPPGLQ*QKSPAL
Trigger: CAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTGG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCTGTGGTCAGGTTTATaGATTCGGCCAAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLLWSGL*IRPSWT
Trigger: GGTCCAGCTTGGCCGAATTCATAAACCTGACCACAG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGGCTCCTCTGAAGACATaGGGTGCTATCACTGGATTT +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLAPLKT*GAITGF
Trigger: AAATCCAGTGATAGCACCTCATGTCTTCAGAGGAGC...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp GTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGCCATCATTGCGCTCCTCTGAAGACATaGGGTGCTATCACTGGATTT +
Preference number: 4 (lower is better)
Translates to: VPLLPCVRHYHNLDCHHCAPLKT*GAITGF
Trigger: AAATCCAGTGATAGCACCTCATGTCTTCAGAGGAGC...GCAATGATGGCAGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTCGGAGGTTAACAGCTaGTTTTGTCACGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVSEVNS*FCHVVF
Trigger: GAAGACAACGTGACAAAAGCAGCTGTTAACCTCCGA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGTGAAATTCAGTGCTaGGCCTGTGTTTGTATTCCC +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVCEIQC*ACVCIP
Trigger: GGGAATACAAACACAGGCGCAGCACTGAATTTCACA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCAGCAGTATAAGTACTaGCACCCATGGCTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLQQYKY*HPWLGH
Trigger: ATGACCAAGCCATGGGTGGCAGTACTTATACTGCTG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTGCAACATTGACCAGCTaGTTTGACAGCCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLATLTS*FDSRLP
Trigger: TGGAAGCCGGCTGTCAAAGCAGCTGGTCAATGTTGC...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCTGTGGGTCCTTCTATaGTACTGTCAACTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATLWVLL*YCQLQE
Trigger: CTCCTGGAGTTGACAGTAGCATAGAAGGACCCACAG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp TCTGTAGGTGGTAAGATTGAACTCAGCTCTAACTGGACTCTTCTGAGTGTTGGGCCAGTTTGCAGCCCGTaGACTTACGGGATCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SVGGKIELSSNWTLLSVGPVCSP*TYGIPS
Trigger: CGAGGGGATCCCGTAAGTGCACGGGCTGCAAACTGG...CCCAACACTCAGAAGAGTCCAGTTAGAGCTGAGTTCAATCTTACCACCTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTCTTCTGAATCTCGGTaGGTCACCAGCACGGCAATC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLSSESR*VTSTAI
Trigger: GATTGCCGTGCTGGTGACCCACCGAGATTCAGAAGA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTATCACAATGAGGACTTaGGGGACCCCCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLITMRT*GTPLFR
Trigger: CCTGAACAAGGGGGTCCCCCAAGTCCTCATTGTGAT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp GTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGCCATCATTGCCTCCTTTCAAGCCTGTaGGTCCTTCTATGCTACTGT +
Preference number: 4 (lower is better)
Translates to: VPLLPCVRHYHNLDCHHCLLSSL*VLLCYC
Trigger: ACAGTAGCATAGAAGGACCCACAGGCTTGAAAGGAG...GCAATGATGGCAGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGATTTCCCCATCTAAGTaGCTGGTTTCCCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLISPSK*LVSPAD
Trigger: ATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAAT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TTTATTTCCTTGGCTTCCCAAACGGCCTTGATTCCCTGCCTCTCCTCCGGGTCCGAGGGTAGCTTTAAGTaGTCCAGGAACAAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: FISLASQTALIPCLSSGSEGSFK*SRNKAS
Trigger: CGAAGCTTTGTTCCTGGACCACTTAAAGCTACCCTC...GGACCCGGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGCCAAGGAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTTCACAATCTACTTTTaGAGAGTTGCAGACACTGGC +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVFTIYF*RVADTG
Trigger: GCCAGTGTCTGCAACTCTTCAAAAGTAGATTGTGAA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTATCAGCCAAGTCACTTaGATCAGCAGGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLISQVT*ISRSIQ
Trigger: CTGGATGGACCTGCTGATTCAAGTGACTTGGCTGAT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCGGTCTCGCACATACTaGATGAGCTCACATGTAGAA +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATRSRTY*MSSHVE
Trigger: TTCTACATGTGAGCTCATTCAGTATGTGCGAGACCG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGGGAACCACTATTACTTaGAATGTGCCAGTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLGTTIT*NVPVSS
Trigger: TGACGACACTGGCACATTTCAAGTAATAGTGGTTCC...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTCTAACTGGACTCTTCTaGGTGTTGGGTAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: ESFLSLCSLASDTTITWTLTGLF*VLGRKS
Trigger: CGACTTCCTACCCAACACTCAGAAGAGTCCAGTTAG...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCTGTGGGTCCTTCTATaGTACTGTCAACTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLLWVLL*YCQLQE
Trigger: CTCCTGGAGTTGACAGTAGCATAGAAGGACCCACAG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCGGAAATAAACCGCATTaGTCTGCCAATCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATGNKPH*SANLPA
Trigger: AGCAGGGAGATTGGCAGAGCAATGCGGTTTATTTCC...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp GTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGCCATCATTGCCTTAATACCAATGAATaGAGGGGGTCAAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: VPLLPCVRHYHNLDCHHCLNTNE*RGSSHL
Trigger: CAGGTGACTTGACCCCCTGCATTCATTGGTATTAAG...GCAATGATGGCAGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCTCTCCCCTTATCTCCTaGTACCACCCATTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATSPLIS*YHPFFS
Trigger: AGAGAAGAATGGGTGGTAGCAGGAGATAAGGGGAGA...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTAGTTTATCACTGTACTaGGCCAGGGCCACACGGTAT +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLSLSLY*ARATRY
Trigger: ATACCGTGTGGCCCTGGCCCAGTACAGTGATAAACT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCGCCATAGAAGGGCCTTaGCAAGCTTCTACAAAGATG +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATAIEGP*QASTKM
Trigger: CATCTTTGTAGAAGCTTGCCAAGGCCCTTCTATGGC...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCCAACCCGCACCTTATaGGGAGCAATGTTGAACATC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLPTRTL*GAMLNI
Trigger: GATGTTCAACATTGCTCCCCATAAGGTGCGGGTTGG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCCGAAGCACTACTGCTaGTTCCTTTACTATGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATPKHYC*FLYYVL
Trigger: CAGGACATAGTAAAGGAACCAGCAGTAGTGCTTCGG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCTGATCTCCTCAAGCTaGGTGACATTGGAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLLISSS*VTLEPN
Trigger: GTTTGGCTCCAATGTCACCCAGCTTGAGGAGATCAG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTATTTTTCCATGGCATTaGTCACTTGAAAAGCCACAC +
Preference number: 4 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSIFPWH*SLEKPH
Trigger: GTGTGGCTTTTCAAGTGACCAATGCCATGGAAAAAT...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCAGAAAGTGCACCGCTaGAGTCTCTCTAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLQKVHR*SLSNAG
Trigger: ACCAGCATTAGAGAGACTCCAGCGGTGCACTTTCTG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCTCAGTCGTAGAGTGCTaGAATTGTCAGGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATSVVEC*NCQEWS
Trigger: TGACCACTCCTGACAATTCCAGCACTCTACGACTGA...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGGGCCTGGGTGCTCCCTaGGCCATCGATAAGCAGATA +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWGLGAP*AIDKQI
Trigger: TATCTGCTTATCGATGGCTCAGGGAGCACCCAGGCC...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCACTGGCTGTCACATCTaGAAATATTCCCTTCAGACC +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATTGCHI*KYSLQT
Trigger: GGTCTGAAGGGAATATTTTCAGATGTGACAGCCAGT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGGCAGTCCCGGTGATCTaGATGAGCTGCTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWAVPVI*MSCWSS
Trigger: GGATGACCAGCAGCTCATTCAGATCACCGGGACTGC...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCGAACGATCCTTTTATTaGCCTTCTTCAGTTCATCGA +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVERSFY*PSSVHR
Trigger: TCGATGAACTGAAGAAGGTCAATAAAAGGATCGTTC...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTTTCCTCGAGCAGCTaGTTTATTCTGAAATGTATC +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLSSSS*FILKCI
Trigger: GATACATTTCAGAATAAATCAGCTGCTCGAGGAAAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATATTGACCAGCTGCTTTaGCAGCCGGCTTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNIDQLL*QPASKF
Trigger: GAACTTGGAAGCCGGCTGTCAAAGCAGCTGGTCAAT...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCTCACATGTAGAAAATaGAGCCAAGCCTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLLTCRK*SQAFGS
Trigger: GGAGCCAAAGGCTTGGCTTCATTTTCTACATGTGAG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATACTCACATGTAGAAAATaGAGCCAAGCCTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSILTCRK*SQAFGS
Trigger: GGAGCCAAAGGCTTGGCTTCATTTTCTACATGTGAG...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATGCACATGCCTCTTCATaGGGCGCTTACTTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNAHASS*GAYFCR
Trigger: CCTACAGAAGTAAGCGCCTCATGAAGAGGCATGTGC...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACAAACTGTTGCTTaGGTTCTGGCAGCAGATTTA +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLLQTVA*VLAADL
Trigger: TAAATCTGCTGCCAGAACTCAAGCAACAGTTTGTAG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp TTTATTTCCTTGGCTTCCCAAACGGCCTTGATTCCCTGCCTCTCCTCCGGGTCCTCCAGAGTCTTACCATaGTTCCTAAGGCTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: FISLASQTALIPCLSSGSSRVLP*FLRLSC
Trigger: ACAACTTAGCCTTAGGAAGCATGGTAAGACTCTGGA...GGACCCGGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGCCAAGGAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CGGCCCCGGAGGGAACCACTATTACTTGAAATGTGCCAGTGTCGTCAATCATGCATATCAGTCGTAGAGTaGTGGAATTGTCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RPRREPLLLEMCQCRQSCISVVE*WNCQEW
Trigger: CCACTCCTGACAATTCCAGCACTCTACGACTGATAT...GCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATGTGTCAGTATCCATCTaGTCCATGCATCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNVSVSI*SMHPGR
Trigger: CCTGCCTGGATGCATGGAGCAGATGGATACTGACAC...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTATTACTTGAAATGTaGCAGTGTCGTCAATCATGC +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLLLEM*QCRQSC
Trigger: GCATGATTGACGACACTGGCACATTTCAAGTAATAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTGGAAATCTGTGGCCTaGGTGCTCCCTGAGCCATCG +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWWKSVA*VLPEPS
Trigger: CGATGGCTCAGGGAGCACCCAGGCCACAGATTTCCA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCAACGTCTTCATTTCATaGAAATCTGTGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATNVFIS*KSVAWV
Trigger: CACCCAGGCCACAGATTTCCATGAAATGAAGACGTT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCTATGAAAGTTCCCAGTaGAAACTCCGGGTGATAGGT +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATYESSQ*KLRVIG
Trigger: ACCTATCACCCGGAGTTTCCACTGGGAACTTTCATA...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATTCCCCTTTTCCCTGGTaGTCCAGGATCTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNSPFPW*SRISHC
Trigger: ACAATGGGAGATCCTGGACCACCAGGGAAAAGGGGA...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCTCCTTTCAAGCCTGTaGGTCCTTCTATGCTACTGT +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLLLSSL*VLLCYC
Trigger: ACAGTAGCATAGAAGGACCCACAGGCTTGAAAGGAG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTAGAAGTCTCCGGCTCTaGGGTGATTTCAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLRSLRL*GDFKVI
Trigger: GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTGAGGGTAGCTTTAAGTaGTCCAGGAACAAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLEGSFK*SRNKAS
Trigger: CGAAGCTTTGTTCCTGGACCACTTAAAGCTACCCTC...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCGTCATTCTGGAGCACTaGAATTACCTCCAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATVILEH*NYLQFC
Trigger: ACAAAACTGGAGGTAATTTCAGTGCTCCAGAATGAC...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCTTGAAGTCATTTGGCTaGATGCTAGTTGAACCATCC +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATLKSFG*MLVEPS
Trigger: GGATGGTTCAACTAGCATTCAGCCAAATGACTTCAA...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGAAAGCCACACTGACCTaGGTCTCTGTGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWKATLT*VSVPTS
Trigger: TGAGGTGGGCACAGAGACTCAGGTCAGTGTGGCTTT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATCCAGAGCAACAGTTATaGGGGCATTCAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNPEQQL*GHSGLL
Trigger: AAGAAGGCCTGAATGCCCTCATAACTGTTGCTCTGG...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTGGGGTGATTTCAAAGTaGTCTAATAGTGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLGVISK*SNSAPR
Trigger: CCTTGGAGCACTATTAGATCACTTTGAAATCACCCC...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTCTCCGGCTCTGGGGTaGTTTCAAAGTGATCTAATA +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLSPALG*FQSDLI
Trigger: TATTAGATCACTTTGAAATCACCCCAGAGCCGGAGA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTGTCCACTGTAAGGCATaGCCAATAAAAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLVHCKA*PIKASP
Trigger: TGGAGATGCTTTTATTGGTCATGCCTTACAGTGGAC...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp TTTATTTCCTTGGCTTCCCAAACGGCCTTGATTCCCTGCCTCTCCTCCGGGTCCAAACAAAAATGCAGATaGGGACACAGCCATCAATAC +
Preference number: 4 (lower is better)
Translates to: FISLASQTALIPCLSSGSKQKCR*GHSHQY
Trigger: GTATTGATGGCTGTGTCCTCATCTGCATTTTTGTTT...GGACCCGGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGCCAAGGAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTAACTTCTTGCTCCTCTaGAGACATGAGGTGCTATCA +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLNFLLL*RHEVLS
Trigger: TGATAGCACCTCATGTCTTCAGAGGAGCAAGAAGTT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCTAAGTATTACAATCTaGTGCCGTGTTAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVLSITI*CRVKLH
Trigger: ATGCAACTTAACACGGCATCAGATTGTAATACTTAG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTTCTCTCAGTCTGTTTaGAGGCTCCAAGATGCTATC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLFSQSV*RLQDAI
Trigger: GATAGCATCTTGGAGCCTGCAAACAGACTGAGAGAA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCAGAATCCAAGAGGTTTaGATTGAGAAGAGATGGTCC +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATRIQEV*IEKRWS
