RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL6A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000163359

Ensembl transcript IDs: ENST00000295550.9, ENST00000347401.7, ENST00000347401.8, ENST00000353578.8, ENST00000353578.9, ENST00000392003.6, ENST00000392004.7, ENST00000433762.1, ENST00000468792.1, ENST00000472056.5, ENST00000473258.1, ENST00000491233.1, ENST00000491769.1, ENST00000493475.2, ENST00000493608.1, ENST00000682405.1, ENST00000682957.1, ENST00000683145.1, ENST00000683155.1, ENST00000683348.1, ENST00000684508.1, ENST00000684597.1

Found 1358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTaGCTCCTTCTTCTTCAAGAGGTATATGATGTTGGCCACCCACGC +
Preference number: 1 (lower is better)
Translates to: GNLHPELLQRQVGDG*LLLLQEVYDVGHPR
Trigger: GCGTGGGTGGCCAACATCATATACCTCTTGAAGAAGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR TCA 90 bp GCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAAATaGTACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGACA +
Preference number: 1 (lower is better)
Translates to: AGCSLPSSSVNQSMK*YSARESTPGASTET
Trigger: TGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR GCA 90 bp TTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAAATGATACAGTaGAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCG +
Preference number: 1 (lower is better)
Translates to: FPPEFECKSKHEMIQ*KGIYTRSFYRDKLA
Trigger: CGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGATTTACACTCGAACTCGGGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR CCA 90 bp GTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTaGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTG +
Preference number: 1 (lower is better)
Translates to: VANCYTTFKVFERTA*RQRARVHRHISTIL
Trigger: CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCATGAAATGATACAGTaGAAGGGAATCTACACCCGG +
Preference number: 2 (lower is better)
Translates to: FERTAWRQRARVHRHISTHEMIQ*KGIYTR
Trigger: CCGGGTGTAGATTCCCTTGCACTGTATCATTTCATG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCATACTGATAGGTCATaGAGCAGGATGTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTHTDRS*SRMFPP
Trigger: GGGAGGGAACATCCTGCTGCATGACCTATCAGTATG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGAGACAAGTTGGCGATaGCTGACTCCTTCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTETSWR*LTPSSS
Trigger: TGAAGAAGAAGGAGTCAGCCATCGCCAACTTGTCTC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR CAA 90 bp ATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTaGGCGATGGCTGACTCCTTCTTCTTCAAGAGGTATATGATGTTG +
Preference number: 2 (lower is better)
Translates to: IQCKGIYTRSFYRDK*AMADSFFFKRYMML
Trigger: CAACATCATATACCTCTTGAAGAAGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR TCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCAAGTTGGCGATGGCTaGCTCCTTCTTCTTCAAGAG +
Preference number: 2 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQQVGDG*LLLLQE
Trigger: CTCTTGAAGAAGAAGGAGTCAGCCATCGCCAACTTG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCAAGTTGGCGATGGCTaGCTCCTTCTTCTTCAAGAG +
Preference number: 2 (lower is better)
Translates to: TPAVANCYTTFKVFERTAQVGDG*LLLLQE
Trigger: CTCTTGAAGAAGAAGGAGTCAGCCATCGCCAACTTG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGAGACAAGTTGGCGATaGCTGACTCCTTCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: CYTTFKVFERTAWRQRARETSWR*LTPSSS
Trigger: TGAAGAAGAAGGAGTCAGCCATCGCCAACTTGTCTC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTCTACAGAGACAAGTTaGCGATGGCTGACTCCTTCT +
Preference number: 2 (lower is better)
Translates to: CYTTFKVFERTAWRQRARSTETS*RWLTPS
Trigger: AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTTCGAGAGAACTGCCTaGAGACAGAGAGCGAGGGTC +
Preference number: 2 (lower is better)
Translates to: HETPEGIWIDRNVHINTSFERTA*RQRARV
Trigger: GACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGAGACAAGTTGGCGATaGCTGACTCCTTCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGETSWR*LTPSSS
Trigger: TGAAGAAGAAGGAGTCAGCCATCGCCAACTTGTCTC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGAGACAAGTTGGCGATaGCTGACTCCTTCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: TVTQHSKYSRELPGDRERETSWR*LTPSSS
Trigger: TGAAGAAGAAGGAGTCAGCCATCGCCAACTTGTCTC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCAAGTTGGCGATGGCTaGCTCCTTCTTCTTCAAGAG +
Preference number: 2 (lower is better)
Translates to: HETPEGIWIDRNVHINTSQVGDG*LLLLQE
Trigger: CTCTTGAAGAAGAAGGAGTCAGCCATCGCCAACTTG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACCATGAAATGATACAGTaGAAGGGAATCTACACCCGG +
Preference number: 2 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNHEMIQ*KGIYTR
Trigger: CCGGGTGTAGATTCCCTTGCACTGTATCATTTCATG...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCAAGTTGGCGATGGCTaGCTCCTTCTTCTTCAAGAG +
Preference number: 2 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSQVGDG*LLLLQE
Trigger: CTCTTGAAGAAGAAGGAGTCAGCCATCGCCAACTTG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCATACTGATAGGTCATaGAGCAGGATGTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSHTDRS*SRMFPP
Trigger: GGGAGGGAACATCCTGCTGCATGACCTATCAGTATG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCATGAAATGATACAGTaGAAGGGAATCTACACCCGG +
Preference number: 2 (lower is better)
Translates to: HETPEGIWIDRNVHINTSHEMIQ*KGIYTR
Trigger: CCGGGTGTAGATTCCCTTGCACTGTATCATTTCATG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCAATCAAAGCATGAAATaGTACAGTGCAAGGGAATCT +
Preference number: 2 (lower is better)
Translates to: HETPEGIWIDRNVHINTSNQSMK*YSARES
Trigger: AGATTCCCTTGCACTGTATCATTTCATGCTTTGATT...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR TCA 72 bp CACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTaGCTCCTTCTTCTTCAAGAGGTATATGATGTTGGC +
Preference number: 3 (lower is better)
Translates to: HPELLQRQVGDG*LLLLQEVYDVG
Trigger: GCCAACATCATATACCTCTTGAAGAAGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
3UTR TCA 72 bp TCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAAATaGTACAGTGCAAGGGAATCTACACCCGGAGCTTCT +
Preference number: 3 (lower is better)
Translates to: SLPSSSVNQSMK*YSARESTPGAS
Trigger: AGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGATTTACACTCGAACTCGGGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTCTGCCGCCCTCCCTTaGGCCTCAGCCGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILSAALP*ASAAAP
Trigger: CGGTGCAGCGGCTGAGGCCCAAGGGAGGGCGGCAGA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTGCCCGATGCTGCCGATaGGCCCGCGGTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTARCCR*ARGLPS
Trigger: AGAGGGGAGACCGCGGGCCCATCGGCAGCATCGGGC...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGGCTGCAACACCGGCTaGAGCCTGCTCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTGCNTG*SLLSSS
Trigger: CGAGGAGCTGAGCAGGCTGCAGCCGGTGTTGCAGCC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGGGGCCACGCCAAACTaGTTGAGCTCCACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILGATPN*LSSTAG
Trigger: CCCGGCGGTGGAGCTCAAGCAGTTTGGCGTGGCCCC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGCACCTCTGGTCCCCTaGTCTCCCTCAAAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTAPLVP*SPSKPG
Trigger: GCCGGGCTTTGAGGGAGAGCAGGGGACCAGAGGTGC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGCCTCCTCCAGCTGCTaGTCCGGCACCTCGCCCGTC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSASSSC*SGTSPV
Trigger: GACGGGCGAGGTGCCGGAGCAGCAGCTGGAGGAGGC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCAGACCTGTCGGCCGTaGGGACGATCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILQTCRP*GRSAAG
Trigger: CCCAGCTGCTGATCGTCCTCACGGCCGACAGGTCTG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCACGCCAAACTGCTTaGGCTCCACCGCCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTPRQTA*APPPGR
Trigger: ACGACCCGGCGGTGGAGCTCAAGCAGTTTGGCGTGG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGCAAGCCAGGCAGCATaGCTTGCAATGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTASQAA*LAMGRL
Trigger: GAGCCGCCCCATTGCAAGGCATGCTGCCTGGCTTGC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTTACCCTTTGGCCCGATaGTGCCGATGGGCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTYPLAR*CRWARG
Trigger: ACCGCGGGCCCATCGGCAGCATCGGGCCAAAGGGTA...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGACGCGGACCCGGTCCTaGCCCACATCCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILTRTRS*PTSRLS
Trigger: GGAAAGCCTGGATGTGGGCCAGGACCGGGTCCGCGT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCAGACTGCCCAGCTGTaGGCAGAAGCAGGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTQTAQL*AEAGAA
Trigger: CGCAGCTCCTGCTTCTGCTCACAGCTGGGCAGTCTG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGCTGGCGGACAGCGTTaGCGACGTCCTGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTAGGQR*RRPACS
Trigger: TGAACAAGCAGGACGTCGTCAACGCTGTCCGCCAGC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCAGCCCTGGAAACCTTaGGTGCCGTTCACACCAGGC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTQPWKP*VPFTPG
Trigger: GCCTGGTGTGAACGGCACTCAAGGTTTCCAGGGCTG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCACGCGGCTGCCCCCTaGCCGGGTGAAGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSHAAAP*PGEVVL
Trigger: GAGAACCACTTCACCCGGGCAGGGGGCAGCCGCGTG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGGACGCCCTCTTCAATaGGGCTCCCCAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSGRPLQ*GSPGAS
Trigger: AGAGGCCCCTGGGGAGCCGCATTGAAGAGGGCGTCC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGGCGTCAGCAGTTTCTaGTCCAGGCTGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILGVSSF*SRLGSS
Trigger: GGAGCTGCCCAGCCTGGAGCAGAAACTGCTGACGCC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGCTGGTCCAGGCGGCTaGCTGCCTCAGGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILAGPGG*LPQAQS
Trigger: ACTTTGTGCCTGAGGCAGGCAGCCGCCTGGACCAGC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCCAGTGGACCGGTTCTaGCTCGTTCTCCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTPVDRF*LVLQEH
Trigger: GTGCTCCTGGAGAACGAGGCAGAACCGGTCCACTGG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGAGGCTTCGCTGCCGTTaGTGGCTTCACCGCCACTGG +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILRLRCR*WLHRHW
Trigger: CCAGTGGCGGTGAAGCCAGCAACGGCAGCGAAGCCT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGCCTCAGGCGCCGTATaGCGTCCAGCACCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMASGAV*RPAPGP
Trigger: AGGCCCCGGTGCTGGACGCCATACGGCGCCTGAGGC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTAGGGGTGTCCACCCCTaGAGGTGCAGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSRGVHP*RCRSGC
Trigger: GCAGCCACTCCTGCACCTCCAGGGGTGGACACCCCT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCCACGCGGAACGCTGTaGCGCTGTTGGACGCTATCT +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTPRGTL*RCWTLS
Trigger: AGATAGCGTCCAACAGCGCCACAGCGTTCCGCGTGG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCAGTTCGGACAGCTCCTaGACGTTGCCCACGCGGAAC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTSSDSS*TLPTRN
Trigger: GTTCCGCGTGGGCAACGTCCAGGAGCTGTCCGAACT...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCTGACACACGCACGGTaGGCGAGCGGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTLTHAR*ASGHRC
Trigger: GCAGCGGTGGCCGCTCGCCCACCGTGCGTGTGTCAG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCCCTTTACTCCTCTCTaGCCCGGGCAGCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTPFTPL*PGQPWK
Trigger: TTTCCAGGGCTGCCCGGGCCAGAGAGGAGTAAAGGG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGGCCCTGTGCACCTCTaGTCCCCTGCTCTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILGPVHL*SPALPQ
Trigger: TTGAGGGAGAGCAGGGGACCAGAGGTGCACAGGGCC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGCCCTTGGGACCAGCTaGTCCTGGGTAGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSALGTS*SWVARV
Trigger: GACCCTGGCTACCCAGGACCAGCTGGTCCCAAGGGC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCGCTTGCTCTCTGGCTaGGCGAGTGGTACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTRLLSG*ASGTSS
Trigger: GGAGGAAGTACCACTCGCTCAGCCAGAGAGCAAGCG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGAGGGAAGCCGCTCCTaGCGCCCTCAGAGCCATCAA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSEGSRS*RPQSHQ
Trigger: TTGATGGCTCTGAGGGCGTCAGGAGCGGCTTCCCTC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCGTTCCTGGCGATCGTaGAAGGGGCCACGCCAAACT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILRSWRS*KGPRQT
Trigger: AGTTTGGCGTGGCCCCTTTCACGATCGCCAGGAACG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCGTTCCTGGCGATCGTaGAAGGGGCCACGCCAAACT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTRSWRS*KGPRQT
Trigger: AGTTTGGCGTGGCCCCTTTCACGATCGCCAGGAACG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGAGGGTCCTGAGAGGTaGCAGCAAGCCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILEGPER*QQARQH
Trigger: ATGCTGCCTGGCTTGCTGGCACCTCTCAGGACCCTC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTACAGCTCCTGGACGTTaGCCACGCGGAACGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSTAPGR*PRGTLW
Trigger: CCACAGCGTTCCGCGTGGGCAACGTCCAGGAGCTGT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCCTTTGGCCCGATGCTaGCGATGGGCCCGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMPLARC*RWARGL
Trigger: GAGACCGCGGGCCCATCGGCAGCATCGGGCCAAAGG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTGGGCCTCCTCCAGCTaGTGCTCCGGCACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARWASSS*CSGTSP
Trigger: GGGCGAGGTGCCGGAGCAGCAGCTGGAGGAGGCCCA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGGCAGCTGGTTTGGCTaGCTGTGGCCTAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSGSWFG*LWPRDL
Trigger: GAGGTCCCTAGGCCACAGGCAGCCAAACCAGCTGCC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTGCCACATGGTATGTCTaGCCAGCGAGCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTATWYV*PASRPP
Trigger: TGGAGGCCTGCTCGCTGGGCAGACATACCATGTGGC...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGCCCTGGAGGCGGCCTaGGCTCCAAGGCCGAATGAG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTALEAA*APRPNE
Trigger: CTCATTCGGCCTTGGAGCCCAGGCCGCCTCCAGGGC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTAGGCCCGAACCTCCCTaGAGCTGCAGCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSRPEPP*SCSCLR
Trigger: TCTGAGGCAGCTGCAGCTCCAGGGAGGTTCGGGCCT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCCCAGCAGGGTCAGCTaGCGGACAGCGTTGACGACG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSPSRVS*RTALTT
Trigger: CGTCGTCAACGCTGTCCGCCAGCTGACCCTGCTGGG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTTCACCAGCTCCTCCTaGTCTGCGTTCCTGGCGATC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTFTSSS*SAFLAI
Trigger: GATCGCCAGGAACGCAGACCAGGAGGAGCTGGTGAA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCCCTTTACTCCTCTCTaGCCCGGGCAGCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILPFTPL*PGQPWK
Trigger: TTTCCAGGGCTGCCCGGGCCAGAGAGGAGTAAAGGG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTTCGCCCTTCTCTCCTaGGAATCCCCGAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTFALLS*ESPRAL
Trigger: AAGGGCTCTCGGGGATTCCCAGGAGAGAAGGGCGAA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGGGCACATTGATCGATaGAGTCGCCCCTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTGHIDR*SRPCCP
Trigger: AGGGCAACAGGGGCGACTCCATCGATCAATGTGCCC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCAGTGGCCATCTTTGTaGCCACAGGCTTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTQWPSL*PQAWQP
Trigger: TGGCTGCCAAGCCTGTGGCCACAAAGATGGCCACTG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTAACACTACGATAACCTaGGGGACTCCGTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTNTTIT*GTPSPA
Trigger: GGCCGGTGACGGAGTCCCTCAGGTTATCGTAGTGTT...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCAGACTTAAGTTCCGCTaGGGGCAGAGCAAGGCCATC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTRLKFR*GQSKAI
Trigger: GATGGCCTTGCTCTGCCCTCAGCGGAACTTAAGTCT...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTAAGGCCCGGCACTTATaGGGACCAGCACCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSKARHL*GPAPGE
Trigger: TTCCCCAGGTGCTGGTCCTCATAAGTGCCGGGCCTT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCAGTCCCAGTGCAGATaGGCCATCCACCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTQSQCR*AIHQED
Trigger: GTCTTCCTGGTGGATGGCTCATCTGCACTGGGACTG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTGCCGCCAGCTTCCGTaGAGTGGTTGGCATAGACAT +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTCRQLP*SGWHRH
Trigger: ATGTCTATGCCAACCACTTCACGGAAGCTGGCGGCA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTTGCTTCCCGCAGAGCTaGCCAGGATGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTCFPQS*PGCSSG
Trigger: TCCTGAGGAACATCCTGGTCAGCTCTGCGGGAAGCA...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGGGCATTGCCCACGTTaGTCTGCCGCCCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTGHCPR*SAALPW
Trigger: CCAAGGGAGGGCGGCAGATCAACGTGGGCAATGCCC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCCACGCCAAACTGCTTaGGCTCCACCGCCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMPRQTA*APPPGR
Trigger: ACGACCCGGCGGTGGAGCTCAAGCAGTTTGGCGTGG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCCGGCGAGGACTGTCTaGACTTGTTCAGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTPARTV*TCSGRP
Trigger: AGGTCTACCTGAACAAGTTCAGACAGTCCTCGCCGG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTTAGCCGCTCCAAGTTaGCCACTCGTTCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTLAAPS*PLVQGP
Trigger: TGGGCCTTGAACGAGTGGTCAACTTGGAGCGGCTAA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGCGGAGGAAAACTCTTaGAGTCCTTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTAEENS*SPCRRL
Trigger: CAGCCTCCTGCAAGGACTGCAAGAGTTTTCCTCCGC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCTTGGGAAGCGACTCTaGAGCCAGGATAAACGCTGG +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTLGKRL*SQDKRW
Trigger: CCAGCGTTTATCCTGGCTGCAGAGTCGCTTCCCAAG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGGCTGCAACACCGGCTaGAGCCTGCTCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMGCNTG*SLLSSS
Trigger: CGAGGAGCTGAGCAGGCTGCAGCCGGTGTTGCAGCC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTTGGGCCTCAGCCGCTaGACCGCGTTCTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSLGLSR*TAFCTS
Trigger: TGAAGTGCAGAACGCGGTGCAGCGGCTGAGGCCCAA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACCCCTGGAGGTaGAGGAGTGGCTGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARVHPWR*RSGCGG
Trigger: CCCTCCGCAGCCACTCCTGCACCTCCAGGGGTGGAC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCGTAGGGGTGCTGGCTaGGCATGTTCCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILRRGAG*ACSGTS
Trigger: AGAAGTTCCGGAACATGCGCAGCCAGCACCCCTACG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCTCTGCGTCCTTCACTaGCAACTCCGTCTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILLCVLH*QLRLSR
Trigger: ACGGGAGAGACGGAGTTGGCAGTGAAGGACGCAGAG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGCCACTCTGGCGAAGTaGTGGGAGGCCTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSATLAK*WEALGS
