RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL6A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000172752

Ensembl transcript IDs: ENST00000265379.10, ENST00000312481.11, ENST00000373157.8, ENST00000512482.1, ENST00000512836.5

Found 766 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGACAATCACTGCTAGATGAAATGTTAGGGTCACCCCAGAACCGATaGCATGGGCATGGCTTTCCAGTTTTAAGAATTAGTAGAAGATAT +
Preference number: 1 (lower is better)
Translates to: RQSLLDEMLGSPQNR*HGHGFPVLRISRRY
Trigger: ATATCTTCTACTAATTCTTAAAACTGGAAAGCCATGCCCATGTCATCGGTTCTGGGGTGACCCTAACATTTCATCTAGCAGTGATTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATGGGTCATAGCAGCCTaGCAGGTGGGTTTTAGAAGA +
Preference number: 2 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKWVIAA*QVGFRR
Trigger: TCTTCTAAAACCCACCTGTCAGGCTGCTATGACCCA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTGGTTAGAACCACATaGGATTATACATGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVLVRTT*DYTCQW
Trigger: CCACTGACATGTATAATCCCATGTGGTTCTAACCAG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGATTATACATGTCAGTaGAGCTATCTTCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKDYTCQ*SYLLFS
Trigger: GGAGAAAAGAAGATAGCTCCACTGACATGTATAATC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTCAGGGAGCAGGGCTaGCCAAATATAACTAACCCA +
Preference number: 2 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKFREQG*PNITNP
Trigger: TGGGTTAGTTATATTTGGCCAGCCCTGCTCCCTGAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
3UTR-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGATTATACATGTCAGTaGAGCTATCTTCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVDYTCQ*SYLLFS
Trigger: GGAGAAAAGAAGATAGCTCCACTGACATGTATAATC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGTCAGGTCTTCTTACTaGTGTCTTCACTCCGAAAAT +
Preference number: 2 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNVRSSY*CLHSEN
Trigger: ATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGAC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCTGGTTAGAACCACATaGGATTATACATGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLVRTT*DYTCQW
Trigger: CCACTGACATGTATAATCCCATGTGGTTCTAACCAG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCATACATCATCAAAATTaGTGCCTGAACTGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESIHHQN*CLNCAE
Trigger: CTCTGCACAGTTCAGGCATCAATTTTGATGATGTAT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR TCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGCAAGCTGATATTTTCTaGAGAGACTCAGATTGGCTT +
Preference number: 2 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKQADIF*RDSDWL
Trigger: AAGCCAATCTGAGTCTCTTCAGAAAATATCAGCTTG...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512482.1
3UTR-3UTR GCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTTGATGCCTGAACTGTaGAGAGCTTTCAAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLMPEL*RAFKEK
Trigger: CTTTTCTTTGAAAGCTCTGCACAGTTCAGGCATCAA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGATTATACATGTCAGTaGAGCTATCTTCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESDYTCQ*SYLLFS
Trigger: GGAGAAAAGAAGATAGCTCCACTGACATGTATAATC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGAAATCATTCCTGGTTaGTCAGGTCTTCTTACTGAT +
Preference number: 3 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVEIIPG*SGLLTD
Trigger: ATCAGTAAGAAGACCTGACAAACCAGGAATGATTTC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR TCA 72 bp AAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATaGTTATACATTCTGGTTAGAACCACATGGGATTAT +
Preference number: 3 (lower is better)
Translates to: KVPVIYHSTSNR*LYILVRTTWDY
Trigger: ATAATCCCATGTGGTTCTAACCAGAATGTATAATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
3UTR-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTCTCCTATGATGACCTaGTATCTTCACCATGTTCTA +
Preference number: 3 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSPMMT*YLHHVL
Trigger: TAGAACATGGTGAAGATACAAGGTCATCATAGGAGA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
3UTR-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTCTCCTATGATGACCTaGTATCTTCACCATGTTCTA +
Preference number: 3 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNSPMMT*YLHHVL
Trigger: TAGAACATGGTGAAGATACAAGGTCATCATAGGAGA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTCCGCGCCGCACAGCTaGAGGTGGATTCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKSAPHS*RWIPAA
Trigger: CGCTGCGGGAATCCACCTGCAGCTGTGCGGCGCGGA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCGCCCGCGGCGCAGTTaGATAGAGCGCGCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVRPRRS*IERAPE
Trigger: TTCCGGCGCGCGCTCTATCCAACTGCGCCGCGGGCG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCTTTTAAGCCGGCGCTaGCCCGTGCCCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQLLSRR*PVPLAW
Trigger: CCAGGCCAAGGGCACGGGTCAGCGCCGGCTTAAAAG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCGCCCGCGGCGCAGTTaGATAGAGCGCGCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLRPRRS*IERAPE
Trigger: TTCCGGCGCGCGCTCTATCCAACTGCGCCGCGGGCG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGAGCCCAGGAGAACCCTaGGGTCCTTTCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRSPGEP*GPFCPW
Trigger: CCAGGGGCAGAAAGGACCTCAGGGTTCTCCTGGGCT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTCACCTGTGCCTCTGTaGCAGCCCCACAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKSPVPL*QPHSSP
Trigger: GGGTGAGCTGTGGGGCTGGCACAGAGGCACAGGTGA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCCCGTGCCCTTGGCCTaGCTCTTCCCTGGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKPVPLA*LFPGAF
Trigger: AAAAGCCCCAGGGAAGAGCCAGGCCAAGGGCACGGG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCCGCACAGCTGCAGGTaGATTCCCGCAGCGAACGCC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVPHSCR*IPAANA
Trigger: GGCGTTCGCTGCGGGAATCCACCTGCAGCTGTGCGG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGGCACCTCTGGAACCTaGGCTGCCCTGAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKGTSGT*AALRSW
Trigger: CCAGGATCTCAGGGCAGCCCAGGTTCCAGAGGTGCC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCCTTTGAGTCCCTTCTaGCCCCACGCCCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRPLSPF*PHAPGH
Trigger: ATGTCCAGGGGCGTGGGGTCAGAAGGGACTCAAAGG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGCCGGCGCTGACCCGTaGCCTTGGCCTGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKAGADP*PWPGSS
Trigger: GGAAGAGCCAGGCCAAGGGCACGGGTCAGCGCCGGC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGGACACTCCGGACCCTaGAAACCGCCCCCAACTCTC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVGHSGP*KPPPTL
Trigger: GAGAGTTGGGGGCGGTTTCCAGGGTCCGGAGTGTCC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGATTCCAGCTGGGGGTaGCCCTGGAACAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKDSSWG*PWNKGC
Trigger: GCAGCCTTTGTTCCAGGGCCACCCCCAGCTGGAATC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTCCTCCGGTCCCAAGTaGCTCATCCACCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQSSGPK*LIHQEH
Trigger: GTGTTCCTGGTGGATGAGTCACTTGGGACCGGAGGA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGGCTGCCCCTGCACATaGGTGGAGATGTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRGCPCT*VEMSNP
Trigger: TGGGTTTGACATCTCCACTCATGTGCAGGGGCAGCC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGGCTGCCCCTGCACATaGGTGGAGATGTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKGCPCT*VEMSNP
Trigger: TGGGTTTGACATCTCCACTCATGTGCAGGGGCAGCC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGAGTCCTCGGGTCCCATaGGGTCCTGGAATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKSPRVP*GPGIPG
Trigger: TCCAGGAATTCCAGGACCTCATGGGACCCGAGGACT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGATCGGTGGTGGGTACTaGTTGAATCCCCGCCTGACC +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRIGGGY*LNPRLT
Trigger: GGTCAGGCGGGGATTCAATCAGTACCCACCACCGAT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTCCGCGCCGCACAGCTaGAGGTGGATTCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSAPHS*RWIPAA
Trigger: CGCTGCGGGAATCCACCTGCAGCTGTGCGGCGCGGA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCTCCAGAAGAGGCTaGACCGAGCTCCTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVLSRRG*TELLSA
Trigger: TGCGCTCAGGAGCTCGGTGCAGCCTCTTCTGGAGAG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCTCTGGAACCTGGGCTaGCCTGAGATCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLWNLG*PEILDH
Trigger: GTGATCCAGGATCTCAGGGCAGCCCAGGTTCCAGAG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCTCTGGAACCTGGGCTaGCCTGAGATCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRLWNLG*PEILDH
Trigger: GTGATCCAGGATCTCAGGGCAGCCCAGGTTCCAGAG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCCCGTGCCCTTGGCCTaGCTCTTCCCTGGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLPVPLA*LFPGAF
Trigger: AAAAGCCCCAGGGAAGAGCCAGGCCAAGGGCACGGG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGCTGACCCGTGCCCTTaGCCTGGCTCTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESADPCP*PGSSLG
Trigger: CCCCAGGGAAGAGCCAGGCCAAGGGCACGGGTCAGC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGCTGACCCGTGCCCTTaGCCTGGCTCTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDADPCP*PGSSLG
Trigger: CCCCAGGGAAGAGCCAGGCCAAGGGCACGGGTCAGC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCTGACCCCACGCCCCTaGACATCCTGCAATCCCTTT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLTPRP*TSCNPF
Trigger: AAAGGGATTGCAGGATGTCCAGGGGCGTGGGGTCAG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGCCCAGGGGCACCTCTaGAACCTGGGCTGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNAQGHL*NLGCPE
Trigger: CTCAGGGCAGCCCAGGTTCCAGAGGTGCCCCTGGGC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGCCCAGGGGCACCTCTaGAACCTGGGCTGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLAQGHL*NLGCPE
Trigger: CTCAGGGCAGCCCAGGTTCCAGAGGTGCCCCTGGGC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAACTTTTAAGCCGGCGCTaGCCCGTGCCCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKLLSRR*PVPLAW
Trigger: CCAGGCCAAGGGCACGGGTCAGCGCCGGCTTAAAAG...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGATTTCCTGGTTCTCCTaGGACACCTCGGAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRISWFS*DTSESP
Trigger: AGGGGACTCCGAGGTGTCTCAGGAGAACCAGGAAAT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGAGTCAGACCAGCGGATaGGATAGCTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRSQTSG*DSWCLS
Trigger: ACTCAGGCACCAGCTATCTCATCCGCTGGTCTGACT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCTGCATACGTCCGCTTaGACACGTTGCGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRLHTSA*TRCGSQ
Trigger: TTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGGCCGTGATGATGGATaGCCTACTGGCTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRGRDDG*PTGCLT
Trigger: GGTCAAACAGCCAGTAGGTCATCCATCATCACGGCC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTCACCCCAGAACCGATaGCATGGGCATGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQSPQNR*HGHGFP
Trigger: TGGAAAGCCATGCCCATGTCATCGGTTCTGGGGTGA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCAGAAACACGACATCTaGATACACAGGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKQKHDI*IHRAWP
Trigger: GGGCCAGGCCCTGTGTATGCAGATGTCGTGTTTCTG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGTCCCTCCAGTGTCCCTaGGCTTCCGCAGATTCTCAA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRSLQCP*ASADSQ
Trigger: TTGAGAATCTGCGGAAGCGCAGGGACACTGGAGGGA...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTCCCTCCAGTGTCCCTaGGCTTCCGCAGATTCTCAA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKSLQCP*ASADSQ
Trigger: TTGAGAATCTGCGGAAGCGCAGGGACACTGGAGGGA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCTCCCCTGTGTCCTCTaGTGCCTTTCAGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRLPCVL*CLSDLE
Trigger: CTCAAGGTCTGAAAGGCAGCAGAGGACACAGGGGAG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGACCGTAGCCTGGGATaGCAGAATCTCCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQDRSLG*QNLPVF
Trigger: GAAGACAGGGAGATTCTGGCATCCCAGGCTACGGTC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCCTCACGTTGGCTCCTaGATACGTCCGCTTGAACAC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQPHVGS*IRPLEH
Trigger: GTGTTCAAGCGGACGTATGCAGGAGCCAACGTGAGG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCAACTCTCCTCACGTTaGCTCCTGCATACGTCCGCT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRQLSSR*LLHTSA
Trigger: AGCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCCGTCTCTTCTCATCTaGTCAATGGCAGCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQPSLLI*SMAAPV
Trigger: TACAGGGGCTGCCATTGATCAGATGAGAAGAGACGG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCTCCTGGATGCTGCTTaGGCCATCAATGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQLLDAA*AINEEV
Trigger: CACTTCCTCATTGATGGCTCAAGCAGCATCCAGGAG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGGGCATTTGCGTGCTTaGGAGCCTTGGCAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLGHLRA*EPWQCR
Trigger: CCTACACTGCCAAGGCTCTCAAGCACGCAAATGCCC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGTCCAGAAAATCCTTTaGGTCCCTTCTGACCCCACG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKVQKIL*VPSDPT
Trigger: CGTGGGGTCAGAAGGGACTCAAAGGATTTTCTGGAC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGATCCCATCGTCTCCATaGCCTCCCTTAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKIPSSP*PPLGPE
Trigger: TTCTGGACCTAAGGGAGGTCATGGAGACGATGGGAT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATAGCCCAGGAGAACCCTaGGGTCCTTTCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDSPGEP*GPFCPW
Trigger: CCAGGGGCAGAAAGGACCTCAGGGTTCTCCTGGGCT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGTGGGTGACCAGAACTaGAATCTGAGGCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQVGDQN*NLRHSL
Trigger: CAAGGAGTGCCTCAGATTGCAGTTCTGGTCACCCAC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGAACAGGGCATTTGCGTaGTTGAGAGCCTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKNRAFA*LRALAV
Trigger: CACTGCCAAGGCTCTCAAGCACGCAAATGCCCTGTT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGAACAGGGCATTTGCGTaGTTGAGAGCCTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRNRAFA*LRALAV
Trigger: CACTGCCAAGGCTCTCAAGCACGCAAATGCCCTGTT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATCACCTGTGCCTCTGTaGCAGCCCCACAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKSPVPL*QPHSSP
Trigger: GGGTGAGCTGTGGGGCTGGCACAGAGGCACAGGTGA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCCCTGTGTCCTCTGCTaGCTTTCAGACCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQPCVLC*LSDLEN
Trigger: GTTCTCAAGGTCTGAAAGGCAGCAGAGGACACAGGG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCCCTGTCTTCCTCGCTaGCCAGTTTGCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDPCLPR*PVCPTG
Trigger: GCCAGTGGGGCAAACTGGGCAGCGAGGAAGACAGGG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCCCTGTCTTCCTCGCTaGCCAGTTTGCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNPCLPR*PVCPTG
Trigger: GCCAGTGGGGCAAACTGGGCAGCGAGGAAGACAGGG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGGACACTCCGGACCCTaGAAACCGCCCCCAACTCTC +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNGHSGP*KPPPTL
Trigger: GAGAGTTGGGGGCGGTTTCCAGGGTCCGGAGTGTCC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCACAGGGCCTGGCCCTaGGCTCTGGTCTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNHRAWP*ALVCQC
Trigger: ACATTGGCAGACCAGAGCCCAGGGCCAGGCCCTGTG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGCCCCTGCACATGAGTaGAGATGTCAAACCCAACCA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRAPAHE*RCQTQP
Trigger: TGGTTGGGTTTGACATCTCCACTCATGTGCAGGGGC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGCCCCTGCACATGAGTaGAGATGTCAAACCCAACCA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKAPAHE*RCQTQP
Trigger: TGGTTGGGTTTGACATCTCCACTCATGTGCAGGGGC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCTTGAGAACCCTTCATaGCTTGTAGTCCTCGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLENPS*LVVLGS
Trigger: GGACCCGAGGACTACAAGCCATGAAGGGTTCTCAAG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGATTACCCGGATCCCCTaGGAAGCCCTTCTCTCCATA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRITRIP*EALLSI
Trigger: TATGGAGAGAAGGGCTTCCCAGGGGATCCGGGTAAT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCAACTCTCCTCACGTTaGCTCCTGCATACGTCCGCT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVQLSSR*LLHTSA
Trigger: AGCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCTCAAGCATCGGTGGTaGGTACTGATTGAATCCCCG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLKHRW*VLIESP
Trigger: CGGGGATTCAATCAGTACCCACCACCGATGCTTGAG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTGTGCCACCGTTCTCTaGGTTGGGAGAGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKCATVL*VGRGHV
Trigger: AACATGACCTCTCCCAACCCAGAGAACGGTGGCACA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGAACGCCTCGTGCCCTaGGAGGGTCTTTTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDERLVP*EGLLSR
Trigger: CCGGCTTAAAAGACCCTCTCAGGGCACGAGGCGTTC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGGCTGCTATCCCCACTaGTCTCTTCTAGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVGCYPH*SLLAEI
Trigger: GATCTCAGCTAGAAGAGATCAGTGGGGATAGCAGCC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGCTGTGTCATTGAGCTaGTCATGGTCATGGGATTCC +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRAVSLS*SWSWDS
Trigger: GGAATCCCATGACCATGATCAGCTCAATGACACAGC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCCAATGCTGTGTCATTaGGCTGATCATGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRPMLCH*ADHGHG
Trigger: CCCATGACCATGATCAGCTCAATGACACAGCATTGG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCCTTTGAGTCCCTTCTaGCCCCACGCCCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLPLSPF*PHAPGH
Trigger: ATGTCCAGGGGCGTGGGGTCAGAAGGGACTCAAAGG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGATTCCAGGAAATCCATaGCAGCCCTCTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQIPGNP*QPSSPS
Trigger: TGATGGGGAAGAGGGCTGTCATGGATTTCCTGGAAT...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGAACCTGGGCTGCCCTaGGATCCTGGATCACCTTTT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLEPGLP*DPGSPF
Trigger: AAAAGGTGATCCAGGATCTCAGGGCAGCCCAGGTTC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCCTCGGAGTCCCCTTTaGCCTTCTCTTCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLPRSPL*PSLPLL
Trigger: CAGCAGGGGAAGAGAAGGTCAAAGGGGACTCCGAGG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAACCTCGGAGTCCCCTTTaGCCTTCTCTTCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKPRSPL*PSLPLL
Trigger: CAGCAGGGGAAGAGAAGGTCAAAGGGGACTCCGAGG...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGAGATAGCTGGTGCCTaGGTTATAGGAAACCATGGC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKEIAGA*VIGNHG
Trigger: GCCATGGTTTCCTATAACTCAGGCACCAGCTATCTC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCTGCATACGTCCGCTTaGACACGTTGCGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLLHTSA*TRCGSQ
Trigger: TTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTCACCCCAGAACCGATaGCATGGGCATGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLSPQNR*HGHGFP
Trigger: TGGAAAGCCATGCCCATGTCATCGGTTCTGGGGTGA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCTCTCCAGAAGAGGCTaGACCGAGCTCCTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDLSRRG*TELLSA
Trigger: TGCGCTCAGGAGCTCGGTGCAGCCTCTTCTGGAGAG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAGACCGCAAGAACTGTaGGTTCAGATGAGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVRPQEL*VQMSWP
Trigger: GGGCCAACTCATCTGAACGCACAGTTCTTGCGGTCT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGAACTAGGACTGCCTTaGACCCCTTTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKELGLP*TPFCPL
Trigger: AAGTGGACAGAAAGGGGTGCAAGGCAGTCCTAGTTC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCCTCGCTGCCCAGTTTaGCCCACTGGCCCTAGATCT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLPRCPV*PTGPRS
Trigger: AGATCTAGGGCCAGTGGGGCAAACTGGGCAGCGAGG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCCTCGCTGCCCAGTTTaGCCCACTGGCCCTAGATCT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDPRCPV*PTGPRS
Trigger: AGATCTAGGGCCAGTGGGGCAAACTGGGCAGCGAGG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCCACGACTCTGTCTGTaGACATCCCATCAGTCAACA +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQPRLCL*TSHQST
Trigger: TGTTGACTGATGGGATGTCCACAGACAGAGTCGTGG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGATTCCAGCTGGGGGTaGCCCTGGAACAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKDSSWG*PWNKGC
Trigger: GCAGCCTTTGTTCCAGGGCCACCCCCAGCTGGAATC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGTGCGTTCAGATGAGTTaGCCCACTGACGTTGACTTG +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRCVQMS*PTDVDL
Trigger: CAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCA...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGGTCCCATGAGGTCCTaGAATTCCTGGACATTTGCA +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQGPMRS*NSWTFA
Trigger: TGCAAATGTCCAGGAATTCCAGGACCTCATGGGACC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCCCTGTCTCCTAAGGTaGAGGTCAGTGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLPCLLR*RSVEWG
Trigger: CCCCCACTCCACTGACCTCCACCTTAGGAGACAGGG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGCCCTGTCTCCTAAGGTaGAGGTCAGTGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKPCLLR*RSVEWG
Trigger: CCCCCACTCCACTGACCTCCACCTTAGGAGACAGGG...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCCCTGTCTCCTAAGGTaGAGGTCAGTGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNPCLLR*RSVEWG