Trigger: GGACCATCTCTTCTCAATGCAAACCTCTTGGATTCT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGAGAGGATGGCGATGTaGGCTCCCACGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSERMAM*APTGQL
Trigger: CAGCTGCCCCGTGGGAGCGCACATCGCCATCCTCTC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGGATTTTTCTCGTGTGTaGCCCCGGAAGCGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWDFSRV*PRKRPL
Trigger: AAGCGGACGCTTCCGGGGGCACACACGAGAAAAATC...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTACTCTGATCTCTTTTaGATCTCTGCAACTGCATAT +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVYSDLF*ISATAY
Trigger: ATATGCAGTTGCAGAGATGCAAAAGAGATCAGAGTA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATTATCCATCTGCTCCATaGATCCAGGCAGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNYPSAP*IQAGLL
Trigger: AAGAAGCCCTGCCTGGATGCATGGAGCAGATGGATA...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGGTTCACAGAAATATaGGAACAAATTATCACGAGG +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVWFTEI*EQIITR
Trigger: CCTCGTGATAATTTGTTCCCATATTTCTGTGAACCA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCAGGTTCTGTATATGCTaGAGAACCTCTGACTTATTT +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVRFCIC*RTSDLF
Trigger: AAATAAGTCAGAGGTTCTCCAGCATATACAGAACCT...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCGCTTGATCCTGCCATaGCTAACAGCTCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWRLILP*LTAPRD
Trigger: ATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGAAGAGTTGCAGACACTaGCTGTCACATCTGAAAATA +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLKSCRH*LSHLKI
Trigger: TATTTTCAGATGTGACAGCCAGTGTCTGCAACTCTT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGAGCGCACAAGGTGCCTaGCGTGGGAGTTATAGGAGA +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWSAQGA*RGSYRR
Trigger: TCTCCTATAACTCCCACGCCAGGCACCTTGTGCGCT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAAAGACTGCACAGGGGGTaGTCTGGCTTGGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQRLHRG*SGLVTR
Trigger: TCTTGTGACCAAGCCAGACCACCCCCTGTGCAGTCT...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTGGGGCTCCTGCCTTTaGAGGTGCTCAGGTGGAATT +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFWGSCL*RCSGGI
Trigger: AATTCCACCTGAGCACCTTCAAAGGCAGGAGCCCCA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTGTCACGTTGTCTTCTaGATCTCGGTGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWCHVVF*ISVGHQ
Trigger: CTGGTGACCCACCGAGATTCAGAAGACAACGTGACA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCAGCTGTCAGCATACTaGACGGCCCCAACCCGCACC +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDQLSAY*TAPTRT
Trigger: GGTGCGGGTTGGGGCCGTTCAGTATGCTGACAGCTG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTCTCCTCAAGCTGGGTaGCATTGGAGCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWSPQAG*HWSQTL
Trigger: GAGTGTTTGGCTCCAATGTCACCCAGCTTGAGGAGA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTGGCTGAATGCTAGTTaGACCATCCATAAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLWLNAS*TIHKEN
Trigger: GTTTTCCTTATGGATGGTTCAACTAGCATTCAGCCA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCTGACATCAAAGTCTTaGACAACAGATGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATLTSKS*TTDARN
Trigger: ATTTCTGGCATCTGTTGTTCAAGACTTTGATGTCAG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGGCAGCTGATTTATTCTaGAATGTATCCCATAGAGAA +
Preference number: 4 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLAADLF*NVSHRE
Trigger: TTCTCTATGGGATACATTTCAGAATAAATCAGCTGC...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGATTGACCAGCTGCTTTaGCAGCCGGCTTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWIDQLL*QPASKF
Trigger: GAACTTGGAAGCCGGCTGTCAAAGCAGCTGGTCAAT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGATTGCACGCCTGATTaGGTTTATAAAGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: ESFLSLCSLASDTTITWTDCTPD*VYKGLH
Trigger: GTGAAGTCCTTTATAAACTCAATCAGGCGTGCAATC...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCTGGGTGTTTCGTTGTTaGAAATATCAGCCCTATCAT +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATWVFRC*KYQPYH
Trigger: ATGATAGGGCTGATATTTTCAACAACGAAACACCCA...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp CGGCCCCGGAGGGAACCACTATTACTTGAAATGTGCCAGTGTCGTCAATCATGCTGGGTGTTTCGTTGTTaGAAATATCAGCCCTATCAT +
Preference number: 4 (lower is better)
Translates to: RPRREPLLLEMCQCRQSCWVFRC*KYQPYH
Trigger: ATGATAGGGCTGATATTTTCAACAACGAAACACCCA...GCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAACTCCAGGAGCTCCCTTaGAATCGAGACTCCCTATCA +
Preference number: 4 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQLQELP*NRDSLS
Trigger: TGATAGGGAGTCTCGATTTCAAGGGAGCTCCTGGAG...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCGTCTTGAACAACAGATaGCAGAAATTCCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVVLNNR*QKFLHF
Trigger: AAAATGAAGGAATTTCTGGCATCTGTTGTTCAAGAC...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTAGAATCCAAGAGGTTTaGATTGAGAAGAGATGGTCC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLRIQEV*IEKRWS
Trigger: GGACCATCTCTTCTCAATGCAAACCTCTTGGATTCT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCCCTCGCAGGCCCTTTaGTCCACGGTCACCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSPSQAL*STVTRS
Trigger: ACTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATACGGCCTTGATTCCCTaGCTCTCCTCCGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDTALIP*LSSGSW
Trigger: CCAGGACCCGGAGGAGAGGCAGGGAATCAAGGCCGT...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTCATGCCTGCCAGGACTaGGGTCTCGCACATACTGAA +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFHACQD*GLAHTE
Trigger: TTCAGTATGTGCGAGACCGCAGTCCTGGCAGGCATG...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CGGCCCCGGAGGGAACCACTATTACTTGAAATGTGCCAGTGTCGTCAATCATGCTCTGAAGACATGAGGTaGTATCACTGGATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: RPRREPLLLEMCQCRQSCSEDMR*YHWISL
Trigger: TAGAGAAATCCAGTGATAGCACCTCATGTCTTCAGA...GCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTTTCATGGAAATCTGTaGCCTGGGTGCTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWFHGNL*PGCSLS
Trigger: GCTCAGGGAGCACCCAGGCCACAGATTTCCATGAAA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTCTCTCAGCTGTGTTTaGTTGGCCTCCTTGATCCCG +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWSLSCV*LASLIP
Trigger: CGGGATCAAGGAGGCCAACCAAACACAGCTGAGAGA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCATTTTTCCATGGCATTaGTCACTTGAAAAGCCACAC +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATIFPWH*SLEKPH
Trigger: GTGTGGCTTTTCAAGTGACCAATGCCATGGAAAAAT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATAGAAGTCTCCGGCTCTaGGGTGATTTCAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNRSLRL*GDFKVI
Trigger: GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCT...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCGCCCTTGGTGGGGCTaGAGTACTGAGACACAAAGC +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLRPWWG*STETQS
Trigger: GCTTTGTGTCTCAGTACTTCAGCCCCACCAAGGGCG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGGTTTCCATCCAAGGCTaGCCTTCAAGCAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWVSIQG*PSSKVC
Trigger: GCAGACTTTGCTTGAAGGTCAGCCTTGGATGGAAAC...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTCTTGAAAAGCCACACTaGCCTGAGTCTCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFLEKPH*PESLCP
Trigger: TGGGCACAGAGACTCAGGTCAGTGTGGCTTTTCAAG...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCTTCCCAAACGGCCTTaGTTCCCTGCCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDLPKRP*FPASPP
Trigger: CGGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATAACTTCTTGCTCCTCTaGAGACATGAGGTGCTATCA +
Preference number: 4 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNNFLLL*RHEVLS
Trigger: TGATAGCACCTCATGTCTTCAGAGGAGCAAGAAGTT...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCCTCTGACTTATTTATaGCCATGCTCAGTGAATTTA +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATPLTYL*PCSVNL
Trigger: TAAATTCACTGAGCATGGGCATAAATAAGTCAGAGG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTGTCCCGCAAGGCCTTTaGCGTGGCATTGAGTTTATC +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFVPQGL*RGIEFI
Trigger: GATAAACTCAATGCCACGGCAAAGGCCTTGCGGGAC...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTTCCACCTCCCTGAGTaGAGCACCGATGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFFHLPE*STDVCV
Trigger: AACACACACATCGGTGCTGCACTCAGGGAGGTGGAA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCAGGATCTCCCATTGTaGCATCTCCTCCAATGCACT +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWQDLPL*HLLQCT
Trigger: AGTGCATTGGAGGAGATGGCACAATGGGAGATCCTG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGACTGACTCGTGCACATaGCTCTTCATGAGGCGCTTA +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWTDSCT*LFMRRL
Trigger: TAAGCGCCTCATGAAGAGGCATGTGCACGAGTCAGT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp GCGAGATCCTCCAGTTCCTTGTCATCCCAAATAGGGCCAAGGGAAAACACAAATTGTTTAACTGACTCGTaGACATGCCTCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: ARSSSSLSSQIGPRENTNCLTDS*TCLFMR
Trigger: CCTCATGAAGAGGCATGTGCACGAGTCAGTTAAACA...ATTTGTGTTTTCCCTTGGCCCTATTTGGGATGACAAGGAACTGGAGGATCTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTCTTCTATTTGCAGCATaGTTTAGAGCTCTCACCTAT +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLLLFAA*FRALTY
Trigger: ATAGGTGAGAGCTCTAAAGCATGCTGCAAATAGAAG...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTGTGACATCCCGGGAGTaGTCCAGGGCAAACACCAAC +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLVTSRE*SRANTN
Trigger: GTTGGTGTTTGCCCTGGACCACTCCCGGGATGTCAC...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCAGAAAGTGCACCGCTaGAGTCTCTCTAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWQKVHR*SLSNAG
Trigger: ACCAGCATTAGAGAGACTCCAGCGGTGCACTTTCTG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp GTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGCCATCATTGCCTGCTAATCCTGTTTTaGTGCTGTTTATTATTGACT +
Preference number: 4 (lower is better)
Translates to: VPLLPCVRHYHNLDCHHCLLILF*CCLLLT
Trigger: AGTCAATAATAAACAGCACCAAAACAGGATTAGCAG...GCAATGATGGCAGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTGTTGGAGTATTTATTaGTCTCAAATTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLCWSIY*SQIPSP
Trigger: GGGACTTGGAATTTGAGATCAATAAATACTCCAACA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATTGCCCCGGGCTTCAGTaGACATGTGGTCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDCPGLQ*TCGLRS
Trigger: GCTTCTCAGACCACATGTTCACTGAAGCCCGGGGCA...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTCCTTTCAGCAACATTaGCCAGCTGCTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFSFQQH*PAALTA
Trigger: GGCTGTCAAAGCAGCTGGTCAATGTTGCTGAAAGGA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATTGGGCATCCGCGGACTaGCCGCTGCTGAAAAATGTG +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDWASAD*PLLKNV
Trigger: CACATTTTTCAGCAGCGGTCAGTCCGCGGATGCCCA...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTGGACTACACCAATTTaGACCCGATCTGGTCCAATC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWWTTPI*TRSGPI
Trigger: GATTGGACCAGATCGGGTGCAAATTGGTGTAGTCCA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTGCCATCTCCTCCAATaGACTTGCAGAACAAACAGC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWCHLLQ*TCRTNS
Trigger: GCTGTTTGTTCTGCAAGTGCATTGGAGGAGATGGCA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTACCATAACCTGGACTaGCATCATTGCCCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFYHNLD*HHCPAS
Trigger: GCTTGCAGGGCAATGATGGCAGTCCAGGTTATGGTA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTACTGACTCGTGCACATaGCTCTTCATGAGGCGCTTA +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFTDSCT*LFMRRL
Trigger: TAAGCGCCTCATGAAGAGGCATGTGCACGAGTCAGT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTGCTATCTTTTCCAACTaGGTGTCGCTGGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLAIFSN*VSLAPS
Trigger: AGAGGGCGCCAGCGACACCCAGTTGGAAAAGATAGC...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTACTGCTCAGCAGGGTaGGATGCTATCTTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWYCSAG*DAIFSN
Trigger: GTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCGAAGGTCTTCAGTTTaGAGACATACTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWRRSSV*RHTAQQ
Trigger: CTGCTGAGCAGTATGTCTCCAAACTGAAGACCTTCG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTAAGTACTGCCACCCATaGCTTGGTCATTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFKYCHP*LGHSGA
Trigger: TGCTCCAGAATGACCAAGCCATGGGTGGCAGTACTT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCGAGAATATTTTTCCATaGCATTGGTCACTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATENIFP*HWSLEK
Trigger: CTTTTCAAGTGACCAATGCCATGGAAAAATATTCTC...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTACCTTGCTCTCCCACTaGTCCAGGGGCTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSTLLSH*SRGSSF
Trigger: GAAAGAGGAGCCCCTGGACCAGTGGGAGAGCAAGGT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGCCTGCTGTTCCCTGTaGGCCTGTATGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSACCSL*ACMSPS
Trigger: AGAAGGGGACATACAGGCCCACAGGGAACAGCAGGC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAGTTATAGGAGAGGATaGCGATGTGCGCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLSYRRG*RCALPR
Trigger: CCGTGGGAGCGCACATCGCCATCCTCTCCTATAACT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCCACGGTTGAATTCATaGATGTGGAACACCCACAGA +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWPRLNS*MWNTHR
Trigger: TCTGTGGGTGTTCCACATCCATGAATTCAACCGTGG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGTGGGGCTGAAGTACTaGGACACAAAGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSVGLKY*DTKLRA
Trigger: TGCCCTGAGCTTTGTGTCTCAGTACTTCAGCCCCAC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTGCCCATGTCTGGCCTaGAGTAATGTTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSCPCLA*SNVPPP
Trigger: GGGAGGTGGAACATTACTTCAGGCCAGACATGGGCA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATTTCCCTGGGCTTCCCTaGGATCCCTCATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDFPGLP*DPSSPF
Trigger: AAAGGGAGATGAGGGATCTCAGGGAAGCCCAGGGAA...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTCGGTCTCGCACATACTaGATGAGCTCACATGTAGAA +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFRSRTY*MSSHVE