Trigger: AGATCCCAAGGCCTCCCAGCACTTCGCCAGAGTGGC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCGCGTGCTGCACAACTaGCACTCTGGCGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSRVLHN*HSGEVL
Trigger: CAGCACTTCGCCAGAGTGGCAGTTGTGCAGCACGCG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATGGGCCTCCTCCAGCTaGTGCTCCGGCACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGWASSS*CSGTSP
Trigger: GGGCGAGGTGCCGGAGCAGCAGCTGGAGGAGGCCCA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCCTTGCATTTGGCCTaGAGGATGACTCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTPLHLA*RMTLWA
Trigger: GGCCCAGAGAGTCATCCTGCAGGCCAAATGCAAGGG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTAGGCTTCGCTGCCGTTaGTGGCTTCACCGCCACTGG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSRLRCR*WLHRHW
Trigger: CCAGTGGCGGTGAAGCCAGCAACGGCAGCGAAGCCT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCTCTGGCTGAGCGAGTaGTACTTCCTCCACACCTCC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTLWLSE*YFLHTS
Trigger: GGAGGTGTGGAGGAAGTACCACTCGCTCAGCCAGAG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCAGCTGGCGAAAGGTaGGAATGGCCACGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTPAGER*EWPRQS
Trigger: ACTTTGCCGTGGCCATTCCCACCTTTCGCCAGCTGG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTCTGCCGCCCTCCCTTaGGCCTCAGCCGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTASAALP*ASAAAP
Trigger: CGGTGCAGCGGCTGAGGCCCAAGGGAGGGCGGCAGA...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTTTCTGCTCCAGGCTaGGCAGCTCCCGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSVSAPG*AAPGRC
Trigger: GCACCTTCCGGGAGCTGCCCAGCCTGGAGCAGAAAC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGCCTCAGGCGCCGTATaGCGTCCAGCACCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERASGAV*RPAPGP
Trigger: AGGCCCCGGTGCTGGACGCCATACGGCGCCTGAGGC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTAGTTCGGACAGCTCCTaGACGTTGCCCACGCGGAAC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSSSDSS*TLPTRN
Trigger: GTTCCGCGTGGGCAACGTCCAGGAGCTGTCCGAACT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTCCCTGGGACACCCATaGGGCCGAGGTCACCGGTTT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSSLGHP*GRGHRF
Trigger: AAACCGGTGACCTCGGCCCCATGGGTGTCCCAGGGA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTACTCCATCTCTCCCTaGGACACCCATGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSYSISP*DTHGAE
Trigger: CTCGGCCCCATGGGTGTCCCAGGGAGAGATGGAGTA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGGGACCAGCTGGTCCTaGGTAGCCAGGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSGTSWS*VARVSL
Trigger: AAGGGAGACCCTGGCTACCCAGGACCAGCTGGTCCC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCGCCCCTGTTGCCCTTaGGACCAGCTGGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMRPCCP*DQLVLG
Trigger: ACCCAGGACCAGCTGGTCCCAAGGGCAACAGGGGCG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCAGACCACAGCCACATaGTATGTCTGCCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTQTTAT*YVCPAS
Trigger: GCTCGCTGGGCAGACATACCATGTGGCTGTGGTCTG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCAGACCACAGCCACATaGTATGTCTGCCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILQTTAT*YVCPAS
Trigger: GCTCGCTGGGCAGACATACCATGTGGCTGTGGTCTG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTTCGAGAGAACTGCCTaGAGACAGAGAGCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTFERTA*RQRARV
Trigger: GACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCCCACTCGGATCTGCTaGGTTCCAATTGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTPTRIC*VPIGSF
Trigger: GAAACTCCCAATTGGAACTCAGCAGATCCGAGTGGG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTCGGTAGCTATGTGCTaGAGCTCTGCCCTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSSVAMC*SSALEA
Trigger: CGCCTCCAGGGCAGAGCTTCAGCACATAGCTACCGA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCGGCAAAGTCCGGGATaGAGGAGATGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILRQSPG*RRWSAS
Trigger: AGATGCAGACCATCTCCTTCATCCCGGACTTTGCCG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTTTGGGACCCATCGATaGGAAAGACCACGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTFGTHR*ERPRPS
Trigger: AGAGGGACGTGGTCTTTCTCATCGATGGGTCCCAAA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGGAAGACATCATTGCTaGACTGCACGACCCCAACTC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTGRHHC*TARPQL
Trigger: GAGTTGGGGTCGTGCAGTTCAGCAATGATGTCTTCC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCGTGTTGGCCACCACTaGCACACGCACGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARRVGHH*HTHGGR
Trigger: TCGCCCACCGTGCGTGTGTCAGTGGTGGCCAACACG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTTCCCCTTCGGCCTCTaGTGCCTTTGGGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSFPFGL*CLWVLL
Trigger: CAACAGGACCCAAAGGCATCAGAGGCCGAAGGGGAA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCCGCTCTCCTGTCCCTaGAGGAAGGCCTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMPLSCP*RKASNC
Trigger: GCAGTTGGAGGCCTTCCTTCAGGGACAGGAGAGCGG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTATTTGGCCTGCAGGATaGCTCTCTGGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSIWPAG*LSGPPP
Trigger: TGGAGGAGGCCCAGAGAGTCATCCTGCAGGCCAAAT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTGCTAGCCTGCTTCAGTaGTACCACCCCGTAGCGAAT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTASLLQ*YHPVAN
Trigger: ATTCGCTACGGGGTGGTAGCACTGAAGCAGGCTAGC...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGGCACAACCCCACTCTaGTTCAGGTTACTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILGTTPL*FRLLAG
Trigger: GCCAGCAAGTAACCTGAAGCAGAGTGGGGTTGTGCC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTGTCAGCGTTCCCGATaGCAATGCCAATGGGCACAG +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILCQRSR*QCQWAQ
Trigger: CTGTGCCCATTGGCATTGGCATCGGGAACGCTGACA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCCCCTAAACTCACAATaGCCGAGGAACGGATCACCT +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTPLNSQ*PRNGSP
Trigger: AGGTGATCCGTTCCTCGGGCATTGTGAGTTTAGGGG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGGTCCACCCCTGGAGGTaGAGGAGTGGCTGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQVHPWR*RSGCGG
Trigger: CCCTCCGCAGCCACTCCTGCACCTCCAGGGGTGGAC...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTCCAGGCGGCTGCCTaGCTCAGGCACAAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSVQAAA*LRHKVV
Trigger: AACCACTTTGTGCCTGAGGCAGGCAGCCGCCTGGAC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCCTTTGGCCCGATGCTaGCGATGGGCCCGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQPLARC*RWARGL
Trigger: GAGACCGCGGGCCCATCGGCAGCATCGGGCCAAAGG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGACCAGCTGGGCCCTGTaGACCTCTGGTCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARTSWAL*TSGPLL
Trigger: GAGCAGGGGACCAGAGGTGCACAGGGCCCAGCTGGT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTCAGAGGGCGCGTGCTaGACAACTGCCACTCTGGCG +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMSEGAC*TTATLA
Trigger: CGCCAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTGCTACAGGCTTCGCTaGCGTTGCTGGCTTCACCGC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSCYRLR*RCWLHR
Trigger: GCGGTGAAGCCAGCAACGGCAGCGAAGCCTGTAGCA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGTCCTTGCAGGAGGCTaGAGCCCAGGAGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSVLAGG*SPGELN
Trigger: GTTCAGTTCTCCTGGGCTCCAGCCTCCTGCAAGGAC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTAGCTCCTGGGCAGGCTaGCTGATTTCATCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTSSWAG*LISSRD
Trigger: GTCCCTAGATGAAATCAGCCAGCCTGCCCAGGAGCT...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCAGGACGATCAGCAGCTaGGGCACACCTTCTGTTATC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTRTISS*GTPSVI
Trigger: GATAACAGAAGGTGTGCCCCAGCTGCTGATCGTCCT...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTGGACGGTCCCCAGCTaGCGAAAGGTGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTWTVPS*RKVGMA
Trigger: GGCCATTCCCACCTTTCGCCAGCTGGGGACCGTCCA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTCAGAGATGACCTGTTaGACGGTCCCCAGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSSEMTC*TVPSWR
Trigger: TCGCCAGCTGGGGACCGTCCAACAGGTCATCTCTGA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTCCTCGCGGGTGAGCTaGGTCACCCTCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSSSRVS*VTLSEM
Trigger: CATCTCTGAGAGGGTGACCCAGCTCACCCGCGAGGA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGTTTCTGCTCCAGGCTaGGCAGCTCCCGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTVSAPG*AAPGRC
Trigger: GCACCTTCCGGGAGCTGCCCAGCCTGGAGCAGAAAC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTCACCTGGGCGAACCTaGACACATCGTCCTGGGATT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILSPGRT*THRPGI
Trigger: AATCCCAGGACGATGTGTCCAGGTTCGCCCAGGTGA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGGGTCAGAGTTGTACTaGACAAGCCCCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTGSELY*TSPTWM
Trigger: CATCCAAGTGGGGCTTGTCCAGTACAACTCTGACCC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTGCACGGACTCCTTCTTaGCGGAGGTTCTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTARTPS*RRFSDA
Trigger: AGCATCTGAGAACCTCCGCCAAGAAGGAGTCCGTGC...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCTGGCTGTCTTGTCCTaGGTTACCCGGGTCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTLAVLS*VTRVPS
Trigger: CGAGGGGACCCGGGTAACCCAGGACAAGACAGCCAG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCCCTCAAAGCCCGGCTaGCCAGGACCGCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARPSKPG*PGPPLL
Trigger: CAACAAGGGCGGTCCTGGCCAGCCGGGCTTTGAGGG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCGGCCGAAAGTGTCTTaGTTGACTCCCTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILRPKVS*LTPSEV
Trigger: CACCTCTGAGGGAGTCAACCAAGACACTTTCGGCCG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCACTGGAACAGGGTGGTaGTCTCAGCGCTGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTTGTGW*SQRCLR
Trigger: TCTTAGACAGCGCTGAGACCACCACCCTGTTCCAGT...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCACTGCCTAAGGCCCTaGTTCCCTGCAACTGTGTCA +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTHCLRP*FPATVS
Trigger: TGACACAGTTGCAGGGAACCAGGGCCTTAGGCAGTG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCACTGCCTAAGGCCCTaGTTCCCTGCAACTGTGTCA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILHCLRP*FPATVS
Trigger: TGACACAGTTGCAGGGAACCAGGGCCTTAGGCAGTG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTTGTGGCCACAGGCTTaGCAGCCACAGGTTTCGCAG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSLWPQA*QPQVSQ
Trigger: CTGCGAAACCTGTGGCTGCCAAGCCTGTGGCCACAA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCTTCGCTGCCGTTGCTaGCTTCACCGCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARLRCRC*LHRHWG
Trigger: CCCCCAGTGGCGGTGAAGCCAGCAACGGCAGCGAAG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTTTCGAGAGAACTGCCTaGAGACAGAGAGCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTFERTA*RQRARV
Trigger: GACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTGCTGCTGCTGGGCATaGGTTGTAGGAAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSCCCWA*VVGKPE
Trigger: CTCAGGCTTTCCTACAACTCATGCCCAGCAGCAGCA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGAACGGGACTCCACCTTaGCATCATCGCTGTACTGAG +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILNGTPP*HHRCTE
Trigger: CTCAGTACAGCGATGATGTCAAGGTGGAGTCCCGTT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGATCAGCTCCTCGCGGGTaGGCTGGGTCACCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERSAPRG*AGSPSQ
Trigger: CTGAGAGGGTGACCCAGCTCACCCGCGAGGAGCTGA...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGGGCATTGCCCACGTTaGTCTGCCGCCCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGGHCPR*SAALPW
Trigger: CCAAGGGAGGGCGGCAGATCAACGTGGGCAATGCCC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCTTCTGGATCTGCTCTaGGGTCAGGGTCGTGATGGG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSLLDLL*GQGRDG
Trigger: CCCATCACGACCCTGACCTCAGAGCAGATCCAGAAG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGTCTGGGGTCATTGGTaGTGGTCTGCAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSVWGHW*WSAALF
Trigger: GAACAGAGCTGCAGACCATCACCAATGACCCCAGAC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCCTGTGCATCTGGCTaGTTCTGTTCAAGATGGCGT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTPCASG*FCSRWR
Trigger: ACGCCATCTTGAACAGAATCAGCCAGATGCACAGGG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCGTGTTGGCCACCACTaGCACACGCACGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTARVGHH*HTHGGR
Trigger: TCGCCCACCGTGCGTGTGTCAGTGGTGGCCAACACG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGGTGATCCCCGCATCTaGGAGCTTGAGCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMGDPRI*ELEHSL
Trigger: GAGGCTGTGCTCAAGCTCTCAGATGCGGGGATCACC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTCAAAGGCTCCTCGTTaGGCTCGGTGGACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSSKAPR*ARWTCP
Trigger: TGGACAAGTCCACCGAGCTCAACGAGGAGCCTTTGA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTTCAGAACCAGGGACTaGTCATGGGCTGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSFRTRD*SWAEVT
Trigger: CGTCACCTCAGCCCATGATCAGTCCCTGGTTCTGAA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCAAGTTGGCGATGGCTaGCTCCTTCTTCTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTQVGDG*LLLLQE
Trigger: CTCTTGAAGAAGAAGGAGTCAGCCATCGCCAACTTG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCCCGAGGGCTTTCACTaGACCCAGAACCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMPEGFH*TQNLGL
Trigger: AAGGCCCAGGTTCTGGGTGCAGTGAAAGCCCTCGGG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTGCATACTGGGCCACTaGCACCTGGATAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILCILGH*HLDKIL
Trigger: CAGGATCTTATCCAGGTGGCAGTGGCCCAGTATGCA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCATCCTCGATCCGGCTaGCAGCAGACTTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTHPRSG*QQTSQK
Trigger: TTTTTGTGAAGTCTGCTGGCAGCCGGATCGAGGATG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCGCTGCACCGCGTTCTaGACTTCATCCTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSRCTAF*TSSLLE
Trigger: TTCCAGCAAGGATGAAGTGCAGAACGCGGTGCAGCG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTTGGGCCTCAGCCGCTaGACCGCGTTCTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMLGLSR*TAFCTS
Trigger: TGAAGTGCAGAACGCGGTGCAGCGGCTGAGGCCCAA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCAGCTCCTCCTGGTCTaGGTTCCTGGCGATCGTGAA +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSQLLLV*VPGDRE
Trigger: TTCACGATCGCCAGGAACGCAGACCAGGAGGAGCTG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGCAGCTCCCGGAAGGTaGTCACCGAGAACACATATT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILAAPGR*SPRTHI
Trigger: AATATGTGTTCTCGGTGAGCACCTTCCGGGAGCTGC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCTGCAGCTGACCCTGTaGATCTGGCTGATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILLQLTL*IWLILF
Trigger: GAACAGAATCAGCCAGATGCACAGGGTCAGCTGCAG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTCTGCCCAGAGCACTTaGAGGGAACCCCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSSAQST*REPHSK
Trigger: CTTGCTGTGGGGTTCCCTGCAAGTGCTCTGGGCAGA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGACCGCGGTCTCCCCTCTaGCCAGAGCACTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGPRSPL*PEHLQG
Trigger: TCCCTGCAAGTGCTCTGGGCAGAGGGGAGACCGCGG...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCCGCGGTCTCCCCTCTaGCCAGAGCACTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAPRSPL*PEHLQG
Trigger: TCCCTGCAAGTGCTCTGGGCAGAGGGGAGACCGCGG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGTACCCTTTGGCCCGATaGTGCCGATGGGCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQYPLAR*CRWARG
Trigger: ACCGCGGGCCCATCGGCAGCATCGGGCCAAAGGGTA...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCGCACCTCTGGTCCCCTaGTCTCCCTCAAAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAAPLVP*SPSKPG
Trigger: GCCGGGCTTTGAGGGAGAGCAGGGGACCAGAGGTGC...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTCTGAGCTGTGGGGATaGTCTTGTGGGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILSELWG*SCGCVA
Trigger: AGCAACACACCCACAAGAGCATCCCCACAGCTCAGA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGTCCACATCGCTCCCTaGCGCTCTCCTGTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTVHIAP*RSPVPE
Trigger: TTCAGGGACAGGAGAGCGGCAGGGAGCGATGTGGAC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACGCAGGGGCCGGCTTTaGAGCGGCTGGCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERRRGRL*SGWLHR
Trigger: TCTGTGAAGCCAGCCGCTGCAAAGCCGGCCCCTGCG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGCCACATGGTATGTCTaGCCAGCGAGCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTATWYV*PASRPP
Trigger: TGGAGGCCTGCTCGCTGGGCAGACATACCATGTGGC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGGCTGAAGCTCTGCCCTaGAGGCGGCCTGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQAEALP*RRPGLQ
Trigger: TTGGAGCCCAGGCCGCCTCCAGGGCAGAGCTTCAGC...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTACAGTGTCTGCATACTaGGCCACTGCCACCTGGATA +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTTVSAY*ATATWI
Trigger: TATCCAGGTGGCAGTGGCCCAGTATGCAGACACTGT...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGACTGGCCCACAAGATTaGCTGAGCCGTCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILTGPQD*LSRQRG
Trigger: TCCTCTTTGACGGCTCAGCCAATCTTGTGGGCCAGT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGACGCGGACCCGGTCCTaGCCCACATCCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQTRTRS*PTSRLS
Trigger: GGAAAGCCTGGATGTGGGCCAGGACCGGGTCCGCGT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGGTAGAACTCGGGCCTaGTCCGGTCGCTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTGRTRA*SGRCTA
Trigger: TGCAGTACAGCGACCGGACCAGGCCCGAGTTCTACC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCCCAGCAGGGTCAGCTaGCGGACAGCGTTGACGACG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAPSRVS*RTALTT
Trigger: CGTCGTCAACGCTGTCCGCCAGCTGACCCTGCTGGG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTGGACGGTCCCCAGCTaGCGAAAGGTGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARWTVPS*RKVGMA
Trigger: GGCCATTCCCACCTTTCGCCAGCTGGGGACCGTCCA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTACCAGGACCAGGTGTTaGGGCACCCCGTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSTRTRC*GTPSSM
Trigger: CATAGAAGACGGGGTGCCCCAACACCTGGTCCTGGT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTCACCTGGGCGAACCTaGACACATCGTCCTGGGATT +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSSPGRT*THRPGI
Trigger: AATCCCAGGACGATGTGTCCAGGTTCGCCCAGGTGA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCTGGAGGTGCAGGAGTaGCTGCGGAGGGTCCAAACG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARLEVQE*LRRVQT