Trigger: CCCCCACTCCACTGACCTCCACCTTAGGAGACAGGG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGTTAGGCATATAGCCTaGAGGAGAGTAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRVRHIA*RRVAQD
Trigger: GTCCTGAGCTACTCTCCTCCAGGCTATATGCCTAAC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGTTAGGCATATAGCCTaGAGGAGAGTAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQVRHIA*RRVAQD
Trigger: GTCCTGAGCTACTCTCCTCCAGGCTATATGCCTAAC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTGTGCCACCGTTCTCTaGGTTGGGAGAGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVCATVL*VGRGHV
Trigger: AACATGACCTCTCCCAACCCAGAGAACGGTGGCACA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTTTCACGAATGGGAATaGCTTAGGTCCCAGGTGATC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKFHEWE*LRSQVI
Trigger: GATCACCTGGGACCTAAGTCATTCCCATTCGTGAAA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGAGATGGAATTCACTGTaGAACTCGTCGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQRWNSL*NSSLYW
Trigger: CCAGTACAGCGACGAGTTTCACAGTGAATTCCATCT...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCACGAGGTCAGCGAGTaGATCTTTCTGACAGGATAT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRHEVSE*IFLTGY
Trigger: ATATCCTGTCAGAAAGATTCACTCGCTGACCTCGTG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCACGAGGTCAGCGAGTaGATCTTTCTGACAGGATAT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKHEVSE*IFLTGY
Trigger: ATATCCTGTCAGAAAGATTCACTCGCTGACCTCGTG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTCCTCCGGTCCCAAGTaGCTCATCCACCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESSSGPK*LIHQEH
Trigger: GTGTTCCTGGTGGATGAGTCACTTGGGACCGGAGGA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCCAATGCCAACTGCATaGACAGTGATTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVPMPTA*TVICSA
Trigger: GGCTGAGCAAATCACTGTTCATGCAGTTGGCATTGG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCCCCCTTGGAGTGGGTaGAGTATTGACCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKPPWSG*SIDLQN
Trigger: ATTTTGTAGGTCAATACTTCACCCACTCCAAGGGGG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGGGCATTTGCGTGCTTaGGAGCCTTGGCAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLGHLRA*EPWQCR
Trigger: CCTACACTGCCAAGGCTCTCAAGCACGCAAATGCCC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTAACTGTGCGTTCAGATaGGTTGGCCCACTGACGTTG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLNCAFR*VGPLTL
Trigger: CAACGTCAGTGGGCCAACTCATCTGAACGCACAGTT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATAGTCCTCGGGTCCCATaGGGTCCTGGAATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDSPRVP*GPGIPG
Trigger: TCCAGGAATTCCAGGACCTCATGGGACCCGAGGACT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTGCCTTTCAGACCTTaGGAACCCTTCATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVLPFRP*EPFMAC
Trigger: ACAAGCCATGAAGGGTTCTCAAGGTCTGAAAGGCAG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGAAGTTGTCAATCACTaGGCTCACCAAGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQEVVNH*AHQGFH
Trigger: GTGAAAGCCTTGGTGAGCTCAGTGATTGACAACTTC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAATCGGTGGTGGGTACTaGTTGAATCCCCGCCTGACC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKIGGGY*LNPRLT
Trigger: GGTCAGGCGGGGATTCAATCAGTACCCACCACCGAT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATATCGGTGGTGGGTACTaGTTGAATCCCCGCCTGACC +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNIGGGY*LNPRLT
Trigger: GGTCAGGCGGGGATTCAATCAGTACCCACCACCGAT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTGGGTCATAGCAGCCTaGCAGGTGGGTTTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVWVIAA*QVGFRR
Trigger: TCTTCTAAAACCCACCTGTCAGGCTGCTATGACCCA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGACGCTCCAGCTGTTTaGTGGCTTTGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKDAPAV*WLCFRE
Trigger: TTCTCTGAAACAAAGCCAGCAAACAGCTGGAGCGTC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTGCCCCAATGCCAACTaGATGAACAGTGATTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKCPNAN*MNSDLL
Trigger: GAGCAAATCACTGTTCATGCAGTTGGCATTGGGGCA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGAACTAGGACTGCCTTaGACCCCTTTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVELGLP*TPFCPL
Trigger: AAGTGGACAGAAAGGGGTGCAAGGCAGTCCTAGTTC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGATATACAGGCTGCCCTaGCATGCCTTTAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKIYRLP*HAFNAS
Trigger: AGAGGCATTAAAGGCATGGCAGGGCAGCCTGTATAT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGGTCACAAACCTCATTaGATTACCAACATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQGHKPH*ITNISG
Trigger: CCCCGAGATGTTGGTAATGCAATGAGGTTTGTGACC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCTCCTACAGAGAAGATaGTCACATCTTTGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRLLQRR*SHLCPE
Trigger: TTCGGGGCAAAGATGTGACCATCTTCTCTGTAGGAG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCTCCTACAGAGAAGATaGTCACATCTTTGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLLQRR*SHLCPE
Trigger: TTCGGGGCAAAGATGTGACCATCTTCTCTGTAGGAG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCAAGTTCCTTTTGGTTaGCCTTTCCTACACCCACTG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKQVPFG*PFLHPL
Trigger: CAGTGGGTGTAGGAAAGGCCAACCAAAAGGAACTTG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGAAAATAAGCAGCACCTaGCCCCGGGATGCAGATTTA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKKISST*PRDADL
Trigger: TAAATCTGCATCCCGGGGCCAGGTGCTGCTTATTTT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCTGACCCCACGCCCCTaGACATCCTGCAATCCCTTT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDLTPRP*TSCNPF
Trigger: AAAGGGATTGCAGGATGTCCAGGGGCGTGGGGTCAG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGTTATTGTTTTGTCCTaGATTACCCGGATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQVIVLS*ITRIPW
Trigger: CCAGGGGATCCGGGTAATCCAGGACAAAACAATAAC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGATTTGGGAAAGCTGCTaGAGGAGCTGCTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKIWESC*RSCFFL
Trigger: TAGGAAGAAGCAGCTCCTCCAGCAGCTTTCCCAAAT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGATCAAGTGGGTAGCTaGCTAACTCCTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKDQVGS*LTPPCH
Trigger: ATGACATGGAGGAGTTAGCCAGCTACCCACTTGATC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGATCCTCAAGCATCGGTaGTGGGTACTGATTGAATCC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKILKHR*WVLIES
Trigger: GGATTCAATCAGTACCCACCACCGATGCTTGAGGAT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGATCCTCAAGCATCGGTaGTGGGTACTGATTGAATCC +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRILKHR*WVLIES
Trigger: GGATTCAATCAGTACCCACCACCGATGCTTGAGGAT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGATATAGTTCCAATCTaGCTTGTGGGTTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKDIVPI*LVGSAK
Trigger: CTTGGCCGAACCCACAAGCCAGATTGGAACTATATC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGTCACAAGTTTTAATGTaGGTGTCCAGAGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRSQVLM*VSRDAP
Trigger: TGGAGCGTCTCTGGACACTCACATTAAAACTTGTGA...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTTCACGAATGGGAATaGCTTAGGTCCCAGGTGATC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVFHEWE*LRSQVI
Trigger: GATCACCTGGGACCTAAGTCATTCCCATTCGTGAAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAGATGGAATTCACTGTaGAACTCGTCGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVRWNSL*NSSLYW
Trigger: CCAGTACAGCGACGAGTTTCACAGTGAATTCCATCT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCACTTCTGTGTCATCTaGATACTGCACAACTCCAAC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKHFCVI*ILHNSN
Trigger: GTTGGAGTTGTGCAGTATTCAGATGACACAGAAGTG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCACTTCTGTGTCATCTaGATACTGCACAACTCCAAC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQHFCVI*ILHNSN
Trigger: GTTGGAGTTGTGCAGTATTCAGATGACACAGAAGTG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTGAGGGCTCCAAACTaGACTCGGTCCCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDLRAPN*TRSLPT
Trigger: TGTTGGCAGGGACCGAGTTCAGTTTGGAGCCCTCAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTTGAGGGCTCCAAACTaGACTCGGTCCCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLLRAPN*TRSLPT
Trigger: TGTTGGCAGGGACCGAGTTCAGTTTGGAGCCCTCAA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGCTTCACATTTTGCTTaGTGCGGCTGCCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLASHFA*CGCHVP
Trigger: AGGAACATGGCAGCCGCATCAAGCAAAATGTGAAGC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGAACCTGGGCTGCCCTaGGATCCTGGATCACCTTTT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLEPGLP*DPGSPF
Trigger: AAAAGGTGATCCAGGATCTCAGGGCAGCCCAGGTTC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGATTTCCTGGTTCTCCTaGGACACCTCGGAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLISWFS*DTSESP
Trigger: AGGGGACTCCGAGGTGTCTCAGGAGAACCAGGAAAT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGAGATAGCTGGTGCCTaGGTTATAGGAAACCATGGC +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLEIAGA*VIGNHG
Trigger: GCCATGGTTTCCTATAACTCAGGCACCAGCTATCTC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATAGTCAGACCAGCGGATaGGATAGCTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNSQTSG*DSWCLS
Trigger: ACTCAGGCACCAGCTATCTCATCCGCTGGTCTGACT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGAGTCAGACCAGCGGATaGGATAGCTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSQTSG*DSWCLS
Trigger: ACTCAGGCACCAGCTATCTCATCCGCTGGTCTGACT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCTGCATACGTCCGCTTaGACACGTTGCGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLHTSA*TRCGSQ
Trigger: TTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGGCCGTGATGATGGATaGCCTACTGGCTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESGRDDG*PTGCLT
Trigger: GGTCAAACAGCCAGTAGGTCATCCATCATCACGGCC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGGCCGTGATGATGGATaGCCTACTGGCTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKGRDDG*PTGCLT
Trigger: GGTCAAACAGCCAGTAGGTCATCCATCATCACGGCC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTCACCCCAGAACCGATaGCATGGGCATGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLSPQNR*HGHGFP
Trigger: TGGAAAGCCATGCCCATGTCATCGGTTCTGGGGTGA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTGGGTCATAGCAGCCTaGCAGGTGGGTTTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLWVIAA*QVGFRR
Trigger: TCTTCTAAAACCCACCTGTCAGGCTGCTATGACCCA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAACAGAAACACGACATCTaGATACACAGGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKQKHDI*IHRAWP
Trigger: GGGCCAGGCCCTGTGTATGCAGATGTCGTGTTTCTG...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTGCCCCAATGCCAACTaGATGAACAGTGATTTGCTC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVCPNAN*MNSDLL
Trigger: GAGCAAATCACTGTTCATGCAGTTGGCATTGGGGCA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGTCCCTGCCAACATCTaGTTTCTTCACCAAATGGAT +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQVPANI*FLHQMD
Trigger: ATCCATTTGGTGAAGAAAGCAGATGTTGGCAGGGAC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTGTAAACAGGGCATTTaGGTGCTTGAGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLCKQGI*VLESLG
Trigger: GCCAAGGCTCTCAAGCACGCAAATGCCCTGTTTACA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCTTTCCTACACCCACTaGAAAGATGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQLSYTH*KDGDAF
Trigger: AAAGGCATCACCATCTTTGCAGTGGGTGTAGGAAAG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCTTTCCTACACCCACTaGAAAGATGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRLSYTH*KDGDAF
Trigger: AAAGGCATCACCATCTTTGCAGTGGGTGTAGGAAAG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGATGACAGACCTCTGGTaGTTCAGTACACATACGTTC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQMTDLW*FSTHTF
Trigger: GAACGTATGTGTACTGAAGCACCAGAGGTCTGTCAT...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGGTTTTTACTGCATCTaGCACATCATAGCGAGGATC +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRGFYCI*HIIARI
Trigger: GATCCTCGCTATGATGTGGCAGATGCAGTAAAAACC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAACTCCCCTGTGTCCTCTaGTGCCTTTCAGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKLPCVL*CLSDLE
Trigger: CTCAAGGTCTGAAAGGCAGCAGAGGACACAGGGGAG...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGACCGTAGCCTGGGATaGCAGAATCTCCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESDRSLG*QNLPVF
Trigger: GAAGACAGGGAGATTCTGGCATCCCAGGCTACGGTC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTATATACAGGCTGCCCTaGCATGCCTTTAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVIYRLP*HAFNAS
Trigger: AGAGGCATTAAAGGCATGGCAGGGCAGCCTGTATAT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGAACCATGGCAACTCTTaGTCCCACAGGACAGTTATT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRNHGNS*SHRTVI
Trigger: AATAACTGTCCTGTGGGAGCAAGAGTTGCCATGGTT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGGTCACAAACCTCATTaGATTACCAACATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVGHKPH*ITNISG
Trigger: CCCCGAGATGTTGGTAATGCAATGAGGTTTGTGACC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCCTCACGTTGGCTCCTaGATACGTCCGCTTGAACAC +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLPHVGS*IRPLEH
Trigger: GTGTTCAAGCGGACGTATGCAGGAGCCAACGTGAGG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTATACAGTGTTTTCTGTaGCACCGTTCTCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVIQCFL*HRSLGW
Trigger: CCAACCCAGAGAACGGTGGCACAGAAAACACTGTAT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAACTCGTCGCTGTACTaGGCCAGGGCTACACGGTAT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESNSSLY*ARATRY
Trigger: ATACCGTGTAGCCCTGGCCCAGTACAGCGACGAGTT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTAACTCGTCGCTGTACTaGGCCAGGGCTACACGGTAT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLNSSLY*ARATRY
Trigger: ATACCGTGTAGCCCTGGCCCAGTACAGCGACGAGTT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCATAGGACTTCAGCGTaGAAATTGTCTGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRHRTSA*KLSVLE
Trigger: CTCCAGAACAGACAATTTCCACGCTGAAGTCCTATG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGTTTTCCCACAGCTCTaGCAGATTTCACGGATGATT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKVFPQL*QISRMI
Trigger: AATCATCCGTGAAATCTGCCAGAGCTGTGGGAAAAC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAAAATAAGCAGCACCTaGCCCCGGGATGCAGATTTA +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVKISST*PRDADL
Trigger: TAAATCTGCATCCCGGGGCCAGGTGCTGCTTATTTT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAACATCTGACCGTAGCCTaGGATGCCAGAATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKHLTVA*DARISL
Trigger: CAGGGAGATTCTGGCATCCCAGGCTACGGTCAGATG...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCATCTGACCGTAGCCTaGGATGCCAGAATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLHLTVA*DARISL
Trigger: CAGGGAGATTCTGGCATCCCAGGCTACGGTCAGATG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAACAACTCTCCTCACGTTaGCTCCTGCATACGTCCGCT +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKQLSSR*LLHTSA
Trigger: AGCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTG...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGTCCACTGCAAGGCATaGCCAATAAAAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRVHCKA*PIKTSP
Trigger: TGGAGATGTTTTTATTGGCCATGCCTTGCAGTGGAC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCCGTCTCTTCTCATCTaGTCAATGGCAGCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLPSLLI*SMAAPV
Trigger: TACAGGGGCTGCCATTGATCAGATGAGAAGAGACGG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCTGATGGTCTGTGGGTaGCCAGAACTGCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDLMVCG*PELQSE
Trigger: CTCAGATTGCAGTTCTGGTCACCCACAGACCATCAG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCTGATGGTCTGTGGGTaGCCAGAACTGCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLMVCG*PELQSE
Trigger: CTCAGATTGCAGTTCTGGTCACCCACAGACCATCAG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATATGCACCTCATCATCTaGTGGTCTGTGGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNMHLII*WSVGDQ
Trigger: CTGGTCACCCACAGACCATCAGATGATGAGGTGCAT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCATGCACCTCATCATCTaGTGGTCTGTGGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESMHLII*WSVGDQ
Trigger: CTGGTCACCCACAGACCATCAGATGATGAGGTGCAT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCCCCCTTGGAGTGGGTaGAGTATTGACCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLPPWSG*SIDLQN
Trigger: ATTTTGTAGGTCAATACTTCACCCACTCCAAGGGGG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGGCTGCTATCCCCACTaGTCTCTTCTAGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESGCYPH*SLLAEI
Trigger: GATCTCAGCTAGAAGAGATCAGTGGGGATAGCAGCC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTATGCTACCTGAATaGTCCAGCACAAACACAACG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQFMLPE*SSTNTT
Trigger: CGTTGTGTTTGTGCTGGATCATTCAGGTAGCATAAA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTACTCTGGAGACCGTCTaGAAAAATAAGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLTLETV*KNKQHL
Trigger: CAGGTGCTGCTTATTTTTTCAGACGGTCTCCAGAGT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGTCCAGAAAATCCTTTaGGTCCCTTCTGACCCCACG +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLVQKIL*VPSDPT
Trigger: CGTGGGGTCAGAAGGGACTCAAAGGATTTTCTGGAC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTATCCCATCGTCTCCATaGCCTCCCTTAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLIPSSP*PPLGPE
Trigger: TTCTGGACCTAAGGGAGGTCATGGAGACGATGGGAT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCGGATCAGATCACATTaGGAATATACAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLRIRSH*EYTGCP
Trigger: AGGGCAGCCTGTATATTCTCAATGTGATCTGATCCG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGGCTCTGTGGTGTCTTaGTATTTTATTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQGSVVS*YFIWES
Trigger: GCTTTCCCAAATAAAATATCAAGACACCACAGAGCC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGAAGGAAGTCTGGATGTaGTTCTTCATTAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQKEVWM*FFIRSW
Trigger: CCAACTCCTAATGAAGAATCACATCCAGACTTCCTT...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGTCAGGTCTTCTTACTaGTGTCTTCACTCCGAAAAT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRVRSSY*CLHSEN
Trigger: ATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGAC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATAGAGAAGCCGCCGGCTaGCAAATGAACTTAGGGAGT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDREAAG*QMNLGS
Trigger: ACTCCCTAAGTTCATTTGGCAGCCGGCGGCTTCTCT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAGAGAAGCCGCCGGCTaGCAAATGAACTTAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESREAAG*QMNLGS
Trigger: ACTCCCTAAGTTCATTTGGCAGCCGGCGGCTTCTCT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTTCACCCCGTCTTTCTaGAGGGCTTTCGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLFTPSF*RAFEAS
Trigger: AGAGGCTTCGAAAGCCCTGCAGAAAGACGGGGTGAA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTTCACCCCGTCTTTCTaGAGGGCTTTCGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLFTPSF*RAFEAS
Trigger: AGAGGCTTCGAAAGCCCTGCAGAAAGACGGGGTGAA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGTGGGTGACCAGAACTaGAATCTGAGGCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESVGDQN*NLRHSL
Trigger: CAAGGAGTGCCTCAGATTGCAGTTCTGGTCACCCAC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGTTTCTCAGTTCCAATaGTGTGTCATTGAGCTGATC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQVSQFQ*CVIELI
Trigger: GATCAGCTCAATGACACAGCATTGGAACTGAGAAAC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTAGACCGCAAGAACTGTaGGTTCAGATGAGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLRPQEL*VQMSWP
Trigger: GGGCCAACTCATCTGAACGCACAGTTCTTGCGGTCT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCACCTGGCCCCGGGATaGAGATTTATCCTTAAATGT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLHLAPG*RFILKC
Trigger: ACATTTAAGGATAAATCTGCATCCCGGGGCCAGGTG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCCCTGTGTCCTCTGCTaGCTTTCAGACCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNPCVLC*LSDLEN
Trigger: GTTCTCAAGGTCTGAAAGGCAGCAGAGGACACAGGG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCCAATATCACCCTTCTaGCCCGCATCTCCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDPISPF*PASPGN
Trigger: ATTCCCTGGAGATGCGGGGCAGAAGGGTGATATTGG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCCAATATCACCCTTCTaGCCCGCATCTCCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNPISPF*PASPGN
Trigger: ATTCCCTGGAGATGCGGGGCAGAAGGGTGATATTGG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAACCATGGCAACTCTTaGTCCCACAGGACAGTTATT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVNHGNS*SHRTVI
Trigger: AATAACTGTCCTGTGGGAGCAAGAGTTGCCATGGTT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCTTGAGAACCCTTCATaGCTTGTAGTCCTCGGGTCC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLLENPS*LVVLGS
Trigger: GGACCCGAGGACTACAAGCCATGAAGGGTTCTCAAG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATATCCCTTTGTCTCCTTaGGGTCCTGTGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDIPLSP*GPVSPR
Trigger: ACGAGGAGACACAGGACCCCAAGGAGACAAAGGGAT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGCTGCCCTGAGATCCTaGATCACCTTTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLAALRS*ITFFSF
Trigger: AAAGGAGAAAAAGGTGATCCAGGATCTCAGGGCAGC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTTATTGTTTTGTCCTaGATTACCCGGATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLVIVLS*ITRIPW