Trigger: TTCTACATGTGAGCTCATTCAGTATGTGCGAGACCG...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCTTCTTGTAGGCGTCTaGGAAGCGCACAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDLLVGV*EAHKVP
Trigger: AGGCACCTTGTGCGCTTCTCAGACGCCTACAAGAAG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCAAAAACACAACATCTaGATACTCAGGGCCGGAATC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWQKHNI*ILRAGI
Trigger: GATTCCGGCCCTGAGTATGCAGATGTTGTGTTTTTG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTCCTCGCTGCTTCTTTaGTTTTTGCAACAGACTCAG +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWSSLLL*FLQQTQ
Trigger: CTGAGTCTGTTGCAAAAAGCAAAGAAGCAGCGAGGA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTGCCATCTCCTCCAATaGACTTGCAGAACAAACAGC +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFCHLLQ*TCRTNS
Trigger: GCTGTTTGTTCTGCAAGTGCATTGGAGGAGATGGCA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTTCCTTCTTGTCCCTTTaGTCCCTTGCGTCCGACACT +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLSFLSL*SLASDT
Trigger: AGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGA...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGAATGGTCGTGGGGGCTaGTTTGGATCTATAGAGTTA +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWNGRGG*FGSIEL
Trigger: TAACTCTATAGATCCAAAGCAGCCCCCACGACCATT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAAAATGGTCGTGGGGGCTaGTTTGGATCTATAGAGTTA +
Preference number: 4 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQNGRGG*FGSIEL
Trigger: TAACTCTATAGATCCAAAGCAGCCCCCACGACCATT...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAAGAGGGGGACAGTCTaGCTAACAGGGCCATTGCTA +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLKRGTV*LTGPLL
Trigger: TAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTCAGGGCCGGAATCTTaGTTCACAGAAATATGGGAA +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWSGPES*FTEIWE
Trigger: TTCCCATATTTCTGTGAACCAAGATTCCGGCCCTGA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGCCTTCAAGTCCATCTaGTCCTGGGATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSAFKSI*SWDACC
Trigger: ACAGCAGGCATCCCAGGACCAGATGGACTTGAAGGC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTAAACACCAACTCGGTTaGGTGCACTGGGCATTCCGG +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSKHQLG*VHWAFR
Trigger: CCGGAATGCCCAGTGCACCCAACCGAGTTGGTGTTT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTTTAATCATGTTGTTTaGGAGCACTTTCTATCATCC +
Preference number: 4 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLFNHVV*EHFLSS
Trigger: GGATGATAGAAAGTGCTCCCAAACAACATGATTAAA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTATCAGAAGTACGGATaGGAATCAAGCCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWYQKYG*ESSPNS
Trigger: GGAGTTAGGGCTTGATTCCCATCCGTACTTCTGATA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTGTCTGCCCTTTCTCCTaGGTTGAGACATCAAATCCC +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLVCPFS*VETSNP
Trigger: GGGATTTGATGTCTCAACTCAGGAGAAAGGGCAGAC...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCCAGAGCAACAGTTATaGGGGCATTCAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLPEQQL*GHSGLL
Trigger: AAGAAGGCCTGAATGCCCTCATAACTGTTGCTCTGG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTATCAGCCAAGTCACTTaGATCAGCAGGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLISQVT*ISRSIQ
Trigger: CTGGATGGACCTGCTGATTCAAGTGACTTGGCTGAT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCTCAGCAGGGTGGGATaGTATCTTTTCCAACTGGGT +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLLSRVG*YLFQLG
Trigger: ACCCAGTTGGAAAAGATAGCATCCCACCCTGCTGAG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCAGTGTGAAATTCAGTaGTGCGCCTGTGTTTGTATT +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWQCEIQ*CACVCI
Trigger: AATACAAACACAGGCGCAGCACTGAATTTCACACTG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTTGCCGAAGCACTACTaGTGGTTCCTTTACTATGTC +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFLPKHY*WFLYYV
Trigger: GACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCAA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTATGATTACACCTTCTTaGCGAAGCACTACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFMITPS*RSTTAG
Trigger: ACCAGCAGTAGTGCTTCGGCAAGAAGGTGTAATCAT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGCAACATTGACCAGCTaGTTTGACAGCCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDATLTS*FDSRLP
Trigger: TGGAAGCCGGCTGTCAAAGCAGCTGGTCAATGTTGC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCAGGATCTCCCATTGTaGCATCTCCTCCAATGCACT +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLQDLPL*HLLQCT
Trigger: AGTGCATTGGAGGAGATGGCACAATGGGAGATCCTG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGAAGAAGCATCTGGCTTaGACACATCATAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWKKHLA*THHSRK
Trigger: CTTTCTGCTATGATGTGTGCAAGCCAGATGCTTCTT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAAAAGAAGCATCTGGCTTaGACACATCATAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQKKHLA*THHSRK
Trigger: CTTTCTGCTATGATGTGTGCAAGCCAGATGCTTCTT...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTCTTAATACCAATGAATaGAGGGGGTCAAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFLNTNE*RGSSHL
Trigger: CAGGTGACTTGACCCCCTGCATTCATTGGTATTAAG...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTATATCAGTCGTAGAGTaGTGGAATTGTCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFISVVE*WNCQEW
Trigger: CCACTCCTGACAATTCCAGCACTCTACGACTGATAT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGTGTCAGTATCCATCTaGTCCATGCATCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSVSVSI*SMHPGR
Trigger: CCTGCCTGGATGCATGGAGCAGATGGATACTGACAC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTTGGCATTGTCATGTTaGCTTGGCTTTGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWLALSC*LGFVSL
Trigger: AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCAAATGGGAAGGACTTaGATCCCAGGCGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDQMGRT*IPGDQS
Trigger: GCTCTGATCGCCTGGGATCCAAGTCCTTCCCATTTG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCTGCCACCCATGGCTTaGTCATTCTGGAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDLPPMA*SFWSTE
Trigger: TTCAGTGCTCCAGAATGACCAAGCCATGGGTGGCAG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTGACACTACCATAACCTaGACTGCCATCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLDTTIT*TAIIAL
Trigger: CAGGGCAATGATGGCAGTCCAGGTTATGGTAGTGTC...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGCTTCGGAATGGTCGTaGGGGCTGCTTTGGATCTAT +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSASEWS*GLLWIY
Trigger: ATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTAACAAAGCTTCGGAATaGTCGTGGGGGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSNKASE*SWGLLW
Trigger: CCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTTTCCGCAGGGCCTTTaGTGCCTCTTCCACATTATC +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSFPQGL*CLFHII
Trigger: GATAATGTGGAAGAGGCATCAAAGGCCCTGCGGAAA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGCACCCCTACAGAGATaGTTTTCACTCCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDAPLQR*FSLRLS
Trigger: GGAAAGACGGAGTGAAAATCATCTCTGTAGGGGTGC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTATGCCCATGCTCAGTaGATTTATCACTTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWYAHAQ*IYHFCL
Trigger: GAGACAAAAGTGATAAATTCACTGAGCATGGGCATA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCCTTTGCCGTGGCATTaGGTTTATCAGCATCATGGG +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDPLPWH*VYQHHG
Trigger: CCCATGATGCTGATAAACTCAATGCCACGGCAAAGG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGGCCTTTCCCAAATCCTaGTTGTTGGAGTATTTATTG +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWAFPKS*LLEYLL
Trigger: CAATAAATACTCCAACAAGCAGGATTTGGGAAAGGC...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTGTATTCCCACCCATCTaGCTGATATTCTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLVFPPI*LIFSMA
Trigger: GGCCATTGAGAATATCAGGCAGATGGGTGGGAATAC...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTGCTATCCTTGGACATaGCATTTGTCAGGACAACAA +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFCYPWT*HLSGQQ
Trigger: TTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTTTGCAGGCTCCAAGATaGTATCCTTGGACATGCCAT +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLLQAPR*YPWTCH
Trigger: ATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAA...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCAGCTTTCATCTCTTTaGAAGCTTCTTCAGTACAGA +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWQLSSL*KLLQYR
Trigger: TCTGTACTGAAGAAGCTTGCAAAGAGATGAAAGCTG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGATTCTTCACGGGGGCTaGATATTCCAAAAACAAGAT +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWILHGG*IFQKQD
Trigger: ATCTTGTTTTTGGAATATGCAGCCCCCGTGAAGAAT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTTTGAAATGTCGCTTTaGGACATGAATCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWFEMSL*DMNLLS
Trigger: GCTCAACAGATTCATGTCCCAAAGCGACATTTCAAA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCACTACCAGTCAGGGTaGTTTGTCCAATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSHYQSG*FVQCEP
Trigger: TGGCTCACATTGGACAAACCACCCTGACTGGTAGTG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTATAAAACAGCACCTCTaGGTCATCAGCATACTTCAG +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFIKQHL*VISILQ
Trigger: CTGAAGTATGCTGATGACCCAGAGGTGCTGTTTTAT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGGATCCCATCTCTCCTaGAAGCCCAGCAGATATCAT +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDGSHLS*KPSRYH
Trigger: ATGATATCTGCTGGGCTTCCAGGAGAGATGGGATCC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTATGAAGCCAAGCCTTTaGCTCCTTTCACACCCTTAC +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLMKPSL*LLSHPY
Trigger: GTAAGGGTGTGAAAGGAGCCAAAGGCTTGGCTTCAT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCCCCATCTAAGTGGCTaGTTTCCCCAGCAGATATCA +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDPHLSG*FPQQIS
Trigger: TGATATCTGCTGGGGAAACCAGCCACTTAGATGGGG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGAAATCTGAATGTCCTTaGTGTCAGTATCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: MKQFFDISVVECWNCQEWKSECP*CQYPSA
Trigger: AGCAGATGGATACTGACACCAAGGACATTCAGATTT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAAAAATCTGAATGTCCTTaGTGTCAGTATCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQKSECP*CQYPSA
Trigger: AGCAGATGGATACTGACACCAAGGACATTCAGATTT...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR TCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCGTTTCAGTCCTCTCTaGAAAGACAGAGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSRFSPL*KDRDCV
Trigger: CACACAGTCTCTGTCTTTTCAGAGAGGACTGAAACG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTGTGGTTTGTCCAATGTaGGCCATTTGGTCTATTGCA +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLVVCPM*AIWSIA
Trigger: TGCAATAGACCAAATGGCTCACATTGGACAAACCAC...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTCCTTTACTATGTCCTaGGCTTCACCATCCGTGATG +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSSFTMS*ASPSVM
Trigger: CATCACGGATGGTGAAGCTCAGGACATAGTAAAGGA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTGCCAGAGCTATCAATaGCAAACACAACGTCTAAAA +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFCQSYQ*QTQRLK
Trigger: TTTTAGACGTTGTGTTTGTCATTGATAGCTCTGGCA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTGTCCACTGTAAGGCATaGCCAATAAAAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLVHCKA*PIKASP
Trigger: TGGAGATGCTTTTATTGGTCATGCCTTACAGTGGAC...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATAAGGCATATCCCTaGCATTTGGCTCGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLNKAYP*HLARKD
Trigger: ATCCTTGCGAGCCAAATGTCAGGGATATGCCTTATT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATTCTCCCATTTGCGGGTaGAGAGAAATAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDSPICG*REISPV
Trigger: CACAGGACTTATTTCTCTGCACCCGCAAATGGGAGA...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCCGACTGCCATTCCGTaGACTAAAAACTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDPTAIP*TKNFLP
Trigger: AGGAAGGAAGTTTTTAGTGCACGGAATGGCAGTCGG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAAGCAGATAGATGTCTaGTTCCTCAGTGTCCACACA +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLKQIDV*FLSVHT
Trigger: TGTGTGGACACTGAGGAAGCAGACATCTATCTGCTT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCCAAGATGCTATCCTTaGACATGCCATTTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLPRCYP*TCHLSG
Trigger: TCCTGACAAATGGCATGTCCAAGGATAGCATCTTGG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAGTTTATCAGCATCATaGGATTCCCCATCGGTGATC +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLSLSAS*DSPSVI
Trigger: GATCACCGATGGGGAATCCCATGATGCTGATAAACT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TCTGTAGGTGGTAAGATTGAACTCAGCTCTAACTGGACTCTTCTGAGTGTTGGGTGCATTGAGAAGAGATaGTCCTTTAACTGTTATATC +
Preference number: 4 (lower is better)
Translates to: SVGGKIELSSNWTLLSVGCIEKR*SFNCYI
Trigger: GATATAACAGTTAAAGGACCATCTCTTCTCAATGCA...CCCAACACTCAGAAGAGTCCAGTTAGAGCTGAGTTCAATCTTACCACCTACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTATTTCCCCATCTAAGTaGCTGGTTTCCCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSISPSK*LVSPAD
Trigger: ATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAAT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAGGTGGAATTCACTGTaGAGTTTATCACTGTACTGG +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLRWNSL*SLSLYW
Trigger: CCAGTACAGTGATAAACTTCACAGTGAATTCCACCT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGGAACCACTATTACTTaGAATGTGCCAGTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSGTTIT*NVPVSS
Trigger: TGACGACACTGGCACATTTCAAGTAATAGTGGTTCC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGGGGTGATTTCAAAGTaGTCTAATAGTGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDGVISK*SNSAPR
Trigger: CCTTGGAGCACTATTAGATCACTTTGAAATCACCCC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTCTCCGGCTCTGGGGTaGTTTCAAAGTGATCTAATA +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSSPALG*FQSDLI