Trigger: CGTTTGGACCCTCCGCAGCCACTCCTGCACCTCCAG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACAGGGGTGTCCACCCCTaGAGGTGCAGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNRGVHP*RCRSGC
Trigger: GCAGCCACTCCTGCACCTCCAGGGGTGGACACCCCT...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTGGACAAGCCCCACTTaGATGGAGTCGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILWTSPT*MESPSS
Trigger: TGAAGATGGCGACTCCATCCAAGTGGGGCTTGTCCA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGGCCCGAGGGCGTGTTaGCCACCACTGACACACGCA +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNGPRAC*PPLTHA
Trigger: TGCGTGTGTCAGTGGTGGCCAACACGCCCTCGGGCC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGGGCCCGAGGGCGTGTTaGCCACCACTGACACACGCA +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQGPRAC*PPLTHA
Trigger: TGCGTGTGTCAGTGGTGGCCAACACGCCCTCGGGCC...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGACCCTCAAAGCCCGGCTaGCCAGGACCGCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGPSKPG*PGPPLL
Trigger: CAACAAGGGCGGTCCTGGCCAGCCGGGCTTTGAGGG...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTTCTCCTATCAGCCCTaGAGGACCAGCAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSFSYQP*RTSRTS
Trigger: GCTGGTCCTGCTGGTCCTCCAGGGCTGATAGGAGAA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCCCGATTCCTCCTTTTaGTCCTGGCTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTPDSSF*SWLSGL
Trigger: GAGCCCGGAGAGCCAGGACCAAAAGGAGGAATCGGG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGACCTGGGTTACCCTTTaGTCCTGGGTATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILTWVTL*SWVSRE
Trigger: TTCCCTGGATACCCAGGACCAAAGGGTAACCCAGGT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACGCCCCTGTTGCCCTTaGGACCAGCTGGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERRPCCP*DQLVLG
Trigger: ACCCAGGACCAGCTGGTCCCAAGGGCAACAGGGGCG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCCAGACTCTGCTGTTTaGATGTCAGAGCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTPDSAV*MSEPPE
Trigger: TTCAGGTGGCTCTGACATCCAAACAGCAGAGTCTGG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTAGCCTCTCTGAGCTGTaGGGATGCTCTTGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSSLSEL*GCSCGC
Trigger: ACACCCACAAGAGCATCCCCACAGCTCAGAGAGGCT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGACTCTGGCGAAGTGCTaGGAGGCCTTGGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTTLAKC*EALGSG
Trigger: CCCAGATCCCAAGGCCTCCCAGCACTTCGCCAGAGT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGCACAACTGCCACTCTaGCGAAGTGCTGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMAQLPL*RSAGRP
Trigger: AGGCCTCCCAGCACTTCGCCAGAGTGGCAGTTGTGC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCTTCGCTGCCGTTGCTaGCTTCACCGCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQLRCRC*LHRHWG
Trigger: CCCCCAGTGGCGGTGAAGCCAGCAACGGCAGCGAAG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAACCCCTGAGCAAACCTaGAGGCGTGTGTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGTPEQT*RRVSLG
Trigger: GCCCAGGGACACACGCCTTCAGGTTTGCTCAGGGGT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAACCCCTGAGCAAACCTaGAGGCGTGTGTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERTPEQT*RRVSLG
Trigger: GCCCAGGGACACACGCCTTCAGGTTTGCTCAGGGGT...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTACATCATCGCTGTACTaGGCCACCGCAATTCGGGTC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSTSSLY*ATAIRV
Trigger: GACCCGAATTGCGGTGGCTCAGTACAGCGATGATGT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTCTTGGCTTGGAAGATaGAAGGCACAACCCCACTCT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILSWLGR*KAQPHS
Trigger: AGAGTGGGGTTGTGCCTTTCATCTTCCAAGCCAAGA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGCTCCATCAGTAAAATaGATGACCACCTTCACGCTG +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTAPSVK*MTTFTL
Trigger: CAGCGTGAAGGTGGTCATTCATTTTACTGATGGAGC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTTAGCCGCTCCAAGTTaGCCACTCGTTCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSLAAPS*PLVQGP
Trigger: TGGGCCTTGAACGAGTGGTCAACTTGGAGCGGCTAA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCCGCTCTCCTGTCCCTaGAGGAAGGCCTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAPLSCP*RKASNC
Trigger: GCAGTTGGAGGCCTTCCTTCAGGGACAGGAGAGCGG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGAAGCATTTTCACTGCTaGCGAAGGATGGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILKHFHC*RRMATA
Trigger: GGCTGTTGCCATCCTTCGTCAGCAGTGAAAATGCTT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCAAGTTGGCGATGGCTaGCTCCTTCTTCTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTQVGDG*LLLLQE
Trigger: CTCTTGAAGAAGAAGGAGTCAGCCATCGCCAACTTG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTGGCAAAGGCCATTATaGTGCTTCTCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTWQRPL*CFSSAP
Trigger: AGGAGCTGAAGAGAAGCAGCATAATGGCCTTTGCCA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACCAGGCAGCATGCCTTaGAATGGGGCGGCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRPGSMP*NGAARN
Trigger: GTTCCGAGCCGCCCCATTGCAAGGCATGCTGCCTGG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCCAGGCAGCATGCCTTaGAATGGGGCGGCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQPGSMP*NGAARN
Trigger: GTTCCGAGCCGCCCCATTGCAAGGCATGCTGCCTGG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTTCAGGCTTACTCTGGTaGTCATCAAAACGGGACTCC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTSGLLW*SSKRDS
Trigger: GGAGTCCCGTTTTGATGAGCACCAGAGTAAGCCTGA...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCATCCTCGATCCGGCTaGCAGCAGACTTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILHPRSG*QQTSQK
Trigger: TTTTTGTGAAGTCTGCTGGCAGCCGGATCGAGGATG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTTGCCCACGTTGATCTaGCGCCCTCCCTTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNLPTLI*RPPLGL
Trigger: GAGGCCCAAGGGAGGGCGGCAGATCAACGTGGGCAA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATTGCCCACGTTGATCTaGCGCCCTCCCTTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRLPTLI*RPPLGL
Trigger: GAGGCCCAAGGGAGGGCGGCAGATCAACGTGGGCAA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGGGGCCACGCCAAACTaGTTGAGCTCCACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSGATPN*LSSTAG
Trigger: CCCGGCGGTGGAGCTCAAGCAGTTTGGCGTGGCCCC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCGTCAGCAGTTTCTaGTCCAGGCTGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERGVSSF*SRLGSS
Trigger: GGAGCTGCCCAGCCTGGAGCAGAAACTGCTGACGCC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGAGGTGCAGGAGTGGCTaGGGAGGGTCCAAACGAGTT +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTRCRSG*GGSKRV
Trigger: AACTCGTTTGGACCCTCCGCAGCCACTCCTGCACCT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAGGTGCAGGAGTGGCTaGGGAGGGTCCAAACGAGTT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMRCRSG*GGSKRV
Trigger: AACTCGTTTGGACCCTCCGCAGCCACTCCTGCACCT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGCTGGTCCAGGCGGCTaGCTGCCTCAGGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRAGPGG*LPQAQS
Trigger: ACTTTGTGCCTGAGGCAGGCAGCCGCCTGGACCAGC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAACAGCTCCTGGACGTTaGCCACGCGGAACGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERTAPGR*PRGTLW
Trigger: CCACAGCGTTCCGCGTGGGCAACGTCCAGGAGCTGT...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTGGAGTCGCCCCTGTTaGCCTTGGGACCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNWSRPC*PWDQLV
Trigger: GACCAGCTGGTCCCAAGGGCAACAGGGGCGACTCCA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATGGAGTCGCCCCTGTTaGCCTTGGGACCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRWSRPC*PWDQLV
Trigger: GACCAGCTGGTCCCAAGGGCAACAGGGGCGACTCCA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTCTGAGCTGTGGGGATaGTCTTGTGGGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSSELWG*SCGCVA
Trigger: AGCAACACACCCACAAGAGCATCCCCACAGCTCAGA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGGCAGGACAAGCGCATaGCCCACTGCTGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSGRTSA*PTAVLL
Trigger: CAATAACACAGCAGTGGGGCATGCGCTTGTCCTGCC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTGTGAGGTCTCTCCCTaGAGGCAGGACAAGCGCATG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTCEVSP*RQDKRM
Trigger: CATGCGCTTGTCCTGCCTGCAGGGAGAGACCTCACA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTAGGAAGGCCTCCAACTaGCAAATCCACAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSRKASN*QIHRMG
Trigger: ACCCATCCTGTGGATTTGGCAGTTGGAGGCCTTCCT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACATCGCTCCCTaGCGCTCTCCTGTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARVHIAP*RSPVPE
Trigger: TTCAGGGACAGGAGAGCGGCAGGGAGCGATGTGGAC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCCCTTGCATTTGGCCTaGAGGATGACTCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMPLHLA*RMTLWA
Trigger: GGCCCAGAGAGTCATCCTGCAGGCCAAATGCAAGGG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCCAGAACCTGGGCCTTaGTGGAGTAGGTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMPEPGP*WSRCPR
Trigger: CCTTGGACACCTACTCCACCAAGGCCCAGGTTCTGG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGGCTCGGAACTCAGCTaGGATGAACACCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTGSELS*DEHQGG
Trigger: TCCTCCCTGGTGTTCATCCCAGCTGAGTTCCGAGCC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTCTCGCTTGCTCTCTaGCTGAGCGAGTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSVSLAL*LSEWYF
Trigger: GAAGTACCACTCGCTCAGCCAGAGAGCAAGCGAGAC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATCTCAGGCTTACTCTaGTGCTCATCAAAACGGGAC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTISGLL*CSSKRD
Trigger: GTCCCGTTTTGATGAGCACCAGAGTAAGCCTGAGAT...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCTTCAGGTTACTTGCTaGCCCATCCACACGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSLQVTC*PIHTVR
Trigger: TCTGACCGTGTGGATGGGCCAGCAAGTAACCTGAAG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGGTAGAACTCGGGCCTaGTCCGGTCGCTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARGRTRA*SGRCTA
Trigger: TGCAGTACAGCGACCGGACCAGGCCCGAGTTCTACC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGATCACTCTCAACTGCTaGAGGTGGATAGCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILITLNC*RWIASA
Trigger: AGCACTCGCTATCCACCTCCAGCAGTTGAGAGTGAT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCTGGAGGTGCAGGAGTaGCTGCGGAGGGTCCAAACG +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQLEVQE*LRRVQT
Trigger: CGTTTGGACCCTCCGCAGCCACTCCTGCACCTCCAG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCTGACACACGCACGGTaGGCGAGCGGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSLTHAR*ASGHRC
Trigger: GCAGCGGTGGCCGCTCGCCCACCGTGCGTGTGTCAG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGCCCGATGCTGCCGATaGGCCCGCGGTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSARCCR*ARGLPS
Trigger: AGAGGGGAGACCGCGGGCCCATCGGCAGCATCGGGC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGACTGGCTGTCTTGTCCTaGGTTACCCGGGTCCCCTCG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGLAVLS*VTRVPS
Trigger: CGAGGGGACCCGGGTAACCCAGGACAAGACAGCCAG...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTTGGGTCCTCTCTCCTaGCTGTCTTGTCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSLGPLS*LSCPGL
Trigger: TAACCCAGGACAAGACAGCCAGGAGAGAGGACCCAA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCCCTGTGCACCTCTaGTCCCCTGCTCTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERGPVHL*SPALPQ
Trigger: TTGAGGGAGAGCAGGGGACCAGAGGTGCACAGGGCC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCACCAGCAGGACCAGCTaGGCCCTGTGCACCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTATSRTS*ALCTSG
Trigger: ACCAGAGGTGCACAGGGCCCAGCTGGTCCTGCTGGT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTACCTGGGTTACCCTTTaGTCCTGGGTATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSTWVTL*SWVSRE
Trigger: TTCCCTGGATACCCAGGACCAAAGGGTAACCCAGGT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCAGACTCTGCTGTTTaGATGTCAGAGCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTPDSAV*MSEPPE
Trigger: TTCAGGTGGCTCTGACATCCAAACAGCAGAGTCTGG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGTGGGTTGGTCCCCTTaGAACCAATCACACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILVGWSP*NQSHCF
Trigger: GAAACAGTGTGATTGGTTCCAAGGGGACCAACCCAC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTTGTGGCCACAGGCTTaGCAGCCACAGGTTTCGCAG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTLWPQA*QPQVSQ
Trigger: CTGCGAAACCTGTGGCTGCCAAGCCTGTGGCCACAA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTGGTTTGGCTGCCTGTaGCCTAGGGACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTWFGCL*PRDLRL
Trigger: AAGCCTGAGGTCCCTAGGCCACAGGCAGCCAAACCA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGGGCTTAGTGGTGGCTaGCTTGGTGGCAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMGLSGG*LGGSWF
Trigger: AAACCAGCTGCCACCAAGCCAGCCACCACTAAGCCC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGGAGCCCAGGAGAACTaGACGGCCTTTGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARGAQEN*TAFGGR
Trigger: TCTTCCACCAAAGGCCGTTCAGTTCTCCTGGGCTCC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCCAAATATGAACCCCTaGGCAAACCTGAAGGCGTGT +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSPNMNP*ANLKAC
Trigger: ACACGCCTTCAGGTTTGCTCAGGGGTTCATATTTGG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCAGTTGTAGGAAAGCCTaGGAGAAAGAGGCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTSCRKA*EKEAKD
Trigger: GTCTTTTGCCTCTTTCTCTCAGGCTTTCCTACAACT...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTAGCCGGCTGAACTCGTaGATAGGTTGTTACGAACAA +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTSRLNS*IGCYEQ
Trigger: TTGTTCGTAACAACCTATTCACGAGTTCAGCCGGCT...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGCCCACAAGATTGGCTaGGCCGTCAAAGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTAHKIG*AVKEEQ
Trigger: CTGTTCCTCTTTGACGGCTCAGCCAATCTTGTGGGC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGGGCTTTGCCCGTCTTaGTCTTCATTCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILGLCPS*SSFSSQ
Trigger: TTGTGAAGAGAATGAAGATCAAGACGGGCAAAGCCC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCACGTCCTTTTCACCTaGAACTGGTGCTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTHVLFT*NWCWCS
Trigger: GGAGCACCAGCACCAGTTTCAGGTGAAAAGGACGTG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGCTGGCGGACAGCGTTaGCGACGTCCTGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRAGGQR*RRPACS
Trigger: TGAACAAGCAGGACGTCGTCAACGCTGTCCGCCAGC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTCAGCTCCTCGCGGGTaGGCTGGGTCACCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSAPRG*AGSPSQ
Trigger: CTGAGAGGGTGACCCAGCTCACCCGCGAGGAGCTGA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCAACCAGCCTCTCTATaGGGGTGCGAACGTACTGGA +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMQPASL*GCERTG
Trigger: TCCAGTACGTTCGCACCCTCATAGAGAGGCTGGTTG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCAGCCCTGGAAACCTTaGGTGCCGTTCACACCAGGC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQQPWKP*VPFTPG
Trigger: GCCTGGTGTGAACGGCACTCAAGGTTTCCAGGGCTG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCGAAAGTGTCTTGGTTaGCTCCCTCAGAGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSRKCLG*LPQRCL
Trigger: TAGACACCTCTGAGGGAGTCAACCAAGACACTTTCG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGGTGATCCCCGCATCTaGGAGCTTGAGCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNGDPRI*ELEHSL
Trigger: GAGGCTGTGCTCAAGCTCTCAGATGCGGGGATCACC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGTGTCATTCCCCTGCTaGGGAAGTCCACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTVSFPC*GSPPAS
Trigger: AGAAGCTGGTGGACTTCCTCAGCAGGGGAATGACAC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGATTTGGCCTGCAGGATaGCTCTCTGGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARIWPAG*LSGPPP
Trigger: TGGAGGAGGCCCAGAGAGTCATCCTGCAGGCCAAAT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTAAGCATTTTCACTGCTaGCGAAGGATGGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSKHFHC*RRMATA
Trigger: GGCTGTTGCCATCCTTCGTCAGCAGTGAAAATGCTT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGGACTGATCATGGGCTaGGGTGACGGTGAGGTCATA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTGLIMG*GDGEVI
Trigger: TATGACCTCACCGTCACCTCAGCCCATGATCAGTCC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCGTGGTAGGTGGCTCTaGCCTGAGACCTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQRGRWL*PETSGS
Trigger: GCTACCTGAGGTCTCAGGTCAGAGCCACCTACCACG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGAGGGTCCTGAGAGGTaGCAGCAAGCCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGEGPER*QQARQH
Trigger: ATGCTGCCTGGCTTGCTGGCACCTCTCAGGACCCTC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGAAAAATGTACCTCTGTaGATAGTCCAGCGCGTAGCC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILKNVPL*IVQRVA
Trigger: GGCTACGCGCTGGACTATGCACAGAGGTACATTTTT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCTGCTTCAGGTTACTTaGTGGCCCATCCACACGGTC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMLLQVT*WPIHTV
Trigger: GACCGTGTGGATGGGCCAGCAAGTAACCTGAAGCAG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGGAGACAGCACGATCTaGTCTAACTCAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSGDSTI*SNSAGS
Trigger: AGACCCTGCTGAGTTAGAGCAGATCGTGCTGTCTCC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGGGCTCGGTAGAGGCTaGAACACCGGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSGLGRG*NTGCSL
Trigger: CAGGCTGCAGCCGGTGTTGCAGCCTCTACCGAGCCC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAGACCACGTCCCTCTTaGCACCAACACCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTARPRPS*HQHLGS
Trigger: CGAGCCCAGGTGTTGGTGGCAAGAGGGACGTGGTCT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGAGGTGGATAGCGAGTaGTGGCTAAGAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSEVDSE*WLRASG
Trigger: TCCAGAAGCTCTTAGCCAGCACTCGCTATCCACCTC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCCCCTAAACTCACAATaGCCGAGGAACGGATCACCT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSPLNSQ*PRNGSP
Trigger: AGGTGATCCGTTCCTCGGGCATTGTGAGTTTAGGGG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGTCCAGGCGGCTGCCTaGCTCAGGCACAAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRVQAAA*LRHKVV
Trigger: AACCACTTTGTGCCTGAGGCAGGCAGCCGCCTGGAC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCAGGCTCACATCCTGTaGATCTTCCACCGACTTTCC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSQAHIL*IFHRLS
Trigger: GGAAAGTCGGTGGAAGATGCACAGGATGTGAGCCTG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCCAGTGGACCGGTTCTaGCTCGTTCTCCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQPVDRF*LVLQEH
Trigger: GTGCTCCTGGAGAACGAGGCAGAACCGGTCCACTGG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGAGCTGCCGGTCTTCCTaGCTTGTAAGGAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSCRSS*LVRNKG