Trigger: CCAGGGGATCCGGGTAATCCAGGACAAAACAATAAC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGAAAAGCAAAGACTGTTaGACTGATATCCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQKSKDC*TDIQGT
Trigger: AGTGCCCTGGATATCAGTCCAACAGTCTTTGCTTTT...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCCCATTTGGAGGAACTaGAATCACCTGAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVPIWRN*NHLKCS
Trigger: GGAACATTTCAGGTGATTCCAGTTCCTCCAAATGGG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTTGATTTTCCCCATTTaGAGGAACTGGAATCACCTG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLIFPI*RNWNHL
Trigger: CAGGTGATTCCAGTTCCTCCAAATGGGGAAAATCAA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTACCCATCTTTCTCCTaGAACTTTCCCAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQYPSFS*NFPKEN
Trigger: ATTCTCCTTGGGAAAGTTCCAGGAGAAAGATGGGTA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCTCAAGCATCGGTGGTaGGTACTGATTGAATCCCCG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLLKHRW*VLIESP
Trigger: CGGGGATTCAATCAGTACCCACCACCGATGCTTGAG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCTCAAGCATCGGTGGTaGGTACTGATTGAATCCCCG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLKHRW*VLIESP
Trigger: CGGGGATTCAATCAGTACCCACCACCGATGCTTGAG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTATCCTCAAGCATCGGTaGTGGGTACTGATTGAATCC +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLILKHR*WVLIES
Trigger: GGATTCAATCAGTACCCACCACCGATGCTTGAGGAT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTTCCAATCTGGCTTGTaGGTTCGGCCAAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNFQSGL*VRPSWT
Trigger: GGTCCAACTTGGCCGAACCCACAAGCCAGATTGGAA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATTCCAATCTGGCTTGTaGGTTCGGCCAAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKFQSGL*VRPSWT
Trigger: GGTCCAACTTGGCCGAACCCACAAGCCAGATTGGAA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTCCAATCTGGCTTGTaGGTTCGGCCAAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKFQSGL*VRPSWT
Trigger: GGTCCAACTTGGCCGAACCCACAAGCCAGATTGGAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTCCAATCTGGCTTGTaGGTTCGGCCAAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDFQSGL*VRPSWT
Trigger: GGTCCAACTTGGCCGAACCCACAAGCCAGATTGGAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTGTGCCACCGTTCTCTaGGTTGGGAGAGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLCATVL*VGRGHV
Trigger: AACATGACCTCTCCCAACCCAGAGAACGGTGGCACA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTGTGCCACCGTTCTCTaGGTTGGGAGAGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKCATVL*VGRGHV
Trigger: AACATGACCTCTCCCAACCCAGAGAACGGTGGCACA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCTGGTTAGAACCACATaGGATTATACATGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQLVRTT*DYTCQW
Trigger: CCACTGACATGTATAATCCCATGTGGTTCTAACCAG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCTGGTTAGAACCACATaGGATTATACATGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLVRTT*DYTCQW
Trigger: CCACTGACATGTATAATCCCATGTGGTTCTAACCAG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTGGGGCTTCTGCCTTTaGAGGTGCTCAGATGGAATT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESWGFCL*RCSDGI
Trigger: AATTCCATCTGAGCACCTTCAAAGGCAGAAGCCCCA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATGGGGCTTCTGCCTTTaGAGGTGCTCAGATGGAATT +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKWGFCL*RCSDGI
Trigger: AATTCCATCTGAGCACCTTCAAAGGCAGAAGCCCCA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCCAATGCCAACTGCATaGACAGTGATTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDPMPTA*TVICSA
Trigger: GGCTGAGCAAATCACTGTTCATGCAGTTGGCATTGG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTCGAAGTTCTCAACATaGAAAACTAGGCTGCTATCC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVSKFST*KTRLLS
Trigger: GGATAGCAGCCTAGTTTTTCATGTTGAGAACTTCGA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGCTTCACATTTTGCTTaGTGCGGCTGCCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNASHFA*CGCHVP
Trigger: AGGAACATGGCAGCCGCATCAAGCAAAATGTGAAGC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGCTGTGTCATTGAGCTaGTCATGGTCATGGGATTCC +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDAVSLS*SWSWDS
Trigger: GGAATCCCATGACCATGATCAGCTCAATGACACAGC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCTGCCTTTCAGACCTTaGGAACCCTTCATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDLPFRP*EPFMAC
Trigger: ACAAGCCATGAAGGGTTCTCAAGGTCTGAAAGGCAG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCATTCCAGGAAATCCATaGCAGCCCTCTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESIPGNP*QPSSPS
Trigger: TGATGGGGAAGAGGGCTGTCATGGATTTCCTGGAAT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGAGATAGCTGGTGCCTaGGTTATAGGAAACCATGGC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESEIAGA*VIGNHG
Trigger: GCCATGGTTTCCTATAACTCAGGCACCAGCTATCTC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAAGGAAGTCTGGATGTaGTTCTTCATTAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVKEVWM*FFIRSW
Trigger: CCAACTCCTAATGAAGAATCACATCCAGACTTCCTT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCTGAGACCACAAAGATaGCCTTGTGTTTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLRPQR*PCVFLD
Trigger: ATCTAAGAAAACACAAGGTCATCTTTGTGGTCTCAG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCTGAGACCACAAAGATaGCCTTGTGTTTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRLRPQR*PCVFLD
Trigger: ATCTAAGAAAACACAAGGTCATCTTTGTGGTCTCAG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGATAATTTTCTCCAGCTaGGACCACAAAGATGACCTT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKIIFSS*DHKDDL
Trigger: AAGGTCATCTTTGTGGTCTCAGCTGGAGAAAATTAT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTTCATGTCCAGAAGTaGGACTTGCAATTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVFHVQK*DLQFLQ
Trigger: CTGCAGAAATTGCAAGTCTCACTTCTGGACATGAAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTCAGAACCACTACTATaGTTGTTCCCTAATACAAGG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKSEPLL*LFPNTR
Trigger: CCTTGTATTAGGGAACAATCATAGTAGTGGTTCTGA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTACAATCACTGCTAGATaGAATGTTAGGGTCACCCCA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLTITAR*NVRVTP
Trigger: TGGGGTGACCCTAACATTTCATCTAGCAGTGATTGT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTGGGTCATAGCAGCCTaGCAGGTGGGTTTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLWVIAA*QVGFRR
Trigger: TCTTCTAAAACCCACCTGTCAGGCTGCTATGACCCA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTTCTATTTTATTAGCTaGCCCAATGCCAACTGCATG +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKFYFIS*PNANCM
Trigger: CATGCAGTTGGCATTGGGGCAGCTAATAAAATAGAA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATGTAAACAGGGCATTTaGGTGCTTGAGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKCKQGI*VLESLG
Trigger: GCCAAGGCTCTCAAGCACGCAAATGCCCTGTTTACA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCTTCAGGGTTTTTACTaGATCTGCCACATCATAGCG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLLQGFY*ICHIIA
Trigger: CGCTATGATGTGGCAGATGCAGTAAAAACCCTGAAG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGTTTCAAGCATTATGTTaGTTTCACTCTGGAGACCGT +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRFQALC*FHSGDR
Trigger: ACGGTCTCCAGAGTGAAAGCAACATAATGCTTGAAA...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTTATCATAGCAAAGTaGACAGCGCCGAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVFIIAK*TAPKSF
Trigger: GAAAGACTTCGGCGCTGTGCACTTTGCTATGATAAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTTGTCAATTGTCCACTaGAAGGCATGGCCAATAAAA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLSIVH*KAWPIK
Trigger: TTTTATTGGCCATGCCTTGCAGTGGACAATTGACAA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGTACAAGGAGATGTTGTaGCTGGGAATCAAATTCATC +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRYKEML*LGIKFI
Trigger: GATGAATTTGATTCCCAGGCACAACATCTCCTTGTA...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGACTATTTCTTCTAACTaGGTATTGTTAGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRTISSN*VLLAPW
Trigger: CCAAGGGGCTAACAATACCCAGTTAGAAGAAATAGT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCCATCAATGAGGAAGTaGATATCAGCCTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKPSMRK*ISASFV
Trigger: TACAAAAGAGGCTGATATCCACTTCCTCATTGATGG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTCAAACTGTTTCTCCTaGATGCTGCTTGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLSNCFS*MLLEPS
Trigger: TGATGGCTCAAGCAGCATCCAGGAGAAACAGTTTGA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCCACGACTCTGTCTGTaGACATCCCATCAGTCAACA +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLPRLCL*TSHQST
Trigger: TGTTGACTGATGGGATGTCCACAGACAGAGTCGTGG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCTAGCTGAGATCTATTaGCATTGTATACTCCTACAG +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQLAEIY*HCILLQ
Trigger: CTGTAGGAGTATACAATGCCAATAGATCTCAGCTAG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCCCTCAAGTTCCTTTTaGTTGGCCTTTCCTACACCC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESPSSSF*LAFPTP
Trigger: GGGTGTAGGAAAGGCCAACCAAAAGGAACTTGAGGG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCCCTCAAGTTCCTTTTaGTTGGCCTTTCCTACACCC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLPSSSF*LAFPTP
Trigger: GGGTGTAGGAAAGGCCAACCAAAAGGAACTTGAGGG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGGCAAAGTCAATTCTTaGAAATCCACCGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLGKVNS*KSTALG
Trigger: TCCAAGAGCGGTGGATTTCCAAGAATTGACTTTGCC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGATAGATTTGGAACTTaGCAGGGAATCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLDRFGT*QGILGH
Trigger: GTGACCAAGGATTCCCTGCCAAGTTCCAAATCTATC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTGCGTTCAGATGAGTTaGCCCACTGACGTTGACTTG +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLCVQMS*PTDVDL
Trigger: CAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGGTCCCATGAGGTCCTaGAATTCCTGGACATTTGCA +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLGPMRS*NSWTFA
Trigger: TGCAAATGTCCAGGAATTCCAGGACCTCATGGGACC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATCCAGGGAATCCTCTTaGGCCCTTTACTCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKSRESS*ALYSFS
Trigger: CGAAAAGGAGTAAAGGGCCCAAGAGGATTCCCTGGA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTCCAGGGAATCCTCTTaGGCCCTTTACTCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDSRESS*ALYSFS
Trigger: CGAAAAGGAGTAAAGGGCCCAAGAGGATTCCCTGGA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAAAAGCAAAGACTGTTaGACTGATATCCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVKSKDC*TDIQGT
Trigger: AGTGCCCTGGATATCAGTCCAACAGTCTTTGCTTTT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTCACTTCCTACTCTTTaGGAAGCATCTATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKSLPTL*EASMRK
Trigger: TTTCCTCATAGATGCTTCCCAAAGAGTAGGAAGTGA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGGTTAGGCATATAGCCTaGAGGAGAGTAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKVRHIA*RRVAQD
Trigger: GTCCTGAGCTACTCTCCTCCAGGCTATATGCCTAAC...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTCCACTGCAAGGCATaGCCAATAAAAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLVHCKA*PIKTSP
Trigger: TGGAGATGTTTTTATTGGCCATGCCTTGCAGTGGAC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTGTTTTTCCTCAGATTaGGGGTTCCTACAAAGACAT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKCFSSD*GFLQRH
Trigger: ATGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGCACGTCTGATTAAATaGACAAATGGCTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQARLIK*TNGLTN
Trigger: GTTTGTCAAGCCATTTGTCCATTTAATCAGACGTGC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCTCTGTTGGATATGCTaGACATTTTTCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRLCWIC*TFFFPA
Trigger: TGCTGGAAAGAAAAATGTCCAGCATATCCAACAGAG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312481.11
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTCTCAAGGAAGGTCTaGAGATGCCTTAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVFSRKV*RCLKFP
Trigger: AGGAAATTTAAGGCATCTTCAGACCTTCCTTGAGAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTGCTTGAGCCATCAATaGGGAAGTGGATATCAGCCT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESCLSHQ*GSGYQP
Trigger: AGGCTGATATCCACTTCCTCATTGATGGCTCAAGCA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCATCAGTCAACACAATaGGGTAACAGGGAACCTTGC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESHQSTQ*GNREPC
Trigger: GCAAGGTTCCCTGTTACCTCATTGTGTTGACTGATG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCATCAGTCAACACAATaGGGTAACAGGGAACCTTGC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLHQSTQ*GNREPC
Trigger: GCAAGGTTCCCTGTTACCTCATTGTGTTGACTGATG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGTTTTATCACTGAACTaGACAACACCAATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVVLSLN*TTPIWV
Trigger: AACCCAGATTGGTGTTGTTCAGTTCAGTGATAAAAC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTTTATGCTACCTGAATaGTCCAGCACAAACACAACG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLFMLPE*SSTNTT
Trigger: CGTTGTGTTTGTGCTGGATCATTCAGGTAGCATAAA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGTTGGTCAGAGTATTTaGGGGCTCCAAACTGAACTC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKVGQSI*GLQTEL
Trigger: GAGTTCAGTTTGGAGCCCTCAAATACTCTGACCAAC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGTTGGTCAGAGTATTTaGGGGCTCCAAACTGAACTC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESVGQSI*GLQTEL
Trigger: GAGTTCAGTTTGGAGCCCTCAAATACTCTGACCAAC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCATGGTTACAAAATCTaGATTAGATACCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRHGYKI*IRYPVR
Trigger: TCTGACAGGGTATCTAATTCAGATTTTGTAACCATG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTACTCTGGAGACCGTCTaGAAAAATAAGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLTLETV*KNKQHL
Trigger: CAGGTGCTGCTTATTTTTTCAGACGGTCTCCAGAGT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGAAGTTGTCAATCACTaGGCTCACCAAGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKEVVNH*AHQGFH
Trigger: GTGAAAGCCTTGGTGAGCTCAGTGATTGACAACTTC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTAAGGAAGTCTGGATGTaGTTCTTCATTAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLKEVWM*FFIRSW
Trigger: CCAACTCCTAATGAAGAATCACATCCAGACTTCCTT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTATAATTTTCTCCAGCTaGGACCACAAAGATGACCTT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVIIFSS*DHKDDL
Trigger: AAGGTCATCTTTGTGGTCTCAGCTGGAGAAAATTAT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTAATTCTTGGCCAATaGAGCCATTACCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVLILGQ*SHYLPK
Trigger: TTTTGGGAGGTAATGGCTTCATTGGCCAAGAATTAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTTTCATGTCCAGAAGTaGGACTTGCAATTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLFHVQK*DLQFLQ
Trigger: CTGCAGAAATTGCAAGTCTCACTTCTGGACATGAAA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTATACATCATCAAAATTaGTGCCTGAACTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVIHHQN*CLNCAE
Trigger: CTCTGCACAGTTCAGGCATCAATTTTGATGATGTAT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTTGTCAATGTCCTGGTaGAGAGAAAGCATTAACTAT +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKLSMSW*RESINY
Trigger: ATAGTTAATGCTTTCTCTTCACCAGGACATTGACAA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGTCAATGTCCTGGTaGAGAGAAAGCATTAACTAT +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQLSMSW*RESINY
Trigger: ATAGTTAATGCTTTCTCTTCACCAGGACATTGACAA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGACGCTCCAGCTGTTTaGTGGCTTTGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDDAPAV*WLCFRE
Trigger: TTCTCTGAAACAAAGCCAGCAAACAGCTGGAGCGTC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTCAGTCCAAGTCGCATaGAATTTTCCTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLSVQVA*NFPSHP
Trigger: TGGATGTGAAGGAAAATTGCATGCGACTTGGACTGA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCTTGTGCTCTTCTGCTaGCATATGACTCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLVLFC*HMTLRS
Trigger: GCTTCTCAGAGTCATATGGCAGCAGAAGAGCACAAG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCTTGTGCTCTTCTGCTaGCATATGACTCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLLVLFC*HMTLRS
Trigger: GCTTCTCAGAGTCATATGGCAGCAGAAGAGCACAAG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTTCAGCGCAGCATCATaGACCTCATCATCTGATGGT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLFSAAS*TSSSDG
Trigger: ACCATCAGATGATGAGGTGCATGATGCTGCGCTGAA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTCAGCGCAGCATCATaGACCTCATCATCTGATGGT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDFSAAS*TSSSDG
Trigger: ACCATCAGATGATGAGGTGCATGATGCTGCGCTGAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCAAGCTGTCAAACACTaGTTTCTGATAGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKQAVKH*FLIDLE
Trigger: TTCCAAATCTATCAGAAAGCAGTGTTTGACAGCTTG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCAAGCTGTCAAACACTaGTTTCTGATAGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQQAVKH*FLIDLE
Trigger: TTCCAAATCTATCAGAAAGCAGTGTTTGACAGCTTG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCACCTGGCCCCGGGATaGAGATTTATCCTTAAATGT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESHLAPG*RFILKC
Trigger: ACATTTAAGGATAAATCTGCATCCCGGGGCCAGGTG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGGTCACAAACCTCATTaGATTACCAACATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLGHKPH*ITNISG
Trigger: CCCCGAGATGTTGGTAATGCAATGAGGTTTGTGACC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTTTATCATAGCAAAGTaGACAGCGCCGAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLFIIAK*TAPKSF
Trigger: GAAAGACTTCGGCGCTGTGCACTTTGCTATGATAAA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATATACAGTGTTTTCTGTaGCACCGTTCTCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDIQCFL*HRSLGW
Trigger: CCAACCCAGAGAACGGTGGCACAGAAAACACTGTAT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGATACAGTGTTTTCTGTaGCACCGTTCTCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKIQCFL*HRSLGW
Trigger: CCAACCCAGAGAACGGTGGCACAGAAAACACTGTAT...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR GCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATATACAGTGTTTTCTGTaGCACCGTTCTCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNIQCFL*HRSLGW
Trigger: CCAACCCAGAGAACGGTGGCACAGAAAACACTGTAT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTACAAGGAGATGTTGTaGCTGGGAATCAAATTCATC +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVYKEML*LGIKFI
Trigger: GATGAATTTGATTCCCAGGCACAACATCTCCTTGTA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTGATGCCTGAACTGTaGAGAGCTTTCAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVLMPEL*RAFKEK
Trigger: CTTTTCTTTGAAAGCTCTGCACAGTTCAGGCATCAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGTATTGTTAGCCCCTTaGATGCTCAAGGCAAACACG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKVLLAP*MLKANT
Trigger: CGTGTTTGCCTTGAGCATCCAAGGGGCTAACAATAC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGTATTGTTAGCCCCTTaGATGCTCAAGGCAAACACG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESVLLAP*MLKANT
Trigger: CGTGTTTGCCTTGAGCATCCAAGGGGCTAACAATAC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGGAAATTGTCTGTTCTaGAGGATAAGACACTATTTC +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQGNCLF*RIRHYF
Trigger: GAAATAGTGTCTTATCCTCCAGAACAGACAATTTCC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTATAACAACCAAAGTTTaGGGGACACCAGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVITTKV*GTPAFL
Trigger: AAGAAATGCTGGTGTCCCCCAAACTTTGGTTGTTAT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGAGAATTGCCTGTTATTaGCAGGAGATGTTCCTTATA +
Preference number: 4 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQRIACY*QEMFLI
Trigger: TATAAGGAACATCTCCTGCCAATAACAGGCAATTCT...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTAGGTCCTGGAATTCCTaGACATTTGCAGAATGTACA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLRSWNS*TFAECT
Trigger: TGTACATTCTGCAAATGTCCAGGAATTCCAGGACCT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGCTGCCCTGAGATCCTaGATCACCTTTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLAALRS*ITFFSF
Trigger: AAAGGAGAAAAAGGTGATCCAGGATCTCAGGGCAGC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCATTTGGGAAAGCTGCTaGAGGAGCTGCTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESIWESC*RSCFFL
Trigger: TAGGAAGAAGCAGCTCCTCCAGCAGCTTTCCCAAAT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAATTTGGGAAAGCTGCTaGAGGAGCTGCTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKIWESC*RSCFFL
Trigger: TAGGAAGAAGCAGCTCCTCCAGCAGCTTTCCCAAAT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCATCTCGGGGCTCTGTaGTGTCTTGATATTTTATTT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVHLGAL*CLDILF
Trigger: AAATAAAATATCAAGACACCACAGAGCCCCGAGATG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTAAAAGCAAAGACTGTTaGACTGATATCCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLKSKDC*TDIQGT
Trigger: AGTGCCCTGGATATCAGTCCAACAGTCTTTGCTTTT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGATCAAGTGGGTAGCTaGCTAACTCCTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKDQVGS*LTPPCH
Trigger: ATGACATGGAGGAGTTAGCCAGCTACCCACTTGATC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGATCAAGTGGGTAGCTaGCTAACTCCTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDDQVGS*LTPPCH
Trigger: ATGACATGGAGGAGTTAGCCAGCTACCCACTTGATC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTCACTTCCTACTCTTTaGGAAGCATCTATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVSLPTL*EASMRK