Trigger: TATTAGATCACTTTGAAATCACCCCAGAGCCGGAGA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCTACAAACTGTTGCTTaGGTTCTGGCAGCAGATTTA +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLLQTVA*VLAADL
Trigger: TAAATCTGCTGCCAGAACTCAAGCAACAGTTTGTAG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTAAAGATGTCATCAACTaGTCCCTCCTTGTACTTTAT +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFKDVIN*SLLVLY
Trigger: ATAAAGTACAAGGAGGGAGCAGTTGATGACATCTTT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCTACTTTTGAAGAGTTaGAGACACTGGCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLLLLKS*RHWLSH
Trigger: ATGTGACAGCCAGTGTCTGCAACTCTTCAAAAGTAG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTGTTTAACTGACTCGTaGACATGCCTCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSCLTDS*TCLFMR
Trigger: CCTCATGAAGAGGCATGTGCACGAGTCAGTTAAACA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTACTCTGATCTCTTTTaGATCTCTGCAACTGCATAT +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFYSDLF*ISATAY
Trigger: ATATGCAGTTGCAGAGATGCAAAAGAGATCAGAGTA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTAATTTGCACCCGATCTaGTCCAATCTGAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSNLHPI*SNLRLA
Trigger: AGCAAGTCTCAGATTGGACCAGATCGGGTGCAAATT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTTGATGTCGCTGAACTaGACTACACCAATTTGCACC +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSLMSLN*TTPICT
Trigger: GGTGCAAATTGGTGTAGTCCAGTTCAGCGACATCAA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTCGTGGGGGCTGCTTTaGATCTATAGAGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSSWGLL*IYRVKS
Trigger: AGACTTAACTCTATAGATCCAAAGCAGCCCCCACGA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTAGTGGTGTGTTTAAGTaGAATAGAAGGTCACGTTTT +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFSGVFK*NRRSRF
Trigger: AAAACGTGACCTTCTATTCCACTTAAACACACCACT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGATTGCACGCCTGATTaGGTTTATAAAGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDDCTPD*VYKGLH
Trigger: GTGAAGTCCTTTATAAACTCAATCAGGCGTGCAATC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCAAGGCCAACCCTCATaGAATTTTCCTTTATGTCAA +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLQGQPS*NFPLCQ
Trigger: TTGACATAAAGGAAAATTGCATGAGGGTTGGCCTTG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTACTTTGTTTCCTCGCTaGTTCTTTGCTTTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLTLFPR*FFAFCN
Trigger: GTTGCAAAAAGCAAAGAAGCAGCGAGGAAACAAAGT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATTCCAGAGTCTTACCATaGTTCCTAAGGCTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDSRVLP*FLRLSC
Trigger: ACAACTTAGCCTTAGGAAGCATGGTAAGACTCTGGA...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGAACATTTTCACAAATaGGAAGGACTTGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDEHFHK*EGLGSQ
Trigger: CTGGGATCCAAGTCCTTCCCATTTGTGAAAATGTTC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATACTGTGTGTGTTATTTaGTTCCGCAGCTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDTVCVI*FRSFFR
Trigger: TCTGAAGAAGCTGCGGAACCAAATAACACACACAGT...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTGCATTGAGAAGAGATaGTCCTTTAACTGTTATATC +
Preference number: 4 (lower is better)
Translates to: KITLFSSVQANNSHSGVFCIEKR*SFNCYI
Trigger: GATATAACAGTTAAAGGACCATCTCTTCTCAATGCA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCTTTCCTCGAGCAGCTaGTTTATTCTGAAATGTATC +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDLSSSS*FILKCI
Trigger: GATACATTTCAGAATAAATCAGCTGCTCGAGGAAAG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGAAAGGTTCTGTATATaGTGGAGAACCTCTGACTTA +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSERFCI*WRTSDL
Trigger: TAAGTCAGAGGTTCTCCAGCATATACAGAACCTTTC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTTTACCTCCAGTTTTGTaGCAAAGTCATCCAGATAAA +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLLPPVL*QSHPDK
Trigger: TTTATCTGGATGACTTTGGCACAAAACTGGAGGTAA...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCTATTACTTGAAATGTaGCAGTGTCGTCAATCGCAA +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDLLLEM*QCRQSQ
Trigger: TTGCGATTGACGACACTGGCACATTTCAAGTAATAG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTCTGAAGACATGAGGTaGTATCACTGGATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSSEDMR*YHWISL
Trigger: TAGAGAAATCCAGTGATAGCACCTCATGTCTTCAGA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAAAACTGTCAGAAAATaGCAGTCGTTCAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLKTVRK*QSFRNV
Trigger: GACATTTCTGAACGACTGGCATTTTCTGACAGTTTT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR TCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGCAGCTGATTTATTCTaGAATGTATCCCATAGAGAA +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDAADLF*NVSHRE
Trigger: TTCTCTATGGGATACATTTCAGAATAAATCAGCTGC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR GCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCAAGATCATCTTCAATaGGCTGCAGAATGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSQDHLQ*AAECQN
Trigger: ATTTTGACATTCTGCAGCGCATTGAAGATGATCTTG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCTGCTAATCCTGTTTTaGTGCTGTTTATTATTGACT +
Preference number: 4 (lower is better)
Translates to: LVEIANLALSCCLGFVSLLLILF*CCLLLT
Trigger: AGTCAATAATAAACAGCACCAAAACAGGATTAGCAG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR GCA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTCTTATGTCTTTCAATaGATCAAAGTCATGCACGTA +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALALFPLMSSYVFQ*IKVMHV
Trigger: TACGTGCATGACTTTGATGCATTGAAAGACATAAGA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CCA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGAGAATATTTTTCCATaGCATTGGTCACTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: ITKLGKEDGFAENELDRDENIFP*HWSLEK
Trigger: CTTTTCAAGTGACCAATGCCATGGAAAAATATTCTC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
3UTR CAA 72 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTaGTTTCCCTTAATGTCTGCTAAGACCATATTTACA +
Preference number: 4 (lower is better)
Translates to: KLQIWHCHVALA*FPLMSAKTIFT
Trigger: TGTAAATATGGTCTTAGCAGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp GCTACTGTCAACTCCAGGAGCTCCGGGATCCCCTCGCAGGCCCTTTaGTCCACGGTCACCAGGAGTCCCTCTCTTCCCTGGGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: ATVNSRSSGIPSQAL*STVTRSPSLPWASL
Trigger: CAGGGAAGCCCAGGGAAGAGAGGGACTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGGGATCCCGGAGCTCCTGGAGTTGACAGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp CCAGTTTGCAGCCCGTGCACTTACGGGATCCCCTCGCAGGCCCTTTaGTCCACGGTCACCAGGAGTCCCTCTCTTCCCTGGGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PVCSPCTYGIPSQAL*STVTRSPSLPWASL
Trigger: CAGGGAAGCCCAGGGAAGAGAGGGACTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGGGATCCCGTAAGTGCACGGGCTGCAAACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS CCA 90 bp ATCCCGGGAGTGGTCCAGGGCAAACACCAACTCGGTTGGGTGCACTaGGCATTCCGGTTTTCCATGCCTGCCAGGACTGCGGTCTCGCAC +
Preference number: 5 (lower is better)
Translates to: IPGVVQGKHQLGWVH*AFRFSMPARTAVSH
Trigger: GTGCGAGACCGCAGTCCTGGCAGGCATGGAAAACCGGAATGCCCAGTGCACCCAACCGAGTTGGTGTTTGCCCTGGACCACTCCCGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp GTGACATCCCGGGAGTGGTCCAGGGCAAACACCAACTCGGTTGGGTaGACTGGGCATTCCGGTTTTCCATGCCTGCCAGGACTGCGGTCT +
Preference number: 5 (lower is better)
Translates to: VTSREWSRANTNSVG*TGHSGFPCLPGLRS
Trigger: AGACCGCAGTCCTGGCAGGCATGGAAAACCGGAATGCCCAGTGCACCCAACCGAGTTGGTGTTTGCCCTGGACCACTCCCGGGATGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp CTCAGTGACATCCCGGGAGTGGTCCAGGGCAAACACCAACTCGGTTaGGTGCACTGGGCATTCCGGTTTTCCATGCCTGCCAGGACTGCG +
Preference number: 5 (lower is better)
Translates to: LSDIPGVVQGKHQLG*VHWAFRFSMPARTA
Trigger: CGCAGTCCTGGCAGGCATGGAAAACCGGAATGCCCAGTGCACCCAACCGAGTTGGTGTTTGCCCTGGACCACTCCCGGGATGTCACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 90 bp CCCCTTGTTCAGGCGGCTGCCCCGGGCTTCAGTGAACATGTGGTCTaGGAAGCCCAGTGCCTCAGCAGTATAAGTACTGCCACCCATGGC +
Preference number: 5 (lower is better)
Translates to: PLVQAAAPGFSEHVV*EAQCLSSISTATHG
Trigger: GCCATGGGTGGCAGTACTTATACTGCTGAGGCACTGGGCTTCTCAGACCACATGTTCACTGAAGCCCGGGGCAGCCGCCTGAACAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp AGAAGTACGGATGGGAATCAAGCCCTAACTCCAGTTTGCAGCCCGTaGACTTACGGGATCCCCTCGCAGGCCCTTTGCTCCACGGTCACC +
Preference number: 5 (lower is better)
Translates to: RSTDGNQALTPVCSP*TYGIPSQALCSTVT
Trigger: GGTGACCGTGGAGCAAAGGGCCTGCGAGGGGATCCCGTAAGTGCACGGGCTGCAAACTGGAGTTAGGGCTTGATTCCCATCCGTACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTCCCCTCGCAGGCCCTTaGCTCCACGGTCACCAGGAG +
Preference number: 5 (lower is better)
Translates to: ESFLSLCSLASDTTITWTPLAGP*LHGHQE
Trigger: CTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGGG...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCGCTTCCCAAACGGCCTaGATTCCCTGCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVASQTA*IPCLSS
Trigger: GGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGC...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS GCA 90 bp TGCCTTGTCTTCCACGTTCTCCTTTCAAGCCTGTGGGTCCTTCTATaGTACTGTCAACTCCAGGAGCTCCGGGATCCCCTCGCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: CLVFHVLLSSLWVLL*YCQLQELRDPLAGP
Trigger: AGGGCCTGCGAGGGGATCCCGGAGCTCCTGGAGTTGACAGTAGCATAGAAGGACCCACAGGCTTGAAAGGAGAACGTGGAAGACAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp CTCCCTATCAGAAGTACGGATGGGAATCAAGCCCTAACTCCAGTTTaGAGCCCGTGCACTTACGGGATCCCCTCGCAGGCCCTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LPIRSTDGNQALTPV*SPCTYGIPSQALCS
Trigger: GGAGCAAAGGGCCTGCGAGGGGATCCCGTAAGTGCACGGGCTGCAAACTGGAGTTAGGGCTTGATTCCCATCCGTACTTCTGATAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS CCA 90 bp AGGACCTTTGGTGCCATAGCATCCCTTAGTACCTTGCTCTCCCACTaGTCCAGGGGCTCCTCTTTCTCCAGCGATTCCCTCCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: RTFGAIASLSTLLSH*SRGSSFSSDSLLSQ
Trigger: CTGGGAGAGGAGGGAATCGCTGGAGAAAGAGGAGCCCCTGGACCAGTGGGAGAGCAAGGTACTAAGGGATGCTATGGCACCAAAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358511.10
ENST00000506143.5
ENST00000511332.1
CDS CCA 90 bp GAAGTTGACTCTTCTTGTAGGCGTCTGAGAAGCGCACAAGGTGCCTaGCGTGGGAGTTATAGGAGAGGATGGCGATGTGCGCTCCCACGG +
Preference number: 5 (lower is better)
Translates to: EVDSSCRRLRSAQGA*RGSYRRGWRCALPR
Trigger: CCGTGGGAGCGCACATCGCCATCCTCTCCTATAACTCCCACGCCAGGCACCTTGTGCGCTTCTCAGACGCCTACAAGAAGAGTCAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTGGGCCACCTCGTCTaGGGACTGGCCATCTGTAAG +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLLGHLV*GLAICK
Trigger: CTTACAGATGGCCAGTCCCAAGACGAGGTGGCCCAG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCGCTTCCCAAACGGCCTaGATTCCCTGCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVIASQTA*IPCLSS
Trigger: GGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGC...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCAAACACCAACTCGGTaGGGTGCACTGGGCATTCCG +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVQTPTR*GALGIP
Trigger: CGGAATGCCCAGTGCACCCAACCGAGTTGGTGTTTG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 90 bp AACTTTCTGATGTTGGGCCGGGCGCCCTTGGTGGGGCTGAAGTACTaGGACACAAAGCTCAGGGCACTACCAGTCAGGGTGGTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: NFLMLGRAPLVGLKY*DTKLRALPVRVVCP
Trigger: TGGACAAACCACCCTGACTGGTAGTGCCCTGAGCTTTGTGTCTCAGTACTTCAGCCCCACCAAGGGCGCCCGGCCCAACATCAGAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCAGGACAAGAATGCCTTaGTCCCGCAAGGCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVRTRMP*SRKAFA
Trigger: GGCAAAGGCCTTGCGGGACAAAGGCATTCTTGTCCT...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCGTCCAGGATCTCCCATaGTGCCATCTCCTCCAATGC +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVVQDLP*CHLLQC
Trigger: GCATTGGAGGAGATGGCACAATGGGAGATCCTGGAC...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp CGGCCCCGGAGGGAACCACTATTACTTGAAATGTGCCAGTGTCGTCAATCATGCCCTGGACTGCCATCATaGCCCTGCAAGCCACGAGGA +
Preference number: 5 (lower is better)
Translates to: RPRREPLLLEMCQCRQSCPGLPS*PCKPRG
Trigger: TCCTCGTGGCTTGCAGGGCAATGATGGCAGTCCAGG...GCATGATTGACGACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCATCCTTCTTGTCCCTTaGCTCCCTTGCGTCCGACAC +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVILLVP*LPCVRH
Trigger: GTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGAT...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTCCAGGGAATCCTTCTaGTCCCTTTGCTCCCTTGCG +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVSRESF*SLCSLA
Trigger: CGCAAGGGAGCAAAGGGACAAGAAGGATTCCCTGGA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTGACCGAGGGCACGTaGCTGAAAGTGATCACCACG +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLLTEGT*LKVITT
Trigger: CGTGGTGATCACTTTCAGCAACGTGCCCTCGGTCAG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGAGGGGGTGGTCTGGCTaGGTCACAAGAAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLRGWSG*VTRSIW
Trigger: CCAGATGCTTCTTGTGACCAAGCCAGACCACCCCCT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS GCA 90 bp AGCGAAGGTCTTCAGTTTGGAGACATACTGCTCAGCAGGGTGGGATaGTATCTTTTCCAACTGGGTGTCGCTGGCGCCCTCTATGCCCAG +
Preference number: 5 (lower is better)
Translates to: SEGLQFGDILLSRVG*YLFQLGVAGALYAQ
Trigger: CTGGGCATAGAGGGCGCCAGCGACACCCAGTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTATGTCTCCAAACTGAAGACCTTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp TTGGAGACATACTGCTCAGCAGGGTGGGATGCTATCTTTTCCAACTaGGTGTCGCTGGCGCCCTCTATGCCCAGGGTGAAGATGGTCACA +
Preference number: 5 (lower is better)
Translates to: LETYCSAGWDAIFSN*VSLAPSMPRVKMVT
Trigger: TGTGACCATCTTCACCCTGGGCATAGAGGGCGCCAGCGACACCCAGTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTATGTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp CAGCAGCACCTGTGGGGTACCTGTATTTATCCTGCTGCCCATGTCTaGCCTGAAGTAATGTTCCACCTCCCTGAGTGCAGCACCGATGTG +
Preference number: 5 (lower is better)
Translates to: QQHLWGTCIYPAAHV*PEVMFHLPECSTDV
Trigger: CACATCGGTGCTGCACTCAGGGAGGTGGAACATTACTTCAGGCCAGACATGGGCAGCAGGATAAATACAGGTACCCCACAGGTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTCAAGCTGGGTGACATaGGAGCCAAACACTCCCACA +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVSSWVT*EPNTPT