Trigger: CCCCTTGTTCCTTACAAGGCAGGAAGACCGGCAGCT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGCCACTCTGGCGAAGTaGTGGGAGGCCTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGATLAK*WEALGS
Trigger: AGATCCCAAGGCCTCCCAGCACTTCGCCAGAGTGGC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACCGCGTGCTGCACAACTaGCACTCTGGCGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNRVLHN*HSGEVL
Trigger: CAGCACTTCGCCAGAGTGGCAGTTGTGCAGCACGCG...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGACTCAGAGGGCGCGTaGTGCACAACTGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNDSEGA*CTTATL
Trigger: CAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGAGTC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCCTTCACAGGTGGCATaGTGGCATTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTPSQVA*WHCPRT
Trigger: AGTCCGTGGACAATGCCAGCATGCCACCTGTGAAGG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCCTTCACAGGTGGCATaGTGGCATTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMPSQVA*WHCPRT
Trigger: AGTCCGTGGACAATGCCAGCATGCCACCTGTGAAGG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTGTATTCAATGGCACTaGCTAAGGCCCTGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSCIQWH*LRPWFP
Trigger: AGGGAACCAGGGCCTTAGGCAGTGCCATTGAATACA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAGCTGCTGGCTTTGCTaGTACAGGCTTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARSCWLC*YRLRCR
Trigger: ACGGCAGCGAAGCCTGTAGCAGCAAAGCCAGCAGCT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGGGCGAGGCCGATATTaGCCAACTCCCCACCAGCAA +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNGRGRY*PTPHQQ
Trigger: TTGCTGGTGGGGAGTTGGCCAATATCGGCCTCGCCC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAGCTCCTGGGCAGGCTaGCTGATTTCATCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMSSWAG*LISSRD
Trigger: GTCCCTAGATGAAATCAGCCAGCCTGCCCAGGAGCT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCAGCATGCCTTGCAATaGGGCGGCTCGGAACTCAGC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAQHALQ*GGSELS
Trigger: GCTGAGTTCCGAGCCGCCCCATTGCAAGGCATGCTG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGGCGAAAGGTGGGAATaGCCACGGCAAAGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRGERWE*PRQSPG
Trigger: TCCCGGACTTTGCCGTGGCCATTCCCACCTTTCGCC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATCCTCGCGGGTGAGCTaGGTCACCCTCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRSSRVS*VTLSEM
Trigger: CATCTCTGAGAGGGTGACCCAGCTCACCCGCGAGGA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTCAGGCCCGGCACTTTaGGACCCATCGATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMSGPAL*DPSMRK
Trigger: CTTTCTCATCGATGGGTCCCAAAGTGCCGGGCCTGA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAGGGTGCGAACGTACTaGAACTCAGGCCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARRVRTY*NSGPAL
Trigger: AAGTGCCGGGCCTGAGTTCCAGTACGTTCGCACCCT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGGGTCATCGCTGAACTaGATGACAGCCACCCGGGTG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGGSSLN*MTATRV
Trigger: CACCCGGGTGGCTGTCATCCAGTTCAGCGATGACCC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGGGTCATCGCTGAACTaGATGACAGCCACCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRGSSLN*MTATRV
Trigger: CACCCGGGTGGCTGTCATCCAGTTCAGCGATGACCC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCTGGACACATCGTCCTaGGATTTTCCACCCAGGACC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMLDTSS*DFPPRT
Trigger: GGTCCTGGGTGGAAAATCCCAGGACGATGTGTCCAG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGGAAGAATTCGTCAGTaGGGTCAGAGTTGTACTGGA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILGRIRQ*GQSCTG
Trigger: TCCAGTACAACTCTGACCCCACTGACGAATTCTTCC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCCACGCGGAACGCTGTaGCGCTGTTGGACGCTATCT +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQPRGTL*RCWTLS
Trigger: AGATAGCGTCCAACAGCGCCACAGCGTTCCGCGTGG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTCGAGCATCTCTGGCTaGTACTCGTCAAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILSSISG*YSSKSK
Trigger: CTTTGACTTTGACGAGTACCAGCCAGAGATGCTCGA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCTTCTCGAGCATCTCTaGCTGGTACTCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSLLEHL*LVLVKV
Trigger: GACTTTGACGAGTACCAGCCAGAGATGCTCGAGAAG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTCCAGGAATACCCTTTaGCCCGATGCTGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARSRNTL*PDAADG
Trigger: CCCATCGGCAGCATCGGGCCAAAGGGTATTCCTGGA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATACTCCATCTCTCCCTaGGACACCCATGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGYSISP*DTHGAE
Trigger: CTCGGCCCCATGGGTGTCCCAGGGAGAGATGGAGTA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACCCCGATTCCTCCTTTTaGTCCTGGCTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNPDSSF*SWLSGL
Trigger: GAGCCCGGAGAGCCAGGACCAAAAGGAGGAATCGGG...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGCCCTTGGGACCAGCTaGTCCTGGGTAGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSALGTS*SWVARV
Trigger: GACCCTGGCTACCCAGGACCAGCTGGTCCCAAGGGC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCGGCCGAAAGTGTCTTaGTTGACTCCCTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTRPKVS*LTPSEV
Trigger: CACCTCTGAGGGAGTCAACCAAGACACTTTCGGCCG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGCCAAATCCACAGGATaGGTCGATGTTGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSAKSTG*VDVADV
Trigger: GACATCTGCAACATCGACCCATCCTGTGGATTTGGC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCACTCTGGCGAAGTGCTaGGAGGCCTTGGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTATLAKC*EALGSG
Trigger: CCCAGATCCCAAGGCCTCCCAGCACTTCGCCAGAGT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGCACAACTGCCACTCTaGCGAAGTGCTGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERAQLPL*RSAGRP
Trigger: AGGCCTCCCAGCACTTCGCCAGAGTGGCAGTTGTGC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTCACAGGTGGCATGCTaGCATTGTCCACGGACTCAG +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSQVAC*HCPRTQ
Trigger: CTGAGTCCGTGGACAATGCCAGCATGCCACCTGTGA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGATGCAGGATGACTCTCTaGGCCTCCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERCRMTL*ASSSCC
Trigger: GCAGCAGCTGGAGGAGGCCCAGAGAGTCATCCTGCA...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATGCAGGATGACTCTCTaGGCCTCCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRCRMTL*ASSSCC
Trigger: GCAGCAGCTGGAGGAGGCCCAGAGAGTCATCCTGCA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCGTCGTTTGGCTCACTaGCGAAGGTGTATACCTCCT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSRRLAH*RRCIPP
Trigger: AGGAGGTATACACCTTCGCCAGTGAGCCAAACGACG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGACTGCTGACGAAGGATaGCAACAGCCTCCCGAAGCG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARTADEG*QQPPEA
Trigger: CGCTTCGGGAGGCTGTTGCCATCCTTCGTCAGCAGT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTGCCCCCTGCCCGGGTaGAGTGGTTCTCCACCACGA +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSCPLPG*SGSPPR
Trigger: TCGTGGTGGAGAACCACTTCACCCGGGCAGGGGGCA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGGCTCCAAGGCCGAATaGGAACACGCTAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNGSKAE*EHASLL
Trigger: AAGCAGGCTAGCGTGTTCTCATTCGGCCTTGGAGCC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACAGTCCCAGTGCAGATaGGCCATCCACCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRQSQCR*AIHQED
Trigger: GTCTTCCTGGTGGATGGCTCATCTGCACTGGGACTG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCTTCCAGCTCAGCCTaGTCGGCACCCTTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSSSSA*SAPLFP
Trigger: TGGGAACAAGGGTGCCGATCAGGCTGAGCTGGAAGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGTCTTCCAGCTCAGCCTaGTCGGCACCCTTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQSSSSA*SAPLFP
Trigger: TGGGAACAAGGGTGCCGATCAGGCTGAGCTGGAAGA...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCATCCACACGGTCAGATaGCCTTCCTGCGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAIHTVR*PSCDQQ
Trigger: CTGCTGGTCGCAGGAAGGTCATCTGACCGTGTGGAT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGAGGGAAGCCGCTCCTaGCGCCCTCAGAGCCATCAA +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSEGSRS*RPQSHQ
Trigger: TTGATGGCTCTGAGGGCGTCAGGAGCGGCTTCCCTC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATGCTTCCCGCAGAGCTaGCCAGGATGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGCFPQS*PGCSSG
Trigger: TCCTGAGGAACATCCTGGTCAGCTCTGCGGGAAGCA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCAGACCTGTCGGCCGTaGGGACGATCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSQTCRP*GRSAAG
Trigger: CCCAGCTGCTGATCGTCCTCACGGCCGACAGGTCTG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCACCCTCTCAGAGATaGCCTGTTGGACGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSPSQR*PVGRSP
Trigger: TGGGGACCGTCCAACAGGTCATCTCTGAGAGGGTGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGATCCCCAGGGGCCTCTTaGAGATGTTCCTGGACACGT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERSPGAS*RCSWTR
Trigger: ACGTGTCCAGGAACATCTTCAAGAGGCCCCTGGGGA...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGACTTTCCAGACGAGATaGGGACCAGGAACTGCGGGA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARTFQTR*GPGTAG
Trigger: TCCCGCAGTTCCTGGTCCTCATCTCGTCTGGAAAGT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCTGAGGTCAGGGTCGTaGTGGGCGTCAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQLRSGS*WASAVS
Trigger: AGAAACTGCTGACGCCCATCACGACCCTGACCTCAG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGACTTCTGGATCTGCTCTaGGGTCAGGGTCGTGATGGG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGLLDLL*GQGRDG
Trigger: CCCATCACGACCCTGACCTCAGAGCAGATCCAGAAG...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTACTGGGGCCGATGTTaGGTCTTCGAACAATCCTGC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMYWGRC*VFEQSC
Trigger: GCAGGATTGTTCGAAGACTCAACATCGGCCCCAGTA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAATCACAAAGGCAATCTaGGGGACCCGCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRITKAI*GTRWSR
Trigger: CCTGGACCAGCGGGTCCCTCAGATTGCCTTTGTGAT...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAATCACAAAGGCAATCTaGGGGACCCGCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGITKAI*GTRWSR
Trigger: CCTGGACCAGCGGGTCCCTCAGATTGCCTTTGTGAT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCCCTGTGCATCTGGCTaGTTCTGTTCAAGATGGCGT +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTPCASG*FCSRWR
Trigger: ACGCCATCTTGAACAGAATCAGCCAGATGCACAGGG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATTCCCCTTCGGCCTCTaGTGCCTTTGGGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRFPFGL*CLWVLL
Trigger: CAACAGGACCCAAAGGCATCAGAGGCCGAAGGGGAA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTGTCATTCCCCTGCTaGGGAAGTCCACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARVSFPC*GSPPAS
Trigger: AGAAGCTGGTGGACTTCCTCAGCAGGGGAATGACAC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTAGGTGTATACCTCCTTaGTGTTCACCTTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSRCIPP*CSPSCQ
Trigger: TTGGCAGGAAGGTGAACATCAAGGAGGTATACACCT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGGCTTCACAGATGGCTaGTTTATAATAGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILGFTDG*FIIVTG
Trigger: GCCTGTGACTATTATAAATCAGCCATCTGTGAAGCC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTTCAGAACCAGGGACTaGTCATGGGCTGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARFRTRD*SWAEVT
Trigger: CGTCACCTCAGCCCATGATCAGTCCCTGGTTCTGAA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTATGTGCTGAAGCTCTaGCCTGGAGGCGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSYVLKL*PGGGLG
Trigger: GCCCAGGCCGCCTCCAGGGCAGAGCTTCAGCACATA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAAGGCCTCACAGTGTCTaGATACTGGGCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRRPHSV*ILGHCH
Trigger: GTGGCAGTGGCCCAGTATGCAGACACTGTGAGGCCT...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAGGCCTCACAGTGTCTaGATACTGGGCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTARPHSV*ILGHCH
Trigger: GTGGCAGTGGCCCAGTATGCAGACACTGTGAGGCCT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAGCAGAAGCAGGAGCTaGGGCACGTGTTCACGGATC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTASRSRS*GTCSRI
Trigger: GATCCGTGAACACGTGCCGCAGCTCCTGCTTCTGCT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGCGTTGACGACGTCCTaGTTGTTCATGTATGAATTC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILALTTS*LFMYEF
Trigger: GAATTCATACATGAACAAGCAGGACGTCGTCAACGC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTCTGCACTTCATCCTTaGTGGAATGGGCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSSALHP*WNGRSA
Trigger: TGCTGAACGCCCATTCCAGCAAGGATGAAGTGCAGA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCGCTGCACCGCGTTCTaGACTTCATCCTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARRCTAF*TSSLLE
Trigger: TTCCAGCAAGGATGAAGTGCAGAACGCGGTGCAGCG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGGACGCCCTCTTCAATaGGGCTCCCCAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSGRPLQ*GSPGAS
Trigger: AGAGGCCCCTGGGGAGCCGCATTGAAGAGGGCGTCC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACAGCTCCTCCTGGTCTaGGTTCCTGGCGATCGTGAA +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRQLLLV*VPGDRE
Trigger: TTCACGATCGCCAGGAACGCAGACCAGGAGGAGCTG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAAGAGCTTCTGGATCTaGTCTGAGGTCAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMKSFWI*SEVRVV
Trigger: CACGACCCTGACCTCAGAGCAGATCCAGAAGCTCTT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTACATCATTGCTGAACTaGACGACCCCAACTCTCACT +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSTSLLN*TTPTLT
Trigger: AGTGAGAGTTGGGGTCGTGCAGTTCAGCAATGATGT...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCAAATTCGAGAGCCTTaGCAGTGTTCAGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMQIREP*QCSVGT
Trigger: GGTCCCCACTGAACACTGGCAAGGCTCTCGAATTTG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCAAATTCGAGAGCCTTaGCAGTGTTCAGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTQIREP*QCSVGT
Trigger: GGTCCCCACTGAACACTGGCAAGGCTCTCGAATTTG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTCATTGGTGATGGTCTaGAGCTCTGTTCTGTCGATG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSSLVMV*SSVLSM
Trigger: CATCGACAGAACAGAGCTGCAGACCATCACCAATGA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGATGGCGTCAATAATCTaGCTCTTGGTAGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILMASII*LLVEKS
Trigger: GGACTTCTCTACCAAGAGGCAGATTATTGACGCCAT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTGGTTTACCCGCAGGTaGTCAAGGCCCACCTTAGTG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARWFTRR*SRPTLV
Trigger: CACTAAGGTGGGCCTTGAGCACCTGCGGGTAAACCA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTCTGCCCAGAGCACTTaGAGGGAACCCCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTASAQST*REPHSK
Trigger: CTTGCTGTGGGGTTCCCTGCAAGTGCTCTGGGCAGA...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACCCTGGAAACCTTGAGTaGCGTTCACACCAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNPGNLE*RSHQAD
Trigger: GTCCGCCTGGTGTGAACGGCACTCAAGGTTTCCAGG...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGACCAGCTGGGCCCTGTaGACCTCTGGTCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSTSWAL*TSGPLL
Trigger: GAGCAGGGGACCAGAGGTGCACAGGGCCCAGCTGGT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCTCTGCGTCCTTCACTaGCAACTCCGTCTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQLCVLH*QLRLSR
Trigger: ACGGGAGAGACGGAGTTGGCAGTGAAGGACGCAGAG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATGTGAGGTCTCTCCCTaGAGGCAGGACAAGCGCATG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRCEVSP*RQDKRM
Trigger: CATGCGCTTGTCCTGCCTGCAGGGAGAGACCTCACA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTCAGAGGGCGCGTGCTaGACAACTGCCACTCTGGCG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSEGAC*TTATLA
Trigger: CGCCAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCGCAGGGGCCGGCTTTaGAGCGGCTGGCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSRRGRL*SGWLHR
Trigger: TCTGTGAAGCCAGCCGCTGCAAAGCCGGCCCCTGCG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGAGCTGCTGGCTTTGCTaGTACAGGCTTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQSCWLC*YRLRCR
Trigger: ACGGCAGCGAAGCCTGTAGCAGCAAAGCCAGCAGCT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGGCAGCTGGTTTGGCTaGCTGTGGCCTAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSGSWFG*LWPRDL
Trigger: GAGGTCCCTAGGCCACAGGCAGCCAAACCAGCTGCC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGTCCTTGCAGGAGGCTaGAGCCCAGGAGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRVLAGG*SPGELN
Trigger: GTTCAGTTCTCCTGGGCTCCAGCCTCCTGCAAGGAC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGGCTCATCGCTAAACTaGACCACCCCCACTCGGATC +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGGSSLN*TTPTRI
Trigger: GATCCGAGTGGGGGTGGTCCAGTTTAGCGATGAGCC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCACCCTTGTTCCCAATaGCAAAGGCCATTATGCTGC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSHPCSQ*QRPLCC
Trigger: GCAGCATAATGGCCTTTGCCATTGGGAACAAGGGTG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGGCTCGGAACTCAGCTaGGATGAACACCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRGSELS*DEHQGG
Trigger: TCCTCCCTGGTGTTCATCCCAGCTGAGTTCCGAGCC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTCTGCCTTATTCGCCTaGCTAGCTCCCACACAAAAA +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSSALFA*LAPTQK
Trigger: TTTTTGTGTGGGAGCTAGCCAGGCGAATAAGGCAGA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTAATTCGGGTCCCCTCTaGCTTCACATTGAGCTCATC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSNSGPL*LHIELI
Trigger: GATGAGCTCAATGTGAAGCCAGAGGGGACCCGAATT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGACCAGCTGGCGAAAGGTaGGAATGGCCACGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGPAGER*EWPRQS
Trigger: ACTTTGCCGTGGCCATTCCCACCTTTCGCCAGCTGG...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATCAGAGATGACCTGTTaGACGGTCCCCAGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRSEMTC*TVPSWR
Trigger: TCGCCAGCTGGGGACCGTCCAACAGGTCATCTCTGA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTGGATAGCGAGTGCTaGCTAAGAGCTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSVDSEC*LRASGS
Trigger: AGATCCAGAAGCTCTTAGCCAGCACTCGCTATCCAC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCACCAGGACCAGGTGTTaGGGCACCCCGTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTATRTRC*GTPSSM
Trigger: CATAGAAGACGGGGTGCCCCAACACCTGGTCCTGGT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGAGGAACGGATCACCTaGGCGAACCTGGACACATCG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNEERIT*ANLDTS
Trigger: CGATGTGTCCAGGTTCGCCCAGGTGATCCGTTCCTC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGAGGAACGGATCACCTaGGCGAACCTGGACACATCG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYREERIT*ANLDTS