Trigger: TTTCCTCATAGATGCTTCCCAAAGAGTAGGAAGTGA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCTTTGTCTAAAGAGTTaGTTTCGCCAGCAGATATTA +
Preference number: 4 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRLCLKS*FRQQIL
Trigger: TAATATCTGCTGGCGAAACCAACTCTTTAGACAAAG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGATATAGTTCCAATCTaGCTTGTGGGTTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLDIVPI*LVGSAK
Trigger: CTTGGCCGAACCCACAAGCCAGATTGGAACTATATC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGGATATAGTTCCAATCTaGCTTGTGGGTTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKDIVPI*LVGSAK
Trigger: CTTGGCCGAACCCACAAGCCAGATTGGAACTATATC...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCCTCAAGATTTGAGATaGAGAACAAATTTAGCATGC +
Preference number: 4 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKPQDLR*RTNLAC
Trigger: GCATGCTAAATTTGTTCTCCATCTCAAATCTTGAGG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCCAGAACCGATGACATaGGCATGGCTTTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESPEPMT*AWLSSF
Trigger: AAAACTGGAAAGCCATGCCCATGTCATCGGTTCTGG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCCAGAACCGATGACATaGGCATGGCTTTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLPEPMT*AWLSSF
Trigger: AAAACTGGAAAGCCATGCCCATGTCATCGGTTCTGG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCCAGAACCGATGACATaGGCATGGCTTTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLPEPMT*AWLSSF
Trigger: AAAACTGGAAAGCCATGCCCATGTCATCGGTTCTGG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTCCCAAGAACATCTCTaGTCATATAGAGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVSQEHL*SYRVSV
Trigger: CACAGATACTCTATATGACCAGAGATGTTCTTGGGA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTCACAAGTTTTAATGTaGGTGTCCAGAGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNSQVLM*VSRDAP
Trigger: TGGAGCGTCTCTGGACACTCACATTAAAACTTGTGA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGGAACTGGAATCACCTaGAATGTTCCAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNGTGIT*NVPVLS
Trigger: TGACAACACTGGAACATTTCAGGTGATTCCAGTTCC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGGAACTGGAATCACCTaGAATGTTCCAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESGTGIT*NVPVLS
Trigger: TGACAACACTGGAACATTTCAGGTGATTCCAGTTCC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGGAACTGGAATCACCTaGAATGTTCCAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDGTGIT*NVPVLS
Trigger: TGACAACACTGGAACATTTCAGGTGATTCCAGTTCC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTCAGAACCACTACTATaGTTGTTCCCTAATACAAGG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLSEPLL*LFPNTR
Trigger: CCTTGTATTAGGGAACAATCATAGTAGTGGTTCTGA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATACAATCACTGCTAGATaGAATGTTAGGGTCACCCCA +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDTITAR*NVRVTP
Trigger: TGGGGTGACCCTAACATTTCATCTAGCAGTGATTGT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATCTCCCATTTATGGGTaGAGAGAAGTAGGTCCTATG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKSPIYG*REVGPM
Trigger: CATAGGACCTACTTCTCTGCACCCATAAATGGGAGA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTCTCCCATTTATGGGTaGAGAGAAGTAGGTCCTATG +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLSPIYG*REVGPM
Trigger: CATAGGACCTACTTCTCTGCACCCATAAATGGGAGA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGTGTCATCTGAATACTaGACAACTCCAACTCGGACT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLVSSEY*TTPTRT
Trigger: AGTCCGAGTTGGAGTTGTGCAGTATTCAGATGACAC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGTGTCATCTGAATACTaGACAACTCCAACTCGGACT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESVSSEY*TTPTRT
Trigger: AGTCCGAGTTGGAGTTGTGCAGTATTCAGATGACAC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGTCCCTGCCAACATCTaGTTTCTTCACCAAATGGAT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESVPANI*FLHQMD
Trigger: ATCCATTTGGTGAAGAAAGCAGATGTTGGCAGGGAC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTATTGTTTTTATTCCCTaGCATACCCTCAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVIVFIP*HTLKFL
Trigger: AAGGAACTTGAGGGTATGGCAGGGAATAAAAACAAT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATATGACAGACCTCTGGTaGTTCAGTACACATACGTTC +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNMTDLW*FSTHTF
Trigger: GAACGTATGTGTACTGAAGCACCAGAGGTCTGTCAT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGGTTTTTACTGCATCTaGCACATCATAGCGAGGATC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKGFYCI*HIIARI
Trigger: GATCCTCGCTATGATGTGGCAGATGCAGTAAAAACC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCTTCAGGGTTTTTACTaGATCTGCCACATCATAGCG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESLQGFY*ICHIIA
Trigger: CGCTATGATGTGGCAGATGCAGTAAAAACCCTGAAG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCATAGGACTTCAGCGTaGAAATTGTCTGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDHRTSA*KLSVLE
Trigger: CTCCAGAACAGACAATTTCCACGCTGAAGTCCTATG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTCAAACTGTTTCTCCTaGATGCTGCTTGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSNCFS*MLLEPS
Trigger: TGATGGCTCAAGCAGCATCCAGGAGAAACAGTTTGA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTAAAAGGATGTTAGGTTaGTCAGAGTATTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLKRMLG*SEYLRA
Trigger: AGCCCTCAAATACTCTGACCAACCTAACATCCTTTT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAAAGATGACAGACCTCTaGTGCTTCAGTACACATACG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKKMTDL*CFSTHT
Trigger: CGTATGTGTACTGAAGCACCAGAGGTCTGTCATCTT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATAAGATGACAGACCTCTaGTGCTTCAGTACACATACG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNKMTDL*CFSTHT
Trigger: CGTATGTGTACTGAAGCACCAGAGGTCTGTCATCTT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGGCAAAGTCAATTCTTaGAAATCCACCGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKGKVNS*KSTALG
Trigger: TCCAAGAGCGGTGGATTTCCAAGAATTGACTTTGCC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGTTTTCCCACAGCTCTaGCAGATTTCACGGATGATT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDVFPQL*QISRMI
Trigger: AATCATCCGTGAAATCTGCCAGAGCTGTGGGAAAAC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTTGGCAGGGAATCCTTaGTCACTGTTCACCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESLAGNP*SLFTLN
Trigger: GTTTAAGGTGAACAGTGACCAAGGATTCCCTGCCAA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTGGCAGGGAATCCTTaGTCACTGTTCACCTTAAAC +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDLAGNP*SLFTLN
Trigger: GTTTAAGGTGAACAGTGACCAAGGATTCCCTGCCAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGATAGATTTGGAACTTaGCAGGGAATCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKDRFGT*QGILGH
Trigger: GTGACCAAGGATTCCCTGCCAAGTTCCAAATCTATC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGAGTTATAGGAAACCATaGCAACTCTTGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSYRKP*QLLLPQ
Trigger: CTGTGGGAGCAAGAGTTGCCATGGTTTCCTATAACT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAAGTTATAGGAAACCATaGCAACTCTTGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKSYRKP*QLLLPQ
Trigger: CTGTGGGAGCAAGAGTTGCCATGGTTTCCTATAACT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAGTTATAGGAAACCATaGCAACTCTTGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESSYRKP*QLLLPQ
Trigger: CTGTGGGAGCAAGAGTTGCCATGGTTTCCTATAACT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCATCTCGGGGCTCTGTaGTGTCTTGATATTTTATTT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLHLGAL*CLDILF
Trigger: AAATAAAATATCAAGACACCACAGAGCCCCGAGATG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCCCATTTGGAGGAACTaGAATCACCTGAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESPIWRN*NHLKCS
Trigger: GGAACATTTCAGGTGATTCCAGTTCCTCCAAATGGG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCCCATTTGGAGGAACTaGAATCACCTGAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLPIWRN*NHLKCS
Trigger: GGAACATTTCAGGTGATTCCAGTTCCTCCAAATGGG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGTCCACTGCAAGGCATaGCCAATAAAAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNVHCKA*PIKTSP
Trigger: TGGAGATGTTTTTATTGGCCATGCCTTGCAGTGGAC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGGTCCACTGCAAGGCATaGCCAATAAAAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKVHCKA*PIKTSP
Trigger: TGGAGATGTTTTTATTGGCCATGCCTTGCAGTGGAC...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTGTTTTTCCTCAGATTaGGGGTTCCTACAAAGACAT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLCFSSD*GFLQRH
Trigger: ATGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTAGGAGATGTTGTGCCTaGGAATCAAATTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLRRCCA*ESNSSN
Trigger: GTTTGATGAATTTGATTCCCAGGCACAACATCTCCT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTCGAAGTTCTCAACATaGAAAACTAGGCTGCTATCC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESSKFST*KTRLLS
Trigger: GGATAGCAGCCTAGTTTTTCATGTTGAGAACTTCGA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGGCTCTGTGGTGTCTTaGTATTTTATTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLGSVVS*YFIWES
Trigger: GCTTTCCCAAATAAAATATCAAGACACCACAGAGCC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGGCTCTGTGGTGTCTTaGTATTTTATTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNGSVVS*YFIWES
Trigger: GCTTTCCCAAATAAAATATCAAGACACCACAGAGCC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTTCATGTCCAGAAGTaGGACTTGCAATTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKFHVQK*DLQFLQ
Trigger: CTGCAGAAATTGCAAGTCTCACTTCTGGACATGAAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGTCAGGTCTTCTTACTaGTGTCTTCACTCCGAAAAT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLVRSSY*CLHSEN
Trigger: ATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGAC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGTCAGGTCTTCTTACTaGTGTCTTCACTCCGAAAAT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESVRSSY*CLHSEN
Trigger: ATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGAC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTCAGTCCAAGTCGCATaGAATTTTCCTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLSVQVA*NFPSHP
Trigger: TGGATGTGAAGGAAAATTGCATGCGACTTGGACTGA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGGTAACAGGGAACCTTaGTCATTCTATCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLGNREP*SFYPSF
Trigger: GAATGAAGGATAGAATGAGCAAGGTTCCCTGTTACC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGGTAACAGGGAACCTTaGTCATTCTATCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDGNREP*SFYPSF
Trigger: GAATGAAGGATAGAATGAGCAAGGTTCCCTGTTACC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGTTTCTCAGTTCCAATaGTGTGTCATTGAGCTGATC +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDVSQFQ*CVIELI
Trigger: GATCAGCTCAATGACACAGCATTGGAACTGAGAAAC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTTATCATAGCAAAGTaGACAGCGCCGAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDFIIAK*TAPKSF
Trigger: GAAAGACTTCGGCGCTGTGCACTTTGCTATGATAAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGAAATCCACCGCTCTTaGAGACATTCTGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLEIHRS*RHSEFE
Trigger: CTCAAATTCAGAATGTCTCCAAGAGCGGTGGATTTC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGAAATCCACCGCTCTTaGAGACATTCTGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLEIHRS*RHSEFE
Trigger: CTCAAATTCAGAATGTCTCCAAGAGCGGTGGATTTC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTTGATTTTCCCCATTTaGAGGAACTGGAATCACCTG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLLIFPI*RNWNHL
Trigger: CAGGTGATTCCAGTTCCTCCAAATGGGGAAAATCAA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATTGATTTTCCCCATTTaGAGGAACTGGAATCACCTG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKLIFPI*RNWNHL
Trigger: CAGGTGATTCCAGTTCCTCCAAATGGGGAAAATCAA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTACCCATCTTTCTCCTaGAACTTTCCCAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNYPSFS*NFPKEN
Trigger: ATTCTCCTTGGGAAAGTTCCAGGAGAAAGATGGGTA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTACCCATCTTTCTCCTaGAACTTTCCCAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDYPSFS*NFPKEN
Trigger: ATTCTCCTTGGGAAAGTTCCAGGAGAAAGATGGGTA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCCAGAATTTAATTCTTaGCCAATGAAGCCATTACCT +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLPEFNS*PMKPLP
Trigger: AGGTAATGGCTTCATTGGCCAAGAATTAAATTCTGG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTCTTTGTCTAAAGAGTTaGTTTCGCCAGCAGATATTA +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLLCLKS*FRQQIL
Trigger: TAATATCTGCTGGCGAAACCAACTCTTTAGACAAAG...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGATTATACATGTCAGTaGAGCTATCTTCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLDYTCQ*SYLLFS
Trigger: GGAGAAAAGAAGATAGCTCCACTGACATGTATAATC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCTGGTTAGAACCACATaGGATTATACATGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESLVRTT*DYTCQW
Trigger: CCACTGACATGTATAATCCCATGTGGTTCTAACCAG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGACTAACCCAAGCTGCTaGCTAGAGATCTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKTNPSC*LEIFFF
Trigger: GAAAAAGAAGATCTCTAGCCAGCAGCTTGGGTTAGT...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTTCTCAAGGAAGGTCTaGAGATGCCTTAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLFSRKV*RCLKFP
Trigger: AGGAAATTTAAGGCATCTTCAGACCTTCCTTGAGAA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTTCTTGATTTGCTGCTaGAATTCAGATTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNFLICC*NSDWVV
Trigger: CACAACCCAATCTGAATTTCAGCAGCAAATCAAGAA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTCTTGATTTGCTGCTaGAATTCAGATTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDFLICC*NSDWVV
Trigger: CACAACCCAATCTGAATTTCAGCAGCAAATCAAGAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGTTTTATCACTGAACTaGACAACACCAATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESVLSLN*TTPIWV
Trigger: AACCCAGATTGGTGTTGTTCAGTTCAGTGATAAAAC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCTGATCTCTTCTAGCTaGGATCTATTGGCATTGTAT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLISSS*DLLALY
Trigger: ATACAATGCCAATAGATCTCAGCTAGAAGAGATCAG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCTGATCTCTTCTAGCTaGGATCTATTGGCATTGTAT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLLISSS*DLLALY
Trigger: ATACAATGCCAATAGATCTCAGCTAGAAGAGATCAG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAACTGAGCCTGTCTGATTaGTTTTCAAGCATTATGTTG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKLSLSD*FSSIML
Trigger: CAACATAATGCTTGAAAATCAATCAGACAGGCTCAG...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCTGAGCCTGTCTGATTaGTTTTCAAGCATTATGTTG +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLLSLSD*FSSIML
Trigger: CAACATAATGCTTGAAAATCAATCAGACAGGCTCAG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCTGAGACCACAAAGATaGCCTTGTGTTTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDLRPQR*PCVFLD
Trigger: ATCTAAGAAAACACAAGGTCATCTTTGTGGTCTCAG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGATAATTTTCTCCAGCTaGGACCACAAAGATGACCTT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLIIFSS*DHKDDL
Trigger: AAGGTCATCTTTGTGGTCTCAGCTGGAGAAAATTAT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTTAATTCTTGGCCAATaGAGCCATTACCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLLILGQ*SHYLPK
Trigger: TTTTGGGAGGTAATGGCTTCATTGGCCAAGAATTAA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTAATTCTTGGCCAATaGAGCCATTACCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKLILGQ*SHYLPK
Trigger: TTTTGGGAGGTAATGGCTTCATTGGCCAAGAATTAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR TCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTCAGAACCACTACTATaGTTGTTCCCTAATACAAGG +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKSEPLL*LFPNTR
Trigger: CCTTGTATTAGGGAACAATCATAGTAGTGGTTCTGA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAATACATCATCAAAATTaGTGCCTGAACTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKIHHQN*CLNCAE
Trigger: CTCTGCACAGTTCAGGCATCAATTTTGATGATGTAT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATATACATCATCAAAATTaGTGCCTGAACTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDIHHQN*CLNCAE
Trigger: CTCTGCACAGTTCAGGCATCAATTTTGATGATGTAT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTTCCACCAGTTAGTTaGTTAATGTTAAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLVPPVS*LMLKIA
Trigger: GGCTATTTTTAACATTAAGCAACTAACTGGTGGAAC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTTCTATTTTATTAGCTaGCCCAATGCCAACTGCATG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNFYFIS*PNANCM
Trigger: CATGCAGTTGGCATTGGGGCAGCTAATAAAATAGAA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGAAAGCATCAAAGTTCTaGCCAAAGCTAACCCTTTCT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLKASKF*PKLTLS
Trigger: AGAAAGGGTTAGCTTTGGGCAGAACTTTGATGCTTT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTAAAGCATCAAAGTTCTaGCCAAAGCTAACCCTTTCT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLKASKF*PKLTLS
Trigger: AGAAAGGGTTAGCTTTGGGCAGAACTTTGATGCTTT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTTCAAGCATTATGTTaGTTTCACTCTGGAGACCGT +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDFQALC*FHSGDR
Trigger: ACGGTCTCCAGAGTGAAAGCAACATAATGCTTGAAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATTGTCAATTGTCCACTaGAAGGCATGGCCAATAAAA +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKLSIVH*KAWPIK
Trigger: TTTTATTGGCCATGCCTTGCAGTGGACAATTGACAA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTGTCAATTGTCCACTaGAAGGCATGGCCAATAAAA +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKLSIVH*KAWPIK
Trigger: TTTTATTGGCCATGCCTTGCAGTGGACAATTGACAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR GCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTACAAGGAGATGTTGTaGCTGGGAATCAAATTCATC +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKYKEML*LGIKFI
Trigger: GATGAATTTGATTCCCAGGCACAACATCTCCTTGTA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTGATGCCTGAACTGTaGAGAGCTTTCAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDLMPEL*RAFKEK
Trigger: CTTTTCTTTGAAAGCTCTGCACAGTTCAGGCATCAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGATAACTAACCCAAGCTaGTGGCTAGAGATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKITNPS*WLEIFF
Trigger: AAAGAAGATCTCTAGCCAGCAGCTTGGGTTAGTTAT...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCTTTCTGACAGGATATaGGGAAGTGAACTTGCATAT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLLSDRI*GSELAY
Trigger: ATATGCAAGTTCACTTCCCCATATCCTGTCAGAAAG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTACTATTTCTTCTAACTaGGTATTGTTAGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLTISSN*VLLAPW
Trigger: CCAAGGGGCTAACAATACCCAGTTAGAAGAAATAGT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGATCCTTTTACAATCATaGAGAGCACACACACGAAAG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLILLQS*RAHTRK
Trigger: CTTTCGTGTGTGTGCTCTCCATGATTGTAAAAGGAT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCATCCTTTTACAATCATaGAGAGCACACACACGAAAG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESILLQS*RAHTRK
Trigger: CTTTCGTGTGTGTGCTCTCCATGATTGTAAAAGGAT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGCTTTCTTCACCAAATaGATAGTTAGGTTAATCATG +
Preference number: 4 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLAFFTK*IVRLIM
Trigger: CATGATTAACCTAACTATCCATTTGGTGAAGAAAGC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAATAACAACCAAAGTTTaGGGGACACCAGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKITTKV*GTPAFL
Trigger: AAGAAATGCTGGTGTCCCCCAAACTTTGGTTGTTAT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCATCTCGGGGCTCTGTaGTGTCTTGATATTTTATTT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNHLGAL*CLDILF
Trigger: AAATAAAATATCAAGACACCACAGAGCCCCGAGATG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTCACTTCCTACTCTTTaGGAAGCATCTATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLSLPTL*EASMRK
Trigger: TTTCCTCATAGATGCTTCCCAAAGAGTAGGAAGTGA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTCACTTCCTACTCTTTaGGAAGCATCTATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKSLPTL*EASMRK
Trigger: TTTCCTCATAGATGCTTCCCAAAGAGTAGGAAGTGA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTGTTTTTCCTCAGATTaGGGGTTCCTACAAAGACAT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNCFSSD*GFLQRH
Trigger: ATGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTGTTTTTCCTCAGATTaGGGGTTCCTACAAAGACAT +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKCFSSD*GFLQRH
Trigger: ATGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGCACGTCTGATTAAATaGACAAATGGCTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLARLIK*TNGLTN
Trigger: GTTTGTCAAGCCATTTGTCCATTTAATCAGACGTGC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGGCACGTCTGATTAAATaGACAAATGGCTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKARLIK*TNGLTN
Trigger: GTTTGTCAAGCCATTTGTCCATTTAATCAGACGTGC...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGCACGTCTGATTAAATaGACAAATGGCTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLARLIK*TNGLTN
Trigger: GTTTGTCAAGCCATTTGTCCATTTAATCAGACGTGC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAAGGAGATGTTGTGCCTaGGAATCAAATTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKRRCCA*ESNSSN
Trigger: GTTTGATGAATTTGATTCCCAGGCACAACATCTCCT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGAGGAGATGTTGTGCCTaGGAATCAAATTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKRRCCA*ESNSSN