Trigger: TGTGGGAGTGTTTGGCTCCAATGTCACCCAGCTTGA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp GTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTGCCATCATTGCGTCCAGGATCTCCCATaGTGCCATCTCCTCCAATGC +
Preference number: 5 (lower is better)
Translates to: VPLLPCVRHYHNLDCHHCVQDLP*CHLLQC
Trigger: GCATTGGAGGAGATGGCACAATGGGAGATCCTGGAC...GCAATGATGGCAGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTGCCTAACAGGGCCATaGCTACCAACTGTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLCLTGP*LPTVEP
Trigger: TGGCTCCACAGTTGGTAGCAATGGCCCTGTTAGGCA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS CCA 90 bp AGGTCAGCGAAGGTCTTCAGTTTGGAGACATACTGCTCAGCAGGGTaGGATGCTATCTTTTCCAACTGGGTGTCGCTGGCGCCCTCTATG +
Preference number: 5 (lower is better)
Translates to: RSAKVFSLETYCSAG*DAIFSNWVSLAPSM
Trigger: CATAGAGGGCGCCAGCGACACCCAGTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTATGTCTCCAAACTGAAGACCTTCGCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp AGTACTTGTCGCTTGATCCTGCCATGGCTAACAGCTCCACGGGATTaGCACCATCAATCCCCACAGCCAGGACAAGAATGCCTTTGTCCC +
Preference number: 5 (lower is better)
Translates to: STCRLILPWLTAPRD*HHQSPQPGQECLCP
Trigger: GGGACAAAGGCATTCTTGTCCTGGCTGTGGGGATTGATGGTGCCAATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCGACAAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTTCTCTCAGCTGTGTTaGGTTGGCCTCCTTGATCCC +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLFSQLC*VGLLDP
Trigger: GGGATCAAGGAGGCCAACCAAACACAGCTGAGAGAA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTAGAAACTTTCTGATGTaGGGCCGGGCGCCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLRNFLM*GRAPLV
Trigger: CACCAAGGGCGCCCGGCCCAACATCAGAAAGTTTCT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTCACAGCTTACTCCATaGAGGGAGCTGATGGCACGT +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLSQLTP*RELMAR
Trigger: ACGTGCCATCAGCTCCCTCAATGGAGTAAGCTGTGA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCCAGCCTCTTCTGCCTaGTCTTCCACGTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLPASSA*SSTFSF
Trigger: AAAGGAGAACGTGGAAGACAAGGCAGAAGAGGCTGG...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS CCA 90 bp CTCCAAAAGTCTCCACGAAGAAGTACTTGTCGCTTGATCCTGCCATaGCTAACAGCTCCACGGGATTGGCACCATCAATCCCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: LQKSPRRSTCRLILP*LTAPRDWHHQSPQP
Trigger: TGGCTGTGGGGATTGATGGTGCCAATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCGACAAGTACTTCTTCGTGGAGACTTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp TCCAGGAGCTCCCTTGAAATCGAGACTCCCTATCAGAAGTACGGATaGGAATCAAGCCCTAACTCCAGTTTGCAGCCCGTGCACTTACGG +
Preference number: 5 (lower is better)
Translates to: SRSSLEIETPYQKYG*ESSPNSSLQPVHLR
Trigger: CCGTAAGTGCACGGGCTGCAAACTGGAGTTAGGGCTTGATTCCCATCCGTACTTCTGATAGGGAGTCTCGATTTCAAGGGAGCTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCACAAATGGGAAGGACTaGGATCCCAGGCGATCAGAG +
Preference number: 5 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATTNGKD*DPRRSE
Trigger: CTCTGATCGCCTGGGATCCAAGTCCTTCCCATTTGT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGGGCCATAGAAGGGCCTaGGCAAGCTTCTACAAAGAT +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLGHRRA*ASFYKD
Trigger: ATCTTTGTAGAAGCTTGCCAAGGCCCTTCTATGGCC...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCGACTGTGTGTGTTATTaGGTTCCGCAGCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVDCVCY*VPQLLQ
Trigger: CTGAAGAAGCTGCGGAACCAAATAACACACACAGTC...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTGATCACAATGAGGACTaGGGGGACCCCCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLDHNED*GDPLVQ
Trigger: CTGAACAAGGGGGTCCCCCAAGTCCTCATTGTGATC...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGACATCCACGAAACAGTaGCTTTCACCCGCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLTSTKQ*LSPAVV
Trigger: TACCACAGCGGGTGAAAGCAACTGTTTCGTGGATGT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGGCCCTTTCTCCTGAGTaGAGACATCAAATCCCACCA +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLALSPE*RHQIPP
Trigger: TGGTGGGATTTGATGTCTCAACTCAGGAGAAAGGGC...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp CCCCGGAAGCGTCCGCTTGAAGACATTCCTGGAAATAAACCGCATTaGTCTGCCAATCTCCCTGCTGGCAGAGGATCTCTCATAAGGAAT +
Preference number: 5 (lower is better)
Translates to: PRKRPLEDIPGNKPH*SANLPAGRGSLIRN
Trigger: ATTCCTTATGAGAGATCCTCTGCCAGCAGGGAGATTGGCAGAGCAATGCGGTTTATTTCCAGGAATGTCTTCAAGCGGACGCTTCCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGAATGAAGCCAAGCCTTaGGCTCCTTTCACACCCTTA +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLNEAKP*APFTPL
Trigger: TAAGGGTGTGAAAGGAGCCAAAGGCTTGGCTTCATT...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp TGCCTGCTGTTCCCTGTGGGCCTGTATGTCCCCTTCTGCCATGAGCTGCTGTCTATTGGTGGATATTTGTaGATTGCACGCCTGATTGAG +
Preference number: 5 (lower is better)
Translates to: CLLFPVGLYVPFCHELLSIGGYL*IARLIE
Trigger: CTCAATCAGGCGTGCAATCAACAAATATCCACCAAT...AGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGGGAACAGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCATAACCTACAAACTGTaGCTTGAGTTCTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVITYKL*LEFWQQ
Trigger: CTGCTGCCAGAACTCAAGCAACAGTTTGTAGGTTAT...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCCATGTTGCCTTGGCTTaGTTTCCCTTAATGTCTGCT +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVHVALA*FPLMSA
Trigger: AGCAGACATTAAGGGAAACAAAGCCAAGGCAACATG...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTACTCCAGGAGCTCCCTaGAAATCGAGACTCCCTATC +
Preference number: 5 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLTPGAP*KSRLPI
Trigger: GATAGGGAGTCTCGATTTCAAGGGAGCTCCTGGAGT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS TCA 90 bp CAGGAACGTCTTCATTTCATGGAAATCTGTGGCCTGGGTGCTCCCTaGGCCATCGATAAGCAGATAGATGTCTGCTTCCTCAGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: QERLHFMEICGLGAP*AIDKQIDVCFLSVH
Trigger: GTGGACACTGAGGAAGCAGACATCTATCTGCTTATCGATGGCTCAGGGAGCACCCAGGCCACAGATTTCCATGAAATGAAGACGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp CCTGCTGCCCATGTCTGGCCTGAAGTAATGTTCCACCTCCCTGAGTaGAGCACCGATGTGTGTGTTTCCAAAGATCTGCTTGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: PAAHVWPEVMFHLPE*STDVCVSKDLLDVF
Trigger: GAAAACATCAAGCAGATCTTTGGAAACACACACATCGGTGCTGCACTCAGGGAGGTGGAACATTACTTCAGGCCAGACATGGGCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCTTCTCTCAGTCTGTTaGCAGGCTCCAAGATGCTAT +
Preference number: 5 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATLLSVC*QAPRCY
Trigger: ATAGCATCTTGGAGCCTGCAAACAGACTGAGAGAAG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCGGGAACCACTATTACTaGAAATGTGCCAGTGTCGTC +
Preference number: 5 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATGNHYY*KCASVV
Trigger: GACGACACTGGCACATTTCAAGTAATAGTGGTTCCC...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATAAGATCCTCCAGTTCCTaGTCATCCCAAATAGGGCCA +
Preference number: 5 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSIRSSSS*SSQIGP
Trigger: TGGCCCTATTTGGGATGACAAGGAACTGGAGGATCT...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCCCTACAAACTGTTGCTaGAGTTCTGGCAGCAGATTT +
Preference number: 5 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVIPTNCC*SSGSRF
Trigger: AAATCTGCTGCCAGAACTCAAGCAACAGTTTGTAGG...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp TTTATTTCCTTGGCTTCCCAAACGGCCTTGATTCCCTGCCTCTCCTCCGGGTCCATAACCTACAAACTGTaGCTTGAGTTCTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FISLASQTALIPCLSSGSITYKL*LEFWQQ
Trigger: CTGCTGCCAGAACTCAAGCAACAGTTTGTAGGTTAT...GGACCCGGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGCCAAGGAAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTTTGGCATTGTCATGTaGCCTTGGCTTTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLFGIVM*PWLCFP
Trigger: AGGGAAACAAAGCCAAGGCAACATGACAATGCCAAA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp GAAATGTCTGGTTGTGAGCAGCCAGGTCAGCGAAGGTCTTCAGTTTaGAGACATACTGCTCAGCAGGGTGGGATGCTATCTTTTCCAACT +
Preference number: 5 (lower is better)
Translates to: EMSGCEQPGQRRSSV*RHTAQQGGMLSFPT
Trigger: AGTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTATGTCTCCAAACTGAAGACCTTCGCTGACCTGGCTGCTCACAACCAGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp ATGTTGAACATCCCTACCACCTCTGACAGGAACGTCTTCATTTCATaGAAATCTGTGGCCTGGGTGCTCCCTGAGCCATCGATAAGCAGA +
Preference number: 5 (lower is better)
Translates to: MLNIPTTSDRNVFIS*KSVAWVLPEPSISR
Trigger: TCTGCTTATCGATGGCTCAGGGAGCACCCAGGCCACAGATTTCCATGAAATGAAGACGTTCCTGTCAGAGGTGGTAGGGATGTTCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTTCTCCTCACTTCCATaGATTGACATATCCAATAGG +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVFSSLP*IDISNR
Trigger: CCTATTGGATATGTCAATCAATGGAAGTGAGGAGAA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTCAGCTTTCATCTCTTaGCAAGCTTCTTCAGTACAG +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLSAFIS*QASSVQ
Trigger: CTGTACTGAAGAAGCTTGCAAAGAGATGAAAGCTGA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCCCCTCGCAGGCCCTTaGCTCCACGGTCACCAGGAG +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSPLAGP*LHGHQE
Trigger: CTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGGG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTTCTCCTTTATTTCCTaGGCTTCCCAAACGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLFSFIS*ASQTAL
Trigger: CAAGGCCGTTTGGGAAGCCAAGGAAATAAAGGAGAA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp AGTGGTCCAGGAACAAAGCTTCGGAATGGTCGTGGGGGCTGCTTTGGATCTATAAATGAAGCCAAGCCTTaGGCTCCTTTCACACCCTTA +
Preference number: 5 (lower is better)
Translates to: SGPGTKLRNGRGGCFGSINEAKP*APFTPL
Trigger: TAAGGGTGTGAAAGGAGCCAAAGGCTTGGCTTCATT...TATAGATCCAAAGCAGCCCCCACGACCATTCCGAAGCTTTGTTCCTGGACCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAAAGGGGGTGGTCTGGCTaGGTCACAAGAAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQRGWSG*VTRSIW
Trigger: CCAGATGCTTCTTGTGACCAAGCCAGACCACCCCCT...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp CCTTCTTTAAGATTTCCCCATCTAAGTGGCTGGTTTCCCCAGCAGATATCACAAAGCCCTAACTCCAGTTaGCAGCCCGTGCACTTACGG +
Preference number: 5 (lower is better)
Translates to: PSLRFPHLSGWFPQQISQSPNSS*QPVHLR
Trigger: CCGTAAGTGCACGGGCTGCAAACTGGAGTTAGGGCT...TTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATCTTAAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS GCA 90 bp AAACTCGGATGTGCTCTTCTCTCAGTCTGTTTGCAGGCTCCAAGATaGTATCCTTGGACATGCCATTTGTCAGGACAACAAGGTGGCATG +
Preference number: 5 (lower is better)
Translates to: KLGCALLSVCLQAPR*YPWTCHLSGQQGGM
Trigger: CATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTGAGAGAAGAGCACATCCGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp GATCCCGATAGCATAAACTCGGATGTGCTCTTCTCTCAGTCTGTTTaGAGGCTCCAAGATGCTATCCTTGGACATGCCATTTGTCAGGAC +
Preference number: 5 (lower is better)
Translates to: DPDSINSDVLFSQSV*RLQDAILGHAICQD
Trigger: GTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTGAGAGAAGAGCACATCCGAGTTTATGCTATCGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTTTCCTCGCTGCTTCTTaGCTTTTTGCAACAGACTCA +
Preference number: 5 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLFLAAS*LFATDS
Trigger: TGAGTCTGTTGCAAAAAGCAAAGAAGCAGCGAGGAA...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCCGAACGATCCTTTTATaGACCTTCTTCAGTTCATCG +
Preference number: 5 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATRTILL*TFFSSS
Trigger: CGATGAACTGAAGAAGGTCAATAAAAGGATCGTTCG...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTGCTGTGGTACAGATGTaGCGAACGATCCTTTTATTG +
Preference number: 5 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLAVVQM*RTILLL
Trigger: CAATAAAAGGATCGTTCGCAACATCTGTACCACAGC...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGATCCTTCTTGTCCCTTaGCTCCCTTGCGTCCGACAC +
Preference number: 5 (lower is better)
Translates to: MKQFFDISVVECWNCQEWILLVP*LPCVRH
Trigger: GTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGAT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTCCAGGGAATCCTTCTaGTCCCTTTGCTCCCTTGCG +
Preference number: 5 (lower is better)
Translates to: MKQFFDISVVECWNCQEWSRESF*SLCSLA
Trigger: CGCAAGGGAGCAAAGGGACAAGAAGGATTCCCTGGA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp CTGCTCCATGCATCCAGGCAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTTTATTGGTGGATATTaGTTGATTGCACGCCTGATT +
Preference number: 5 (lower is better)
Translates to: LLHASRQGFFPFPKRGTVFIGGY*LIARLI
Trigger: AATCAGGCGTGCAATCAACAAATATCCACCAATAAA...GACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTGCCTGGATGCATGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp CACCCGGTCTCCAGTGACAGAAGTCTCCGGCTCTGGGGTGATTTCAAAGTGATCTTGGGTGTTTCGTTGTaGAAAATATCAGCCCTATCA +
Preference number: 5 (lower is better)
Translates to: HPVSSDRSLRLWGDFKVILGVSL*KISALS
Trigger: TGATAGGGCTGATATTTTCAACAACGAAACACCCAA...GATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGGAGACCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS TCA 90 bp GAGTATTTATTGATCTCAAATTCCAAGTCCCAGCTGTCAGCATACTaGACGGCCCCAACCCGCACCTTATGGGGAGCAATGTTGAACATC +
Preference number: 5 (lower is better)
Translates to: EYLLISNSKSQLSAY*TAPTRTLWGAMLNI
Trigger: GATGTTCAACATTGCTCCCCATAAGGTGCGGGTTGGGGCCGTTCAGTATGCTGACAGCTGGGACTTGGAATTTGAGATCAATAAATACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 90 bp CTTTGTTTCCTCGCTGCTTCTTTGCTTTTTGCAACAGACTCAGTGTaGAATTCAGTGCTGCGCCTGTGTTTGTATTCCCACCCATCTGCC +
Preference number: 5 (lower is better)
Translates to: LCFLAASLLFATDSV*NSVLRLCLYSHPSA
Trigger: GGCAGATGGGTGGGAATACAAACACAGGCGCAGCACTGAATTTCACACTGAGTCTGTTGCAAAAAGCAAAGAAGCAGCGAGGAAACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 90 bp CATCCAAGGCTGACCTTCAAGCAAAGTCTGCCCTTTCTCCTGAGTTaGGACATCAAATCCCACCACAACATCCACGAAACAGTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: HPRLTFKQSLPFLLS*DIKSHHNIHETVAF
Trigger: GAAAGCAACTGTTTCGTGGATGTTGTGGTGGGATTTGATGTCTCAACTCAGGAGAAAGGGCAGACTTTGCTTGAAGGTCAGCCTTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp CTTCTCTCAGTCTGTTTGCAGGCTCCAAGATGCTATCCTTGGACATaGCATTTGTCAGGACAACAAGGTGGCATGGAACTTTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLSVCLQAPRCYPWT*HLSGQQGGMELCFL
Trigger: GAGGAAACAAAGTTCCATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTGAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp CACTCCCACAGAATAGATGATTACACCTTCTTGCCGAAGCACTACTaGTGGTTCCTTTACTATGTCCTGAGCTTCACCATCCGTGATGAG +