Trigger: CGATGTGTCCAGGTTCGCCCAGGTGATCCGTTCCTC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGCCTCAGGCACAAAGTaGTTTACCCGCAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARASGTK*FTRRCS
Trigger: TGAGCACCTGCGGGTAAACCACTTTGTGCCTGAGGC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTCCAGGAATACCCTTTaGCCCGATGCTGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNSRNTL*PDAADG
Trigger: CCCATCGGCAGCATCGGGCCAAAGGGTATTCCTGGA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTTCGCCCTTCTCTCCTaGGAATCCCCGAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNFALLS*ESPRAL
Trigger: AAGGGCTCTCGGGGATTCCCAGGAGAGAAGGGCGAA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTTGGGTCCTCTCTCCTaGCTGTCTTGTCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTLGPLS*LSCPGL
Trigger: TAACCCAGGACAAGACAGCCAGGAGAGAGGACCCAA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGTTCTCCTATCAGCCCTaGAGGACCAGCAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQFSYQP*RTSRTS
Trigger: GCTGGTCCTGCTGGTCCTCCAGGGCTGATAGGAGAA...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCCTCCTTTTGGTCCTaGCTCTCCGGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSSFWS*LSGLTL
Trigger: AAGGGTGAGCCCGGAGAGCCAGGACCAAAAGGAGGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCTGTCCAACTATCCCTaGAGGTCCCGAATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMLSNYP*RSRISP
Trigger: AGGGGAAATTCGGGACCTCCAGGGATAGTTGGACAG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGACTGGAACAGGGTGGTaGTCTCAGCGCTGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMTGTGW*SQRCLR
Trigger: TCTTAGACAGCGCTGAGACCACCACCCTGTTCCAGT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGACTGCTGACGAAGGATaGCAACAGCCTCCCGAAGCG +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQTADEG*QQPPEA
Trigger: CGCTTCGGGAGGCTGTTGCCATCCTTCGTCAGCAGT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGACAGTGGCCATCTTTGTaGCCACAGGCTTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGQWPSL*PQAWQP
Trigger: TGGCTGCCAAGCCTGTGGCCACAAAGATGGCCACTG...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATGGCTTCACCGCCACTaGGGGTCTAACAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRWLHRH*GSNSGH
Trigger: ATGGCCACTGTTAGACCCCCAGTGGCGGTGAAGCCA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGTGGCTTCACCGCCACTaGGGGTCTAACAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQWLHRH*GSNSGH
Trigger: ATGGCCACTGTTAGACCCCCAGTGGCGGTGAAGCCA...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGAGGCTTGGTCGCCACTaGTTTTGCAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQRLGRH*FCSSSS
Trigger: GCTGCTGCTGCTGCAAAACCAGTGGCGACCAAGCCT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAGGCTTGGTCGCCACTaGTTTTGCAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTARLGRH*FCSSSS
Trigger: GCTGCTGCTGCTGCAAAACCAGTGGCGACCAAGCCT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTGGTTTGGCTGCCTGTaGCCTAGGGACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNWFGCL*PRDLRL
Trigger: AAGCCTGAGGTCCCTAGGCCACAGGCAGCCAAACCA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGGGCTTAGTGGTGGCTaGCTTGGTGGCAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGGLSGG*LGGSWF
Trigger: AAACCAGCTGCCACCAAGCCAGCCACCACTAAGCCC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGTTATCTCAAACACCTaGACTTCACGGGACATCTTA +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTVISNT*TSRDIL
Trigger: TAAGATGTCCCGTGAAGTCCAGGTGTTTGAGATAAC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGATGCTGCTGCTGGGCATaGGTTGTAGGAAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERCCCWA*VVGKPE
Trigger: CTCAGGCTTTCCTACAACTCATGCCCAGCAGCAGCA...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAGTCTCGGATGGCATTaGAGTTGGCCAGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTASLGWH*SWPVPV
Trigger: CACTGGGACTGGCCAACTTCAATGCCATCCGAGACT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTATGACCAAGGATATCTaGCTTGGTCTGGTATGTGTT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTMTKDI*LGLVCV
Trigger: AACACATACCAGACCAAGTCAGATATCCTTGGTCAT...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGCCCACAAGATTGGCTaGGCCGTCAAAGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGAHKIG*AVKEEQ
Trigger: CTGTTCCTCTTTGACGGCTCAGCCAATCTTGTGGGC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACCACGTCCTTTTCACCTaGAACTGGTGCTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNHVLFT*NWCWCS
Trigger: GGAGCACCAGCACCAGTTTCAGGTGAAAAGGACGTG...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCTGCTTGTTCATGTATaGATTCAGGTAGAACTCGGG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSLLVHV*IQVELG
Trigger: CCCGAGTTCTACCTGAATTCATACATGAACAAGCAG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGATGGTCTGCATCTCTGTaGTGTCAGCGTTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERWSASL*CQRSRC
Trigger: GCATCGGGAACGCTGACATCACAGAGATGCAGACCA...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGTCTGCATCTCTGTaGTGTCAGCGTTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAWSASL*CQRSRC
Trigger: GCATCGGGAACGCTGACATCACAGAGATGCAGACCA...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAACTTTCCAGACGAGATaGGGACCAGGAACTGCGGGA +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRTFQTR*GPGTAG
Trigger: TCCCGCAGTTCCTGGTCCTCATCTCGTCTGGAAAGT...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCGTCTGGGGTCATTGGTaGTGGTCTGCAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAVWGHW*WSAALF
Trigger: GAACAGAGCTGCAGACCATCACCAATGACCCCAGAC...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCTTCTTCTCTGGCCGTaGAGGAGGAGGGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSLLLWP*RRRGVH
Trigger: GTGGACACCCCTCCTCCTTCACGGCCAGAGAAGAAG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCCGACTTTCCTCCCGTaGTCACAAAGGCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARPTFLP*SQRQSE
Trigger: CTCAGATTGCCTTTGTGATCACGGGAGGAAAGTCGG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACCGGCGAGGACTGTCTaGACTTGTTCAGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERPARTV*TCSGRP
Trigger: AGGTCTACCTGAACAAGTTCAGACAGTCCTCGCCGG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTCATGTCCAGTTGTCTaGCCAGGTACGCTATGTACT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSSCPVV*PGTLCT
Trigger: AGTACATAGCGTACCTGGTCAGACAACTGGACATGA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGTCAAAGGCTCCTCGTTaGGCTCGGTGGACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQSKAPR*ARWTCP
Trigger: TGGACAAGTCCACCGAGCTCAACGAGGAGCCTTTGA...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGGCTTCACAGATGGCTaGTTTATAATAGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSGFTDG*FIIVTG
Trigger: GCCTGTGACTATTATAAATCAGCCATCTGTGAAGCC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCGCGGAGGAAAACTCTTaGAGTCCTTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAAEENS*SPCRRL
Trigger: CAGCCTCCTGCAAGGACTGCAAGAGTTTTCCTCCGC...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGGTTTCAAGACAATGTaGCTTTGGGCCACGCCAACA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTGFKTM*LWATPT
Trigger: TGTTGGCGTGGCCCAAAGGCACATTGTCTTGAAACC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTGGCAAAGGCCATTATaGTGCTTCTCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSWQRPL*CFSSAP
Trigger: AGGAGCTGAAGAGAAGCAGCATAATGGCCTTTGCCA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACACAAAAAGTCAGGATaGCCGCGCGTGTCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRHKKSG*PRVSRR
Trigger: ACGCCTTGACACGCGCGGGCATCCTGACTTTTTGTG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGACAGAATGTCTCGCTTaGTCTCTGGCTGAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARTECLA*SLAERV
Trigger: CACTCGCTCAGCCAGAGAGCAAGCGAGACATTCTGT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACTGCTTCAGGTTACTTaGTGGCCCATCCACACGGTC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRLLQVT*WPIHTV
Trigger: GACCGTGTGGATGGGCCAGCAAGTAACCTGAAGCAG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGGGCACAACCCCACTCTaGTTCAGGTTACTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQGTTPL*FRLLAG
Trigger: GCCAGCAAGTAACCTGAAGCAGAGTGGGGTTGTGCC...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGCTGGTGCTCCGTTGTaGACTGATTTTAAGAGATTC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSAGAPL*TDFKRF
Trigger: GAATCTCTTAAAATCAGTGCACAACGGAGCACCAGC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTGCGTTGACGACGTCCTaGTTGTTCATGTATGAATTC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSALTTS*LFMYEF
Trigger: GAATTCATACATGAACAAGCAGGACGTCGTCAACGC...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAATGAGGACCAGGAACTaGGGGACGCCCTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGMRTRN*GTPSSM
Trigger: CATTGAAGAGGGCGTCCCGCAGTTCCTGGTCCTCAT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACATGAGGACCAGGAACTaGGGGACGCCCTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNMRTRN*GTPSSM
Trigger: CATTGAAGAGGGCGTCCCGCAGTTCCTGGTCCTCAT...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGCAGCTCCCGGAAGGTaGTCACCGAGAACACATATT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARAAPGR*SPRTHI
Trigger: AATATGTGTTCTCGGTGAGCACCTTCCGGGAGCTGC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCAGAAAGACAATGTCTaGAGCATCACTCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSQKDNV*SITLNC
Trigger: GCAGTTGAGAGTGATGCTGCAGACATTGTCTTTCTG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGAGCCAGATCTCCGTCTaGTCCATCAGTAAAATGAAT +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILSQISV*SISKMN
Trigger: ATTCATTTTACTGATGGAGCAGACGGAGATCTGGCT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGACTCAGAGGGCGCGTaGTGCACAACTGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSDSEGA*CTTATL
Trigger: CAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGAGTC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTACAGCTGCTGGCTTTaGTGCTACAGGCTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNYSCWL*CYRLRC
Trigger: GCAGCGAAGCCTGTAGCAGCAAAGCCAGCAGCTGTA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATACAGCTGCTGGCTTTaGTGCTACAGGCTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRYSCWL*CYRLRC
Trigger: GCAGCGAAGCCTGTAGCAGCAAAGCCAGCAGCTGTA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCATGAAATGATACAGTaGAAGGGAATCTACACCCGG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSHEMIQ*KGIYTR
Trigger: CCGGGTGTAGATTCCCTTGCACTGTATCATTTCATG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGGAACCTGGGCCTTGGTaGAGTAGGTGTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQEPGPW*SRCPRR
Trigger: TCTCCTTGGACACCTACTCCACCAAGGCCCAGGTTC...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCAGCATGCCTTGCAATaGGGCGGCTCGGAACTCAGC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSQHALQ*GGSELS
Trigger: GCTGAGTTCCGAGCCGCCCCATTGCAAGGCATGCTG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCGGACAACAGGGAACTaGCCCACAAGATTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQRTTGN*PTRLAE
Trigger: CTCAGCCAATCTTGTGGGCCAGTTCCCTGTTGTCCG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGAAGATCTCCAATCTTaGGAAGCGACTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTEDLQS*EATLQP
Trigger: TGGCTGCAGAGTCGCTTCCCAAGATTGGAGATCTTC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCTTTCCACCACTCTCTaGACAAACTCTTTCAACAGA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILLSTTL*TNSFNR
Trigger: TCTGTTGAAAGAGTTTGTCCAGAGAGTGGTGGAAAG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAGGACGATCAGCAGCTaGGGCACACCTTCTGTTATC +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARRTISS*GTPSVI
Trigger: GATAACAGAAGGTGTGCCCCAGCTGCTGATCGTCCT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGTGGATAGCGAGTGCTaGCTAAGAGCTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMVDSEC*LRASGS
Trigger: AGATCCAGAAGCTCTTAGCCAGCACTCGCTATCCAC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGATGTGCAAAGCCATCTaGCCTAACTCCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMMCKAI*PNSLRA
Trigger: AGCTCTGAGGGAGTTAGGCCAGATGGCTTTGCACAT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCTGGACACATCGTCCTaGGATTTTCCACCCAGGACC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQLDTSS*DFPPRT
Trigger: GGTCCTGGGTGGAAAATCCCAGGACGATGTGTCCAG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTGGACAAGCCCCACTTaGATGGAGTCGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARWTSPT*MESPSS
Trigger: TGAAGATGGCGACTCCATCCAAGTGGGGCTTGTCCA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGCCTCAGGCACAAAGTaGTTTACCCGCAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNASGTK*FTRRCS
Trigger: TGAGCACCTGCGGGTAAACCACTTTGTGCCTGAGGC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGACGCTGTGGCGCTGTTaGACGCTATCTTTCCAACCT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARTLWRC*TLSFQP
Trigger: AGGTTGGAAAGATAGCGTCCAACAGCGCCACAGCGT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTCCAGATTACAAGCTTTaGCAGCATCAGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: ESTPGASTETSWRWLTPSPDYKL*QHQLHQ
Trigger: CTGGTGTAACTGATGCTGCCAAAGCTTGTAATCTGG...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCTGACCCTGTGCATCTaGCTGATTCTGTTCAAGATG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSLTLCI*LILFKM
Trigger: CATCTTGAACAGAATCAGCCAGATGCACAGGGTCAG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGGCACGGACTCCTTCTTaGCGGAGGTTCTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQARTPS*RRFSDA
Trigger: AGCATCTGAGAACCTCCGCCAAGAAGGAGTCCGTGC...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTCCCTGGGACACCCATaGGGCCGAGGTCACCGGTTT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSSLGHP*GRGHRF
Trigger: AAACCGGTGACCTCGGCCCCATGGGTGTCCCAGGGA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGACCAGCAGGACCAGCTaGGCCCTGTGCACCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSTSRTS*ALCTSG
Trigger: ACCAGAGGTGCACAGGGCCCAGCTGGTCCTGCTGGT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGTTACCCTTTGGTCCTaGGTATCCAGGGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTVTLWS*VSRESS
Trigger: AGAGGATTCCCTGGATACCCAGGACCAAAGGGTAAC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCTGTCCAACTATCCCTaGAGGTCCCGAATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARLSNYP*RSRISP
Trigger: AGGGGAAATTCGGGACCTCCAGGGATAGTTGGACAG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGGGACCAGCTGGTCCTaGGTAGCCAGGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSGTSWS*VARVSL
Trigger: AAGGGAGACCCTGGCTACCCAGGACCAGCTGGTCCC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGGACCGACTTCCTCTTaGAGTCAGCAAACCGGATCT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARGPTSS*SQQTGS
Trigger: AGATCCGGTTTGCTGACTCCAAGAGGAAGTCGGTCC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGGAGGCCTTGGGATCTaGGCTCATGTCCAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNGGLGI*AHVQLS
Trigger: AGACAACTGGACATGAGCCCAGATCCCAAGGCCTCC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTCACAGGTGGCATGCTaGCATTGTCCACGGACTCAG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNSQVAC*HCPRTQ
Trigger: CTGAGTCCGTGGACAATGCCAGCATGCCACCTGTGA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCCACCAGCTTCTCCTTaGAGCCATAGTCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAPPASP*SHSQSG
Trigger: CCCTGACTGACTATGGCTCCAAGGAGAAGCTGGTGG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCCACCAGCTTCTCCTTaGAGCCATAGTCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQPPASP*SHSQSG
Trigger: CCCTGACTGACTATGGCTCCAAGGAGAAGCTGGTGG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGAAGAAGACGTCGTTTaGCTCACTGGCGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMEEDVV*LTGEGV
Trigger: TACACCTTCGCCAGTGAGCCAAACGACGTCTTCTTC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGGCTGGCTTCACAGATaGCTGATTTATAATAGTCAC +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILGWLHR*LIYNSH
Trigger: GTGACTATTATAAATCAGCCATCTGTGAAGCCAGCC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGGGTCTTACAGCTGCTaGCTTTGCTGCTACAGGCTT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARGSYSC*LCCYRL
Trigger: AAGCCTGTAGCAGCAAAGCCAGCAGCTGTAAGACCC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTGGTGGCTGGCTTGGTaGCAGCTGGTTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSWWLAW*QLVWLP
Trigger: AGGCAGCCAAACCAGCTGCCACCAAGCCAGCCACCA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGATCAGCCCTCTCCCAGTaGAGTTTGGCGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERSALSQ*SLALFS
Trigger: AGAGAACAGCGCCAAACTCCACTGGGAGAGGGCTGA...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCAGCCCTCTCCCAGTaGAGTTTGGCGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSALSQ*SLALFS
Trigger: AGAGAACAGCGCCAAACTCCACTGGGAGAGGGCTGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCATAAACACCAGCAGTaGCTAACTGTTACACAACAT +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTHKHQQ*LTVTQH
Trigger: ATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTATGTGGGTTTCCGTTaGACTGGACCAGAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSYVGFR*TGPEQN
Trigger: ATTTTGCTCTGGTCCAGTTCAACGGAAACCCACATA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTCCCCAGGGGCCTCTTaGAGATGTTCCTGGACACGT +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSPGAS*RCSWTR
Trigger: ACGTGTCCAGGAACATCTTCAAGAGGCCCCTGGGGA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTACTGGGGCCGATGTTaGGTCTTCGAACAATCCTGC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNYWGRC*VFEQSC
Trigger: GCAGGATTGTTCGAAGACTCAACATCGGCCCCAGTA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGGAAGACATCATTGCTaGACTGCACGACCCCAACTC +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGGRHHC*TARPQL
Trigger: GAGTTGGGGTCGTGCAGTTCAGCAATGATGTCTTCC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCTTCTTCTCTGGCCGTaGAGGAGGAGGGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSLLLWP*RRRGVH
Trigger: GTGGACACCCCTCCTCCTTCACGGCCAGAGAAGAAG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGACCGACTTTCCTCCCGTaGTCACAAAGGCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGPTFLP*SQRQSE
Trigger: CTCAGATTGCCTTTGTGATCACGGGAGGAAAGTCGG...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGCTCCATCAGTAAAATaGATGACCACCTTCACGCTG +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMAPSVK*MTTFTL
Trigger: CAGCGTGAAGGTGGTCATTCATTTTACTGATGGAGC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCGAAAGTGTCTTGGTTaGCTCCCTCAGAGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARRKCLG*LPQRCL
Trigger: TAGACACCTCTGAGGGAGTCAACCAAGACACTTTCG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAGCAAACATGACACGTaGGGACATTCTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMSKHDT*GHSPGS
Trigger: ACTTCCTGGAGAATGTCCTCACGTGTCATGTTTGCT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGATGTCCAAGCAAACATaGCACGTGAGGACATTCTCC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMMSKQT*HVRTFS
Trigger: GGAGAATGTCCTCACGTGTCATGTTTGCTTGGACAT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAGGTGTATACCTCCTTaGTGTTCACCTTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMRCIPP*CSPSCQ