Trigger: GTTTGATGAATTTGATTCCCAGGCACAACATCTCCT...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTCCCAAGAACATCTCTaGTCATATAGAGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESSQEHL*SYRVSV
Trigger: CACAGATACTCTATATGACCAGAGATGTTCTTGGGA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTCCCAAGAACATCTCTaGTCATATAGAGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDSQEHL*SYRVSV
Trigger: CACAGATACTCTATATGACCAGAGATGTTCTTGGGA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCATGGTTACAAAATCTaGATTAGATACCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDHGYKI*IRYPVR
Trigger: TCTGACAGGGTATCTAATTCAGATTTTGTAACCATG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTTCTCTGAGCCTGTCTaGTTGATTTTCAAGCATTAT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLFSEPV*LIFKHY
Trigger: ATAATGCTTGAAAATCAATCAGACAGGCTCAGAGAA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATTCTCTGAGCCTGTCTaGTTGATTTTCAAGCATTAT +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKFSEPV*LIFKHY
Trigger: ATAATGCTTGAAAATCAATCAGACAGGCTCAGAGAA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR TCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTTGGATATGCATTTTTaGAAAGACTATGTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESLDMHF*KDYVPA
Trigger: TGCGGGAACATAGTCTTTTCAAAAATGCATATCCAA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265379.10
CDS-3UTR TCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATAGTCTTTCTAATGTTTaGTTTTCCCCATTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDSLSNV*FSPFGG
Trigger: TCCTCCAAATGGGGAAAATCAAACATTAGAAAGACT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATAGTCTTTCTAATGTTTaGTTTTCCCCATTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNSLSNV*FSPFGG
Trigger: TCCTCCAAATGGGGAAAATCAAACATTAGAAAGACT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGAGTCTTTCTAATGTTTaGTTTTCCCCATTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSLSNV*FSPFGG
Trigger: TCCTCCAAATGGGGAAAATCAAACATTAGAAAGACT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTTGTCAATGTCCTGGTaGAGAGAAAGCATTAACTAT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLSMSW*RESINY
Trigger: ATAGTTAATGCTTTCTCTTCACCAGGACATTGACAA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR TCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGCAAAGTACAACTCAGTaGTTCTCAGTCATTAAGCTT +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKQSTTQ*FSVIKL
Trigger: AAGCTTAATGACTGAGAATCACTGAGTTGTACTTTG...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGATGACAATCAGCATCTaGTTCACATTTTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLMTISI*FTFCLM
Trigger: CATCAAGCAAAATGTGAAGCAGATGCTGATTGTCAT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAATGACAATCAGCATCTaGTTCACATTTTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKMTISI*FTFCLM
Trigger: CATCAAGCAAAATGTGAAGCAGATGCTGATTGTCAT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGATTGTTTTTATTCCCTaGCATACCCTCAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLIVFIP*HTLKFL
Trigger: AAGGAACTTGAGGGTATGGCAGGGAATAAAAACAAT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTATAAACATCTCCTATaGCCAAAACCAGGACACAAA +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLYKHLL*PKPGHK
Trigger: TTTGTGTCCTGGTTTTGGGCATAGGAGATGTTTATA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATATAAACATCTCCTATaGCCAAAACCAGGACACAAA +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKYKHLL*PKPGHK
Trigger: TTTGTGTCCTGGTTTTGGGCATAGGAGATGTTTATA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTCCAGAAGTGAGACTTaGAATTTCTGCAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESSRSET*NFCRFL
Trigger: CAAAAATCTGCAGAAATTGCAAGTCTCACTTCTGGA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTCCAGAAGTGAGACTTaGAATTTCTGCAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDSRSET*NFCRFL
Trigger: CAAAAATCTGCAGAAATTGCAAGTCTCACTTCTGGA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR GCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTCCAGAAGTGAGACTTaGAATTTCTGCAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKSRSET*NFCRFL
Trigger: CAAAAATCTGCAGAAATTGCAAGTCTCACTTCTGGA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR GCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTAGCAGATATAACTTCTaGATCAAATCAGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLSRYNF*IKSVAV
Trigger: GACAGCTACTGATTTGATGCAGAAGTTATATCTGCT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGAGCAGATATAACTTCTaGATCAAATCAGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSRYNF*IKSVAV
Trigger: GACAGCTACTGATTTGATGCAGAAGTTATATCTGCT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGAGCAGATATAACTTCTaGATCAAATCAGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKSRYNF*IKSVAV
Trigger: GACAGCTACTGATTTGATGCAGAAGTTATATCTGCT...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGGAAATTGTCTGTTCTaGAGGATAAGACACTATTTC +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLGNCLF*RIRHYF
Trigger: GAAATAGTGTCTTATCCTCCAGAACAGACAATTTCC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATAGAATTGCCTGTTATTaGCAGGAGATGTTCCTTATA +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNRIACY*QEMFLI
Trigger: TATAAGGAACATCTCCTGCCAATAACAGGCAATTCT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCCAGAATTTAATTCTTaGCCAATGAAGCCATTACCT +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLPEFNS*PMKPLP
Trigger: AGGTAATGGCTTCATTGGCCAAGAATTAAATTCTGG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGCCAGAATTTAATTCTTaGCCAATGAAGCCATTACCT +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKPEFNS*PMKPLP
Trigger: AGGTAATGGCTTCATTGGCCAAGAATTAAATTCTGG...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCCAGAATTTAATTCTTaGCCAATGAAGCCATTACCT +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNPEFNS*PMKPLP
Trigger: AGGTAATGGCTTCATTGGCCAAGAATTAAATTCTGG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCTCAAACATTTGGCTTaGAAGGTAAACCAAATAGTC +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLLKHLA*KVNQIV
Trigger: GACTATTTGGTTTACCTTCCAAGCCAAATGTTTGAG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCTCAAACATTTGGCTTaGAAGGTAAACCAAATAGTC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLLKHLA*KVNQIV
Trigger: GACTATTTGGTTTACCTTCCAAGCCAAATGTTTGAG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGCTCAAACATTTGGCTTaGAAGGTAAACCAAATAGTC +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKLKHLA*KVNQIV
Trigger: GACTATTTGGTTTACCTTCCAAGCCAAATGTTTGAG...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCTCAAACATTTGGCTTaGAAGGTAAACCAAATAGTC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESLKHLA*KVNQIV
Trigger: GACTATTTGGTTTACCTTCCAAGCCAAATGTTTGAG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAACTTTGTCTAAAGAGTTaGTTTCGCCAGCAGATATTA +
Preference number: 4 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKLCLKS*FRQQIL
Trigger: TAATATCTGCTGGCGAAACCAACTCTTTAGACAAAG...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGCTTTGTCTAAAGAGTTaGTTTCGCCAGCAGATATTA +
Preference number: 4 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKLCLKS*FRQQIL
Trigger: TAATATCTGCTGGCGAAACCAACTCTTTAGACAAAG...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CCA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCCTCAAGATTTGAGATaGAGAACAAATTTAGCATGC +
Preference number: 4 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESPQDLR*RTNLAC
Trigger: GCATGCTAAATTTGTTCTCCATCTCAAATCTTGAGG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CCA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCCTCAAGATTTGAGATaGAGAACAAATTTAGCATGC +
Preference number: 4 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLPQDLR*RTNLAC
Trigger: GCATGCTAAATTTGTTCTCCATCTCAAATCTTGAGG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR GCA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGTTCCACCAGTTAGTTaGTTAATGTTAAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: MENKFSMLLANCFCEKSLVPPVS*LMLKIA
Trigger: GGCTATTTTTAACATTAAGCAACTAACTGGTGGAAC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CCA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGCTTTCTTCACCAAATaGATAGTTAGGTTAATCATG +
Preference number: 4 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNAFFTK*IVRLIM
Trigger: CATGATTAACCTAACTATCCATTTGGTGAAGAAAGC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 90 bp CCTGAGCGCAGTAAACGCGCGCCTCTCGGGCGCCCGCGGCGCAGTTaGATAGAGCGCGCGCCGGAAGCCCTGGTCCGCGCCGCACGCCCT +
Preference number: 5 (lower is better)
Translates to: PERSKRAPLGRPRRS*IERAPEALVRAARP
Trigger: AGGGCGTGCGGCGCGGACCAGGGCTTCCGGCGCGCGCTCTATCCAACTGCGCCGCGGGCGCCCGAGAGGCGCGCGTTTACTGCGCTCAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp GGAAGCCCTGGTCCGCGCCGCACGCCCTGGTCCGCGCCGCACAGCTaGAGGTGGATTCCCGCAGCGAACGCCTCGTGCCCTGAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: GSPGPRRTPWSAPHS*RWIPAANASCPERV
Trigger: GACCCTCTCAGGGCACGAGGCGTTCGCTGCGGGAATCCACCTGCAGCTGTGCGGCGCGGACCAGGGCGTGCGGCGCGGACCAGGGCTTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 90 bp TTGGATAGAGCGCGCGCCGGAAGCCCTGGTCCGCGCCGCACGCCCTaGTCCGCGCCGCACAGCTGCAGGTGGATTCCCGCAGCGAACGCC +
Preference number: 5 (lower is better)
Translates to: LDRARAGSPGPRRTP*SAPHSCRWIPAANA
Trigger: GGCGTTCGCTGCGGGAATCCACCTGCAGCTGTGCGGCGCGGACCAGGGCGTGCGGCGCGGACCAGGGCTTCCGGCGCGCGCTCTATCCAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp GACACTCCGGACCCTGGAAACCGCCCCCAACTCTCCAGAAGAGGCTaGACCGAGCTCCTGAGCGCAGTAAACGCGCGCCTCTCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: DTPDPGNRPQLSRRG*TELLSAVNARLSGA
Trigger: GGCGCCCGAGAGGCGCGCGTTTACTGCGCTCAGGAGCTCGGTGCAGCCTCTTCTGGAGAGTTGGGGGCGGTTTCCAGGGTCCGGAGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGCGCCCGCGGCGCAGTaGGATAGAGCGCGCGCCGGA +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKAPAAQ*DRARAG
Trigger: TCCGGCGCGCGCTCTATCCAACTGCGCCGCGGGCGC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 90 bp GGTTCAGCGCAGCATCATGCACCTCATCATCTGATGGTCTGTGGGTaGCCAGAACTGCAATCTGAGGCACTCCTTGTGCTCTTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GSAQHHAPHHLMVCG*PELQSEALLVLFCC
Trigger: GCAGCAGAAGAGCACAAGGAGTGCCTCAGATTGCAGTTCTGGTCACCCACAGACCATCAGATGATGAGGTGCATGATGCTGCGCTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 90 bp ATCCTCCAGTCGAAGGTTCAGCGCAGCATCATGCACCTCATCATCTaGTGGTCTGTGGGTGACCAGAACTGCAATCTGAGGCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: ILQSKVQRSIMHLII*WSVGDQNCNLRHSL
Trigger: CAAGGAGTGCCTCAGATTGCAGTTCTGGTCACCCACAGACCATCAGATGATGAGGTGCATGATGCTGCGCTGAACCTTCGACTGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp GACGCTCCAGCTGTTTGCTGGCTTTGTTTCAGAGAAGCCGCCGGCTaGCAAATGAACTTAGGGAGTCAGAATTTCTCAGAAACCAAGGGC +
Preference number: 5 (lower is better)
Translates to: DAPAVCWLCFREAAG*QMNLGSQNFSETKG
Trigger: GCCCTTGGTTTCTGAGAAATTCTGACTCCCTAAGTTCATTTGGCAGCCGGCGGCTTCTCTGAAACAAAGCCAGCAAACAGCTGGAGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp ATTTTGCTTGATGCGGCTGCCATGTTCCTCTGTAAACAGGGCATTTaGGTGCTTGAGAGCCTTGGCAGTGTAGGTGTTCCCTCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: ILLDAAAMFLCKQGI*VLESLGSVGVPSSV
Trigger: GACACTGGAGGGAACACCTACACTGCCAAGGCTCTCAAGCACGCAAATGCCCTGTTTACAGAGGAACATGGCAGCCGCATCAAGCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 90 bp GCTGCTGGAGGAGCTGCTTCTTCCTATTGTAGTCAGACCAGCGGATaGGATAGCTGGTGCCTGAGTTATAGGAAACCATGGCAACTCTTG +
Preference number: 5 (lower is better)
Translates to: AAGGAASSYCSQTSG*DSWCLSYRKPWQLL
Trigger: CAAGAGTTGCCATGGTTTCCTATAACTCAGGCACCAGCTATCTCATCCGCTGGTCTGACTACAATAGGAAGAAGCAGCTCCTCCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS GCA 90 bp GCAAACACGTTTACATCCTCCAGTCGAAGGTTCAGCGCAGCATCATaGACCTCATCATCTGATGGTCTGTGGGTGACCAGAACTGCAATC +
Preference number: 5 (lower is better)
Translates to: ANTFTSSSRRFSAAS*TSSSDGLWVTRTAI
Trigger: GATTGCAGTTCTGGTCACCCACAGACCATCAGATGATGAGGTGCATGATGCTGCGCTGAACCTTCGACTGGAGGATGTAAACGTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 90 bp AAAACACAGCAACTCTCCTCACGTTGGCTCCTGCATACGTCCGCTTaGACACGTTGCGGGTCACAAACCTCATTGCATTACCAACATCTC +
Preference number: 5 (lower is better)
Translates to: KTQQLSSRWLLHTSA*TRCGSQTSLHYQHL
Trigger: GAGATGTTGGTAATGCAATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTGCTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS GCA 90 bp CTTGTAGTCCTCGGGTCCCATGAGGTCCTGGAATTCCTGGACATTTaGAGAATGTACAGCAGCAAGTCCTCTCTGCAATATTTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: LVVLGSHEVLEFLDI*RMYSSKSSLQYFPG
Trigger: ACCTGGGAAATATTGCAGAGAGGACTTGCTGCTGTACATTCTGCAAATGTCCAGGAATTCCAGGACCTCATGGGACCCGAGGACTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGCAACTCTCCTCACGTaGGCTCCTGCATACGTCCGC +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRATLLT*APAYVR
Trigger: GCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTGC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 90 bp TCCTTAAATGTGTCCCAAAGAGACCGCAAGAACTGTGCGTTCAGATaGGTTGGCCCACTGACGTTGACTTGCAGCAAGCTGTCAAACACT +
Preference number: 5 (lower is better)
Translates to: SLNVSQRDRKNCAFR*VGPLTLTCSKLSNT
Trigger: AGTGTTTGACAGCTTGCTGCAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCACAGTTCTTGCGGTCTCTTTGGGACACATTTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 90 bp CTTCTTCCTATTGTAGTCAGACCAGCGGATGAGATAGCTGGTGCCTaGGTTATAGGAAACCATGGCAACTCTTGCTCCCACAGGACAGTT +
Preference number: 5 (lower is better)
Translates to: LLPIVVRPADEIAGA*VIGNHGNSCSHRTV
Trigger: AACTGTCCTGTGGGAGCAAGAGTTGCCATGGTTTCCTATAACTCAGGCACCAGCTATCTCATCCGCTGGTCTGACTACAATAGGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CCA 90 bp AAATGTGTCCCAAAGAGACCGCAAGAACTGTGCGTTCAGATGAGTTaGCCCACTGACGTTGACTTGCAGCAAGCTGTCAAACACTGCTTT +
Preference number: 5 (lower is better)
Translates to: KCVPKRPQELCVQMS*PTDVDLQQAVKHCF
Trigger: AAAGCAGTGTTTGACAGCTTGCTGCAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCACAGTTCTTGCGGTCTCTTTGGGACACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 90 bp TGCGGGTCACAAACCTCATTGCATTACCAACATCTCGGGGCTCTGTaGTGTCTTGATATTTTATTTGGGAAAGCTGCTGGAGGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: CGSQTSLHYQHLGAL*CLDILFGKAAGGAA
Trigger: AGCAGCTCCTCCAGCAGCTTTCCCAAATAAAATATCAAGACACCACAGAGCCCCGAGATGTTGGTAATGCAATGAGGTTTGTGACCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCCTGCATACGTCCGCTaGAACACGTTGCGGGTCACA +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRPAYVR*NTLRVT
Trigger: TGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGCAACTCTCCTCACGTaGGCTCCTGCATACGTCCGC +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVATLLT*APAYVR
Trigger: GCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTGC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 90 bp GCTCTTCTGCTGCCATATGACTCTGAGAAGCCGTCTCTTCTCATCTaGTCAATGGCAGCCCCTGTATTGGATTTCCCAACTTGGATAGAA +
Preference number: 5 (lower is better)
Translates to: ALLLPYDSEKPSLLI*SMAAPVLDFPTWIE
Trigger: TTCTATCCAAGTTGGGAAATCCAATACAGGGGCTGCCATTGATCAGATGAGAAGAGACGGCTTCTCAGAGTCATATGGCAGCAGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp TGCCATACCCTCAAGTTCCTTTTGGTTGGCCTTTCCTACACCCACTaGAAAGATGGTGATGCCTTTGTTTCTCAGTTCCAATGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: CHTLKFLLVGLSYTH*KDGDAFVSQFQCCV
Trigger: GACACAGCATTGGAACTGAGAAACAAAGGCATCACCATCTTTGCAGTGGGTGTAGGAAAGGCCAACCAAAAGGAACTTGAGGGTATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp ATGAGTTGGCCCACTGACGTTGACTTGCAGCAAGCTGTCAAACACTaGTTTCTGATAGATTTGGAACTTGGCAGGGAATCCTTGGTCACT +
Preference number: 5 (lower is better)
Translates to: MSWPTDVDLQQAVKH*FLIDLELGRESLVT
Trigger: AGTGACCAAGGATTCCCTGCCAAGTTCCAAATCTATCAGAAAGCAGTGTTTGACAGCTTGCTGCAAGTCAACGTCAGTGGGCCAACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp TGCAGATTTATCCTTAAATGTGTCCCAAAGAGACCGCAAGAACTGTaGGTTCAGATGAGTTGGCCCACTGACGTTGACTTGCAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: CRFILKCVPKRPQEL*VQMSWPTDVDLQQA
Trigger: AGCTTGCTGCAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCACAGTTCTTGCGGTCTCTTTGGGACACATTTAAGGATAAATCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp TCCTGCATACGTCCGCTTGAACACGTTGCGGGTCACAAACCTCATTaGATTACCAACATCTCGGGGCTCTGTGGTGTCTTGATATTTTAT +
Preference number: 5 (lower is better)
Translates to: SCIRPLEHVAGHKPH*ITNISGLCGVLIFY
Trigger: ATAAAATATCAAGACACCACAGAGCCCCGAGATGTTGGTAATGCAATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGAGGATGAGAAATTTTTaGGCCCCCAAACGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRRMRNF*APKRAP
Trigger: GGGGGCCCGTTTGGGGGCCAAAAAATTTCTCATCCT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGTTGGCCCACTGACGTaGACTTGCAGCAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRVGPLT*TCSKLS
Trigger: TGACAGCTTGCTGCAAGTCAACGTCAGTGGGCCAAC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGGAACTAGGACTGCCTaGCACCCCTTTCTGTCCACT +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRGTRTA*HPFLST
Trigger: AGTGGACAGAAAGGGGTGCAAGGCAGTCCTAGTTCC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGGAACTAGGACTGCCTaGCACCCCTTTCTGTCCACT +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKGTRTA*HPFLST
Trigger: AGTGGACAGAAAGGGGTGCAAGGCAGTCCTAGTTCC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGTGGGTTCGGCCAAGTaGGACCAAGTGATGATCCAG +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRVGSAK*DQVMIQ
Trigger: CTGGATCATCACTTGGTCCAACTTGGCCGAACCCAC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGTGGGTTCGGCCAAGTaGGACCAAGTGATGATCCAG +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKVGSAK*DQVMIQ
Trigger: CTGGATCATCACTTGGTCCAACTTGGCCGAACCCAC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 90 bp TTTTCCTTCACATCCATGGAGCTGGTAATGTTCTCAAGGAAGGTCTaGAGATGCCTTAAATTTCCTCCGGTCCCAAGTGACTCATCCACC +
Preference number: 5 (lower is better)
Translates to: FSFTSMELVMFSRKV*RCLKFPPVPSDSST
Trigger: GGTGGATGAGTCACTTGGGACCGGAGGAAATTTAAGGCATCTTCAGACCTTCCTTGAGAACATTACCAGCTCCATGGATGTGAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp GCCCAAAACCAGGACACAAATTCCAAGGTCCTTCAGGGTTTTTACTaGATCTGCCACATCATAGCGAGGATCTCCAGATGTGATAACAAC +
Preference number: 5 (lower is better)
Translates to: AQNQDTNSKVLQGFY*ICHIIARISRCDNN
Trigger: GTTGTTATCACATCTGGAGATCCTCGCTATGATGTGGCAGATGCAGTAAAAACCCTGAAGGACCTTGGAATTTGTGTCCTGGTTTTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAGGATGAGAAATTTTTaGGCCCCCAAACGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVRMRNF*APKRAP
Trigger: GGGGGCCCGTTTGGGGGCCAAAAAATTTCTCATCCT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCCACAGCTCACCCCCTaGATAGAGCTGATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQPQLTP*IELMSS
Trigger: AGAAGACATCAGCTCTATCAAGGGGGTGAGCTGTGG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGTCCGCTTGAACACGTaGCGGGTCACAAACCTCATT +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRVRLNT*RVTNLI
Trigger: AATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGAC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCCACCGTTCTCTGGGTaGGGAGAGGTCATGTTAACA +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRPPFSG*GEVMLT
Trigger: TGTTAACATGACCTCTCCCAACCCAGAGAACGGTGG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 90 bp CAGGTTCCACGACTCTGTCTGTGGACATCCCATCAGTCAACACAATaGGGTAACAGGGAACCTTGCTCATTCTATCCTTCATTCCATTTT +
Preference number: 5 (lower is better)
Translates to: QVPRLCLWTSHQSTQ*GNREPCSFYPSFHF
Trigger: AAAATGGAATGAAGGATAGAATGAGCAAGGTTCCCTGTTACCTCATTGTGTTGACTGATGGGATGTCCACAGACAGAGTCGTGGAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 90 bp ACAAACCTCATTGCATTACCAACATCTCGGGGCTCTGTGGTGTCTTaGTATTTTATTTGGGAAAGCTGCTGGAGGAGCTGCTTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: TNLIALPTSRGSVVS*YFIWESCWRSCFFL
Trigger: TAGGAAGAAGCAGCTCCTCCAGCAGCTTTCCCAAATAAAATATCAAGACACCACAGAGCCCCGAGATGTTGGTAATGCAATGAGGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CCA 90 bp CTGATATTTTCTGAAGAGACTCAGATTGGCTTCAGGGAGCAGGGCTaGCCAAATATAACTAACCCAAGCTGCTGGCTAGAGATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LIFSEETQIGFREQG*PNITNPSCWLEIFF
Trigger: AAAGAAGATCTCTAGCCAGCAGCTTGGGTTAGTTATATTTGGCCAGCCCTGCTCCCTGAAGCCAATCTGAGTCTCTTCAGAAAATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGAGACGCTCCAGCTGTTaGCTGGCTTTGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQRRSSC*LALFQR
Trigger: TCTCTGAAACAAAGCCAGCAAACAGCTGGAGCGTCT...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGAGACGCTCCAGCTGTTaGCTGGCTTTGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKRRSSC*LALFQR
Trigger: TCTCTGAAACAAAGCCAGCAAACAGCTGGAGCGTCT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGGTATTGTTAGCCCCTaGGATGCTCAAGGCAAACAC +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRGIVSP*DAQGKH
Trigger: GTGTTTGCCTTGAGCATCCAAGGGGCTAACAATACC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGTGCTTCACATTTTGCTaGATGCGGCTGCCATGTTCC +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRCFTFC*MRLPCS
Trigger: GGAACATGGCAGCCGCATCAAGCAAAATGTGAAGCA...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCATCTGCTTCACATTTaGCTTGATGCGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRHLLHI*LDAAAM
Trigger: CATGGCAGCCGCATCAAGCAAAATGTGAAGCAGATG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGACCCTCAAGTTCCTTTaGGTTGGCCTTTCCTACACC +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKTLKFL*VGLSYT
Trigger: GGTGTAGGAAAGGCCAACCAAAAGGAACTTGAGGGT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGGGCAAAGTCAATTCTaGGAAATCCACCGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRGQSQF*EIHRSW
Trigger: CCAAGAGCGGTGGATTTCCAAGAATTGACTTTGCCC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCCCACTGACGTTGACTaGCAGCAAGCTGTCAAACAC +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVPTDVD*QQAVKH