Preference number: 5 (lower is better)
Translates to: HSHRIDDYTFLPKHY*WFLYYVLSFTIRDE
Trigger: CTCATCACGGATGGTGAAGCTCAGGACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCAAGAAGGTGTAATCATCTATTCTGTGGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp TGTGCTCTTCTCTCAGTCTGTTTGCAGGCTCCAAGATGCTATCCTTaGACATGCCATTTGTCAGGACAACAAGGTGGCATGGAACTTTGT +
Preference number: 5 (lower is better)
Translates to: CALLSVCLQAPRCYP*TCHLSGQQGGMELC
Trigger: ACAAAGTTCCATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTGAGAGAAGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCCTGGACTGCCATCATaGCCCTGCAAGCCACGAGGA +
Preference number: 5 (lower is better)
Translates to: LVEIANLALSCCLGFVSLPGLPS*PCKPRG
Trigger: TCCTCGTGGCTTGCAGGGCAATGATGGCAGTCCAGG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp CAGGGCTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGTCTGCTAATCCTGTTTaGGTGCTGTTTATTATTGAC +
Preference number: 5 (lower is better)
Translates to: QGFFPFPKRGTVCLTGPLSANPV*VLFIID
Trigger: GTCAATAATAAACAGCACCAAAACAGGATTAGCAGA...CAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp CTTCTTTCCATTCCCAAAGAGGGGGACAGTCTGCCTAACAGGGCCATTGCTACCACATTGGGTGTTTCGTaGTTGAAAATATCAGCCCTA +
Preference number: 5 (lower is better)
Translates to: LLSIPKEGDSLPNRAIATTLGVS*LKISAL
Trigger: TAGGGCTGATATTTTCAACAACGAAACACCCAATGT...GGTAGCAATGGCCCTGTTAGGCAGACTGTCCCCCTCTTTGGGAATGGAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS TCA 90 bp ACACCTTCTTGCCGAAGCACTACTGCTGGTTCCTTTACTATGTCCTaGGCTTCACCATCCGTGATGAGGATGAGAAACTTTCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: TPSCRSTTAGSFTMS*ASPSVMRMRNFLML
Trigger: CAACATCAGAAAGTTTCTCATCCTCATCACGGATGGTGAAGCTCAGGACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCAAGAAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp TCCCACAGAATAGATGATTACACCTTCTTGCCGAAGCACTACTGCTaGTTCCTTTACTATGTCCTGAGCTTCACCATCCGTGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: SHRIDDYTFLPKHYC*FLYYVLSFTIRDED
Trigger: ATCCTCATCACGGATGGTGAAGCTCAGGACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCAAGAAGGTGTAATCATCTATTCTGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGCTCAGGGCCGGAATCTaGGTTCACAGAAATATGGGA +
Preference number: 5 (lower is better)
Translates to: MKQFFDISVVECWNCQEWLRAGI*VHRNMG
Trigger: TCCCATATTTCTGTGAACCAAGATTCCGGCCCTGAG...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTAAATTACCTCCAGTTTaGTGCCAAAGTCATCCAGAT +
Preference number: 5 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLKLPPV*CQSHPD
Trigger: ATCTGGATGACTTTGGCACAAAACTGGAGGTAATTT...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp GAATCCTTCTTGTCCCTTTGCTCCCTTGCGTCCGACACTACCATAACCTGGACTCATCTCTGCCACTTCTaGCTACTCTTGAAAGATATT +
Preference number: 5 (lower is better)
Translates to: ESFLSLCSLASDTTITWTHLCHF*LLLKDI
Trigger: AATATCTTTCAAGAGTAGCAAGAAGTGGCAGAGATG...AGTCCAGGTTATGGTAGTGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGACTGTAATGCTGAGATaGGACTTCAGCCTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: MKQFFDISVVECWNCQEWTVMLR*DFSLEP
Trigger: TGGCTCCAGGCTGAAGTCCAATCTCAGCATTACAGT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 90 bp TTCCTCAGTGTCCACACAACCAGATTTGAGCGTTTCAGTCCTCTCTaGAAAGACAGAGACTGTGTGTGTTATTTGGTTCCGCAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: FLSVHTTRFERFSPL*KDRDCVCYLVPQLL
Trigger: AAGAAGCTGCGGAACCAAATAACACACACAGTCTCTGTCTTTTCAGAGAGGACTGAAACGCTCAAATCTGGTTGTGTGGACACTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp GATGCTATCCTTGGACATGCCATTTGTCAGGACAACAAGGTGGCATaGAACTTTGTTTCCTCGCTGCTTCTTTGCTTTTTGCAACAGACT +
Preference number: 5 (lower is better)
Translates to: DAILGHAICQDNKVA*NFVSSLLLCFLQQT
Trigger: AGTCTGTTGCAAAAAGCAAAGAAGCAGCGAGGAAACAAAGTTCCATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGTGCTGCGCCTGTGTTaGTATTCCCACCCATCTGCC +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSVLRLC*YSHPSA
Trigger: GGCAGATGGGTGGGAATACAAACACAGGCGCAGCAC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTCTGGACTACACCAATTaGCACCCGATCTGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: KITLFSSVQANNSHSGVFLDYTN*HPIWSN
Trigger: ATTGGACCAGATCGGGTGCAAATTGGTGTAGTCCAG...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTACCAGTCAGGGTGGTTaGTCCAATGTGAGCCATTTG +
Preference number: 5 (lower is better)
Translates to: KITLFSSVQANNSHSGVFTSQGG*SNVSHL
Trigger: CAAATGGCTCACATTGGACAAACCACCCTGACTGGT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTAAAACTTCAATCCGCTaGCATTCTTCACGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: KITLFSSVQANNSHSGVFKTSIR*HSSRGL
Trigger: CAGCCCCCGTGAAGAATGCAAGCGGATTGAAGTTTT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGTTCTCCTTTATTTCCTaGGCTTCCCAAACGGCCTTG +
Preference number: 5 (lower is better)
Translates to: MKQFFDISVVECWNCQEWFSFIS*ASQTAL
Trigger: CAAGGCCGTTTGGGAAGCCAAGGAAATAAAGGAGAA...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTCCAGCAGATATCATTTaGCCTCTAGCTCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KITLFSSVQANNSHSGVFPADII*PLAPFS
Trigger: GCTGAAGGGAGCTAGAGGCAAAATGATATCTGCTGG...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp TCTGAATGTCCTTGGTGTCAGTATCCATCTGCTCCATGCATCCAGGCAGGGCTTGTACTTAAAAATACATaGTCCAGAGTCCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: SECPWCQYPSAPCIQAGLVLKNT*SRVHCK
Trigger: CTTACAGTGGACTCTGGACAATGTATTTTTAAGTAC...AAGCCCTGCCTGGATGCATGGAGCAGATGGATACTGACACCAAGGACATTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS TCA 90 bp AGCAGTATAAGTACTGCCACCCATGGCTTGGTCATTCTGGAGCACTaGAATTACCTCCAGTTTTGTGCCAAAGTCATCCAGATAAAACAG +
Preference number: 5 (lower is better)
Translates to: SSISTATHGLVILEH*NYLQFCAKVIQIKQ
Trigger: CTGTTTTATCTGGATGACTTTGGCACAAAACTGGAGGTAATTTCAGTGCTCCAGAATGACCAAGCCATGGGTGGCAGTACTTATACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTAGGTGGCATGGAACTTaGTTTCCTCGCTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KITLFSSVQANNSHSGVFRWHGT*FPRCFF
Trigger: AAAGAAGCAGCGAGGAAACAAAGTTCCATGCCACCT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTAACAGCTCCACGGGATaGGCACCATCAATCCCCACA +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSNSSTG*APSIPT
Trigger: TGTGGGGATTGATGGTGCCAATCCCGTGGAGCTGTT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCCCGGAAGCGTCCGCTaGAAGACATTCCTGGAAATA +
Preference number: 5 (lower is better)
Translates to: LVEIANLALSCCLGFVSLPGSVR*KTFLEI
Trigger: TATTTCCAGGAATGTCTTCAAGCGGACGCTTCCGGG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 90 bp AGTCAGGGTGGTTTGTCCAATGTGAGCCATTTGGTCTATTGCATTTaGAATGTCGCTTTGGGACATGAATCTGTTGAGCTGAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: SQGGLSNVSHLVYCI*NVALGHESVELKLF
Trigger: GAAGAGTTTCAGCTCAACAGATTCATGTCCCAAAGCGACATTTCAAATGCAATAGACCAAATGGCTCACATTGGACAAACCACCCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCCTTGGACATGCCATTaGTCAGGACAACAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSPWTCH*SGQQGG
Trigger: GCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCTCAGCTGTGTTTGGTaGGCCTCCTTGATCCCGATA +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSLSCVW*ASLIPI
Trigger: TATCGGGATCAAGGAGGCCAACCAAACACAGCTGAG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTGATGATTACACCTTCTaGCCGAAGCACTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: LVEIANLALSCCLGFVSLDDYTF*PKHYCW
Trigger: CCAGCAGTAGTGCTTCGGCAAGAAGGTGTAATCATC...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGGCTGACATCAAAGTCTaGAACAACAGATGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: MKQFFDISVVECWNCQEWADIKV*NNRCQK
Trigger: TTTCTGGCATCTGTTGTTCAAGACTTTGATGTCAGC...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTGATCAGCCAAGTCACTaGAATCAGCAGGTCCATCCA +
Preference number: 5 (lower is better)
Translates to: LVEIANLALSCCLGFVSLDQPSH*NQQVHP
Trigger: TGGATGGACCTGCTGATTCAAGTGACTTGGCTGATC...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 90 bp CTTATTGATGTCGCTGAACTGGACTACACCAATTTGCACCCGATCTaGTCCAATCTGAGACTTGCTCACCAGGTTTTTCATAAATGTTTT +
Preference number: 5 (lower is better)
Translates to: LIDVAELDYTNLHPI*SNLRLAHQVFHKCF
Trigger: AAAACATTTATGAAAAACCTGGTGAGCAAGTCTCAGATTGGACCAGATCGGGTGCAAATTGGTGTAGTCCAGTTCAGCGACATCAATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGCTGCTTTTGTCACGTaGTCTTCTGAATCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSAAFVT*SSESRW
Trigger: CCACCGAGATTCAGAAGACAACGTGACAAAAGCAGC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTTCCAAGATGCTATCCTaGGACATGCCATTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LVEIANLALSCCLGFVSLSKMLS*DMPFVR
Trigger: CCTGACAAATGGCATGTCCAAGGATAGCATCTTGGA...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAGAAGTACTTGTCGCTaGATCCTGCCATGGCTAACA +
Preference number: 5 (lower is better)
Translates to: LVEIANLALSCCLGFVSLRSTCR*ILPWLT
Trigger: TGTTAGCCATGGCAGGATCAAGCGACAAGTACTTCT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTCCACGAAGAAGTACTaGTCGCTTGATCCTGCCATG +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSSTKKY*SLDPAM
Trigger: CATGGCAGGATCAAGCGACAAGTACTTCTTCGTGGA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGATCAGCCAAGTCACTaGAATCAGCAGGTCCATCCA +
Preference number: 5 (lower is better)
Translates to: ITKLGKEDGFAENELDRDDQPSH*NQQVHP
Trigger: TGGATGGACCTGCTGATTCAAGTGACTTGGCTGATC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTAGATCCTCCAGTTCCTaGTCATCCCAAATAGGGCCA +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSRSSSS*SSQIGP
Trigger: TGGCCCTATTTGGGATGACAAGGAACTGGAGGATCT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TCTGTAGGTGGTAAGATTGAACTCAGCTCTAACTGGACTCTTCTGAGTGTTGGGTTTATTGGTGGATATTaGTTGATTGCACGCCTGATT +
Preference number: 5 (lower is better)
Translates to: SVGGKIELSSNWTLLSVGFIGGY*LIARLI
Trigger: AATCAGGCGTGCAATCAACAAATATCCACCAATAAA...CCCAACACTCAGAAGAGTCCAGTTAGAGCTGAGTTCAATCTTACCACCTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp TCTGTAGGTGGTAAGATTGAACTCAGCTCTAACTGGACTCTTCTGAGTGTTGGGTCTGCTAATCCTGTTTaGGTGCTGTTTATTATTGAC +
Preference number: 5 (lower is better)
Translates to: SVGGKIELSSNWTLLSVGSANPV*VLFIID
Trigger: GTCAATAATAAACAGCACCAAAACAGGATTAGCAGA...CCCAACACTCAGAAGAGTCCAGTTAGAGCTGAGTTCAATCTTACCACCTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS-3UTR CAA 90 bp ATGAAACAGTTCTTCGACATATCAGTCGTAGAGTGCTGGAATTGTCAGGAGTGGACATTGGGTGTTTCGTaGTTGAAAATATCAGCCCTA +
Preference number: 5 (lower is better)
Translates to: MKQFFDISVVECWNCQEWTLGVS*LKISAL
Trigger: TAGGGCTGATATTTTCAACAACGAAACACCCAATGT...CCACTCCTGACAATTCCAGCACTCTACGACTGATATGTCGAAGAACTGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTAAGAAGCATCCTGGCTaGTGTGATTCTTGGGTTAAA +
Preference number: 5 (lower is better)
Translates to: KITLFSSVQANNSHSGVFKKHPG*CDSWVK
Trigger: TTTAACCCAAGAATCACACAAGCCAGGATGCTTCTT...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 90 bp GGGGAGAAAGGTTCTGTATATGCTGGAGAACCTCTGACTTATTTATaGCCATGCTCAGTGAATTTATCACTTTTGTCTCATTGCTATAGG +
Preference number: 5 (lower is better)
Translates to: GEKGSVYAGEPLTYL*PCSVNLSLLSHCYR
Trigger: CCTATAGCAATGAGACAAAAGTGATAAATTCACTGAGCATGGGCATAAATAAGTCAGAGGTTCTCCAGCATATACAGAACCTTTCTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATTCCACACAACCAGATTaGAGCGTTTCAGTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: ITKLGKEDGFAENELDRDSTQPD*SVSVLS
Trigger: AGAGAGGACTGAAACGCTCAAATCTGGTTGTGTGGA...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAAATTACCCTCTTCTCATCAGTCCAAGCAAACAACTCCCACAGTGGTGTGTTTTTTGGTCTATTGCATTaGAAATGTCGCTTTGGGACA +
Preference number: 5 (lower is better)
Translates to: KITLFSSVQANNSHSGVFFGLLH*KCRFGT
Trigger: TGTCCCAAAGCGACATTTCAAATGCAATAGACCAAA...AAACACACCACTGTGGGAGTTGTTTGCTTGGACTGATGAGAAGAGGGTAATTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCCTATTCGCACTCTGTaGAGGCTGACATCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSPIRTL*RLTSKS
Trigger: AGACTTTGATGTCAGCCTCAACAGAGTGCGAATAGG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATTCTACTTTTGAAGAGTaGCAGACACTGGCTGTCACA +
Preference number: 5 (lower is better)
Translates to: ITKLGKEDGFAENELDRDSTFEE*QTLAVT
Trigger: TGTGACAGCCAGTGTCTGCAACTCTTCAAAAGTAGA...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCCTACAAACTGTTGCTaGAGTTCTGGCAGCAGATTT +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSPTNCC*SSGSRF
Trigger: AAATCTGCTGCCAGAACTCAAGCAACAGTTTGTAGG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTCATTGTCATGTTGCCTaGGCTTTGTTTCCCTTAATG +
Preference number: 5 (lower is better)
Translates to: LVEIANLALSCCLGFVSLHCHVA*ALFPLM
Trigger: CATTAAGGGAAACAAAGCCAAGGCAACATGACAATG...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 90 bp TCTGAAAATAAAAGGACCACCTTTCCTCGAGCAGCTGATTTATTCTaGAATGTATCCCATAGAGAATCCAAGAGGTTTGCATTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: SENKRTTFPRAADLF*NVSHRESKRFALRR
Trigger: TCTTCTCAATGCAAACCTCTTGGATTCTCTATGGGATACATTTCAGAATAAATCAGCTGCTCGAGGAAAGGTGGTCCTTTTATTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358511.10
ENST00000506143.5
ENST00000511332.1
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTCTGCTTCTTTGCTTTTaGCAACAGACTCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSLLLCF*QQTQCE
Trigger: TTCACACTGAGTCTGTTGCAAAAAGCAAAGAAGCAG...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTAATTTCTCTGAGAAGTaGACTCTTCTTGTAGGCGTC +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSNFSEK*TLLVGV
Trigger: GACGCCTACAAGAAGAGTCAACTTCTCAGAGAAATT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTATTGGTGGATATTTGTaGATTGCACGCCTGATTGAG +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSIGGYL*IARLIE
Trigger: CTCAATCAGGCGTGCAATCAACAAATATCCACCAAT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTATTGCAAATTTGGCATaGTCATGTTGCCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LVEIANLALSCCLGFVSLIANLA*SCCLGF
Trigger: AAAGCCAAGGCAACATGACAATGCCAAATTTGCAAT...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCCCAAATCCTGCTTGTaGGAGTATTTATTGATCTCA +
Preference number: 5 (lower is better)
Translates to: ITKLGKEDGFAENELDRDPKSCL*EYLLIS
Trigger: TGAGATCAATAAATACTCCAACAAGCAGGATTTGGG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp TTGGTAGAAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTTTTCCCAAATCCTGCTaGTTGGAGTATTTATTGATC +