Trigger: TTGGCAGGAAGGTGAACATCAAGGAGGTATACACCT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGTGGAGACTCAGAGCTaGGGAGGAAAACTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERVETQS*GGKLLQ
Trigger: CTGCAAGAGTTTTCCTCCGCAGCTCTGAGTCTCCAC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGGAGACAGCACGATCTaGTCTAACTCAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGGDSTI*SNSAGS
Trigger: AGACCCTGCTGAGTTAGAGCAGATCGTGCTGTCTCC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGACCACGTCCCTCTTaGCACCAACACCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSRPRPS*HQHLGS
Trigger: CGAGCCCAGGTGTTGGTGGCAAGAGGGACGTGGTCT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAAGAGCTTCTGGATCTaGTCTGAGGTCAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAKSFWI*SEVRVV
Trigger: CACGACCCTGACCTCAGAGCAGATCCAGAAGCTCTT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCGAGGTGGATAGCGAGTaGTGGCTAAGAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAEVDSE*WLRASG
Trigger: TCCAGAAGCTCTTAGCCAGCACTCGCTATCCACCTC...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGACATCATTGCTGAACTaGACGACCCCAACTCTCACT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMTSLLN*TTPTLT
Trigger: AGTGAGAGTTGGGGTCGTGCAGTTCAGCAATGATGT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCAGGCTCACATCCTGTaGATCTTCCACCGACTTTCC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAQAHIL*IFHRLS
Trigger: GGAAAGTCGGTGGAAGATGCACAGGATGTGAGCCTG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCGTAGGGGTGCTGGCTaGGCATGTTCCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSRRGAG*ACSGTS
Trigger: AGAAGTTCCGGAACATGCGCAGCCAGCACCCCTACG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCGCCCAAACTCCAGATaGATTAGCCGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTARPNSR*ISRSKL
Trigger: CAACTTGGAGCGGCTAATGCATCTGGAGTTTGGGCG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGACGCCCAAACTCCAGATaGATTAGCCGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGRPNSR*ISRSKL
Trigger: CAACTTGGAGCGGCTAATGCATCTGGAGTTTGGGCG...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGCAGTCTCCAGACTCTaGTGTTTGGATGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRAVSRL*CLDVRA
Trigger: GGCTCTGACATCCAAACAGCAGAGTCTGGAGACTGC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGCAGTCTCCAGACTCTaGTGTTTGGATGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNAVSRL*CLDVRA
Trigger: GGCTCTGACATCCAAACAGCAGAGTCTGGAGACTGC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCACCTTCCTGCCAATaGCCAGGACCACGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSPSCQ*PGPRRS
Trigger: ACTTCTTCGTGGTCCTGGGCATTGGCAGGAAGGTGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCCGATTTCCAGCCTCTaGATGACTTTAGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSPISSL*MTLAMK
Trigger: CTTCATTGCTAAAGTCATCCAGAGGCTGGAAATCGG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGGCCACTGCCACCTaGATAAGATCCTGTCCGATT +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAWATAT*IRSCPI
Trigger: AATCGGACAGGATCTTATCCAGGTGGCAGTGGCCCA...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGACAGTGTCTGCATACTaGGCCACTGCCACCTGGATA +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQTVSAY*ATATWI
Trigger: TATCCAGGTGGCAGTGGCCCAGTATGCAGACACTGT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAACTGGCCCACAAGATTaGCTGAGCCGTCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGTGPQD*LSRQRG
Trigger: TCCTCTTTGACGGCTCAGCCAATCTTGTGGGCCAGT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACTTCAGGTTACTTGCTaGCCCATCCACACGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERLQVTC*PIHTVR
Trigger: TCTGACCGTGTGGATGGGCCAGCAAGTAACCTGAAG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAGCCAGGATAAACGCTaGAGACAGCACGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTASQDKR*RQHDLL
Trigger: GAGCAGATCGTGCTGTCTCCAGCGTTTATCCTGGCT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGGCGAAAGGTGGGAATaGCCACGGCAAAGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSGERWE*PRQSPG
Trigger: TCCCGGACTTTGCCGTGGCCATTCCCACCTTTCGCC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGCACTTCATCCTTGCTaGAATGGGCGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNALHPC*NGRSAG
Trigger: TCCTGCTGAACGCCCATTCCAGCAAGGATGAAGTGC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCGCACTTCATCCTTGCTaGAATGGGCGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAALHPC*NGRSAG
Trigger: TCCTGCTGAACGCCCATTCCAGCAAGGATGAAGTGC...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCTGGCTAAGAGCTTCTaGATCTGCTCTGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQLAKSF*ICSEVR
Trigger: CCTGACCTCAGAGCAGATCCAGAAGCTCTTAGCCAG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCACGCTGTGGCGCTGTTaGACGCTATCTTTCCAACCT +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTATLWRC*TLSFQP
Trigger: AGGTTGGAAAGATAGCGTCCAACAGCGCCACAGCGT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCAGATGGCGTCCACCTTaGACTCGAAGCCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSRWRPP*TRSPSG
Trigger: CCCAGAAGGGCTTCGAGTCCAAGGTGGACGCCATCT...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTCCTCCTTTTGGTCCTaGCTCTCCGGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSSFWS*LSGLTL
Trigger: AAGGGTGAGCCCGGAGAGCCAGGACCAAAAGGAGGA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACAAACCGGATCTCCGTaGTCACCTCGTTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRQTGSP*SPRCCR
Trigger: CCTACAACAACGAGGTGACCACGGAGATCCGGTTTG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCGGACCGACTTCCTCTTaGAGTCAGCAAACCGGATCT +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAGPTSS*SQQTGS
Trigger: AGATCCGGTTTGCTGACTCCAAGAGGAAGTCGGTCC...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGTGGCCACAAACGACATaGCAGTCTCCAGACTCTGCT +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQWPQTT*QSPDSA
Trigger: AGCAGAGTCTGGAGACTGCCATGTCGTTTGTGGCCA...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATTCCACCTTCACAGGTaGCATGCTGGCATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRFHLHR*HAGIVH
Trigger: GTGGACAATGCCAGCATGCCACCTGTGAAGGTGGAA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACGTCGTTTGGCTCACTaGCGAAGGTGTATACCTCCT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERRRLAH*RRCIPP
Trigger: AGGAGGTATACACCTTCGCCAGTGAGCCAAACGACG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTATCTTGCACAGCTTTTaGTGTTTGGATCATAGTACC +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTILHSF*CLDHST
Trigger: GGTACTATGATCCAAACACCAAAAGCTGTGCAAGAT...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCATAAACACCAGCAGTaGCTAACTGTTACACAACAT +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTHKHQQ*LTVTQH
Trigger: ATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCCAAATATGAACCCCTaGGCAAACCTGAAGGCGTGT +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAPNMNP*ANLKAC
Trigger: ACACGCCTTCAGGTTTGCTCAGGGGTTCATATTTGG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCCTGGGCAGGCTGGCTaGTTTCATCTAGGGACTTAC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSPGQAG*FHLGTY
Trigger: GTAAGTCCCTAGATGAAATCAGCCAGCCTGCCCAGG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGATATCCCTTTTGTTTaGGTGAACTTCAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTDIPFV*VNFRGS
Trigger: GGAACCCCTGAAGTTCACTCAAACAAAAGGGATATC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATGCAGCTGCCTCAGATaGCCAAGGATATCTGACTTG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGCSCLR*PRISDL
Trigger: CAAGTCAGATATCCTTGGTCATCTGAGGCAGCTGCA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTTCACTATCTGTGGATaGAGATCTCCAATCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSFTICG*RSPILG
Trigger: TCCCAAGATTGGAGATCTTCATCCACAGATAGTGAA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCAACCAGCCTCTCTATaGGGGTGCGAACGTACTGGA +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSQPASL*GCERTG
Trigger: TCCAGTACGTTCGCACCCTCATAGAGAGGCTGGTTG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCTGAGGTCAGGGTCGTaGTGGGCGTCAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSLRSGS*WASAVS
Trigger: AGAAACTGCTGACGCCCATCACGACCCTGACCTCAG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGATGTCAGAGCCACCTaGAGGTTCTTAATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARDVRAT*RFLILS
Trigger: GGACAAGATTAAGAACCTTCAGGTGGCTCTGACATC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTACTTGTCCACTAATTTaGAGAAGACGTCGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSTCPLI*RRRRLA
Trigger: AGCCAAACGACGTCTTCTTCAAATTAGTGGACAAGT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTTGGATGTAGGACTTaGAGTAACGTTATTCGGAAC +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSVGCRT*SNVIRN
Trigger: GTTCCGAATAACGTTACTTCAAGTCCTACATCCAAC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGGACTGATCATGGGCTaGGGTGACGGTGAGGTCATA +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSGLIMG*GDGEVI
Trigger: TATGACCTCACCGTCACCTCAGCCCATGATCAGTCC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTCTTCAAGAGGTATATaGTGTTGGCCACCCACGCTT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARSSRGI*CWPPTL
Trigger: AAGCGTGGGTGGCCAACATCATATACCTCTTGAAGA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGAGAACACGCTAGCCTaGTTCAGTGCTACCACCCCG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSENTLA*FSATTP
Trigger: CGGGGTGGTAGCACTGAAGCAGGCTAGCGTGTTCTC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTGGAGTGTCACTAAATTaGACTAAACCAACACGAATA +
Preference number: 4 (lower is better)
Translates to: ARESTPGASTETSWRWLTGVSLN*TKPTRI
Trigger: TATTCGTGTTGGTTTAGTGCAATTTAGTGACACTCC...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCAGGCTTACTCTGGTaGTCATCAAAACGGGACTCC +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSGLLW*SSKRDS
Trigger: GGAGTCCCGTTTTGATGAGCACCAGAGTAAGCCTGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTGTCAGCGTTCCCGATaGCAATGCCAATGGGCACAG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSCQRSR*QCQWAQ
Trigger: CTGTGCCCATTGGCATTGGCATCGGGAACGCTGACA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTCATTGGTGATGGTCTaGAGCTCTGTTCTGTCGATG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARSLVMV*SSVLSM
Trigger: CATCGACAGAACAGAGCTGCAGACCATCACCAATGA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTGGTTTACCCGCAGGTaGTCAAGGCCCACCTTAGTG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSWFTRR*SRPTLV
Trigger: CACTAAGGTGGGCCTTGAGCACCTGCGGGTAAACCA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCCTGGAAACCTTGAGTaGCGTTCACACCAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSPGNLE*RSHQAD
Trigger: GTCCGCCTGGTGTGAACGGCACTCAAGGTTTCCAGG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAAAAGCGTTGATGAGCTaGCGGTCTTCCTGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERKALMS*RSSCLV
Trigger: TACAAGGCAGGAAGACCGGCAGCTCATCAACGCTTT...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGAAAGCGTTGATGAGCTaGCGGTCTTCCTGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQKALMS*RSSCLV
Trigger: TACAAGGCAGGAAGACCGGCAGCTCATCAACGCTTT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAAGCGCATGCCCCACTaGTGTGTTATTGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARKRMPH*CVIDLQ
Trigger: TTGCAGATCAATAACACAGCAGTGGGGCATGCGCTT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAGGATGGGTCGATGTTaGAGATGTCCAAGCAAACAT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMRMGRC*RCPSKH
Trigger: ATGTTTGCTTGGACATCTGCAACATCGACCCATCCT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGTATTCAATGGCACTaGCTAAGGCCCTGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTACIQWH*LRPWFP
Trigger: AGGGAACCAGGGCCTTAGGCAGTGCCATTGAATACA...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACATACTGATAGGTCATaGAGCAGGATGTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERHTDRS*SRMFPP
Trigger: GGGAGGGAACATCCTGCTGCATGACCTATCAGTATG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACAGTATTCGAGAGAACTaGCTGGAGACAGAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNSIREN*LETESE
Trigger: CTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACT...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGACTTTACATTTGCCTaGAACAGGCATAACATGAAA +
Preference number: 4 (lower is better)
Translates to: RTAWRQRARVHRHISTILDFTFA*NRHNMK
Trigger: TTTCATGTTATGCCTGTTGCAGGCAAATGTAAAGTC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGGGTTTCCGTTGAACTaGACCAGAGCAAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTGFPLN*TRAKWK
Trigger: TTTCCATTTTGCTCTGGTCCAGTTCAACGGAAACCC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACAGGAACTCGGTATGTaGGTTTCCGTTGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERQELGM*VSVELD
Trigger: GTCCAGTTCAACGGAAACCCACATACCGAGTTCCTG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCCTGCCCGGGTGAAGTaGTTCTCCACCACGAAATCA +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSPARVK*FSTTKS
Trigger: TGATTTCGTGGTGGAGAACCACTTCACCCGGGCAGG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAATTCGGGTCCCCTCTaGCTTCACATTGAGCTCATC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTANSGPL*LHIELI
Trigger: GATGAGCTCAATGTGAAGCCAGAGGGGACCCGAATT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGAAGATCTCCAATCTTaGGAAGCGACTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDREREDLQS*EATLQP
Trigger: TGGCTGCAGAGTCGCTTCCCAAGATTGGAGATCTTC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGGGTGCGAACGTACTaGAACTCAGGCCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSRVRTY*NSGPAL
Trigger: AAGTGCCGGGCCTGAGTTCCAGTACGTTCGCACCCT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTTCACCAGCTCCTCCTaGTCTGCGTTCCTGGCGATC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSFTSSS*SAFLAI
Trigger: GATCGCCAGGAACGCAGACCAGGAGGAGCTGGTGAA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACATCACTCTCAACTGCTaGAGGTGGATAGCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNITLNC*RWIASA
Trigger: AGCACTCGCTATCCACCTCCAGCAGTTGAGAGTGAT...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAATGTGCAAAGCCATCTaGCCTAACTCCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGMCKAI*PNSLRA
Trigger: AGCTCTGAGGGAGTTAGGCCAGATGGCTTTGCACAT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTTTCAGATAGAATTCTaGGAAGACATCATTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FERTAWRQRARVHRHISTFQIEF*EDIIAE
Trigger: TTCAGCAATGATGTCTTCCCAGAATTCTATCTGAAA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAAACGAAGCACTTCCTaGAAACTGTCCCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARKRSTS*KLSLLK
Trigger: CTTCAGGAGGGACAGTTTCCAGGAAGTGCTTCGTTT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGGACTCGAAGCCCTTCTaGGCCACAAAAACATTCTGG +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQDSKPF*ATKTFW
Trigger: CCAGAATGTTTTTGTGGCCCAGAAGGGCTTCGAGTC...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGGGCACATTGATCGATaGAGTCGCCCCTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSGHIDR*SRPCCP
Trigger: AGGGCAACAGGGGCGACTCCATCGATCAATGTGCCC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGCCAAATCCACAGGATaGGTCGATGTTGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGAKSTG*VDVADV
Trigger: GACATCTGCAACATCGACCCATCCTGTGGATTTGGC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGGAGGCCTTGGGATCTaGGCTCATGTCCAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSGGLGI*AHVQLS
Trigger: AGACAACTGGACATGAGCCCAGATCCCAAGGCCTCC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCTATGGTGTATTCAATaGCACTGCCTAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTALWCIQ*HCLRPW
Trigger: CCAGGGCCTTAGGCAGTGCCATTGAATACACCATAG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGTGGGTTGGTCCCCTTaGAACCAATCACACTGTTTC +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERVGWSP*NQSHCF
Trigger: GAAACAGTGTGATTGGTTCCAAGGGGACCAACCCAC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
3UTR CAA 72 bp GGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTaGTTTCTCCACGATACACAGGCTTCCCATCTAAAG +
Preference number: 4 (lower is better)
Translates to: GKLGAGNEKVGL*FLHDTQASHLK
Trigger: CTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.7
ENST00000353578.8
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGTCTCGGATGGCATTaGAGTTGGCCAGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSSLGWH*SWPVPV
Trigger: CACTGGGACTGGCCAACTTCAATGCCATCCGAGACT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTCCGCACAGCGGTTATaGCTTCCCTTTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNSAQRL*LPFLLD
Trigger: ATCCAACAAAAAGGGAAGTCATAACCGCTGTGCGGA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTCCGCACAGCGGTTATaGCTTCCCTTTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTASAQRL*LPFLLD
Trigger: ATCCAACAAAAAGGGAAGTCATAACCGCTGTGCGGA...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACAGCCGGCTGAACTCGTaGATAGGTTGTTACGAACAA +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNSRLNS*IGCYEQ
Trigger: TTGTTCGTAACAACCTATTCACGAGTTCAGCCGGCT...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCAACGGGACTCCACCTTaGCATCATCGCTGTACTGAG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSNGTPP*HHRCTE
Trigger: CTCAGTACAGCGATGATGTCAAGGTGGAGTCCCGTT...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGCTTTGCCCGTCTTaGTCTTCATTCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERGLCPS*SSFSSQ
Trigger: TTGTGAAGAGAATGAAGATCAAGACGGGCAAAGCCC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCGGCAAAGTCCGGGATaGAGGAGATGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSRQSPG*RRWSAS
Trigger: AGATGCAGACCATCTCCTTCATCCCGGACTTTGCCG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAGCAAACATGACACGTaGGGACATTCTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTASKHDT*GHSPGS
Trigger: ACTTCCTGGAGAATGTCCTCACGTGTCATGTTTGCT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGACTTGTCCACTAATTTaGAGAAGACGTCGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMTCPLI*RRRRLA
Trigger: AGCCAAACGACGTCTTCTTCAAATTAGTGGACAAGT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCTTCAAGAGGTATATaGTGTTGGCCACCCACGCTT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSSRGI*CWPPTL
Trigger: AAGCGTGGGTGGCCAACATCATATACCTCTTGAAGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGTGGAGACTCAGAGCTaGGGAGGAAAACTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSVETQS*GGKLLQ
Trigger: CTGCAAGAGTTTTCCTCCGCAGCTCTGAGTCTCCAC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGGACTCACGGATGAATaGACACAGGACACTAAGTTT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARGLTDE*TQDTKF
Trigger: AAACTTAGTGTCCTGTGTGCATTCATCCGTGAGTCC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAAAAATGTACCTCTGTaGATAGTCCAGCGCGTAGCC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAKNVPL*IVQRVA
Trigger: GGCTACGCGCTGGACTATGCACAGAGGTACATTTTT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGAGCCAGATCTCCGTCTaGTCCATCAGTAAAATGAAT +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSQISV*SISKMN