Trigger: GTGTTTGACAGCTTGCTGCAAGTCAACGTCAGTGGG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGGGTCACAAACCTCATaGCATTACCAACATCTCGGG +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQGSQTS*HYQHLG
Trigger: CCCGAGATGTTGGTAATGCAATGAGGTTTGTGACCC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGTCCGCTTGAACACGTaGCGGGTCACAAACCTCATT +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVVRLNT*RVTNLI
Trigger: AATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGAC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGAAGCTGTATCAGGTGTaGATCAAGTGGGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRKLYQV*IKWVAG
Trigger: GCCAGCTACCCACTTGATCAACACCTGATACAGCTT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCCACCGTTCTCTGGGTaGGGAGAGGTCATGTTAACA +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVPPFSG*GEVMLT
Trigger: TGTTAACATGACCTCTCCCAACCCAGAGAACGGTGG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 90 bp ATTTCTTGCAGTTCTATTTTATTAGCTGCCCCAATGCCAACTGCATaGACAGTGATTTGCTCAGCCCTTAGTCTCTTAGCAGGTTCCACG +
Preference number: 5 (lower is better)
Translates to: ISCSSILLAAPMPTA*TVICSALSLLAGST
Trigger: CGTGGAACCTGCTAAGAGACTAAGGGCTGAGCAAATCACTGTTCATGCAGTTGGCATTGGGGCAGCTAATAAAATAGAACTGCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 90 bp AACCAGGACACAAATTCCAAGGTCCTTCAGGGTTTTTACTGCATCTaGCACATCATAGCGAGGATCTCCAGATGTGATAACAACCAAAGT +
Preference number: 5 (lower is better)
Translates to: NQDTNSKVLQGFYCI*HIIARISRCDNNQS
Trigger: ACTTTGGTTGTTATCACATCTGGAGATCCTCGCTATGATGTGGCAGATGCAGTAAAAACCCTGAAGGACCTTGGAATTTGTGTCCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTATGGGGAAGTGAACTaGCATATCAGCATCGACGGC +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVYGEVN*HISIDG
Trigger: GCCGTCGATGCTGATATGCAAGTTCACTTCCCCATA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTCTTCTAACTGGGTATaGTTAGCCCCTTGGATGCTC +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQSSNWV*LAPWML
Trigger: GAGCATCCAAGGGGCTAACAATACCCAGTTAGAAGA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTACTCCAACTCGGACTTaGTCTGGGCCAATGCTAAAC +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVTPTRT*SGPMLN
Trigger: GTTTAGCATTGGCCCAGACAAAGTCCGAGTTGGAGT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTCAAGTTCCTTTTGGTaGGCCTTTCCTACACCCACT +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQSSSFW*AFPTPT
Trigger: AGTGGGTGTAGGAAAGGCCAACCAAAAGGAACTTGA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTACCCTCAAGTTCCTTTaGGTTGGCCTTTCCTACACC +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVTLKFL*VGLSYT
Trigger: GGTGTAGGAAAGGCCAACCAAAAGGAACTTGAGGGT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGAGTCCCCTAAATCCTTaGGGTCCAGGTCCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSPLNP*GPGPPG
Trigger: TCCTGGGGGACCTGGACCCAAAGGATTTAGGGGACT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTAGTCCCCTAAATCCTTaGGGTCCAGGTCCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLSPLNP*GPGPPG
Trigger: TCCTGGGGGACCTGGACCCAAAGGATTTAGGGGACT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGGGTCACAAACCTCATaGCATTACCAACATCTCGGG +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVGSQTS*HYQHLG
Trigger: CCCGAGATGTTGGTAATGCAATGAGGTTTGTGACCC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCCTGCATACGTCCGCTaGAACACGTTGCGGGTCACA +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNPAYVR*NTLRVT
Trigger: TGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCCTGCATACGTCCGCTaGAACACGTTGCGGGTCACA +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLPAYVR*NTLRVT
Trigger: TGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGCAAAGACATTGTCAATaGTCCACTGCAAGGCATGGC +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRQRHCQ*STARHG
Trigger: GCCATGCCTTGCAGTGGACAATTGACAATGTCTTTG...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGCAAAGACATTGTCAATaGTCCACTGCAAGGCATGGC +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKQRHCQ*STARHG
Trigger: GCCATGCCTTGCAGTGGACAATTGACAATGTCTTTG...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CCA 90 bp TCAAACTGTTTCTCCTGGATGCTGCTTGAGCCATCAATGAGGAAGTaGATATCAGCCTCTTTTGTATCCACACAGCCAGTTTTATCAAGA +
Preference number: 5 (lower is better)
Translates to: SNCFSWMLLEPSMRK*ISASFVSTQPVLSR
Trigger: TCTTGATAAAACTGGCTGTGTGGATACAAAAGAGGCTGATATCCACTTCCTCATTGATGGCTCAAGCAGCATCCAGGAGAAACAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 90 bp GTCACTTCCAACATAAATCTCTTGATTTGCTCAAACTGTTTCTCCTaGATGCTGCTTGAGCCATCAATGAGGAAGTGGATATCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: VTSNINLLICSNCFS*MLLEPSMRKWISAS
Trigger: AGAGGCTGATATCCACTTCCTCATTGATGGCTCAAGCAGCATCCAGGAGAAACAGTTTGAGCAAATCAAGAGATTTATGTTGGAAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATAGCTGTTTGCTGGCTTaGTTTCAGAGAAGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDSCLLA*FQRSRR
Trigger: CCGGCGGCTTCTCTGAAACAAAGCCAGCAAACAGCT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATAGCTGTTTGCTGGCTTaGTTTCAGAGAAGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNSCLLA*FQRSRR
Trigger: CCGGCGGCTTCTCTGAAACAAAGCCAGCAAACAGCT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTATGGCAGCCCCTGTATaGGATTTCCCAACTTGGATA +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVMAAPV*DFPTWI
Trigger: TATCCAAGTTGGGAAATCCAATACAGGGGCTGCCAT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGACTTCAGCGTGGAAATaGTCTGTTCTGGAGGATAAG +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRTSAWK*SVLEDK
Trigger: CTTATCCTCCAGAACAGACAATTTCCACGCTGAAGT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGGATATCAGCCTCTTTaGTATCCACACAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKGYQPL*YPHSQF
Trigger: AAACTGGCTGTGTGGATACAAAAGAGGCTGATATCC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGGATATCAGCCTCTTTaGTATCCACACAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQGYQPL*YPHSQF
Trigger: AAACTGGCTGTGTGGATACAAAAGAGGCTGATATCC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGATAACAACCAAAGTTaGGGGGACACCAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRDNNQS*GDTSIS
Trigger: AGAAATGCTGGTGTCCCCCAAACTTTGGTTGTTATC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGATGTCCATAAAGCAATaGGTTTTCCCACAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQMSIKQ*VFPQLW
Trigger: CCAGAGCTGTGGGAAAACCAATTGCTTTATGGACAT...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGTTGGCCCACTGACGTaGACTTGCAGCAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLVGPLT*TCSKLS
Trigger: TGACAGCTTGCTGCAAGTCAACGTCAGTGGGCCAAC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGAATCCCTTTGTCTCCTaGGGGTCCTGTGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLNPFVS*GSCVSS
Trigger: CGAGGAGACACAGGACCCCAAGGAGACAAAGGGATT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAAATCCCTTTGTCTCCTaGGGGTCCTGTGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKNPFVS*GSCVSS
Trigger: CGAGGAGACACAGGACCCCAAGGAGACAAAGGGATT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCATCCTGCAATCCCTTaGTCTCCTTGGGGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLHPAIP*SPWGPV
Trigger: CACAGGACCCCAAGGAGACAAAGGGATTGCAGGATG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCATCCTGCAATCCCTTaGTCTCCTTGGGGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLHPAIP*SPWGPV
Trigger: CACAGGACCCCAAGGAGACAAAGGGATTGCAGGATG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAAACCATGGCAACTCTaGCTCCCACAGGACAGTTAT +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVKPWQL*LPQDSY
Trigger: ATAACTGTCCTGTGGGAGCAAGAGTTGCCATGGTTT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGGGTCTGAAGCAATGTaGAAGTTGTCAATCACTGAG +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRGSEAM*KLSITE
Trigger: CTCAGTGATTGACAACTTCAACATTGCTTCAGACCC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGAAATATGACGTAGCCTaGACACTTAGCCCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRKYDVA*TLSPQS
Trigger: GCTTTGAGGGCTAAGTGTCAAGGCTACGTCATATTT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGATCTCCATTGAGCTGTaGAGAGTCTTGGAGATGATG +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRISIEL*RVLEMM
Trigger: CATCATCTCCAAGACTCTCAACAGCTCAATGGAGAT...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGGTGGGTTCGGCCAAGTaGGACCAAGTGATGATCCAG +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKVGSAK*DQVMIQ
Trigger: CTGGATCATCACTTGGTCCAACTTGGCCGAACCCAC...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGTGGGTTCGGCCAAGTaGGACCAAGTGATGATCCAG +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKVGSAK*DQVMIQ
Trigger: CTGGATCATCACTTGGTCCAACTTGGCCGAACCCAC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 90 bp GATGATCGAAGTTCTCAACATGAAAAACTAGGCTGCTATCCCCACTaGTCTCTTCTAGCTGAGATCTATTGGCATTGTATACTCCTACAG +
Preference number: 5 (lower is better)
Translates to: DDRSSQHEKLGCYPH*SLLAEIYWHCILLQ
Trigger: CTGTAGGAGTATACAATGCCAATAGATCTCAGCTAGAAGAGATCAGTGGGGATAGCAGCCTAGTTTTTCATGTTGAGAACTTCGATCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTATGGCAGCCCCTGTATaGGATTTCCCAACTTGGATA +
Preference number: 5 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLMAAPV*DFPTWI
Trigger: TATCCAAGTTGGGAAATCCAATACAGGGGCTGCCAT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGAAAAGGATGTTAGGTaGGTCAGAGTATTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVEKDVR*VRVFEG
Trigger: GCCCTCAAATACTCTGACCAACCTAACATCCTTTTC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGAAGATGGTGATGCCTTaGTTTCTCAGTTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKKMVMP*FLSSNA
Trigger: AGCATTGGAACTGAGAAACAAAGGCATCACCATCTT...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCCACAGCTCACCCCCTaGATAGAGCTGATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNPQLTP*IELMSS
Trigger: AGAAGACATCAGCTCTATCAAGGGGGTGAGCTGTGG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTGCTTTCTGATAGATTaGGAACTTGGCAGGGAATCC +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVCFLID*ELGRES
Trigger: GGATTCCCTGCCAAGTTCCAAATCTATCAGAAAGCA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCCCACTGACGTTGACTaGCAGCAAGCTGTCAAACAC +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNPTDVD*QQAVKH
Trigger: GTGTTTGACAGCTTGCTGCAAGTCAACGTCAGTGGG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCGCTGCCTTTCAGACCTaGAGAACCCTTCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESAAFQT*RTLHGL
Trigger: CAAGCCATGAAGGGTTCTCAAGGTCTGAAAGGCAGC...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGCTGCCTTTCAGACCTaGAGAACCCTTCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDAAFQT*RTLHGL
Trigger: CAAGCCATGAAGGGTTCTCAAGGTCTGAAAGGCAGC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTCTACCTTGTCTTCCTaGTTCTCCTTTGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLSTLSS*FSFGAL
Trigger: AAGGGCTCCAAAGGAGAACAAGGAAGACAAGGTAGA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGTCCGCTTGAACACGTaGCGGGTCACAAACCTCATT +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNVRLNT*RVTNLI
Trigger: AATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGAC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGTGGCTCAAACATTaGGCTTGGAAGGTAAACCAA +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQLWLKH*AWKVNQ
Trigger: TTGGTTTACCTTCCAAGCCAAATGTTTGAGCCACAA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGATCACTTCCTACTCTTaGGGAAGCATCTATGAGGAA +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQITSYS*GSIYEE
Trigger: TTCCTCATAGATGCTTCCCAAAGAGTAGGAAGTGAT...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGAGCTGTTGAGAGTCTaGGAGATGATGTTTCATTTG +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKELLRV*EMMFHL
Trigger: CAAATGAAACATCATCTCCAAGACTCTCAACAGCTC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGAGCTGTTGAGAGTCTaGGAGATGATGTTTCATTTG +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQELLRV*EMMFHL
Trigger: CAAATGAAACATCATCTCCAAGACTCTCAACAGCTC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGAGCTGTTGAGAGTCTaGGAGATGATGTTTCATTTG +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRELLRV*EMMFHL
Trigger: CAAATGAAACATCATCTCCAAGACTCTCAACAGCTC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGGTTCCTACAAAGACATaGTCAATTGTCCACTGCAAG +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQVPTKT*SIVHCK
Trigger: CTTGCAGTGGACAATTGACAATGTCTTTGTAGGAAC...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGTTCCTACAAAGACATaGTCAATTGTCCACTGCAAG +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRVPTKT*SIVHCK
Trigger: CTTGCAGTGGACAATTGACAATGTCTTTGTAGGAAC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAAATATGGAGTAGCCTaGACACTTGGCTCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVKYGVA*TLGSQR
Trigger: TCTCTGAGAGCCAAGTGTCAAGGCTACTCCATATTT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGTCGGTGGGATATTTGTaGATGGCACGTCTGATTAAA +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRSVGYL*MARLIK
Trigger: TTTAATCAGACGTGCCATCAACAAATATCCCACCGA...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCCACCGTTCTCTGGGTaGGGAGAGGTCATGTTAACA +
Preference number: 5 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESPPFSG*GEVMLT
Trigger: TGTTAACATGACCTCTCCCAACCCAGAGAACGGTGG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGCCACCGTTCTCTGGGTaGGGAGAGGTCATGTTAACA +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKPPFSG*GEVMLT
Trigger: TGTTAACATGACCTCTCCCAACCCAGAGAACGGTGG...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS GCA 90 bp AGACTACATCCATGTATGAATCTTCAGGTAAGAAAGCCTCTCGAATaGAAGCATTTGGAAAACATTTATCATAGCAAAGTGCACAGCGCC +
Preference number: 5 (lower is better)
Translates to: RLHPCMNLQVRKPLE*KHLENIYHSKVHSA
Trigger: GGCGCTGTGCACTTTGCTATGATAAATGTTTTCCAAATGCTTGCATTCGAGAGGCTTTCTTACCTGAAGATTCATACATGGATGTAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTATGGGGAAGTGAACTaGCATATCAGCATCGACGGC +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNYGEVN*HISIDG
Trigger: GCCGTCGATGCTGATATGCAAGTTCACTTCCCCATA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGGTATTGTTAGCCCCTaGGATGCTCAAGGCAAACAC +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDGIVSP*DAQGKH
Trigger: GTGTTTGCCTTGAGCATCCAAGGGGCTAACAATACC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATACTCCAACTCGGACTTaGTCTGGGCCAATGCTAAAC +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDTPTRT*SGPMLN
Trigger: GTTTAGCATTGGCCCAGACAAAGTCCGAGTTGGAGT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATGCTTCACATTTTGCTaGATGCGGCTGCCATGTTCC +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKCFTFC*MRLPCS
Trigger: GGAACATGGCAGCCGCATCAAGCAAAATGTGAAGCA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCATCTGCTTCACATTTaGCTTGATGCGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDHLLHI*LDAAAM
Trigger: CATGGCAGCCGCATCAAGCAAAATGTGAAGCAGATG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTAAGATGGTGATGCCTTaGTTTCTCAGTTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVKMVMP*FLSSNA
Trigger: AGCATTGGAACTGAGAAACAAAGGCATCACCATCTT...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGGAGACATTCTGAATTaGAGTCTTCCACTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVGDILN*SLPLGF
Trigger: AAAACCCAGTGGAAGACTCAAATTCAGAATGTCTCC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGGGCAAAGTCAATTCTaGGAAATCCACCGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLGQSQF*EIHRSW
Trigger: CCAAGAGCGGTGGATTTCCAAGAATTGACTTTGCCC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGATAACAACCAAAGTTaGGGGGACACCAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLDNNQS*GDTSIS
Trigger: AGAAATGCTGGTGTCCCCCAAACTTTGGTTGTTATC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGTTTGATGTTATTGTTTaGTCCTGGATTACCCGGATC +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKFDVIV*SWITRI
Trigger: GATCCGGGTAATCCAGGACAAAACAATAACATCAAA...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTCCTTTGGAGCCCTTTaGTCCTTTGATGTTATTGTT +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQSFGAL*SFDVIV
Trigger: AACAATAACATCAAAGGACAAAAGGGCTCCAAAGGA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCCCGGATCAGATCACATaGAGAATATACAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESPDQIT*RIYRLP
Trigger: GGGCAGCCTGTATATTCTCAATGTGATCTGATCCGG...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTCCGGATCAGATCACATaGAGAATATACAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLPDQIT*RIYRLP
Trigger: GGGCAGCCTGTATATTCTCAATGTGATCTGATCCGG...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCTGATGTTAAGGTCATaGACAATGGAAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQLMLRS*TMEVMM
Trigger: CATCATCACTTCCATTGTCAATGACCTTAACATCAG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGGGTCACAAACCTCATaGCATTACCAACATCTCGGG +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKGSQTS*HYQHLG
Trigger: CCCGAGATGTTGGTAATGCAATGAGGTTTGTGACCC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGCTATATTCCGAGAATaGTCTATGAGGAAGACTACA +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKAIFRE*SMRKTT
Trigger: TGTAGTCTTCCTCATAGACAATTCTCGGAATATAGC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTAAGCTGTATCAGGTGTaGATCAAGTGGGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLKLYQV*IKWVAG
Trigger: GCCAGCTACCCACTTGATCAACACCTGATACAGCTT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTTCTCTCCTCCTAAATaGATGAGTCTACAGGCATCC +
Preference number: 5 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLFSPPK*MSLQAS
Trigger: GGATGCCTGTAGACTCATCAATTTAGGAGGAGAGAA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTGTGGCTCAAACATTaGGCTTGGAAGGTAAACCAA +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVLWLKH*AWKVNQ
Trigger: TTGGTTTACCTTCCAAGCCAAATGTTTGAGCCACAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTGTTTTTCCTCAGATaGGGGGTTCCTACAAAGACA +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVLFFLR*GVPTKT
Trigger: TGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGTCTCCTATGATGACCTaGTATCTTCACCATGTTCTA +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLRSPMMT*YLHHVL
Trigger: TAGAACATGGTGAAGATACAAGGTCATCATAGGAGA...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTCTCCTATGATGACCTaGTATCTTCACCATGTTCTA +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQSPMMT*YLHHVL
Trigger: TAGAACATGGTGAAGATACAAGGTCATCATAGGAGA...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp CAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTCAGGGAAATCATTCCTGGTTaGTCAGGTCTTCTTACTGAT +
Preference number: 5 (lower is better)
Translates to: QSFQRKVNSYRSVSPVLREIIPG*SGLLTD
Trigger: ATCAGTAAGAAGACCTGACAAACCAGGAATGATTTC...CCTGAGAACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 90 bp ATCATTAGAATAGTCAGTGATATAAAATTCCACTTCTGTGTCATCTaGATACTGCACAACTCCAACTCGGACTTTGTCTGGGCCAATGCT +
Preference number: 5 (lower is better)
Translates to: IIRIVSDIKFHFCVI*ILHNSNSDFVWANA
Trigger: AGCATTGGCCCAGACAAAGTCCGAGTTGGAGTTGTGCAGTATTCAGATGACACAGAAGTGGAATTTTATATCACTGACTATTCTAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GAACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGCATAAATCTCTTGATTaGCTCAAACTGTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: ELCRAFKEKLTLIGRFPQHKSLD*LKLFLL
Trigger: CAGGAGAAACAGTTTGAGCAAATCAAGAGATTTATG...CTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GGTTTGTCAGGTCTTCTTACTGATGTCTTCACTCCGAAAATTCTTCTCCTCAAGGTAGTTGCTTCCAAATaGAGCCATACCAATTTTCAT +
Preference number: 5 (lower is better)
Translates to: GLSGLLTDVFTPKILLLKVVASK*SHTNFH
Trigger: ATGAAAATTGGTATGGCTCAATTTGGAAGCAACTAC...CTTGAGGAGAAGAATTTTCGGAGTGAAGACATCAGTAAGAAGACCTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGGAGACATTCTGAATTaGAGTCTTCCACTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLGDILN*SLPLGF
Trigger: AAAACCCAGTGGAAGACTCAAATTCAGAATGTCTCC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTCTACCTTGTCTTCCTaGTTCTCCTTTGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESSTLSS*FSFGAL
Trigger: AAGGGCTCCAAAGGAGAACAAGGAAGACAAGGTAGA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTCTGATGTTAAGGTCATaGACAATGGAAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVLMLRS*TMEVMM
Trigger: CATCATCACTTCCATTGTCAATGACCTTAACATCAG...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAAAACCATGGCAACTCTaGCTCCCACAGGACAGTTAT +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKKPWQL*LPQDSY
Trigger: ATAACTGTCCTGTGGGAGCAAGAGTTGCCATGGTTT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATAAACCATGGCAACTCTaGCTCCCACAGGACAGTTAT +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDKPWQL*LPQDSY
Trigger: ATAACTGTCCTGTGGGAGCAAGAGTTGCCATGGTTT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGGGCTCTGTGGTGTCTaGATATTTTATTTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLGLCGV*IFYLGK
Trigger: CTTTCCCAAATAAAATATCAAGACACCACAGAGCCC...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTGCTCAAACATTTGGCTaGGAAGGTAAACCAAATAGT +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVAQTFG*EGKPNS
Trigger: ACTATTTGGTTTACCTTCCAAGCCAAATGTTTGAGC...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGCAAAGACATTGTCAATaGTCCACTGCAAGGCATGGC +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKQRHCQ*STARHG
Trigger: GCCATGCCTTGCAGTGGACAATTGACAATGTCTTTG...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGCAAAGACATTGTCAATaGTCCACTGCAAGGCATGGC +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLQRHCQ*STARHG
Trigger: GCCATGCCTTGCAGTGGACAATTGACAATGTCTTTG...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTCCTTAAGACGTCTTaGTCTAAAGAGTTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVFLKTS*SKELVS
Trigger: CGAAACCAACTCTTTAGACAAAGACGTCTTAAGGAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTCGGTGGGATATTTGTaGATGGCACGTCTGATTAAA +
Preference number: 5 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLSVGYL*MARLIK