Preference number: 5 (lower is better)
Translates to: LVEIANLALSCCLGFVSLFPKSC*LEYLLI
Trigger: GATCAATAAATACTCCAACAAGCAGGATTTGGGAAA...AAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTTCTACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTTTTCACAATCTACTTTaGAAGAGTTGCAGACACTGG +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSFHNLL*KSCRHW
Trigger: CCAGTGTCTGCAACTCTTCAAAAGTAGATTGTGAAA...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATCATCTCTGCCACTTCTaGCTACTCTTGAAAGATATT +
Preference number: 5 (lower is better)
Translates to: ITKLGKEDGFAENELDRDHLCHF*LLLKDI
Trigger: AATATCTTTCAAGAGTAGCAAGAAGTGGCAGAGATG...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358511.10
ENST00000506143.5
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTAAAAGGAACTTCTATTaGCAGCATGCTTTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSKRNFY*QHALEL
Trigger: GAGCTCTAAAGCATGCTGCAAATAGAAGTTCCTTTT...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 90 bp ACAACAGATGCCAGAAATTCCTTCATTTTCTTGAAGTCATTTGGCTaGATGCTAGTTGAACCATCCATAAGGAAAACAAGATCTACTTTG +
Preference number: 5 (lower is better)
Translates to: TTDARNSFIFLKSFG*MLVEPSIRKTRSTL
Trigger: CAAAGTAGATCTTGTTTTCCTTATGGATGGTTCAACTAGCATTCAGCCAAATGACTTCAAGAAAATGAAGGAATTTCTGGCATCTGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp AAATTGCAAATTTGGCATTGTCATGTTGCCTTGGCTTTGTTTCCCTTAATGTCTGTACTTAAAAATACATaGTCCAGAGTCCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: KLQIWHCHVALALFPLMSVLKNT*SRVHCK
Trigger: CTTACAGTGGACTCTGGACAATGTATTTTTAAGTAC...AGACATTAAGGGAAACAAAGCCAAGGCAACATGACAATGCCAAATTTGCAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS-3UTR CAA 90 bp ATTACTAAATTAGGAAAGGAGGATGGGTTTGCAGAAAATGAACTGGACAGAGATGTAGAAATTGCAAATTaGGCATTGTCATGTTGCCTT +
Preference number: 5 (lower is better)
Translates to: ITKLGKEDGFAENELDRDVEIAN*ALSCCL
Trigger: AAGGCAACATGACAATGCCAAATTTGCAATTTCTAC...ATCTCTGTCCAGTTCATTTTCTGCAAACCCATCCTCCTTTCCTAATTTAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp AGCCCGTGCACTTACGGGATCCCCTCGCAGGCCCTTTaGTCCACGGTCACCAGGAGTCCCTCTCTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: SPCTYGIPSQAL*STVTRSPSLPW
Trigger: CCAGGGAAGAGAGGGACTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGGGATCCCGTAAGTGCACGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS CCA 72 bp AGGGCTTCCGCGGCCTGGGCCACCTCGTCTTGGGACTaGCCATCTGTAAGGACCAGCAGCACCTGTGGGGTA +
Preference number: 6 (lower is better)
Translates to: RASAAWATSSWD*PSVRTSSTCGV
Trigger: TACCCCACAGGTGCTGCTGGTCCTTACAGATGGCCAGTCCCAAGACGAGGTGGCCCAGGCCGCGGAAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp CAACTCCAGGAGCTCCGGGATCCCCTCGCAGGCCCTTaGCTCCACGGTCACCAGGAGTCCCTCTCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: QLQELRDPLAGP*LHGHQESLSSL
Trigger: CAGGGAAGAGAGGGACTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGGGATCCCGGAGCTCCTGGAGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp CAGCCCGTGCACTTACGGGATCCCCTCGCAGGCCCTTaGCTCCACGGTCACCAGGAGTCCCTCTCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: QPVHLRDPLAGP*LHGHQESLSSL
Trigger: CAGGGAAGAGAGGGACTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGGGATCCCGTAAGTGCACGGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS CCA 72 bp GCACAAGGTGCCTGGCGTGGGAGTTATAGGAGAGGATaGCGATGTGCGCTCCCACGGGGCAGCTGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: AQGAWRGSYRRG*RCALPRGSCSP
Trigger: GGGAGAACAGCTGCCCCGTGGGAGCGCACATCGCCATCCTCTCCTATAACTCCCACGCCAGGCACCTTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp TCCAGTTTGCAGCCCGTGCACTTACGGGATCCCCTCGCAGGCCCTTaGCTCCACGGTCACCAGGAGTCCCTCTCTTCCCTGGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: SSLQPVHLRDPLAGP*LHGHQESLSSLGFP
Trigger: AGGGAAGCCCAGGGAAGAGAGGGACTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGGGATCCCGTAAGTGCACGGGCTGCAAACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS TCA 72 bp ATGTTGGGCCGGGCGCCCTTGGTGGGGCTGAAGTACTaGGACACAAAGCTCAGGGCACTACCAGTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: MLGRAPLVGLKY*DTKLRALPVRV
Trigger: CACCCTGACTGGTAGTGCCCTGAGCTTTGTGTCTCAGTACTTCAGCCCCACCAAGGGCGCCCGGCCCAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp CGGGAGTGGTCCAGGGCAAACACCAACTCGGTTGGGTaGACTGGGCATTCCGGTTTTCCATGCCTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: REWSRANTNSVG*TGHSGFPCLPG
Trigger: TCCTGGCAGGCATGGAAAACCGGAATGCCCAGTGCACCCAACCGAGTTGGTGTTTGCCCTGGACCACTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp GTGGTCCAGGGCAAACACCAACTCGGTTGGGTGCACTaGGCATTCCGGTTTTCCATGCCTGCCAGGACTGCG +
Preference number: 6 (lower is better)
Translates to: VVQGKHQLGWVH*AFRFSMPARTA
Trigger: CGCAGTCCTGGCAGGCATGGAAAACCGGAATGCCCAGTGCACCCAACCGAGTTGGTGTTTGCCCTGGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp ATCCCGGGAGTGGTCCAGGGCAAACACCAACTCGGTTaGGTGCACTGGGCATTCCGGTTTTCCATGCCTGCC +
Preference number: 6 (lower is better)
Translates to: IPGVVQGKHQLG*VHWAFRFSMPA
Trigger: GGCAGGCATGGAAAACCGGAATGCCCAGTGCACCCAACCGAGTTGGTGTTTGCCCTGGACCACTCCCGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp CATCCCGGGAGTGGTCCAGGGCAAACACCAACTCGGTaGGGTGCACTGGGCATTCCGGTTTTCCATGCCTGC +
Preference number: 6 (lower is better)
Translates to: HPGSGPGQTPTR*GALGIPVFHAC
Trigger: GCAGGCATGGAAAACCGGAATGCCCAGTGCACCCAACCGAGTTGGTGTTTGCCCTGGACCACTCCCGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 72 bp CAGGCGGCTGCCCCGGGCTTCAGTGAACATGTGGTCTaGGAAGCCCAGTGCCTCAGCAGTATAAGTACTGCC +
Preference number: 6 (lower is better)
Translates to: QAAAPGFSEHVV*EAQCLSSISTA
Trigger: GGCAGTACTTATACTGCTGAGGCACTGGGCTTCTCAGACCACATGTTCACTGAAGCCCGGGGCAGCCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp GATGGGAATCAAGCCCTAACTCCAGTTTGCAGCCCGTaGACTTACGGGATCCCCTCGCAGGCCCTTTGCTCC +
Preference number: 6 (lower is better)
Translates to: DGNQALTPVCSP*TYGIPSQALCS
Trigger: GGAGCAAAGGGCCTGCGAGGGGATCCCGTAAGTGCACGGGCTGCAAACTGGAGTTAGGGCTTGATTCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS CAA 90 bp GTGCCAGTGTCGTCAATCGCAAATGCGCGCCTGACCGAGGGCACGTaGCTGAAAGTGATCACCACGGGAATGATTTCAAGCGCGCCGAAC +
Preference number: 6 (lower is better)
Translates to: VPVSSIANARLTEGT*LKVITTGMISSAPN
Trigger: GTTCGGCGCGCTTGAAATCATTCCCGTGGTGATCACTTTCAGCAACGTGCCCTCGGTCAGGCGCGCATTTGCGATTGACGACACTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp TACTGCTCAGCAGGGTGGGATGCTATCTTTTCCAACTaGGTGTCGCTGGCGCCCTCTATGCCCAGGGTGAAG +
Preference number: 6 (lower is better)
Translates to: YCSAGWDAIFSN*VSLAPSMPRVK
Trigger: CTTCACCCTGGGCATAGAGGGCGCCAGCGACACCCAGTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp GGTGCCATAGCATCCCTTAGTACCTTGCTCTCCCACTaGTCCAGGGGCTCCTCTTTCTCCAGCGATTCCCTC +
Preference number: 6 (lower is better)
Translates to: GAIASLSTLLSH*SRGSSFSSDSL
Trigger: GAGGGAATCGCTGGAGAAAGAGGAGCCCCTGGACCAGTGGGAGAGCAAGGTACTAAGGGATGCTATGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358511.10
ENST00000506143.5
ENST00000511332.1
CDS CAA 72 bp CAGAAGTACGGATGGGAATCAAGCCCTAACTCCAGTTaGCAGCCCGTGCACTTACGGGATCCCCTCGCAGGC +
Preference number: 6 (lower is better)
Translates to: QKYGWESSPNSS*QPVHLRDPLAG
Trigger: GCCTGCGAGGGGATCCCGTAAGTGCACGGGCTGCAAACTGGAGTTAGGGCTTGATTCCCATCCGTACTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS CAA 90 bp ATGGTCACACCCTCCCGTCGGAGGTTAACAGCTGCTTTTGTCACGTaGTCTTCTGAATCTCGGTGGGTCACCAGCACGGCAATCTGGGGC +
Preference number: 6 (lower is better)
Translates to: MVTPSRRRLTAAFVT*SSESRWVTSTAIWG
Trigger: GCCCCAGATTGCCGTGCTGGTGACCCACCGAGATTCAGAAGACAACGTGACAAAAGCAGCTGTTAACCTCCGACGGGAGGGTGTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp ACTCCCTATCAGAAGTACGGATGGGAATCAAGCCCTAACTCCAGTTaGCAGCCCGTGCACTTACGGGATCCCCTCGCAGGCCCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: TPYQKYGWESSPNSS*QPVHLRDPLAGPLL
Trigger: GAGCAAAGGGCCTGCGAGGGGATCCCGTAAGTGCACGGGCTGCAAACTGGAGTTAGGGCTTGATTCCCATCCGTACTTCTGATAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS TCA 72 bp ATGGCAGCCGTGGTGATGGAGTGGGCATCCGCGGACTaGCCGCTGCTGAAAAATGTGGCGATTTTTCTCGTG +
Preference number: 6 (lower is better)
Translates to: MAAVVMEWASAD*PLLKNVAIFLV
Trigger: CACGAGAAAAATCGCCACATTTTTCAGCAGCGGTCAGTCCGCGGATGCCCACTCCATCACCACGGCTGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp CGCTTGATCCTGCCATGGCTAACAGCTCCACGGGATTaGCACCATCAATCCCCACAGCCAGGACAAGAATGC +
Preference number: 6 (lower is better)
Translates to: RLILPWLTAPRD*HHQSPQPGQEC
Trigger: GCATTCTTGTCCTGGCTGTGGGGATTGATGGTGCCAATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp ATCCGCTCAAATTCCTGCTCAGTGACATCCCGGGAGTaGTCCAGGGCAAACACCAACTCGGTTGGGTGCACT +
Preference number: 6 (lower is better)
Translates to: IRSNSCSVTSRE*SRANTNSVGCT
Trigger: AGTGCACCCAACCGAGTTGGTGTTTGCCCTGGACCACTCCCGGGATGTCACTGAGCAGGAATTTGAGCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp TCTTCTTGTAGGCGTCTGAGAAGCGCACAAGGTGCCTaGCGTGGGAGTTATAGGAGAGGATGGCGATGTGCG +
Preference number: 6 (lower is better)
Translates to: SSCRRLRSAQGA*RGSYRRGWRCA
Trigger: CGCACATCGCCATCCTCTCCTATAACTCCCACGCCAGGCACCTTGTGCGCTTCTCAGACGCCTACAAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp CCCTCCCGTCGGAGGTTAACAGCTGCTTTTGTCACGTaGTCTTCTGAATCTCGGTGGGTCACCAGCACGGCA +
Preference number: 6 (lower is better)
Translates to: PSRRRLTAAFVT*SSESRWVTSTA
Trigger: TGCCGTGCTGGTGACCCACCGAGATTCAGAAGACAACGTGACAAAAGCAGCTGTTAACCTCCGACGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp CTTCAGTTTGGAGACATACTGCTCAGCAGGGTGGGATaGTATCTTTTCCAACTGGGTGTCGCTGGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: LQFGDILLSRVG*YLFQLGVAGAL
Trigger: GAGGGCGCCAGCGACACCCAGTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTATGTCTCCAAACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp TTCCACGTTCTCCTTTCAAGCCTGTGGGTCCTTCTATaGTACTGTCAACTCCAGGAGCTCCGGGATCCCCTC +
Preference number: 6 (lower is better)
Translates to: FHVLLSSLWVLL*YCQLQELRDPL
Trigger: GAGGGGATCCCGGAGCTCCTGGAGTTGACAGTAGCATAGAAGGACCCACAGGCTTGAAAGGAGAACGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp TCGCTTGATCCTGCCATGGCTAACAGCTCCACGGGATaGGCACCATCAATCCCCACAGCCAGGACAAGAATG +
Preference number: 6 (lower is better)
Translates to: SLDPAMANSSTG*APSIPTARTRM
Trigger: CATTCTTGTCCTGGCTGTGGGGATTGATGGTGCCAATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp TCTGTTTCCCTTAGGACCTTTGGTGCCATAGCATCCCTTAGTACCTaGCTCTCCCACTGGTCCAGGGGCTCCTCTTTCTCCAGCGATTCC +
Preference number: 6 (lower is better)
Translates to: SVSLRTFGAIASLST*LSHWSRGSSFSSDS
Trigger: GGAATCGCTGGAGAAAGAGGAGCCCCTGGACCAGTGGGAGAGCAAGGTACTAAGGGATGCTATGGCACCAAAGGTCCTAAGGGAAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358511.10
ENST00000506143.5
ENST00000511332.1
CDS TCA 72 bp TCGGAGGTTAACAGCTGCTTTTGTCACGTTGTCTTCTaGATCTCGGTGGGTCACCAGCACGGCAATCTGGGG +
Preference number: 6 (lower is better)
Translates to: SEVNSCFCHVVF*ISVGHQHGNLG
Trigger: CCCCAGATTGCCGTGCTGGTGACCCACCGAGATTCAGAAGACAACGTGACAAAAGCAGCTGTTAACCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp GGTTGTGAGCAGCCAGGTCAGCGAAGGTCTTCAGTTTaGAGACATACTGCTCAGCAGGGTGGGATGCTATCT +
Preference number: 6 (lower is better)
Translates to: GCEQPGQRRSSV*RHTAQQGGMLS
Trigger: AGATAGCATCCCACCCTGCTGAGCAGTATGTCTCCAAACTGAAGACCTTCGCTGACCTGGCTGCTCACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp ATCCCTACCACCTCTGACAGGAACGTCTTCATTTCATaGAAATCTGTGGCCTGGGTGCTCCCTGAGCCATCG +
Preference number: 6 (lower is better)
Translates to: IPTTSDRNVFIS*KSVAWVLPEPS
Trigger: CGATGGCTCAGGGAGCACCCAGGCCACAGATTTCCATGAAATGAAGACGTTCCTGTCAGAGGTGGTAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp CTGTGGGGTACCTGTATTTATCCTGCTGCCCATGTCTaGCCTGAAGTAATGTTCCACCTCCCTGAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LWGTCIYPAAHV*PEVMFHLPECS
Trigger: GCTGCACTCAGGGAGGTGGAACATTACTTCAGGCCAGACATGGGCAGCAGGATAAATACAGGTACCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp GCACCATCAATCCCCACAGCCAGGACAAGAATGCCTTaGTCCCGCAAGGCCTTTGCCGTGGCATTGAGTTTA +
Preference number: 6 (lower is better)
Translates to: APSIPTARTRMP*SRKAFAVALSL
Trigger: TAAACTCAATGCCACGGCAAAGGCCTTGCGGGACAAAGGCATTCTTGTCCTGGCTGTGGGGATTGATGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp TCGTCAATCGCAAATGCGCGCCTGACCGAGGGCACGTaGCTGAAAGTGATCACCACGGGAATGATTTCAAGC +
Preference number: 6 (lower is better)
Translates to: SSIANARLTEGT*LKVITTGMISS
Trigger: GCTTGAAATCATTCCCGTGGTGATCACTTTCAGCAACGTGCCCTCGGTCAGGCGCGCATTTGCGATTGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp ACGGGATTGGCACCATCAATCCCCACAGCCAGGACAAGAATGCCTTaGTCCCGCAAGGCCTTTGCCGTGGCATTGAGTTTATCAGCATCA +
Preference number: 6 (lower is better)
Translates to: TGLAPSIPTARTRMP*SRKAFAVALSLSAS
Trigger: TGATGCTGATAAACTCAATGCCACGGCAAAGGCCTTGCGGGACAAAGGCATTCTTGTCCTGGCTGTGGGGATTGATGGTGCCAATCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp AAGTACTTGTCGCTTGATCCTGCCATGGCTAACAGCTCCACGGGATaGGCACCATCAATCCCCACAGCCAGGACAAGAATGCCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: KYLSLDPAMANSSTG*APSIPTARTRMPLS
Trigger: GGACAAAGGCATTCTTGTCCTGGCTGTGGGGATTGATGGTGCCAATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCGACAAGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 72 bp TTGATCTCAAATTCCAAGTCCCAGCTGTCAGCATACTaGACGGCCCCAACCCGCACCTTATGGGGAGCAATG +
Preference number: 6 (lower is better)
Translates to: LISNSKSQLSAY*TAPTRTLWGAM
Trigger: CATTGCTCCCCATAAGGTGCGGGTTGGGGCCGTTCAGTATGCTGACAGCTGGGACTTGGAATTTGAGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp GCCAGGTCAGCGAAGGTCTTCAGTTTGGAGACATACTaGTCAGCAGGGTGGGATGCTATCTTTTCCAACTGG +
Preference number: 6 (lower is better)
Translates to: ARSAKVFSLETY*SAGWDAIFSNW
Trigger: CCAGTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTATGTCTCCAAACTGAAGACCTTCGCTGACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp GGTCTGAGAAGCCCAGTGCCTCAGCAGTATAAGTACTaGCACCCATGGCTTGGTCATTCTGGAGCACTGAAA +
Preference number: 6 (lower is better)
Translates to: GLRSPVPQQYKY*HPWLGHSGALK
Trigger: TTTCAGTGCTCCAGAATGACCAAGCCATGGGTGGCAGTACTTATACTGCTGAGGCACTGGGCTTCTCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp CGTCCGCTTGAAGACATTCCTGGAAATAAACCGCATTaGTCTGCCAATCTCCCTGCTGGCAGAGGATCTCTC +
Preference number: 6 (lower is better)
Translates to: RPLEDIPGNKPH*SANLPAGRGSL