Trigger: ATTCATTTTACTGATGGAGCAGACGGAGATCTGGCT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAAGCGCATGCCCCACTaGTGTGTTATTGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAKRMPH*CVIDLQ
Trigger: TTGCAGATCAATAACACAGCAGTGGGGCATGCGCTT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTCCATACCAGAATCTTaGACAGCTTTTGGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMSIPES*TAFGVW
Trigger: CCAAACACCAAAAGCTGTGCAAGATTCTGGTATGGA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTAACTCTCGAACAAGTTaGAAATGTTCCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSNSRTS*KCSSPM
Trigger: CATTGGAGAGGAACATTTCCAACTTGTTCGAGAGTT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGGCAGTAATTTCTCCTaGAGGTCCCCAAAGCTACGG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSGSNFS*RSPKLR
Trigger: CCGTAGCTTTGGGGACCTCCAGGAGAAATTACTGCC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACAAGACAATGTGCCTTTaGGCCACGCCAACAATGTAC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNKTMCL*ATPTMY
Trigger: GTACATTGTTGGCGTGGCCCAAAGGCACATTGTCTT...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCGCGTGTCAAGGCGTTaGCAGCTTGCAAATAGGAGT +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSRVSRR*QLANRS
Trigger: ACTCCTATTTGCAAGCTGCCAACGCCTTGACACGCG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCGGACAACAGGGAACTaGCCCACAAGATTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSRTTGN*PTRLAE
Trigger: CTCAGCCAATCTTGTGGGCCAGTTCCCTGTTGTCCG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAATCTCAGGCTTACTCTaGTGCTCATCAAAACGGGAC +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRISGLL*CSSKRD
Trigger: GTCCCGTTTTGATGAGCACCAGAGTAAGCCTGAGAT...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCAGCCAGGATAAACGCTaGAGACAGCACGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSQDKR*RQHDLL
Trigger: GAGCAGATCGTGCTGTCTCCAGCGTTTATCCTGGCT...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTCAGGCCCGGCACTTTaGGACCCATCGATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSSGPAL*DPSMRK
Trigger: CTTTCTCATCGATGGGTCCCAAAGTGCCGGGCCTGA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAAAACGAAGCACTTCCTaGAAACTGTCCCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGKRSTS*KLSLLK
Trigger: CTTCAGGAGGGACAGTTTCCAGGAAGTGCTTCGTTT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACAAGCCCCACTTGGATaGAGTCGCCATCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERQAPLG*SRHLHK
Trigger: TTTATGAAGATGGCGACTCCATCCAAGTGGGGCTTG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACAAGCCCCACTTGGATaGAGTCGCCATCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRQAPLG*SRHLHK
Trigger: TTTATGAAGATGGCGACTCCATCCAAGTGGGGCTTG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAAGAATTCGTCAGTaGGGTCAGAGTTGTACTGGA +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERGRIRQ*GQSCTG
Trigger: TCCAGTACAACTCTGACCCCACTGACGAATTCTTCC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACCTGACCCTGTGCATCTaGCTGATTCTGTTCAAGATG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNLTLCI*LILFKM
Trigger: CATCTTGAACAGAATCAGCCAGATGCACAGGGTCAG...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGAGTTGCTCTCAGCAATaGTCAGGTCATTCACAATAC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSCSQQ*SGHSQY
Trigger: GTATTGTGAATGACCTGACCATTGCTGAGAGCAACT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAATTTTCAGGTCCCGTaGGTTTGGGGCACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARNFQVP*VWGTFK
Trigger: TTTGAAAGTGCCCCAAACCCACGGGACCTGAAAATT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGTTATCTCAAACACCTaGACTTCACGGGACATCTTA +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMVISNT*TSRDIL
Trigger: TAAGATGTCCCGTGAAGTCCAGGTGTTTGAGATAAC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACTCTCCCAGTGGAGTTTaGCGCTGTTCTCTGTTATCT +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNSPSGV*RCSLLS
Trigger: AGATAACAGAGAACAGCGCCAAACTCCACTGGGAGA...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCGAGACAAGTTGGCGATaGCTGACTCCTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAETSWR*LTPSSS
Trigger: TGAAGAAGAAGGAGTCAGCCATCGCCAACTTGTCTC...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGATCTACAGAGACAAGTTaGCGATGGCTGACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERSTETS*RWLTPS
Trigger: AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGA...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCTACAGAGACAAGTTaGCGATGGCTGACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSTETS*RWLTPS
Trigger: AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAGTTGTAGGAAAGCCTaGGAGAAAGAGGCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTASCRKA*EKEAKD
Trigger: GTCTTTTGCCTCTTTCTCTCAGGCTTTCCTACAACT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTTCCAGCAGCCTTGGTaGGGTGGCTTTGCATTATGT +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSFQQPW*GGFALC
Trigger: ACATAATGCAAAGCCACCTCACCAAGGCTGCTGGAA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTCTTGGCTTGGAAGATaGAAGGCACAACCCCACTCT +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSWLGR*KAQPHS
Trigger: AGAGTGGGGTTGTGCCTTTCATCTTCCAAGCCAAGA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACTGCTTGTTCATGTATaGATTCAGGTAGAACTCGGG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRLLVHV*IQVELG
Trigger: CCCGAGTTCTACCTGAATTCATACATGAACAAGCAG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAATCACACTGTTTCCTaGTATCTGGGGACAAGTAAA +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMNHTVS*YLGTSK
Trigger: TTTACTTGTCCCCAGATATCAGGAAACAGTGTGATT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCGAGATTTCTTTGTACTaGAACTTCCGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAEISLY*NFRGRW
Trigger: CCACCTACCACGGAAGTTTCAGTACAAAGAAATCTC...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGAGATTTCTTTGTACTaGAACTTCCGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYREISLY*NFRGRW
Trigger: CCACCTACCACGGAAGTTTCAGTACAAAGAAATCTC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGTCAGCAGAGTCTTGTaGTGTGATGTCTTTAAGGGT +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRVSRVL*CDVFKG
Trigger: ACCCTTAAAGACATCACAGCACAAGACTCTGCTGAC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGAAGTCGAGAATGACTaGGAAATTGACACTTCCGGT +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNEVEND*EIDTSG
Trigger: ACCGGAAGTGTCAATTTCGCAGTCATTCTCGACTTC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTGCATACTGGGCCACTaGCACCTGGATAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSCILGH*HLDKIL
Trigger: CAGGATCTTATCCAGGTGGCAGTGGCCCAGTATGCA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCGCTGGTGCTCCGTTGTaGACTGATTTTAAGAGATTC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAAGAPL*TDFKRF
Trigger: GAATCTCTTAAAATCAGTGCACAACGGAGCACCAGC...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTCTGCACTTCATCCTTaGTGGAATGGGCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSALHP*WNGRSA
Trigger: TGCTGAACGCCCATTCCAGCAAGGATGAAGTGCAGA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGAACAAAGAGGTTTCTTaGCACAAATTCGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTNKEVS*HKFESL
Trigger: AAGGCTCTCGAATTTGTGGCAAGAAACCTCTTTGTT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGGGCAAAGGGTTTCATaGATCGCATCATGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRGQRVS*IASCKV
Trigger: AACTTTGCATGATGCGATGCATGAAACCCTTTGCCC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCTGCAGCTGACCCTGTaGATCTGGCTGATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSLQLTL*IWLILF
Trigger: GAACAGAATCAGCCAGATGCACAGGGTCAGCTGCAG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAAGGATGGGTCGATGTTaGAGATGTCCAAGCAAACAT +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRRMGRC*RCPSKH
Trigger: ATGTTTGCTTGGACATCTGCAACATCGACCCATCCT...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGGAAGGCCTCCAACTaGCAAATCCACAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSRKASN*QIHRMG
Trigger: ACCCATCCTGTGGATTTGGCAGTTGGAGGCCTTCCT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTCACCTTCCTGCCAATaGCCAGGACCACGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSSPSCQ*PGPRRS
Trigger: ACTTCTTCGTGGTCCTGGGCATTGGCAGGAAGGTGA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTCCATACCAGAATCTTaGACAGCTTTTGGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARSIPES*TAFGVW
Trigger: CCAAACACCAAAAGCTGTGCAAGATTCTGGTATGGA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCAGTATTCGAGAGAACTaGCTGGAGACAGAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSIREN*LETESE
Trigger: CTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACT...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGACTTTACATTTGCCTaGAACAGGCATAACATGAAA +
Preference number: 4 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSDFTFA*NRHNMK
Trigger: TTTCATGTTATGCCTGTTGCAGGCAAATGTAAAGTC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAATGTTCCTCTCCAATaGTCCAAGAGGAATCCACTA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARNVPLQ*SKRNPL
Trigger: TAGTGGATTCCTCTTGGACCATTGGAGAGGAACATT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCTTTTCCAGTCTGATTaGTTCCCCCAATATAAGACA +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTLFQSD*FPQYKT
Trigger: TGTCTTATATTGGGGGAACCAATCAGACTGGAAAAG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACCCGATTTCCAGCCTCTaGATGACTTTAGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNPISSL*MTLAMK
Trigger: CTTCATTGCTAAAGTCATCCAGAGGCTGGAAATCGG...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTGGGCCACTGCCACCTaGATAAGATCCTGTCCGATT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSWATAT*IRSCPI
Trigger: AATCGGACAGGATCTTATCCAGGTGGCAGTGGCCCA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCACCCTTGTTCCCAATaGCAAAGGCCATTATGCTGC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSHPCSQ*QRPLCC
Trigger: GCAGCATAATGGCCTTTGCCATTGGGAACAAGGGTG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGAGATACACCAGGCTTaGGTTAAAAGCAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGEIHQA*VKSNLL
Trigger: GAGCAGATTGCTTTTAACCCAAGCCTGGTGTATCTC...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGGGTCAGAGTTGTACTaGACAAGCCCCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSGSELY*TSPTWM
Trigger: CATCCAAGTGGGGCTTGTCCAGTACAACTCTGACCC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACCAGATTACAAGCTTTaGCAGCATCAGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRPDYKL*QHQLHQ
Trigger: CTGGTGTAACTGATGCTGCCAAAGCTTGTAATCTGG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCAAACCGGATCTCCGTaGTCACCTCGTTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSQTGSP*SPRCCR
Trigger: CCTACAACAACGAGGTGACCACGGAGATCCGGTTTG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTGGCCACAAACGACATaGCAGTCTCCAGACTCTGCT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSWPQTT*QSPDSA
Trigger: AGCAGAGTCTGGAGACTGCCATGTCGTTTGTGGCCA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGTTCATCTCATTGAACTaGAACAGGGTGGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQFISLN*NRVVVS
Trigger: TGAGACCACCACCCTGTTCCAGTTCAATGAGATGAA...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATTCATCTCATTGAACTaGAACAGGGTGGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRFISLN*NRVVVS
Trigger: TGAGACCACCACCCTGTTCCAGTTCAATGAGATGAA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCAAAGACATTCTCTATaGTGTATTCAATGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTQRHSL*CIQWHC
Trigger: GCAGTGCCATTGAATACACCATAGAGAATGTCTTTG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCAAAGACATTCTCTATaGTGTATTCAATGGCACTGC +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMQRHSL*CIQWHC
Trigger: GCAGTGCCATTGAATACACCATAGAGAATGTCTTTG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGAAGAAGACGTCGTTTaGCTCACTGGCGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSEEDVV*LTGEGV
Trigger: TACACCTTCGCCAGTGAGCCAAACGACGTCTTCTTC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTCACAAGGTTCTTTGTaGGTTGGTCCCCTTGGAACC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSQGSL*VGPLGT
Trigger: GGTTCCAAGGGGACCAACCCACAAAGAACCTTGTGA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGGGTCTTACAGCTGCTaGCTTTGCTGCTACAGGCTT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSGSYSC*LCCYRL
Trigger: AAGCCTGTAGCAGCAAAGCCAGCAGCTGTAAGACCC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGACTCCAGAGGGAATTTaGATTGATAGGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTTPEGI*IDRNVH
Trigger: GTGAACATTCCTATCAATCCAAATTCCCTCTGGAGT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTTGTTGGATGGGTATTaGAATAAAATTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMLLDGY*NKIQAS
Trigger: TGAGGCCTGAATTTTATTTCAATACCCATCCAACAA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTTCACTATCTGTGGATaGAGATCTCCAATCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTAFTICG*RSPILG
Trigger: TCCCAAGATTGGAGATCTTCATCCACAGATAGTGAA...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTCATGTCCAGTTGTCTaGCCAGGTACGCTATGTACT +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSCPVV*PGTLCT
Trigger: AGTACATAGCGTACCTGGTCAGACAACTGGACATGA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAATCAAAGCATGAAATaGTACAGTGCAAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMNQSMK*YSARES
Trigger: AGATTCCCTTGCACTGTATCATTTCATGCTTTGATT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTCTAGGTTGAACATATaGATATTGAGCGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMSRLNI*ILSGSL
Trigger: AAGTGAACCGCTCAATATGCATATGTTCAACCTAGA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGGGTTAAAAGCAATCTaGTCAAGCTCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNGLKAI*SSSALF
Trigger: GAATAAGGCAGAGCTTGAGCAGATTGCTTTTAACCC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGACAGAATGTCTCGCTTaGTCTCTTCAGGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSTECLA*SLQGFQ
Trigger: CTGGAACCCCTGAAGAGAGCAAGCGAGACATTCTGT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472056.5
CDS-3UTR CCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCTGCTGAGTTCCAATTaGGAGTTTCTCAAGGAGATT +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTALLSSN*EFLKEI
Trigger: AATCTCCTTGAGAAACTCCCAATTGGAACTCAGCAG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTGGTTTTTCCAACGTTaGCTGATCCATCCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARWFFQR*LIHPKE
Trigger: TTCTTTTGGATGGATCAGCCAACGTTGGAAAAACCA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGCACATAAGGGAAATTaGTTTTTCCAACGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNAHKGN*FFQRWL
Trigger: CAGCCAACGTTGGAAAAACCAATTTCCCTTATGTGC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACCTTTCCACCACTCTCTaGACAAACTCTTTCAACAGA +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNLSTTL*TNSFNR
Trigger: TCTGTTGAAAGAGTTTGTCCAGAGAGTGGTGGAAAG...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGACTCGAAGCCCTTCTaGGCCACAAAAACATTCTGG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSDSKPF*ATKTFW
Trigger: CCAGAATGTTTTTGTGGCCCAGAAGGGCTTCGAGTC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCTCGAGCATCTCTGGCTaGTACTCGTCAAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSSISG*YSSKSK
Trigger: CTTTGACTTTGACGAGTACCAGCCAGAGATGCTCGA...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGTTACCCTTTGGTCCTaGGTATCCAGGGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSVTLWS*VSRESS
Trigger: AGAGGATTCCCTGGATACCCAGGACCAAAGGGTAAC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCTATGGTGTATTCAATaGCACTGCCTAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSLWCIQ*HCLRPW
Trigger: CCAGGGCCTTAGGCAGTGCCATTGAATACACCATAG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTCACAAGGTTCTTTGTaGGTTGGTCCCCTTGGAACC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSSQGSL*VGPLGT
Trigger: GGTTCCAAGGGGACCAACCCACAAAGAACCTTGTGA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGGCTGGCTTCACAGATaGCTGATTTATAATAGTCAC +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNGWLHR*LIYNSH
Trigger: GTGACTATTATAAATCAGCCATCTGTGAAGCCAGCC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGAGACAAGTTGGCGATaGCTGACTCCTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSETSWR*LTPSSS
Trigger: TGAAGAAGAAGGAGTCAGCCATCGCCAACTTGTCTC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGATGTCAGAGCCACCTaGAGGTTCTTAATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSDVRAT*RFLILS
Trigger: GGACAAGATTAAGAACCTTCAGGTGGCTCTGACATC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGATGTCCAAGCAAACATaGCACGTGAGGACATTCTCC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSMSKQT*HVRTFS
Trigger: GGAGAATGTCCTCACGTGTCATGTTTGCTTGGACAT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAAATCACACTGTTTCCTaGTATCTGGGGACAAGTAAA +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGNHTVS*YLGTSK
Trigger: TTTACTTGTCCCCAGATATCAGGAAACAGTGTGATT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGCCACTAAGGGCAAGTaGCGATGTTTCCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSATKGK*RCFLIL
Trigger: CAAAATGAGGAAACATCGGCACTTGCCCTTAGTGGC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGACCATTTTTGACATCTaGTTGCTGCTGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSTIFDI*LLLLGM
Trigger: CATGCCCAGCAGCAGCAAGCAGATGTCAAAAATGGT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR GCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCAGAAAGACAATGTCTaGAGCATCACTCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSQKDNV*SITLNC
Trigger: GCAGTTGAGAGTGATGCTGCAGACATTGTCTTTCTG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTCATGCATCGCATCATaGAAAGTTTCCAAAACTTGC +
Preference number: 4 (lower is better)
Translates to: TPAVANCYTTFKVFERTASCIAS*KVSKTC
Trigger: GCAAGTTTTGGAAACTTTGCATGATGCGATGCATGA...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGTCATGCATCGCATCATaGAAAGTTTCCAAAACTTGC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQSCIAS*KVSKTC
Trigger: GCAAGTTTTGGAAACTTTGCATGATGCGATGCATGA...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTCTGCGTTCTTGGCTTaGAAGATGAAAGGCACAACC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSSAFLA*KMKGTT
Trigger: GGTTGTGCCTTTCATCTTCCAAGCCAAGAACGCAGA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTTTCAGATAGAATTCTaGGAAGACATCATTGCTGAA +
Preference number: 4 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMFQIEF*EDIIAE
Trigger: TTCAGCAATGATGTCTTCCCAGAATTCTATCTGAAA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCAATTTTCAGGTCCCGTaGGTTTGGGGCACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSNFQVP*VWGTFK
Trigger: TTTGAAAGTGCCCCAAACCCACGGGACCTGAAAATT...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCTGTTTCCTGATATCTaGGGACAAGTAAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: CYTTFKVFERTAWRQRARLFPDI*GQVKSI
Trigger: AATGCTTTTTACTTGTCCCCAGATATCAGGAAACAG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTCTCCCAGTGGAGTTTaGCGCTGTTCTCTGTTATCT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSSPSGV*RCSLLS