Trigger: TTTAATCAGACGTGCCATCAACAAATATCCCACCGA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCACTTCAGCGTGGAAATaGTCTGTTCTGGAGGATAAG +
Preference number: 5 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESTSAWK*SVLEDK
Trigger: CTTATCCTCCAGAACAGACAATTTCCACGCTGAAGT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAAAGATGGTCACATCTTaGCCCCGAAGAATTCTAGCA +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKKMVTS*PRRILA
Trigger: TGCTAGAATTCTTCGGGGCAAAGATGTGACCATCTT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTAAGATGGTCACATCTTaGCCCCGAAGAATTCTAGCA +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLKMVTS*PRRILA
Trigger: TGCTAGAATTCTTCGGGGCAAAGATGTGACCATCTT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGAAAAGGATGTTAGGTaGGTCAGAGTATTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDEKDVR*VRVFEG
Trigger: GCCCTCAAATACTCTGACCAACCTAACATCCTTTTC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTGCTTTCTGATAGATTaGGAACTTGGCAGGGAATCC +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLCFLID*ELGRES
Trigger: GGATTCCCTGCCAAGTTCCAAATCTATCAGAAAGCA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTTGTCCTTTGATGTTATaGTTTTGTCCTGGATTACCC +
Preference number: 5 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLCPLML*FCPGLP
Trigger: GGGTAATCCAGGACAAAACAATAACATCAAAGGACA...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGGGTCTGAAGCAATGTaGAAGTTGTCAATCACTGAG +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLGSEAM*KLSITE
Trigger: CTCAGTGATTGACAACTTCAACATTGCTTCAGACCC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGGGTCTGAAGCAATGTaGAAGTTGTCAATCACTGAG +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNGSEAM*KLSITE
Trigger: CTCAGTGATTGACAACTTCAACATTGCTTCAGACCC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAAATATGACGTAGCCTaGACACTTAGCCCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESKYDVA*TLSPQS
Trigger: GCTTTGAGGGCTAAGTGTCAAGGCTACGTCATATTT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATAAATATGACGTAGCCTaGACACTTAGCCCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNKYDVA*TLSPQS
Trigger: GCTTTGAGGGCTAAGTGTCAAGGCTACGTCATATTT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTTCTCTCCTCCTAAATaGATGAGTCTACAGGCATCC +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLFSPPK*MSLQAS
Trigger: GGATGCCTGTAGACTCATCAATTTAGGAGGAGAGAA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTCTCTCCTCCTAAATaGATGAGTCTACAGGCATCC +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDFSPPK*MSLQAS
Trigger: GGATGCCTGTAGACTCATCAATTTAGGAGGAGAGAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTCTCTCCTCCTAAATaGATGAGTCTACAGGCATCC +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKFSPPK*MSLQAS
Trigger: GGATGCCTGTAGACTCATCAATTTAGGAGGAGAGAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAATCTCCATTGAGCTGTaGAGAGTCTTGGAGATGATG +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKISIEL*RVLEMM
Trigger: CATCATCTCCAAGACTCTCAACAGCTCAATGGAGAT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGATCTCCATTGAGCTGTaGAGAGTCTTGGAGATGATG +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKISIEL*RVLEMM
Trigger: CATCATCTCCAAGACTCTCAACAGCTCAATGGAGAT...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATATCTCCATTGAGCTGTaGAGAGTCTTGGAGATGATG +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDISIEL*RVLEMM
Trigger: CATCATCTCCAAGACTCTCAACAGCTCAATGGAGAT...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGAAATATGGAGTAGCCTaGACACTTGGCTCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKKYGVA*TLGSQR
Trigger: TCTCTGAGAGCCAAGTGTCAAGGCTACTCCATATTT...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATAAATATGGAGTAGCCTaGACACTTGGCTCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNKYGVA*TLGSQR
Trigger: TCTCTGAGAGCCAAGTGTCAAGGCTACTCCATATTT...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTCTAATTCTTTGTCATaGTGTTTAGGGCCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVSNSLS*CLGPKE
Trigger: TTCCTTTGGCCCTAAACACAATGACAAAGAATTAGA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTCTTCGGTGGGATATTaGTTGATGGCACGTCTGATT +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSSVGY*LMARLI
Trigger: AATCAGACGTGCCATCAACAAATATCCCACCGAAGA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTCTTCGGTGGGATATTaGTTGATGGCACGTCTGATT +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDSSVGY*LMARLI
Trigger: AATCAGACGTGCCATCAACAAATATCCCACCGAAGA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTCTTCGGTGGGATATTaGTTGATGGCACGTCTGATT +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKSSVGY*LMARLI
Trigger: AATCAGACGTGCCATCAACAAATATCCCACCGAAGA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ACTGTGCAGAGCTTTCAAAGAAAAGTTAACTCTTATAGGTCGGTTTCCCCAGTTTTGCCAGTTTCTCAGTaGAAAAGAGCAGATATAACT +
Preference number: 5 (lower is better)
Translates to: TVQSFQRKVNSYRSVSPVLPVSQ*KRADIT
Trigger: AGTTATATCTGCTCTTTTCAACTGAGAAACTGGCAA...AACTGGGGAAACCGACCTATAAGAGTTAACTTTTCTTTGAAAGCTCTGCACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATCAGAATTGCCTGTTATaGGCAGGAGATGTTCCTTAT +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDQNCLL*AGDVPY
Trigger: ATAAGGAACATCTCCTGCCAATAACAGGCAATTCTG...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTTTTCAAGCATTATGTaGCTTTCACTCTGGAGACCG +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDFSSIM*LSLWRP
Trigger: CGGTCTCCAGAGTGAAAGCAACATAATGCTTGAAAA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTTTTCAAGCATTATGTaGCTTTCACTCTGGAGACCG +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLFSSIM*LSLWRP
Trigger: CGGTCTCCAGAGTGAAAGCAACATAATGCTTGAAAA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGGGCTCTGTGGTGTCTaGATATTTTATTTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLGLCGV*IFYLGK
Trigger: CTTTCCCAAATAAAATATCAAGACACCACAGAGCCC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATGGGCTCTGTGGTGTCTaGATATTTTATTTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDGLCGV*IFYLGK
Trigger: CTTTCCCAAATAAAATATCAAGACACCACAGAGCCC...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTGTGGCTCAAACATTaGGCTTGGAAGGTAAACCAA +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKLWLKH*AWKVNQ
Trigger: TTGGTTTACCTTCCAAGCCAAATGTTTGAGCCACAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAATTGTGGCTCAAACATTaGGCTTGGAAGGTAAACCAA +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKLWLKH*AWKVNQ
Trigger: TTGGTTTACCTTCCAAGCCAAATGTTTGAGCCACAA...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCATCACTTCCTACTCTTaGGGAAGCATCTATGAGGAA +
Preference number: 5 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESITSYS*GSIYEE
Trigger: TTCCTCATAGATGCTTCCCAAAGAGTAGGAAGTGAT...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGATCACTTCCTACTCTTaGGGAAGCATCTATGAGGAA +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKITSYS*GSIYEE
Trigger: TTCCTCATAGATGCTTCCCAAAGAGTAGGAAGTGAT...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAATCACTTCCTACTCTTaGGGAAGCATCTATGAGGAA +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKITSYS*GSIYEE
Trigger: TTCCTCATAGATGCTTCCCAAAGAGTAGGAAGTGAT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGGAGCTGTTGAGAGTCTaGGAGATGATGTTTCATTTG +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKELLRV*EMMFHL
Trigger: CAAATGAAACATCATCTCCAAGACTCTCAACAGCTC...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGGTTCCTACAAAGACATaGTCAATTGTCCACTGCAAG +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKVPTKT*SIVHCK
Trigger: CTTGCAGTGGACAATTGACAATGTCTTTGTAGGAAC...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTTGTTTTTCCTCAGATaGGGGGTTCCTACAAAGACA +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLLFFLR*GVPTKT
Trigger: TGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACAA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTTGTTTTTCCTCAGATaGGGGGTTCCTACAAAGACA +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLLFFLR*GVPTKT
Trigger: TGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACAA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTGTTTTTCCTCAGATaGGGGGTTCCTACAAAGACA +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKLFFLR*GVPTKT
Trigger: TGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTCGGTGGGATATTTGTaGATGGCACGTCTGATTAAA +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSVGYL*MARLIK
Trigger: TTTAATCAGACGTGCCATCAACAAATATCCCACCGA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTCGGTGGGATATTTGTaGATGGCACGTCTGATTAAA +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKSVGYL*MARLIK
Trigger: TTTAATCAGACGTGCCATCAACAAATATCCCACCGA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ACATGGGATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTAAATGTGCTTTTTCCTaGTCTTTCATTGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: TWDYTCQWSYLLFSYDDLKCAFS*SFIASF
Trigger: GAAACTGGCAATGAAAGACAAGGAAAAAGCACATTT...AAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAATCCCATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 90 bp GTAATATTCTTGAAGAGAGACATCTCCAGGTTCATAAGTATGATCTaGTTCTTCTTTTCTGCCATAATTTTCATGTCCAGAAGTGAGACT +
Preference number: 5 (lower is better)
Translates to: VIFLKRDISRFISMI*FFFSAIIFMSRSET
Trigger: AGTCTCACTTCTGGACATGAAAATTATGGCAGAAAAGAAGAACCAGATCATACTTATGAACCTGGAGATGTCTCTCTTCAAGAATATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
ENST00000512836.5
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTTTGATGTTATTGTTTaGTCCTGGATTACCCGGATC +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNFDVIV*SWITRI
Trigger: GATCCGGGTAATCCAGGACAAAACAATAACATCAAA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AATTGTTTTTGTGAAAAGTCCCTGTCATTTACCACAGTACCTCTAACAGATGATTGTCCTTTGATGTTATaGTTTTGTCCTGGATTACCC +
Preference number: 5 (lower is better)
Translates to: NCFCEKSLSFTTVPLTDDCPLML*FCPGLP
Trigger: GGGTAATCCAGGACAAAACAATAACATCAAAGGACA...ATCATCTGTTAGAGGTACTGTGGTAAATGACAGGGACTTTTCACAAAAACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAGAGCCCTTTTGTCCTTaGATGTTATTGTTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKEPFCP*MLLFCP
Trigger: AGGACAAAACAATAACATCAAAGGACAAAAGGGCTC...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTCCTTTGGAGCCCTTTaGTCCTTTGATGTTATTGTT +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLSFGAL*SFDVIV
Trigger: AACAATAACATCAAAGGACAAAAGGGCTCCAAAGGA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGTTGGATATGCATTTTaGAAAAGACTATGTTCCCGC +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLVGYAF*KRLCSR
Trigger: GCGGGAACATAGTCTTTTCAAAAATGCATATCCAAC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265379.10
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCTGATGTTAAGGTCATaGACAATGGAAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLMLRS*TMEVMM
Trigger: CATCATCACTTCCATTGTCAATGACCTTAACATCAG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGCTATATTCCGAGAATaGTCTATGAGGAAGACTACA +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNAIFRE*SMRKTT
Trigger: TGTAGTCTTCCTCATAGACAATTCTCGGAATATAGC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTGCTCAAACATTTGGCTaGGAAGGTAAACCAAATAGT +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLAQTFG*EGKPNS
Trigger: ACTATTTGGTTTACCTTCCAAGCCAAATGTTTGAGC...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGGCTCAAACATTTGGCTaGGAAGGTAAACCAAATAGT +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKAQTFG*EGKPNS
Trigger: ACTATTTGGTTTACCTTCCAAGCCAAATGTTTGAGC...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGCTCAAACATTTGGCTaGGAAGGTAAACCAAATAGT +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNAQTFG*EGKPNS
Trigger: ACTATTTGGTTTACCTTCCAAGCCAAATGTTTGAGC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTCTTTGTCTAAAGAGTaGGTTTCGCCAGCAGATATT +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNSLSKE*VSPADI
Trigger: AATATCTGCTGGCGAAACCAACTCTTTAGACAAAGA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTCTTTGTCTAAAGAGTaGGTTTCGCCAGCAGATATT +
Preference number: 5 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESSLSKE*VSPADI
Trigger: AATATCTGCTGGCGAAACCAACTCTTTAGACAAAGA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTCTTTGTCTAAAGAGTaGGTTTCGCCAGCAGATATT +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKSLSKE*VSPADI
Trigger: AATATCTGCTGGCGAAACCAACTCTTTAGACAAAGA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTTCCTTAAGACGTCTTaGTCTAAAGAGTTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLFLKTS*SKELVS
Trigger: CGAAACCAACTCTTTAGACAAAGACGTCTTAAGGAA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp TTAGTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCTTCCTTAAGACGTCTTaGTCTAAAGAGTTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: LVEDIPRKFQFQMLLEESFLKTS*SKELVS
Trigger: CGAAACCAACTCTTTAGACAAAGACGTCTTAAGGAA...GGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTCCTTAAGACGTCTTaGTCTAAAGAGTTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKFLKTS*SKELVS
Trigger: CGAAACCAACTCTTTAGACAAAGACGTCTTAAGGAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGAAATCATTCCTGGTTaGTCAGGTCTTCTTACTGAT +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNEIIPG*SGLLTD
Trigger: ATCAGTAAGAAGACCTGACAAACCAGGAATGATTTC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGCGCATAGTGTGTACTTaGAGCTTTATATGCATCATC +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKRIVCT*SFICII
Trigger: GATGATGCATATAAAGCTCAAAGTACACACTATGCG...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATCATAAATCTCTTGATTaGCTCAAACTGTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNHKSLD*LKLFLL
Trigger: CAGGAGAAACAGTTTGAGCAAATCAAGAGATTTATG...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGTTAAAGTGCCTTCATaGATGAGAGACATTCTATCT +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLVKVPS*MRDILS
Trigger: AGATAGAATGTCTCTCATCAATGAAGGCACTTTAAC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATGTTAAAGTGCCTTCATaGATGAGAGACATTCTATCT +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNVKVPS*MRDILS
Trigger: AGATAGAATGTCTCTCATCAATGAAGGCACTTTAAC...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTAGTACACATACGTTCTaGAACAAGTGTGAAAACATC +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLSTHTF*NKCENI
Trigger: GATGTTTTCACACTTGTTCAAGAACGTATGTGTACT...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGAGTACACATACGTTCTaGAACAAGTGTGAAAACATC +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSTHTF*NKCENI
Trigger: GATGTTTTCACACTTGTTCAAGAACGTATGTGTACT...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGGTAGTTGCTTCCAAATaGAGCCATACCAATTTTCAT +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLVVASK*SHTNFH
Trigger: ATGAAAATTGGTATGGCTCAATTTGGAAGCAACTAC...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp ATTATACATGTCAGTGGAGCTATCTTCTTTTCTCCTATGATGACCTTGTATCTTTCTAATTCTTTGTCATaGTGTTTAGGGCCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: IIHVSGAIFFSPMMTLYLSNSLS*CLGPKE
Trigger: TTCCTTTGGCCCTAAACACAATGACAAAGAATTAGA...AAGATACAAGGTCATCATAGGAGAAAAGAAGATAGCTCCACTGACATGTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTCTAATTCTTTGTCATaGTGTTTAGGGCCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKSNSLS*CLGPKE
Trigger: TTCCTTTGGCCCTAAACACAATGACAAAGAATTAGA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTCTAATTCTTTGTCATaGTGTTTAGGGCCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNSNSLS*CLGPKE
Trigger: TTCCTTTGGCCCTAAACACAATGACAAAGAATTAGA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS-3UTR CAA 90 bp GTAGAAGATATTCCTAGGAAATTCCAATTCCAAATGCTTTTAGAGGAGTCCAATTTGCCAGTTTCTCAGTaGAAAAGAGCAGATATAACT +
Preference number: 5 (lower is better)
Translates to: VEDIPRKFQFQMLLEESNLPVSQ*KRADIT
Trigger: AGTTATATCTGCTCTTTTCAACTGAGAAACTGGCAA...ATTGGACTCCTCTAAAAGCATTTGGAATTGGAATTTCCTAGGAATATCTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGTTGCCAGTTTCTCAGTaGAAAAGAGCAGATATAACT +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKLPVSQ*KRADIT
Trigger: AGTTATATCTGCTCTTTTCAACTGAGAAACTGGCAA...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATCTCTGGTCATATAGAGTATCTGTGCTTTTCCGTAATTCTTTTGCTGCAAAAAAAATGTGCTTTTTCCTaGTCTTTCATTGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: ISGHIEYLCFSVILLLQKKCAFS*SFIASF
Trigger: GAAACTGGCAATGAAAGACAAGGAAAAAGCACATTT...TTTTTGCAGCAAAAGAATTACGGAAAAGCACAGATACTCTATATGACCAGAGAT
36% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS-3UTR CAA 90 bp AAAGTACAACTCAGTGATTCTCAGTCATTAAGCTTTCATGAGTGCAAGAAAAAGAAATGTGCTTTTTCCTaGTCTTTCATTGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: KVQLSDSQSLSFHECKKKKCAFS*SFIASF
Trigger: GAAACTGGCAATGAAAGACAAGGAAAAAGCACATTT...CTTTTTCTTGCACTCATGAAAGCTTAATGACTGAGAATCACTGAGTTGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS-3UTR CAA 90 bp ATGGAGAACAAATTTAGCATGCTATTAGCCAATTGTTTTTGTGAAAAGTCCCTGTCTCCTATGATGACCTaGTATCTTCACCATAATACA +
Preference number: 5 (lower is better)
Translates to: MENKFSMLLANCFCEKSLSPMMT*YLHHNT
Trigger: TGTATTATGGTGAAGATACAAGGTCATCATAGGAGA...CAGGGACTTTTCACAAAAACAATTGGCTAATAGCATGCTAAATTTGTTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512836.5
CDS CCA 72 bp GCGCGCGCCGGAAGCCCTGGTCCGCGCCGCACGCCCTaGTCCGCGCCGCACAGCTGCAGGTGGATTCCCGCA +
Preference number: 6 (lower is better)
Translates to: ARAGSPGPRRTP*SAPHSCRWIPA
Trigger: TGCGGGAATCCACCTGCAGCTGTGCGGCGCGGACCAGGGCGTGCGGCGCGGACCAGGGCTTCCGGCGCGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp GGTCCGCGCCGCACGCCCTGGTCCGCGCCGCACAGCTaGAGGTGGATTCCCGCAGCGAACGCCTCGTGCCCT +
Preference number: 6 (lower is better)
Translates to: GPRRTPWSAPHS*RWIPAANASCP
Trigger: AGGGCACGAGGCGTTCGCTGCGGGAATCCACCTGCAGCTGTGCGGCGCGGACCAGGGCGTGCGGCGCGGACC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 72 bp AGTAAACGCGCGCCTCTCGGGCGCCCGCGGCGCAGTTaGATAGAGCGCGCGCCGGAAGCCCTGGTCCGCGCC +
Preference number: 6 (lower is better)
Translates to: SKRAPLGRPRRS*IERAPEALVRA
Trigger: GGCGCGGACCAGGGCTTCCGGCGCGCGCTCTATCCAACTGCGCCGCGGGCGCCCGAGAGGCGCGCGTTTACT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 72 bp CGCCGCACGCCCTGGTCCGCGCCGCACAGCTGCAGGTaGATTCCCGCAGCGAACGCCTCGTGCCCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: RRTPWSAPHSCR*IPAANASCPER
Trigger: CCTCTCAGGGCACGAGGCGTTCGCTGCGGGAATCCACCTGCAGCTGTGCGGCGCGGACCAGGGCGTGCGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp GACCCTGGAAACCGCCCCCAACTCTCCAGAAGAGGCTaGACCGAGCTCCTGAGCGCAGTAAACGCGCGCCTC +
Preference number: 6 (lower is better)
Translates to: DPGNRPQLSRRG*TELLSAVNARL
Trigger: GAGGCGCGCGTTTACTGCGCTCAGGAGCTCGGTGCAGCCTCTTCTGGAGAGTTGGGGGCGGTTTCCAGGGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp ATGCCAGAATCTCCCTGTCTTCCTCGCTGCCCAGTTTaGCCCACTGGCCCTAGATCTCCAGGAAGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: MPESPCLPRCPV*PTGPRSPGSPG
Trigger: GCCTGGACTTCCTGGAGATCTAGGGCCAGTGGGGCAAACTGGGCAGCGAGGAAGACAGGGAGATTCTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 72 bp CACGCCCCTGGACATCCTGCAATCCCTTTGTCTCCTTaGGGTCCTGTGTCTCCTCGTACTCCAGGGTTTCCA +
Preference number: 6 (lower is better)
Translates to: HAPGHPAIPLSP*GPVSPRTPGFP
Trigger: TGGAAACCCTGGAGTACGAGGAGACACAGGACCCCAAGGAGACAAAGGGATTGCAGGATGTCCAGGGGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 72 bp GCCCTTTACTCCTTTTCGTCCCATCTGACCGTAGCCTaGGATGCCAGAATCTCCCTGTCTTCCTCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: ALYSFSSHLTVA*DARISLSSSLP
Trigger: GGGCAGCGAGGAAGACAGGGAGATTCTGGCATCCCAGGCTACGGTCAGATGGGACGAAAAGGAGTAAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp GATGCGGCTGCCATGTTCCTCTGTAAACAGGGCATTTaGGTGCTTGAGAGCCTTGGCAGTGTAGGTGTTCCC +
Preference number: 6 (lower is better)
Translates to: DAAAMFLCKQGI*VLESLGSVGVP
Trigger: GGGAACACCTACACTGCCAAGGCTCTCAAGCACGCAAATGCCCTGTTTACAGAGGAACATGGCAGCCGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp GCAACTCTCCTCACGTTGGCTCCTGCATACGTCCGCTTGAACACGTaGCGGGTCACAAACCTCATTGCATTACCAACATCTCGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: ATLLTLAPAYVRLNT*RVTNLIALPTSRGS
Trigger: AGAGCCCCGAGATGTTGGTAATGCAATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 72 bp GTGTCCCAAAGAGACCGCAAGAACTGTGCGTTCAGATaGGTTGGCCCACTGACGTTGACTTGCAGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: VSQRDRKNCAFR*VGPLTLTCSKL
Trigger: CAGCTTGCTGCAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCACAGTTCTTGCGGTCTCTTTGGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp TTACTCCTTTTCGTCCCATCTGACCGTAGCCTGGGATaGCAGAATCTCCCTGTCTTCCTCGCTGCCCAGTTT +
Preference number: 6 (lower is better)
Translates to: LLLFVPSDRSLG*QNLPVFLAAQF
Trigger: AAACTGGGCAGCGAGGAAGACAGGGAGATTCTGGCATCCCAGGCTACGGTCAGATGGGACGAAAAGGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp CGTCCGCTTGAACACGTTGCGGGTCACAAACCTCATTaGATTACCAACATCTCGGGGCTCTGTGGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: RPLEHVAGHKPH*ITNISGLCGVL
Trigger: CAAGACACCACAGAGCCCCGAGATGTTGGTAATGCAATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 72 bp GTGAGTGTCCAGAGACGCTCCAGCTGTTTGCTGGCTTaGTTTCAGAGAAGCCGCCGGCTGCCAAATGAACTT +
Preference number: 6 (lower is better)
Translates to: VSVQRRSSCLLA*FQRSRRLPNEL
Trigger: AAGTTCATTTGGCAGCCGGCGGCTTCTCTGAAACAAAGCCAGCAAACAGCTGGAGCGTCTCTGGACACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 72 bp CAGCATCATGCACCTCATCATCTGATGGTCTGTGGGTaGCCAGAACTGCAATCTGAGGCACTCCTTGTGCTC +
Preference number: 6 (lower is better)
Translates to: QHHAPHHLMVCG*PELQSEALLVL
Trigger: GAGCACAAGGAGTGCCTCAGATTGCAGTTCTGGTCACCCACAGACCATCAGATGATGAGGTGCATGATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 72 bp TCGAAGGTTCAGCGCAGCATCATGCACCTCATCATCTaGTGGTCTGTGGGTGACCAGAACTGCAATCTGAGG +
Preference number: 6 (lower is better)
Translates to: SKVQRSIMHLII*WSVGDQNCNLR