Trigger: GAGAGATCCTCTGCCAGCAGGGAGATTGGCAGAGCAATGCGGTTTATTTCCAGGAATGTCTTCAAGCGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp AAGGTCTTCAGTTTGGAGACATACTGCTCAGCAGGGTaGGATGCTATCTTTTCCAACTGGGTGTCGCTGGCG +
Preference number: 6 (lower is better)
Translates to: KVFSLETYCSAG*DAIFSNWVSLA
Trigger: CGCCAGCGACACCCAGTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTATGTCTCCAAACTGAAGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp TCTCCACGAAGAAGTACTTGTCGCTTGATCCTGCCATaGCTAACAGCTCCACGGGATTGGCACCATCAATCC +
Preference number: 6 (lower is better)
Translates to: SPRRSTCRLILP*LTAPRDWHHQS
Trigger: GGATTGATGGTGCCAATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCGACAAGTACTTCTTCGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp GACCTCCAAAAGTCTCCACGAAGAAGTACTTGTCGCTaGATCCTGCCATGGCTAACAGCTCCACGGGATTGG +
Preference number: 6 (lower is better)
Translates to: DLQKSPRRSTCR*ILPWLTAPRDW
Trigger: CCAATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCGACAAGTACTTCTTCGTGGAGACTTTTGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp CCCTTCAGACCTCCAAAAGTCTCCACGAAGAAGTACTaGTCGCTTGATCCTGCCATGGCTAACAGCTCCACG +
Preference number: 6 (lower is better)
Translates to: PFRPPKVSTKKY*SLDPAMANSST
Trigger: CGTGGAGCTGTTAGCCATGGCAGGATCAAGCGACAAGTACTTCTTCGTGGAGACTTTTGGAGGTCTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp GCGATTTTTCTCGTGTGTGCCCCCGGAAGCGTCCGCTaGAAGACATTCCTGGAAATAAACCGCATTGCTCTG +
Preference number: 6 (lower is better)
Translates to: AIFLVCAPGSVR*KTFLEINRIAL
Trigger: CAGAGCAATGCGGTTTATTTCCAGGAATGTCTTCAAGCGGACGCTTCCGGGGGCACACACGAGAAAAATCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp TTCCCTTCAGACCTCCAAAAGTCTCCACGAAGAAGTACTTGTCGCTaGATCCTGCCATGGCTAACAGCTCCACGGGATTGGCACCATCAA +
Preference number: 6 (lower is better)
Translates to: FPSDLQKSPRRSTCR*ILPWLTAPRDWHHQ
Trigger: TTGATGGTGCCAATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCGACAAGTACTTCTTCGTGGAGACTTTTGGAGGTCTGAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp AGCCAGGACAAGAATGCCTTTGTCCCGCAAGGCCTTTaGCGTGGCATTGAGTTTATCAGCATCATGGGATTC +
Preference number: 6 (lower is better)
Translates to: SQDKNAFVPQGL*RGIEFISIMGF
Trigger: GAATCCCATGATGCTGATAAACTCAATGCCACGGCAAAGGCCTTGCGGGACAAAGGCATTCTTGTCCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp TCCCTTGAAATCGAGACTCCCTATCAGAAGTACGGATaGGAATCAAGCCCTAACTCCAGTTTGCAGCCCGTG +
Preference number: 6 (lower is better)
Translates to: SLEIETPYQKYG*ESSPNSSLQPV
Trigger: CACGGGCTGCAAACTGGAGTTAGGGCTTGATTCCCATCCGTACTTCTGATAGGGAGTCTCGATTTCAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506143.5
CDS TCA 72 bp CTTCATTTCATGGAAATCTGTGGCCTGGGTGCTCCCTaGGCCATCGATAAGCAGATAGATGTCTGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LHFMEICGLGAP*AIDKQIDVCFL
Trigger: GAGGAAGCAGACATCTATCTGCTTATCGATGGCTCAGGGAGCACCCAGGCCACAGATTTCCATGAAATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 72 bp TTTCCATGCCTGCCAGGACTGCGGTCTCGCACATACTaGATGAGCTCACATGTAGAAAATGAAGCCAAGCCT +
Preference number: 6 (lower is better)
Translates to: FPCLPGLRSRTY*MSSHVENEAKP
Trigger: AGGCTTGGCTTCATTTTCTACATGTGAGCTCATTCAGTATGTGCGAGACCGCAGTCCTGGCAGGCATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp TTCAGTGCTGCGCCTGTGTTTGTATTCCCACCCATCTaGCTGATATTCTCAATGGCCTTTCCCAAATCCTGC +
Preference number: 6 (lower is better)
Translates to: FSAAPVFVFPPI*LIFSMAFPKSC
Trigger: GCAGGATTTGGGAAAGGCCATTGAGAATATCAGGCAGATGGGTGGGAATACAAACACAGGCGCAGCACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp CATGTCTGGCCTGAAGTAATGTTCCACCTCCCTGAGTaGAGCACCGATGTGTGTGTTTCCAAAGATCTGCTT +
Preference number: 6 (lower is better)
Translates to: HVWPEVMFHLPE*STDVCVSKDLL
Trigger: AAGCAGATCTTTGGAAACACACACATCGGTGCTGCACTCAGGGAGGTGGAACATTACTTCAGGCCAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp CTCTCAGTCTGTTTGCAGGCTCCAAGATGCTATCCTTaGACATGCCATTTGTCAGGACAACAAGGTGGCATG +
Preference number: 6 (lower is better)
Translates to: LSVCLQAPRCYP*TCHLSGQQGGM
Trigger: CATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp TCAGTCTGTTTGCAGGCTCCAAGATGCTATCCTTGGACATGCCATTaGTCAGGACAACAAGGTGGCATGGAACTTTGTTTCCTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: SVCLQAPRCYPWTCH*SGQQGGMELCFLAA
Trigger: AGCAGCGAGGAAACAAAGTTCCATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp GAAAATATTCCCTTCAGACCTCCAAAAGTCTCCACGAAGAAGTACTaGTCGCTTGATCCTGCCATGGCTAACAGCTCCACGGGATTGGCA +
Preference number: 6 (lower is better)
Translates to: ENIPFRPPKVSTKKY*SLDPAMANSSTGLA
Trigger: TGCCAATCCCGTGGAGCTGTTAGCCATGGCAGGATCAAGCGACAAGTACTTCTTCGTGGAGACTTTTGGAGGTCTGAAGGGAATATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 72 bp AGTACTGCCACCCATGGCTTGGTCATTCTGGAGCACTaGAATTACCTCCAGTTTTGTGCCAAAGTCATCCAG +
Preference number: 6 (lower is better)
Translates to: STATHGLVILEH*NYLQFCAKVIQ
Trigger: CTGGATGACTTTGGCACAAAACTGGAGGTAATTTCAGTGCTCCAGAATGACCAAGCCATGGGTGGCAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 72 bp AATTTCTCTGAGAAGTTGACTCTTCTTGTAGGCGTCTaGGAAGCGCACAAGGTGCCTGGCGTGGGAGTTATA +
Preference number: 6 (lower is better)
Translates to: NFSEKLTLLVGV*EAHKVPGVGVI
Trigger: TATAACTCCCACGCCAGGCACCTTGTGCGCTTCTCAGACGCCTACAAGAAGAGTCAACTTCTCAGAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp GTCTGTTTGCAGGCTCCAAGATGCTATCCTTGGACATaGCATTTGTCAGGACAACAAGGTGGCATGGAACTT +
Preference number: 6 (lower is better)
Translates to: VCLQAPRCYPWT*HLSGQQGGMEL
Trigger: AAGTTCCATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp GCCTTCCCAGTTCGGGGAGAAAGGTTCTGTATATGCTaGAGAACCTCTGACTTATTTATGCCCATGCTCAGT +
Preference number: 6 (lower is better)
Translates to: AFPVRGERFCIC*RTSDLFMPMLS
Trigger: ACTGAGCATGGGCATAAATAAGTCAGAGGTTCTCCAGCATATACAGAACCTTTCTCCCCGAACTGGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp GTCGCTGAACTGGACTACACCAATTTGCACCCGATCTaGTCCAATCTGAGACTTGCTCACCAGGTTTTTCAT +
Preference number: 6 (lower is better)
Translates to: VAELDYTNLHPI*SNLRLAHQVFH
Trigger: ATGAAAAACCTGGTGAGCAAGTCTCAGATTGGACCAGATCGGGTGCAAATTGGTGTAGTCCAGTTCAGCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp TCTCTCAGTCTGTTTGCAGGCTCCAAGATGCTATCCTaGGACATGCCATTTGTCAGGACAACAAGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: SLSLFAGSKMLS*DMPFVRTTRWH
Trigger: ATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp GCTGACCTTCAAGCAAAGTCTGCCCTTTCTCCTGAGTaGAGACATCAAATCCCACCACAACATCCACGAAAC +
Preference number: 6 (lower is better)
Translates to: ADLQAKSALSPE*RHQIPPQHPRN
Trigger: GTTTCGTGGATGTTGTGGTGGGATTTGATGTCTCAACTCAGGAGAAAGGGCAGACTTTGCTTGAAGGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp ATGTGCTCTTCTCTCAGTCTGTTTGCAGGCTCCAAGATGCTATCCTaGGACATGCCATTTGTCAGGACAACAAGGTGGCATGGAACTTTG +
Preference number: 6 (lower is better)
Translates to: MCSSLSLFAGSKMLS*DMPFVRTTRWHGTL
Trigger: CAAAGTTCCATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTGAGAGAAGAGCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp CCATCCAAGGCTGACCTTCAAGCAAAGTCTGCCCTTTCTCCTGAGTaGAGACATCAAATCCCACCACAACATCCACGAAACAGTTGCTTT +
Preference number: 6 (lower is better)
Translates to: PSKADLQAKSALSPE*RHQIPPQHPRNSCF
Trigger: AAAGCAACTGTTTCGTGGATGTTGTGGTGGGATTTGATGTCTCAACTCAGGAGAAAGGGCAGACTTTGCTTGAAGGTCAGCCTTGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp GACATTGGAGCCAAACACTCCCACAGAATAGATGATTACACCTTCTaGCCGAAGCACTACTGCTGGTTCCTTTACTATGTCCTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: DIGAKHSHRIDDYTF*PKHYCWFLYYVLSF
Trigger: GAAGCTCAGGACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCAAGAAGGTGTAATCATCTATTCTGTGGGAGTGTTTGGCTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 72 bp TGCCGAAGCACTACTGCTGGTTCCTTTACTATGTCCTaGGCTTCACCATCCGTGATGAGGATGAGAAACTTT +
Preference number: 6 (lower is better)
Translates to: CRSTTAGSFTMS*ASPSVMRMRNF
Trigger: AAAGTTTCTCATCCTCATCACGGATGGTGAAGCTCAGGACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp AGCATAAACTCGGATGTGCTCTTCTCTCAGTCTGTTTaGAGGCTCCAAGATGCTATCCTTGGACATGCCATT +
Preference number: 6 (lower is better)
Translates to: SINSDVLFSQSV*RLQDAILGHAI
Trigger: AATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTGAGAGAAGAGCACATCCGAGTTTATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp TTGCAGGCTCCAAGATGCTATCCTTGGACATGCCATTaGTCAGGACAACAAGGTGGCATGGAACTTTGTTTC +
Preference number: 6 (lower is better)
Translates to: LQAPRCYPWTCH*SGQQGGMELCF
Trigger: GAAACAAAGTTCCATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp TTCCTTATTGATGTCGCTGAACTGGACTACACCAATTaGCACCCGATCTGGTCCAATCTGAGACTTGCTCAC +
Preference number: 6 (lower is better)
Translates to: FLIDVAELDYTN*HPIWSNLRLAH
Trigger: GTGAGCAAGTCTCAGATTGGACCAGATCGGGTGCAAATTGGTGTAGTCCAGTTCAGCGACATCAATAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp CCCGCTGTGGTACAGATGTTGCGAACGATCCTTTTATaGACCTTCTTCAGTTCATCGAAGTTGTGCACTGTC +
Preference number: 6 (lower is better)
Translates to: PAVVQMLRTILL*TFFSSSKLCTV
Trigger: GACAGTGCACAACTTCGATGAACTGAAGAAGGTCAATAAAAGGATCGTTCGCAACATCTGTACCACAGCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp CTTGGACATGCCATTTGTCAGGACAACAAGGTGGCATaGAACTTTGTTTCCTCGCTGCTTCTTTGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: LGHAICQDNKVA*NFVSSLLLCFL
Trigger: CAAAAAGCAAAGAAGCAGCGAGGAAACAAAGTTCCATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp ATAGATGATTACACCTTCTTGCCGAAGCACTACTGCTaGTTCCTTTACTATGTCCTGAGCTTCACCATCCGT +
Preference number: 6 (lower is better)
Translates to: IDDYTFLPKHYC*FLYYVLSFTIR
Trigger: ACGGATGGTGAAGCTCAGGACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCAAGAAGGTGTAATCATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp GCCAAACACTCCCACAGAATAGATGATTACACCTTCTaGCCGAAGCACTACTGCTGGTTCCTTTACTATGTC +
Preference number: 6 (lower is better)
Translates to: AKHSHRIDDYTF*PKHYCWFLYYV
Trigger: GACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCAAGAAGGTGTAATCATCTATTCTGTGGGAGTGTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp CCCATCTGCCTGATATTCTCAATGGCCTTTCCCAAATCCTGCTTGTaGGAGTATTTATTGATCTCAAATTCCAAGTCCCAGCTGTCAGCA +
Preference number: 6 (lower is better)
Translates to: PICLIFSMAFPKSCL*EYLLISNSKSQLSA
Trigger: TGCTGACAGCTGGGACTTGGAATTTGAGATCAATAAATACTCCAACAAGCAGGATTTGGGAAAGGCCATTGAGAATATCAGGCAGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp CCACCCATCTGCCTGATATTCTCAATGGCCTTTCCCAAATCCTGCTaGTTGGAGTATTTATTGATCTCAAATTCCAAGTCCCAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: PPICLIFSMAFPKSC*LEYLLISNSKSQLS
Trigger: TGACAGCTGGGACTTGGAATTTGAGATCAATAAATACTCCAACAAGCAGGATTTGGGAAAGGCCATTGAGAATATCAGGCAGATGGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp ACAACATCCACGAAACAGTTGCTTTCACCCGCTGTGGTACAGATGTaGCGAACGATCCTTTTATTGACCTTCTTCAGTTCATCGAAGTTG +
Preference number: 6 (lower is better)
Translates to: TTSTKQLLSPAVVQM*RTILLLTFFSSSKL
Trigger: CAACTTCGATGAACTGAAGAAGGTCAATAAAAGGATCGTTCGCAACATCTGTACCACAGCGGGTGAAAGCAACTGTTTCGTGGATGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp AGAATAGATGATTACACCTTCTTGCCGAAGCACTACTaGTGGTTCCTTTACTATGTCCTGAGCTTCACCATC +
Preference number: 6 (lower is better)
Translates to: RIDDYTFLPKHY*WFLYYVLSFTI
Trigger: GATGGTGAAGCTCAGGACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCAAGAAGGTGTAATCATCTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp ATGCCATTTGTCAGGACAACAAGGTGGCATGGAACTTaGTTTCCTCGCTGCTTCTTTGCTTTTTGCAACAGA +
Preference number: 6 (lower is better)
Translates to: MPFVRTTRWHGT*FPRCFFAFCNR
Trigger: TCTGTTGCAAAAAGCAAAGAAGCAGCGAGGAAACAAAGTTCCATGCCACCTTGTTGTCCTGACAAATGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 72 bp TGGACTACACCAATTTGCACCCGATCTGGTCCAATCTaGGACTTGCTCACCAGGTTTTTCATAAATGTTTTC +
Preference number: 6 (lower is better)
Translates to: WTTPICTRSGPI*DLLTRFFINVF
Trigger: GAAAACATTTATGAAAAACCTGGTGAGCAAGTCTCAGATTGGACCAGATCGGGTGCAAATTGGTGTAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp TTGTCTCATTGCTATAGGCCACAAGGCCAACCCTCATaGAATTTTCCTTTATGTCAAGGGCAGATACACTTT +
Preference number: 6 (lower is better)
Translates to: LSHCYRPQGQPS*NFPLCQGQIHF
Trigger: AAAGTGTATCTGCCCTTGACATAAAGGAAAATTGCATGAGGGTTGGCCTTGTGGCCTATAGCAATGAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 90 bp GAACCTCTGACTTATTTATGCCCATGCTCAGTGAATTTATCACTTTaGTCTCATTGCTATAGGCCACAAGGCCAACCCTCATGCAATTTT +
Preference number: 6 (lower is better)
Translates to: EPLTYLCPCSVNLSL*SHCYRPQGQPSCNF
Trigger: AAAATTGCATGAGGGTTGGCCTTGTGGCCTATAGCAATGAGACAAAAGTGATAAATTCACTGAGCATGGGCATAAATAAGTCAGAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CCA 72 bp CAATTTCACAATCTACTTTTGAAGAGTTGCAGACACTaGCTGTCACATCTGAAAATATTCCCTTCAGACCTC +
Preference number: 6 (lower is better)
Translates to: QFHNLLLKSCRH*LSHLKIFPSDL
Trigger: GAGGTCTGAAGGGAATATTTTCAGATGTGACAGCCAGTGTCTGCAACTCTTCAAAAGTAGATTGTGAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp TGCCTGATATTCTCAATGGCCTTTCCCAAATCCTGCTaGTTGGAGTATTTATTGATCTCAAATTCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: CLIFSMAFPKSC*LEYLLISNSKS
Trigger: GGACTTGGAATTTGAGATCAATAAATACTCCAACAAGCAGGATTTGGGAAAGGCCATTGAGAATATCAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS TCA 72 bp TATACTCATCATAGTCAATACTGCCAGAGCTATCAATaGCAAACACAACGTCTAAAACTTCAATCCGCTTGC +
Preference number: 6 (lower is better)
Translates to: YTHHSQYCQSYQ*QTQRLKLQSAC
Trigger: GCAAGCGGATTGAAGTTTTAGACGTTGTGTTTGTCATTGATAGCTCTGGCAGTATTGACTATGATGAGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp GGTTCTGTATATGCTGGAGAACCTCTGACTTATTTATaGCCATGCTCAGTGAATTTATCACTTTTGTCTCAT +
Preference number: 6 (lower is better)
Translates to: GSVYAGEPLTYL*PCSVNLSLLSH
Trigger: ATGAGACAAAAGTGATAAATTCACTGAGCATGGGCATAAATAAGTCAGAGGTTCTCCAGCATATACAGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS GCA 72 bp GTATATGCTGGAGAACCTCTGACTTATTTATGCCCATaGTCAGTGAATTTATCACTTTTGTCTCATTGCTAT +
Preference number: 6 (lower is better)
Translates to: VYAGEPLTYLCP*SVNLSLLSHCY
Trigger: ATAGCAATGAGACAAAAGTGATAAATTCACTGAGCATGGGCATAAATAAGTCAGAGGTTCTCCAGCATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358511.10
CDS CAA 72 bp TTTCATCTCTTTGCAAGCTTCTTCAGTACAGATTTCTaGAACAACTTGGTTTCTTATGTCTTTCAATGCATC +
Preference number: 6 (lower is better)
Translates to: FHLFASFFSTDF*NNLVSYVFQCI
Trigger: GATGCATTGAAAGACATAAGAAACCAAGTTGTTCAAGAAATCTGTACTGAAGAAGCTTGCAAAGAGATGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358511.10