Trigger: CCTCAGATTGCAGTTCTGGTCACCCACAGACCATCAGATGATGAGGTGCATGATGCTGCGCTGAACCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 72 bp CAACTCTCCTCACGTTGGCTCCTGCATACGTCCGCTTaGACACGTTGCGGGTCACAAACCTCATTGCATTAC +
Preference number: 6 (lower is better)
Translates to: QLSSRWLLHTSA*TRCGSQTSLHY
Trigger: GTAATGCAATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CCA 72 bp GTAGACAGGGCATTCTTCAGTGTTAGGCATATAGCCTaGAGGAGAGTAGCTCAGGACAGCAACCCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: VDRAFFSVRHIA*RRVAQDSNPVS
Trigger: GGAGACAGGGTTGCTGTCCTGAGCTACTCTCCTCCAGGCTATATGCCTAACACTGAAGAATGCCCTGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
ENST00000512836.5
CDS CAA 72 bp AGTTTTAATGTGAGTGTCCAGAGACGCTCCAGCTGTTaGCTGGCTTTGTTTCAGAGAAGCCGCCGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: SFNVSVQRRSSC*LALFQRSRRLP
Trigger: TGGCAGCCGGCGGCTTCTCTGAAACAAAGCCAGCAAACAGCTGGAGCGTCTCTGGACACTCACATTAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp GCAACTCTCCTCACGTTGGCTCCTGCATACGTCCGCTaGAACACGTTGCGGGTCACAAACCTCATTGCATTA +
Preference number: 6 (lower is better)
Translates to: ATLLTLAPAYVR*NTLRVTNLIAL
Trigger: TAATGCAATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 72 bp AGTCTACAGGCATCCTCAAGCATCGGTGGTGGGTACTaGTTGAATCCCCGCCTGACCGAGTATAAAAATGGC +
Preference number: 6 (lower is better)
Translates to: SLQASSSIGGGY*LNPRLTEYKNG
Trigger: GCCATTTTTATACTCGGTCAGGCGGGGATTCAATCAGTACCCACCACCGATGCTTGAGGATGCCTGTAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512836.5
CDS GCA 72 bp TTTACATCCTCCAGTCGAAGGTTCAGCGCAGCATCATaGACCTCATCATCTGATGGTCTGTGGGTGACCAGA +
Preference number: 6 (lower is better)
Translates to: FTSSSRRFSAAS*TSSSDGLWVTR
Trigger: TCTGGTCACCCACAGACCATCAGATGATGAGGTGCATGATGCTGCGCTGAACCTTCGACTGGAGGATGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 72 bp CCAAAGAGACCGCAAGAACTGTGCGTTCAGATGAGTTaGCCCACTGACGTTGACTTGCAGCAAGCTGTCAAA +
Preference number: 6 (lower is better)
Translates to: PKRPQELCVQMS*PTDVDLQQAVK
Trigger: TTTGACAGCTTGCTGCAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCACAGTTCTTGCGGTCTCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 72 bp TCTGAAGAGACTCAGATTGGCTTCAGGGAGCAGGGCTaGCCAAATATAACTAACCCAAGCTGCTGGCTAGAG +
Preference number: 6 (lower is better)
Translates to: SEETQIGFREQG*PNITNPSCWLE
Trigger: CTCTAGCCAGCAGCTTGGGTTAGTTATATTTGGCCAGCCCTGCTCCCTGAAGCCAATCTGAGTCTCTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512482.1
CDS CAA 72 bp TTCAAGCCTACAGTGAGTGCTAGTCCCCTAAATCCTTaGGGTCCAGGTCCCCCAGGAATTCCAGGATTACCA +
Preference number: 6 (lower is better)
Translates to: FKPTVSASPLNP*GPGPPGIPGLP
Trigger: TGGTAATCCTGGAATTCCTGGGGGACCTGGACCCAAAGGATTTAGGGGACTAGCACTCACTGTAGGCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp CTCACGTTGGCTCCTGCATACGTCCGCTTGAACACGTaGCGGGTCACAAACCTCATTGCATTACCAACATCT +
Preference number: 6 (lower is better)
Translates to: LTLAPAYVRLNT*RVTNLIALPTS
Trigger: AGATGTTGGTAATGCAATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGGAGCCAACGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 90 bp AGTTTTAATGTGAGTGTCCAGAGACGCTCCAGCTGTTTGCTGGCTTaGTTTCAGAGAAGCCGCCGGCTGCCAAATGAACTTAGGGAGTCA +
Preference number: 6 (lower is better)
Translates to: SFNVSVQRRSSCLLA*FQRSRRLPNELRES
Trigger: TGACTCCCTAAGTTCATTTGGCAGCCGGCGGCTTCTCTGAAACAAAGCCAGCAAACAGCTGGAGCGTCTCTGGACACTCACATTAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 72 bp ATTGTAGTCAGACCAGCGGATGAGATAGCTGGTGCCTaGGTTATAGGAAACCATGGCAACTCTTGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: IVVRPADEIAGA*VIGNHGNSCSH
Trigger: GTGGGAGCAAGAGTTGCCATGGTTTCCTATAACTCAGGCACCAGCTATCTCATCCGCTGGTCTGACTACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 72 bp GGAGCTGCTTCTTCCTATTGTAGTCAGACCAGCGGATaGGATAGCTGGTGCCTGAGTTATAGGAAACCATGG +
Preference number: 6 (lower is better)
Translates to: GAASSYCSQTSG*DSWCLSYRKPW
Trigger: CCATGGTTTCCTATAACTCAGGCACCAGCTATCTCATCCGCTGGTCTGACTACAATAGGAAGAAGCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS GCA 72 bp GAACTGCAATCTGAGGCACTCCTTGTGCTCTTCTGCTaGCATATGACTCTGAGAAGCCGTCTCTTCTCATCT +
Preference number: 6 (lower is better)
Translates to: ELQSEALLVLFC*HMTLRSRLFSS
Trigger: AGATGAGAAGAGACGGCTTCTCAGAGTCATATGGCAGCAGAAGAGCACAAGGAGTGCCTCAGATTGCAGTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 72 bp ACACGAGGTCAGCGAGTGAATCTTTCTGACAGGATATaGGGAAGTGAACTTGCATATCAGCATCGACGGCTC +
Preference number: 6 (lower is better)
Translates to: TRGQRVNLSDRI*GSELAYQHRRL
Trigger: GAGCCGTCGATGCTGATATGCAAGTTCACTTCCCCATATCCTGTCAGAAAGATTCACTCGCTGACCTCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp CTCTTCACAAGTTTTAATGTGAGTGTCCAGAGACGCTCCAGCTGTTaGCTGGCTTTGTTTCAGAGAAGCCGCCGGCTGCCAAATGAACTT +
Preference number: 6 (lower is better)
Translates to: LFTSFNVSVQRRSSC*LALFQRSRRLPNEL
Trigger: AAGTTCATTTGGCAGCCGGCGGCTTCTCTGAAACAAAGCCAGCAAACAGCTGGAGCGTCTCTGGACACTCACATTAAAACTTGTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp AAAAACACAGCAACTCTCCTCACGTTGGCTCCTGCATACGTCCGCTaGAACACGTTGCGGGTCACAAACCTCATTGCATTACCAACATCT +
Preference number: 6 (lower is better)
Translates to: KNTATLLTLAPAYVR*NTLRVTNLIALPTS
Trigger: AGATGTTGGTAATGCAATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGGAGCCAACGTGAGGAGAGTTGCTGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 72 bp TTCAAGCATTATGTTGCTTTCACTCTGGAGACCGTCTaGAAAAATAAGCAGCACCTGGCCCCGGGATGCAGA +
Preference number: 6 (lower is better)
Translates to: FKHYVAFTLETV*KNKQHLAPGCR
Trigger: TCTGCATCCCGGGGCCAGGTGCTGCTTATTTTTTCAGACGGTCTCCAGAGTGAAAGCAACATAATGCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp GCTGTTTGCTGGCTTTGTTTCAGAGAAGCCGCCGGCTaGCAAATGAACTTAGGGAGTCAGAATTTCTCAGAA +
Preference number: 6 (lower is better)
Translates to: AVCWLCFREAAG*QMNLGSQNFSE
Trigger: TTCTGAGAAATTCTGACTCCCTAAGTTCATTTGGCAGCCGGCGGCTTCTCTGAAACAAAGCCAGCAAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp CCCACTGACGTTGACTTGCAGCAAGCTGTCAAACACTaGTTTCTGATAGATTTGGAACTTGGCAGGGAATCC +
Preference number: 6 (lower is better)
Translates to: PTDVDLQQAVKH*FLIDLELGRES
Trigger: GGATTCCCTGCCAAGTTCCAAATCTATCAGAAAGCAGTGTTTGACAGCTTGCTGCAAGTCAACGTCAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp ATCCTTAAATGTGTCCCAAAGAGACCGCAAGAACTGTaGGTTCAGATGAGTTGGCCCACTGACGTTGACTTG +
Preference number: 6 (lower is better)
Translates to: ILKCVPKRPQEL*VQMSWPTDVDL
Trigger: CAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCACAGTTCTTGCGGTCTCTTTGGGACACATTTAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp ATAGCGAGGATCTCCAGATGTGATAACAACCAAAGTTaGGGGGACACCAGCATTTCTTCTCCCACCAGCATG +
Preference number: 6 (lower is better)
Translates to: IARISRCDNNQS*GDTSISSPTSM
Trigger: CATGCTGGTGGGAGAAGAAATGCTGGTGTCCCCCAAACTTTGGTTGTTATCACATCTGGAGATCCTCGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp CTGTGCGTTCAGATGAGTTGGCCCACTGACGTTGACTaGCAGCAAGCTGTCAAACACTGCTTTCTGATAGAT +
Preference number: 6 (lower is better)
Translates to: LCVQMSWPTDVD*QQAVKHCFLID
Trigger: ATCTATCAGAAAGCAGTGTTTGACAGCTTGCTGCAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp GTCAAACACTGCTTTCTGATAGATTTGGAACTTGGCAGGGAATCCTaGGTCACTGTTCACCTTAAACGCCAAGCTCACCTGTGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: VKHCFLIDLELGRES*VTVHLKRQAHLCLC
Trigger: ACAGAGGCACAGGTGAGCTTGGCGTTTAAGGTGAACAGTGACCAAGGATTCCCTGCCAAGTTCCAAATCTATCAGAAAGCAGTGTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp CCGCAAGAACTGTGCGTTCAGATGAGTTGGCCCACTGACGTTGACTaGCAGCAAGCTGTCAAACACTGCTTTCTGATAGATTTGGAACTT +
Preference number: 6 (lower is better)
Translates to: PQELCVQMSWPTDVD*QQAVKHCFLIDLEL
Trigger: AAGTTCCAAATCTATCAGAAAGCAGTGTTTGACAGCTTGCTGCAAGTCAACGTCAGTGGGCCAACTCATCTGAACGCACAGTTCTTGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp GACGTTGACTTGCAGCAAGCTGTCAAACACTGCTTTCTGATAGATTaGGAACTTGGCAGGGAATCCTTGGTCACTGTTCACCTTAAACGC +
Preference number: 6 (lower is better)
Translates to: DVDLQQAVKHCFLID*ELGRESLVTVHLKR
Trigger: GCGTTTAAGGTGAACAGTGACCAAGGATTCCCTGCCAAGTTCCAAATCTATCAGAAAGCAGTGTTTGACAGCTTGCTGCAAGTCAACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp CACAAACCTCATTGCATTACCAACATCTCGGGGCTCTGTGGTGTCTaGATATTTTATTTGGGAAAGCTGCTGGAGGAGCTGCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: HKPHCITNISGLCGV*IFYLGKLLEELLLP
Trigger: AGGAAGAAGCAGCTCCTCCAGCAGCTTTCCCAAATAAAATATCAAGACACCACAGAGCCCCGAGATGTTGGTAATGCAATGAGGTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 90 bp CCAGGAAGAAGTAATACAGTGTTTTCTGTGCCACCGTTCTCTGGGTaGGGAGAGGTCATGTTAACACATGTGGCTTTCATATCTTCGGTG +
Preference number: 6 (lower is better)
Translates to: PGRSNTVFSVPPFSG*GEVMLTHVAFISSV
Trigger: CACCGAAGATATGAAAGCCACATGTGTTAACATGACCTCTCCCAACCCAGAGAACGGTGGCACAGAAAACACTGTATTACTTCTTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
CDS TCA 72 bp ACATCCATGGAGCTGGTAATGTTCTCAAGGAAGGTCTaGAGATGCCTTAAATTTCCTCCGGTCCCAAGTGAC +
Preference number: 6 (lower is better)
Translates to: TSMELVMFSRKV*RCLKFPPVPSD
Trigger: GTCACTTGGGACCGGAGGAAATTTAAGGCATCTTCAGACCTTCCTTGAGAACATTACCAGCTCCATGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 72 bp CGACTCTGTCTGTGGACATCCCATCAGTCAACACAATaGGGTAACAGGGAACCTTGCTCATTCTATCCTTCA +
Preference number: 6 (lower is better)
Translates to: RLCLWTSHQSTQ*GNREPCSFYPS
Trigger: TGAAGGATAGAATGAGCAAGGTTCCCTGTTACCTCATTGTGTTGACTGATGGGATGTCCACAGACAGAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 72 bp ATTGCATTACCAACATCTCGGGGCTCTGTGGTGTCTTaGTATTTTATTTGGGAAAGCTGCTGGAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: IALPTSRGSVVS*YFIWESCWRSC
Trigger: GCAGCTCCTCCAGCAGCTTTCCCAAATAAAATATCAAGACACCACAGAGCCCCGAGATGTTGGTAATGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS GCA 72 bp CAGGACACAAATTCCAAGGTCCTTCAGGGTTTTTACTaGATCTGCCACATCATAGCGAGGATCTCCAGATGT +
Preference number: 6 (lower is better)
Translates to: QDTNSKVLQGFY*ICHIIARISRC
Trigger: ACATCTGGAGATCCTCGCTATGATGTGGCAGATGCAGTAAAAACCCTGAAGGACCTTGGAATTTGTGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 72 bp TTCTCCTGGATGCTGCTTGAGCCATCAATGAGGAAGTaGATATCAGCCTCTTTTGTATCCACACAGCCAGTT +
Preference number: 6 (lower is better)
Translates to: FSWMLLEPSMRK*ISASFVSTQPV
Trigger: AACTGGCTGTGTGGATACAAAAGAGGCTGATATCCACTTCCTCATTGATGGCTCAAGCAGCATCCAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp TGCTTTCTGATAGATTTGGAACTTGGCAGGGAATCCTaGGTCACTGTTCACCTTAAACGCCAAGCTCACCTG +
Preference number: 6 (lower is better)
Translates to: CFLIDLELGRES*VTVHLKRQAHL
Trigger: CAGGTGAGCTTGGCGTTTAAGGTGAACAGTGACCAAGGATTCCCTGCCAAGTTCCAAATCTATCAGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp CATTGCATTACCAACATCTCGGGGCTCTGTGGTGTCTaGATATTTTATTTGGGAAAGCTGCTGGAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: HCITNISGLCGV*IFYLGKLLEEL
Trigger: CAGCTCCTCCAGCAGCTTTCCCAAATAAAATATCAAGACACCACAGAGCCCCGAGATGTTGGTAATGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 90 bp GATCTATTGGCATTGTATACTCCTACAGAGAAGATGGTCACATCTTaGCCCCGAAGAATTCTAGCAGGATCTCTCACATCATCCTGCGCT +
Preference number: 6 (lower is better)
Translates to: DLLALYTPTEKMVTS*PRRILAGSLTSSCA
Trigger: AGCGCAGGATGATGTGAGAGATCCTGCTAGAATTCTTCGGGGCAAAGATGTGACCATCTTCTCTGTAGGAGTATACAATGCCAATAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 72 bp CAAACTGTTTCTCCTGGATGCTGCTTGAGCCATCAATaGGGAAGTGGATATCAGCCTCTTTTGTATCCACAC +
Preference number: 6 (lower is better)
Translates to: QTVSPGCCLSHQ*GSGYQPLLYPH
Trigger: GTGTGGATACAAAAGAGGCTGATATCCACTTCCTCATTGATGGCTCAAGCAGCATCCAGGAGAAACAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp GTGTCATCTGAATACTGCACAACTCCAACTCGGACTTaGTCTGGGCCAATGCTAAACATTTCTGTCACTTCC +
Preference number: 6 (lower is better)
Translates to: VSSEYCTTPTRT*SGPMLNISVTS
Trigger: GGAAGTGACAGAAATGTTTAGCATTGGCCCAGACAAAGTCCGAGTTGGAGTTGTGCAGTATTCAGATGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp TTGCAGCAAGCTGTCAAACACTGCTTTCTGATAGATTaGGAACTTGGCAGGGAATCCTTGGTCACTGTTCAC +
Preference number: 6 (lower is better)
Translates to: LQQAVKHCFLID*ELGRESLVTVH
Trigger: GTGAACAGTGACCAAGGATTCCCTGCCAAGTTCCAAATCTATCAGAAAGCAGTGTTTGACAGCTTGCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp GAGTCTGAGATTAAAGGGTCTGAAGCAATGTTGAAGTaGTCAATCACTGAGCTCACCAAGGCTTTCACAGCC +
Preference number: 6 (lower is better)
Translates to: ESEIKGSEAMLK*SITELTKAFTA
Trigger: GGCTGTGAAAGCCTTGGTGAGCTCAGTGATTGACAACTTCAACATTGCTTCAGACCCTTTAATCTCAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 90 bp GCAATCCTATCACCAGAGTCTGAGATTAAAGGGTCTGAAGCAATGTaGAAGTTGTCAATCACTGAGCTCACCAAGGCTTTCACAGCCTTA +
Preference number: 6 (lower is better)
Translates to: AILSPESEIKGSEAM*KLSITELTKAFTAL
Trigger: TAAGGCTGTGAAAGCCTTGGTGAGCTCAGTGATTGACAACTTCAACATTGCTTCAGACCCTTTAATCTCAGACTCTGGTGATAGGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 90 bp TATCTTCACCATAATACAGTGTTTTCTGTGCCACCGTTCTCTGGGTaGGGAGAGGTCATGTTAACACATGTGGCTTTCATATCTTCGGTG +
Preference number: 6 (lower is better)
Translates to: YLHHNTVFSVPPFSG*GEVMLTHVAFISSV
Trigger: CACCGAAGATATGAAAGCCACATGTGTTAACATGACCTCTCCCAACCCAGAGAACGGTGGCACAGAAAACACTGTATTATGGTGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512836.5
CDS GCA 72 bp TGCAAAGATGGTGATGCCTTTGTTTCTCAGTTCCAATaGTGTGTCATTGAGCTGATCATGGTCATGGGATTC +
Preference number: 6 (lower is better)
Translates to: CKDGDAFVSQFQ*CVIELIMVMGF
Trigger: GAATCCCATGACCATGATCAGCTCAATGACACAGCATTGGAACTGAGAAACAAAGGCATCACCATCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp ACAAATTCCAAGGTCCTTCAGGGTTTTTACTGCATCTaGCACATCATAGCGAGGATCTCCAGATGTGATAAC +
Preference number: 6 (lower is better)
Translates to: TNSKVLQGFYCI*HIIARISRCDN
Trigger: GTTATCACATCTGGAGATCCTCGCTATGATGTGGCAGATGCAGTAAAAACCCTGAAGGACCTTGGAATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp TTGGGGGTTCCTACAAAGACATTGTCAATTGTCCACTaGAAGGCATGGCCAATAAAAACATCTCCATTGAGC +
Preference number: 6 (lower is better)
Translates to: LGVPTKTLSIVH*KAWPIKTSPLS
Trigger: GCTCAATGGAGATGTTTTTATTGGCCATGCCTTGCAGTGGACAATTGACAATGTCTTTGTAGGAACCCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
ENST00000512836.5
CDS CCA 72 bp GACACTATTTCTTCTAACTGGGTATTGTTAGCCCCTTaGATGCTCAAGGCAAACACGTTTACATCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: DTISSNWVLLAP*MLKANTFTSSS
Trigger: ACTGGAGGATGTAAACGTGTTTGCCTTGAGCATCCAAGGGGCTAACAATACCCAGTTAGAAGAAATAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CCA 72 bp AAATGGCTTGACAAACTTGATGATATAGTTCCAATCTaGCTTGTGGGTTCGGCCAAGTTGGACCAAGTGATG +
Preference number: 6 (lower is better)
Translates to: KWLDKLDDIVPI*LVGSAKLDQVM
Trigger: CATCACTTGGTCCAACTTGGCCGAACCCACAAGCCAGATTGGAACTATATCATCAAGTTTGTCAAGCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
ENST00000512836.5
CDS CAA 72 bp TCACCAGAGTCTGAGATTAAAGGGTCTGAAGCAATGTaGAAGTTGTCAATCACTGAGCTCACCAAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: SPESEIKGSEAM*KLSITELTKAF
Trigger: GAAAGCCTTGGTGAGCTCAGTGATTGACAACTTCAACATTGCTTCAGACCCTTTAATCTCAGACTCTGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 72 bp AGTAATACAGTGTTTTCTGTGCCACCGTTCTCTGGGTaGGGAGAGGTCATGTTAACACATGTGGCTTTCATA +
Preference number: 6 (lower is better)
Translates to: SNTVFSVPPFSG*GEVMLTHVAFI
Trigger: TATGAAAGCCACATGTGTTAACATGACCTCTCCCAACCCAGAGAACGGTGGCACAGAAAACACTGTATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
CDS CAA 90 bp AAAGTGCACAGCGCCGAAGTCTTTCTAATGTTTGATTTTCCCCATTaGGAGGAACTGGAATCACCTGAAATGTTCCAGTGTTGTCAAACC +
Preference number: 6 (lower is better)
Translates to: KVHSAEVFLMFDFPH*EELESPEMFQCCQT
Trigger: GGTTTGACAACACTGGAACATTTCAGGTGATTCCAGTTCCTCCAAATGGGGAAAATCAAACATTAGAAAGACTTCGGCGCTGTGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS TCA 72 bp AGTTCTATTTTATTAGCTGCCCCAATGCCAACTGCATaGACAGTGATTTGCTCAGCCCTTAGTCTCTTAGCA +
Preference number: 6 (lower is better)
Translates to: SSILLAAPMPTA*TVICSALSLLA
Trigger: TGCTAAGAGACTAAGGGCTGAGCAAATCACTGTTCATGCAGTTGGCATTGGGGCAGCTAATAAAATAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS TCA 72 bp AAAACTAGGCTGCTATCCCCACTGATCTCTTCTAGCTaGGATCTATTGGCATTGTATACTCCTACAGAGAAG +
Preference number: 6 (lower is better)
Translates to: KTRLLSPLISSS*DLLALYTPTEK
Trigger: CTTCTCTGTAGGAGTATACAATGCCAATAGATCTCAGCTAGAAGAGATCAGTGGGGATAGCAGCCTAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS GCA 72 bp GCTCACCAAGGCTTTCACAGCCTTAAACTCATCCTTTaGTATATTCCGAGAATTGTCTATGAGGAAGACTAC +
Preference number: 6 (lower is better)
Translates to: AHQGFHSLKLIL*YIPRIVYEEDY
Trigger: GTAGTCTTCCTCATAGACAATTCTCGGAATATAGCAAAGGATGAGTTTAAGGCTGTGAAAGCCTTGGTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 72 bp AGCGCCGAAGTCTTTCTAATGTTTGATTTTCCCCATTaGGAGGAACTGGAATCACCTGAAATGTTCCAGTGT +
Preference number: 6 (lower is better)
Translates to: SAEVFLMFDFPH*EELESPEMFQC
Trigger: ACACTGGAACATTTCAGGTGATTCCAGTTCCTCCAAATGGGGAAAATCAAACATTAGAAAGACTTCGGCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 90 bp TCTGGGCCAATGCTAAACATTTCTGTCACTTCCAACATAAATCTCTaGATTTGCTCAAACTGTTTCTCCTGGATGCTGCTTGAGCCATCA +
Preference number: 6 (lower is better)
Translates to: SGPMLNISVTSNINL*ICSNCFSWMLLEPS
Trigger: TGATGGCTCAAGCAGCATCCAGGAGAAACAGTTTGAGCAAATCAAGAGATTTATGTTGGAAGTGACAGAAATGTTTAGCATTGGCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp TCCACTTCTGTGTCATCTGAATACTGCACAACTCCAACTCGGACTTaGTCTGGGCCAATGCTAAACATTTCTGTCACTTCCAACATAAAT +
Preference number: 6 (lower is better)
Translates to: STSVSSEYCTTPTRT*SGPMLNISVTSNIN
Trigger: ATTTATGTTGGAAGTGACAGAAATGTTTAGCATTGGCCCAGACAAAGTCCGAGTTGGAGTTGTGCAGTATTCAGATGACACAGAAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp TCTTGGAAATCCACCGCTCTTGGAGACATTCTGAATTaGAGTCTTCCACTGGGTTTTAGTCAGAGAGTTTTT +
Preference number: 6 (lower is better)
Translates to: SWKSTALGDILN*SLPLGFSQRVF
Trigger: AAAAACTCTCTGACTAAAACCCAGTGGAAGACTCAAATTCAGAATGTCTCCAAGAGCGGTGGATTTCCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp TCTTCTCATCTGATCAATGGCAGCCCCTGTATTGGATTTCCCAACTaGGATAGAAAGATTCTTGATTTGCTGCTGAAATTCAGATTGGGT +
Preference number: 6 (lower is better)
Translates to: SSHLINGSPCIGFPN*DRKILDLLLKFRLG
Trigger: ACCCAATCTGAATTTCAGCAGCAAATCAAGAATCTTTCTATCCAAGTTGGGAAATCCAATACAGGGGCTGCCATTGATCAGATGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp TGTCCACTGCAAGGCATGGCCAATAAAAACATCTCCATTGAGCTGTaGAGAGTCTTGGAGATGATGTTTCATTTGGTGTATACTGTTATA +
Preference number: 6 (lower is better)
Translates to: CPLQGMANKNISIEL*RVLEMMFHLVYTVI
Trigger: TATAACAGTATACACCAAATGAAACATCATCTCCAAGACTCTCAACAGCTCAATGGAGATGTTTTTATTGGCCATGCCTTGCAGTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
ENST00000512836.5
CDS GCA 72 bp GCCAGTTTCTCAGTTGAAAAGAGCAGATATAACTTCTaGATCAAATCAGTAGCTGTCTCAGAACCACTACTA +
Preference number: 6 (lower is better)
Translates to: ASFSVEKSRYNF*IKSVAVSEPLL
Trigger: TAGTAGTGGTTCTGAGACAGCTACTGATTTGATGCAGAAGTTATATCTGCTCTTTTCAACTGAGAAACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
CDS CCA 72 bp AACATAAATCTCTTGATTTGCTCAAACTGTTTCTCCTaGATGCTGCTTGAGCCATCAATGAGGAAGTGGATA +
Preference number: 6 (lower is better)
Translates to: NINLLICSNCFS*MLLEPSMRKWI
Trigger: TATCCACTTCCTCATTGATGGCTCAAGCAGCATCCAGGAGAAACAGTTTGAGCAAATCAAGAGATTTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp CCCACAGGACAGTTATTTTCCCTGATGTTAAGGTCATaGACAATGGAAGTGATGATGTCCCGTGTTTTATTA +
Preference number: 6 (lower is better)
Translates to: PTGQLFSLMLRS*TMEVMMSRVLL
Trigger: TAATAAAACACGGGACATCATCACTTCCATTGTCAATGACCTTAACATCAGGGAAAATAACTGTCCTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000512836.5
CDS CAA 72 bp CAAGGCATGGCCAATAAAAACATCTCCATTGAGCTGTaGAGAGTCTTGGAGATGATGTTTCATTTGGTGTAT +
Preference number: 6 (lower is better)
Translates to: QGMANKNISIEL*RVLEMMFHLVY
Trigger: ATACACCAAATGAAACATCATCTCCAAGACTCTCAACAGCTCAATGGAGATGTTTTTATTGGCCATGCCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
ENST00000512836.5
CDS CAA 90 bp TTGTACTGTAAGTTTCTAAGTCTGCATAGGACTTCAGCGTGGAAATaGTCTGTTCTGGAGGATAAGACACTATTTCTTCTAACTGGGTAT +
Preference number: 6 (lower is better)
Translates to: LYCKFLSLHRTSAWK*SVLEDKTLFLLTGY
Trigger: ATACCCAGTTAGAAGAAATAGTGTCTTATCCTCCAGAACAGACAATTTCCACGCTGAAGTCCTATGCAGACTTAGAAACTTACAGTACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp AAAGTCAATTCTTGGAAATCCACCGCTCTTGGAGACATTCTGAATTaGAGTCTTCCACTGGGTTTTAGTCAGAGAGTTTTTCAACTCAAT +
Preference number: 6 (lower is better)
Translates to: KVNSWKSTALGDILN*SLPLGFSQRVFQLN
Trigger: ATTGAGTTGAAAAACTCTCTGACTAAAACCCAGTGGAAGACTCAAATTCAGAATGTCTCCAAGAGCGGTGGATTTCCAAGAATTGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp ATCCTTACGTGTAGAGCCCAGAGAAATCACAAATATGACGTAGCCTaGACACTTAGCCCTCAAAGCCATCATTTTTACAAATTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: ILTCRAQRNHKYDVA*TLSPQSHHFYKFFS
Trigger: AGAAAAGAATTTGTAAAAATGATGGCTTTGAGGGCTAAGTGTCAAGGCTACGTCATATTTGTGATTTCTCTGGGCTCTACACGTAAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512836.5
CDS CCA 72 bp TACTGTAAGTTTCTAAGTCTGCATAGGACTTCAGCGTaGAAATTGTCTGTTCTGGAGGATAAGACACTATTT +
Preference number: 6 (lower is better)
Translates to: YCKFLSLHRTSA*KLSVLEDKTLF
Trigger: AAATAGTGTCTTATCCTCCAGAACAGACAATTTCCACGCTGAAGTCCTATGCAGACTTAGAAACTTACAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 72 bp ATGACAGACCTCTGGTGCTTCAGTACACATACGTTCTaGAACAAGTGTGAAAACATCTTTCAGTTTGTCAAA +
Preference number: 6 (lower is better)
Translates to: MTDLWCFSTHTF*NKCENIFQFVK
Trigger: TTTGACAAACTGAAAGATGTTTTCACACTTGTTCAAGAACGTATGTGTACTGAAGCACCAGAGGTCTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265379.10
ENST00000312481.11
CDS CAA 90 bp AACATCTCCATTGAGCTGTTGAGAGTCTTGGAGATGATGTTTCATTaGGTGTATACTGTTATAAGTAACCAAATCAAATTCCAGGTAGAC +
Preference number: 6 (lower is better)
Translates to: NISIELLRVLEMMFH*VYTVISNQIKFQVD
Trigger: GTCTACCTGGAATTTGATTTGGTTACTTATAACAGTATACACCAAATGAAACATCATCTCCAAGACTCTCAACAGCTCAATGGAGATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265379.10
ENST00000312481.11
ENST00000373157.8
ENST00000512482.1
ENST00000512836.5