Trigger: AGATAACAGAGAACAGCGCCAAACTCCACTGGGAGA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGATCTTGCACAGCTTTTaGTGTTTGGATCATAGTACC +
Preference number: 4 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQILHSF*CLDHST
Trigger: GGTACTATGATCCAAACACCAAAAGCTGTGCAAGAT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAACTTCCGGTGTTGTTTaGTCCATCAATAAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERTSGVV*SINKEN
Trigger: ATTTTCCTTATTGATGGATCAAACAACACCGGAAGT...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATTGTTGGATGGGTATTaGAATAAAATTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGLLDGY*NKIQAS
Trigger: TGAGGCCTGAATTTTATTTCAATACCCATCCAACAA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAACATTTACTTGTTTGTaGCCAAACTTCACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERTFTCL*PNFTRF
Trigger: GAACCTTGTGAAGTTTGGTCACAAACAAGTAAATGT...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACAATCAAAGCATGAAATaGTACAGTGCAAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNNQSMK*YSARES
Trigger: AGATTCCCTTGCACTGTATCATTTCATGCTTTGATT...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGGGCAAAGGGTTTCATaGATCGCATCATGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSGQRVS*IASCKV
Trigger: AACTTTGCATGATGCGATGCATGAAACCCTTTGCCC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACAAGGATATCTGACTTaGTCTGGTATGTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRQGYLT*SGMCLK
Trigger: CTTTAAACACATACCAGACCAAGTCAGATATCCTTG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACTGTTTCCTGATATCTaGGGACAAGTAAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: TVTQHSKYSRELPGDRERLFPDI*GQVKSI
Trigger: AATGCTTTTTACTTGTCCCCAGATATCAGGAAACAG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR TCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGTTGGATGTAGGACTTaGAGTAACGTTATTCGGAAC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSVGCRT*SNVIRN
Trigger: GTTCCGAATAACGTTACTTCAAGTCCTACATCCAAC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTTGTGTGACAATGGTTaGCGGTTTCAAGACAATGTG +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSLCDNG*RFQDNV
Trigger: CACATTGTCTTGAAACCGCCAACCATTGTCACACAA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR TCA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCACATTTACTTGTTTGTaGCCAAACTTCACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: HETPEGIWIDRNVHINTSTFTCL*PNFTRF
Trigger: GAACCTTGTGAAGTTTGGTCACAAACAAGTAAATGT...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR GCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGATCCTCAACTCCAATTaGAAACACGTTAACATCAGC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSILNSN*KHVNIS
Trigger: GCTGATGTTAACGTGTTTGCAATTGGAGTTGAGGAT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CCA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGACTCCAGAGGGAATTTaGATTGATAGGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSTPEGI*IDRNVH
Trigger: GTGAACATTCCTATCAATCCAAATTCCCTCTGGAGT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp AAAGTCAAAGGCCTCCACCGGGCCCGAGGGCGTGTTGGCCACCACTaGCACACGCACGGTGGGCGAGCGGCCACCGCTGCAGCTGACCCT +
Preference number: 5 (lower is better)
Translates to: KVKGLHRARGRVGHH*HTHGGRAATAAADP
Trigger: AGGGTCAGCTGCAGCGGTGGCCGCTCGCCCACCGTGCGTGTGTCAGTGGTGGCCAACACGCCCTCGGGCCCGGTGGAGGCCTTTGACTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp GGTACTCGTCAAAGTCAAAGGCCTCCACCGGGCCCGAGGGCGTGTTaGCCACCACTGACACACGCACGGTGGGCGAGCGGCCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: GTRQSQRPPPGPRAC*PPLTHARWASGHRC
Trigger: GCAGCGGTGGCCGCTCGCCCACCGTGCGTGTGTCAGTGGTGGCCAACACGCCCTCGGGCCCGGTGGAGGCCTTTGACTTTGACGAGTACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS TCA 90 bp CGAGAGCCCTTTACTCCTCTCTGGCCCGGGCAGCCCTGGAAACCTTaGGTGCCGTTCACACCAGGCGGACCACGCTCACCGGGTCCACCC +
Preference number: 5 (lower is better)
Translates to: REPFTPLWPGQPWKP*VPFTPGGPRSPGPP
Trigger: GGGTGGACCCGGTGAGCGTGGTCCGCCTGGTGTGAACGGCACTCAAGGTTTCCAGGGCTGCCCGGGCCAGAGAGGAGTAAAGGGCTCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp GTCCTGGCTCTCCGGGCTCACCCTTTCTTCCCAGTGGACCGGTTCTaGCTCGTTCTCCAGGAGCACCAGCGGCACCTCCGCTTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: VLALRAHPFFPVDRF*LVLQEHQRHLRFPE
Trigger: CTCGGGGAAGCGGAGGTGCCGCTGGTGCTCCTGGAGAACGAGGCAGAACCGGTCCACTGGGAAGAAAGGGTGAGCCCGGAGAGCCAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
CDS CCA 90 bp GGCTGCAACACCGGCTGCAGCCTGCTCAGCTCCTCGCGGGTGAGCTaGGTCACCCTCTCAGAGATGACCTGTTGGACGGTCCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GCNTGCSLLSSSRVS*VTLSEMTCWTVPSW
Trigger: CCAGCTGGGGACCGTCCAACAGGTCATCTCTGAGAGGGTGACCCAGCTCACCCGCGAGGAGCTGAGCAGGCTGCAGCCGGTGTTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp CTCTTGCCACCAACACCTGGGCTCGGTAGAGGCTGCAACACCGGCTaGAGCCTGCTCAGCTCCTCGCGGGTGAGCTGGGTCACCCTCTCA +
Preference number: 5 (lower is better)
Translates to: LLPPTPGLGRGCNTG*SLLSSSRVSWVTLS
Trigger: TGAGAGGGTGACCCAGCTCACCCGCGAGGAGCTGAGCAGGCTGCAGCCGGTGTTGCAGCCTCTACCGAGCCCAGGTGTTGGTGGCAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS CCA 90 bp CGAATCTCGTCACTAGAAGGCCCGGCACTTATGAGGACCAGCACCTaGGGAACCCCTTCCTCCACGCGGCTGCCCCCTGCCCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RISSLEGPALMRTST*GTPSSTRLPPARVK
Trigger: CTTCACCCGGGCAGGGGGCAGCCGCGTGGAGGAAGGGGTTCCCCAGGTGCTGGTCCTCATAAGTGCCGGGCCTTCTAGTGACGAGATTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392004.7
ENST00000433762.1
ENST00000491233.1
CDS GCA 90 bp ATACCCTTTGGCCCGATGCTGCCGATGGGCCCGCGGTCTCCCCTCTaGCCAGAGCACTTGCAGGGAACCCCACAGCAAGCTTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: IPFGPMLPMGPRSPL*PEHLQGTPQQAFSA
Trigger: TGCCGAGAAAGCTTGCTGTGGGGTTCCCTGCAAGTGCTCTGGGCAGAGGGGAGACCGCGGGCCCATCGGCAGCATCGGGCCAAAGGGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp AGCCCTTTACTCCTCTCTGGCCCGGGCAGCCCTGGAAACCTTGAGTaGCGTTCACACCAGGCGGACCACGCTCACCGGGTCCACCCTCAT +
Preference number: 5 (lower is better)
Translates to: SPLLLSGPGSPGNLE*RSHQADHAHRVHPH
Trigger: ATGAGGGTGGACCCGGTGAGCGTGGTCCGCCTGGTGTGAACGGCACTCAAGGTTTCCAGGGCTGCCCGGGCCAGAGAGGAGTAAAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp AGGGCGGCCCCGGTGTTGGGGGTCGGCCCTCCCAGCAGGGTCAGCTaGCGGACAGCGTTGACGACGTCCTGCTTGTTCATGTATGAATTC +
Preference number: 5 (lower is better)
Translates to: RAAPVLGVGPPSRVS*RTALTTSCLFMYEF
Trigger: GAATTCATACATGAACAAGCAGGACGTCGTCAACGCTGTCCGCCAGCTGACCCTGCTGGGAGGGCCGACCCCCAACACCGGGGCCGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS CCA 90 bp CGCACGGTGGGCGAGCGGCCACCGCTGCAGCTGACCCTGTGCATCTaGCTGATTCTGTTCAAGATGGCGTCCACCTTGGACTCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: RTVGERPPLQLTLCI*LILFKMASTLDSKP
Trigger: GGGCTTCGAGTCCAAGGTGGACGCCATCTTGAACAGAATCAGCCAGATGCACAGGGTCAGCTGCAGCGGTGGCCGCTCGCCCACCGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS TCA 90 bp CCACCGCCGGGTCGTCCACCTCATCGTCAGACTTTCCAGACGAGATaGGGACCAGGAACTGCGGGACGCCCTCTTCAATGCGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PPPGRPPHRQTFQTR*GPGTAGRPLQCGSP
Trigger: TGGGGAGCCGCATTGAAGAGGGCGTCCCGCAGTTCCTGGTCCTCATCTCGTCTGGAAAGTCTGACGATGAGGTGGACGACCCGGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp GCATTGCCCACGTTGATCTGCCGCCCTCCCTTGGGCCTCAGCCGCTaGACCGCGTTCTGCACTTCATCCTTGCTGGAATGGGCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: ALPTLICRPPLGLSR*TAFCTSSLLEWAFS
Trigger: GCTGAACGCCCATTCCAGCAAGGATGAAGTGCAGAACGCGGTGCAGCGGCTGAGGCCCAAGGGAGGGCGGCAGATCAACGTGGGCAATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp GACACACGCACGGTGGGCGAGCGGCCACCGCTGCAGCTGACCCTGTaGATCTGGCTGATTCTGTTCAAGATGGCGTCCACCTTGGACTCG +
Preference number: 5 (lower is better)
Translates to: DTRTVGERPPLQLTL*IWLILFKMASTLDS
Trigger: CGAGTCCAAGGTGGACGCCATCTTGAACAGAATCAGCCAGATGCACAGGGTCAGCTGCAGCGGTGGCCGCTCGCCCACCGTGCGTGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp AGCTCCTCGCGGGTGAGCTGGGTCACCCTCTCAGAGATGACCTGTTaGACGGTCCCCAGCTGGCGAAAGGTGGGAATGGCCACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SSSRVSWVTLSEMTC*TVPSWRKVGMATAK
Trigger: CTTTGCCGTGGCCATTCCCACCTTTCGCCAGCTGGGGACCGTCCAACAGGTCATCTCTGAGAGGGTGACCCAGCTCACCCGCGAGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS CCA 90 bp GGGTGCTGGCTGCGCATGTTCCGGAACTTCTCGAGCATCTCTGGCTaGTACTCGTCAAAGTCAAAGGCCTCCACCGGGCCCGAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: GCWLRMFRNFSSISG*YSSKSKASTGPEGV
Trigger: CACGCCCTCGGGCCCGGTGGAGGCCTTTGACTTTGACGAGTACCAGCCAGAGATGCTCGAGAAGTTCCGGAACATGCGCAGCCAGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS TCA 90 bp GGGCCAGGCTCACATCCTGTGCATCTTCCACCGACTTTCCTCCCGTaGTCACAAAGGCAATCTGAGGGACCCGCTGGTCCAGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: GPGSHPVHLPPTFLP*SQRQSEGPAGPGGC
Trigger: GCAGCCGCCTGGACCAGCGGGTCCCTCAGATTGCCTTTGTGATCACGGGAGGAAAGTCGGTGGAAGATGCACAGGATGTGAGCCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp CTCCCTTGGGCCTCAGCCGCTGCACCGCGTTCTGCACTTCATCCTTaGTGGAATGGGCGTTCAGCAGGAACTCCACCTTGGGGTCATCGC +
Preference number: 5 (lower is better)
Translates to: LPWASAAAPRSALHP*WNGRSAGTPPWGHR
Trigger: GCGATGACCCCAAGGTGGAGTTCCTGCTGAACGCCCATTCCAGCAAGGATGAAGTGCAGAACGCGGTGCAGCGGCTGAGGCCCAAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp TTGATCTGCCGCCCTCCCTTGGGCCTCAGCCGCTGCACCGCGTTCTaGACTTCATCCTTGCTGGAATGGGCGTTCAGCAGGAACTCCACC +
Preference number: 5 (lower is better)
Translates to: LICRPPLGLSRCTAF*TSSLLEWAFSRNST
Trigger: GGTGGAGTTCCTGCTGAACGCCCATTCCAGCAAGGATGAAGTGCAGAACGCGGTGCAGCGGCTGAGGCCCAAGGGAGGGCGGCAGATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp AAGATGTTCCTGGACACGTACTCCAGGGCATTGCCCACGTTGATCTaGCGCCCTCCCTTGGGCCTCAGCCGCTGCACCGCGTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: KMFLDTYSRALPTLI*RPPLGLSRCTAFCT
Trigger: AGTGCAGAACGCGGTGCAGCGGCTGAGGCCCAAGGGAGGGCGGCAGATCAACGTGGGCAATGCCCTGGAGTACGTGTCCAGGAACATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp GATCACAAAGGCAATCTGAGGGACCCGCTGGTCCAGGCGGCTGCCTaGCTCAGGCACAAAGTGGTTTACCCGCAGGTGCTCAAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: DHKGNLRDPLVQAAA*LRHKVVYPQVLKAH
Trigger: GTGGGCCTTGAGCACCTGCGGGTAAACCACTTTGTGCCTGAGGCAGGCAGCCGCCTGGACCAGCGGGTCCCTCAGATTGCCTTTGTGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp CGATGCTGCCGATGGGCCCGCGGTCTCCCCTCTGCCCAGAGCACTTaGAGGGAACCCCACAGCAAGCTTTCTCGGCAATGTTGTCAAGCT +
Preference number: 5 (lower is better)
Translates to: RCCRWARGLPSAQST*REPHSKLSRQCCQA
Trigger: AGCTTGACAACATTGCCGAGAAAGCTTGCTGTGGGGTTCCCTGCAAGTGCTCTGGGCAGAGGGGAGACCGCGGGCCCATCGGCAGCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp ACGGACTCAGAGGGCGCGTGCTGCACAACTGCCACTCTGGCGAAGTaGTGGGAGGCCTTGGGATCTGGGCTCATGTCCAGTTGTCTGACC +
Preference number: 5 (lower is better)
Translates to: TDSEGACCTTATLAK*WEALGSGLMSSCLT
Trigger: GGTCAGACAACTGGACATGAGCCCAGATCCCAAGGCCTCCCAGCACTTCGCCAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGAGTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS GCA 90 bp CATGCTGGCATTGTCCACGGACTCAGAGGGCGCGTGCTGCACAACTaGCACTCTGGCGAAGTGCTGGGAGGCCTTGGGATCTGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: HAGIVHGLRGRVLHN*HSGEVLGGLGIWAH
Trigger: ATGAGCCCAGATCCCAAGGCCTCCCAGCACTTCGCCAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGAGTCCGTGGACAATGCCAGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS GCA 90 bp ACAGGTGGCATGCTGGCATTGTCCACGGACTCAGAGGGCGCGTGCTaGACAACTGCCACTCTGGCGAAGTGCTGGGAGGCCTTGGGATCT +
Preference number: 5 (lower is better)
Translates to: TGGMLALSTDSEGAC*TTATLAKCWEALGS
Trigger: AGATCCCAAGGCCTCCCAGCACTTCGCCAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGAGTCCGTGGACAATGCCAGCATGCCACCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS GCA 90 bp TTCACAGGTGGCATGCTGGCATTGTCCACGGACTCAGAGGGCGCGTaGTGCACAACTGCCACTCTGGCGAAGTGCTGGGAGGCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: FTGGMLALSTDSEGA*CTTATLAKCWEALG
Trigger: TCCCAAGGCCTCCCAGCACTTCGCCAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGAGTCCGTGGACAATGCCAGCATGCCACCTGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS CCA 90 bp GTAGGGGTGCTGGCTGCGCATGTTCCGGAACTTCTCGAGCATCTCTaGCTGGTACTCGTCAAAGTCAAAGGCCTCCACCGGGCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: VGVLAAHVPELLEHL*LVLVKVKGLHRARG
Trigger: CCCTCGGGCCCGGTGGAGGCCTTTGACTTTGACGAGTACCAGCCAGAGATGCTCGAGAAGTTCCGGAACATGCGCAGCCAGCACCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp GACTCAGAGGGCGCGTGCTGCACAACTGCCACTCTGGCGAAGTGCTaGGAGGCCTTGGGATCTGGGCTCATGTCCAGTTGTCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: DSEGACCTTATLAKC*EALGSGLMSSCLTR
Trigger: CCTGGTCAGACAACTGGACATGAGCCCAGATCCCAAGGCCTCCCAGCACTTCGCCAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS CCA 90 bp AGTCACGAGAGGTCTGCCCAGAGCCACGGACACCCAGCCCATGAGTaGCCTCACAGCAGCACACTCCACTCCCCGTCTGATTGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SHERSAQSHGHPAHE*PHSSTLHSPSDWLL
Trigger: GAGAAGCCAATCAGACGGGGAGTGGAGTGTGCTGCTGTGAGGCCACTCATGGGCTGGGTGTCCGTGGCTCTGGGCAGACCTCTCGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473258.1
CDS TCA 90 bp TCAGCAGCTGGGGCACACCTTCTGTTATCCTGCTTCCCGCAGAGCTaGCCAGGATGTTCCTCAGGACAAACTCCAGGGCGGCCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: SAAGAHLLLSCFPQS*PGCSSGQTPGRPRC
Trigger: ACACCGGGGCCGCCCTGGAGTTTGTCCTGAGGAACATCCTGGTCAGCTCTGCGGGAAGCAGGATAACAGAAGGTGTGCCCCAGCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp TCCTGGTCTGCGTTCCTGGCGATCGTGAAAGGGGCCACGCCAAACTaGTTGAGCTCCACCGCCGGGTCGTCCACCTCATCGTCAGACTTT +
Preference number: 5 (lower is better)
Translates to: SWSAFLAIVKGATPN*LSSTAGSSTSSSDF
Trigger: AAAGTCTGACGATGAGGTGGACGACCCGGCGGTGGAGCTCAAGCAGTTTGGCGTGGCCCCTTTCACGATCGCCAGGAACGCAGACCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp TGGATCTGCTCTGAGGTCAGGGTCGTGATGGGCGTCAGCAGTTTCTaGTCCAGGCTGGGCAGCTCCCGGAAGGTGCTCACCGAGAACACA +
Preference number: 5 (lower is better)
Translates to: WICSEVRVVMGVSSF*SRLGSSRKVLTENT
Trigger: TGTGTTCTCGGTGAGCACCTTCCGGGAGCTGCCCAGCCTGGAGCAGAAACTGCTGACGCCCATCACGACCCTGACCTCAGAGCAGATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS CCA 90 bp ACGCGGACCCGGTCCTGGCCCACATCCAGGCTTTCCACCACTCTCTaGACAAACTCTTTCAACAGAGGGAAGCCGCTCCTGACGCCCTCA +
Preference number: 5 (lower is better)
Translates to: TRTRSWPTSRLSTTL*TNSFNRGKPLLTPS
Trigger: TGAGGGCGTCAGGAGCGGCTTCCCTCTGTTGAAAGAGTTTGTCCAGAGAGTGGTGGAAAGCCTGGATGTGGGCCAGGACCGGGTCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS CCA 90 bp GGCCTCAGCCGCTGCACCGCGTTCTGCACTTCATCCTTGCTGGAATaGGCGTTCAGCAGGAACTCCACCTTGGGGTCATCGCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: GLSRCTAFCTSSLLE*AFSRNSTLGSSLNW
Trigger: CCAGTTCAGCGATGACCCCAAGGTGGAGTTCCTGCTGAACGCCCATTCCAGCAAGGATGAAGTGCAGAACGCGGTGCAGCGGCTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS CCA 90 bp CATTGTCCACGGACTCAGAGGGCGCGTGCTGCACAACTGCCACTCTaGCGAAGTGCTGGGAGGCCTTGGGATCTGGGCTCATGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: HCPRTQRARAAQLPL*RSAGRPWDLGSCPV
Trigger: AACTGGACATGAGCCCAGATCCCAAGGCCTCCCAGCACTTCGCCAGAGTGGCAGTTGTGCAGCACGCGCCCTCTGAGTCCGTGGACAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS CCA 90 bp CTTTGCTGCTACAGGCTTCGCTGCCGTTGCTGGCTTCACCGCCACTaGGGGTCTAACAGTGGCCATCTTTGTGGCCACAGGCTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LCCYRLRCRCWLHRH*GSNSGHLCGHRLGS
Trigger: GCTGCCAAGCCTGTGGCCACAAAGATGGCCACTGTTAGACCCCCAGTGGCGGTGAAGCCAGCAACGGCAGCGAAGCCTGTAGCAGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000682957.1
ENST00000684508.1
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGATCTGCCGCCCTCCCTaGGGCCTCAGCCGCTGCACC +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILICRPP*GLSRCT
Trigger: GGTGCAGCGGCTGAGGCCCAAGGGAGGGCGGCAGAT...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGCCACGCCAAACTGCTaGAGCTCCACCGCCGGGTCG +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTATPNC*SSTAGS
Trigger: CGACCCGGCGGTGGAGCTCAAGCAGTTTGGCGTGGC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTGGGCCCGAGGGCGTGTaGGCCACCACTGACACACGC +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTGPEGV*ATTDTR
Trigger: GCGTGTGTCAGTGGTGGCCAACACGCCCTCGGGCCC...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp CAGGCAGCATGCCTTGCAATGGGGCGGCTCGGAACTCAGCTGGGATaGACACCAGGGAGGAGTCGAAAGCGATCTCTTCCAGCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: QAACLAMGRLGTQLG*TPGRSRKRSLPAQP
Trigger: AGGCTGAGCTGGAAGAGATCGCTTTCGACTCCTCCCTGGTGTTCATCCCAGCTGAGTTCCGAGCCGCCCCATTGCAAGGCATGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000472056.5
CDS TCA 90 bp GGGTGGTGTCAAAGCCCACGTCCAGGTAGTCAACCAGCCTCTCTATaGGGGTGCGAACGTACTGGAACTCAGGCCCGGCACTTTGGGACC +
Preference number: 5 (lower is better)
Translates to: GWCQSPRPGSQPASL*GCERTGTQARHFGT
Trigger: GGTCCCAAAGTGCCGGGCCTGAGTTCCAGTACGTTCGCACCCTCATAGAGAGGCTGGTTGACTACCTGGACGTGGGCTTTGACACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS CCA 90 bp CAAGCCAGGCAGCATGCCTTGCAATGGGGCGGCTCGGAACTCAGCTaGGATGAACACCAGGGAGGAGTCGAAAGCGATCTCTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QARQHALQWGGSELS*DEHQGGVESDLFQL
Trigger: GAGCTGGAAGAGATCGCTTTCGACTCCTCCCTGGTGTTCATCCCAGCTGAGTTCCGAGCCGCCCCATTGCAAGGCATGCTGCCTGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000472056.5
CDS CCA 90 bp CGGACAGCTCCTGGACGTTGCCCACGCGGAACGCTGTGGCGCTGTTaGACGCTATCTTTCCAACCTCCTCCGAGTCGATATTCCTCACTC +
Preference number: 5 (lower is better)
Translates to: RTAPGRCPRGTLWRC*TLSFQPPPSRYSSL
Trigger: GAGTGAGGAATATCGACTCGGAGGAGGTTGGAAAGATAGCGTCCAACAGCGCCACAGCGTTCCGCGTGGGCAACGTCCAGGAGCTGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp CGCTCAGTTCGGACAGCTCCTGGACGTTGCCCACGCGGAACGCTGTaGCGCTGTTGGACGCTATCTTTCCAACCTCCTCCGAGTCGATAT +
Preference number: 5 (lower is better)
Translates to: RSVRTAPGRCPRGTL*RCWTLSFQPPPSRY
Trigger: ATATCGACTCGGAGGAGGTTGGAAAGATAGCGTCCAACAGCGCCACAGCGTTCCGCGTGGGCAACGTCCAGGAGCTGTCCGAACTGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp GCAGTCCTTGCAGGAGGCTGGAGCCCAGGAGAACTGAACGGCCTTTaGTGGAAGACTGAGCTCCAAACTGGACTGGGGCCAGGGATACCA +
Preference number: 5 (lower is better)
Translates to: AVLAGGWSPGELNGL*WKTELQTGLGPGIP
Trigger: TGGTATCCCTGGCCCCAGTCCAGTTTGGAGCTCAGTCTTCCACCAAAGGCCGTTCAGTTCTCCTGGGCTCCAGCCTCCTGCAAGGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392003.6
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGCCAGGCAGCATGCCTaGCAATGGGGCGGCTCGGAA +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTARQHA*QWGGSE
Trigger: TTCCGAGCCGCCCCATTGCAAGGCATGCTGCCTGGC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp GCAAGGCCATCCTTCGAGTGTCCATCAGTTAACACTACGATAACCTaGGGGACTCCGTCACCGGCCCGGCTTCCAGCAGCCTTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ARPSFECPSVNTTIT*GTPSPARLPAALVR
Trigger: CCTCACCAAGGCTGCTGGAAGCCGGGCCGGTGACGGAGTCCCTCAGGTTATCGTAGTGTTAACTGATGGACACTCGAAGGATGGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000433762.1
CDS TCA 90 bp GGAGCTGCGGCACGTGTTCACGGATCCTGCTGCCGCCAGCTTCCGTaGAGTGGTTGGCATAGACATAGCTTAGGGCTGAGCCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: GAAARVHGSCCRQLP*SGWHRHSLGLSLCS
Trigger: TGAACACAGGCTCAGCCCTAAGCTATGTCTATGCCAACCACTTCACGGAAGCTGGCGGCAGCAGGATCCGTGAACACGTGCCGCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
CDS TCA 90 bp TGTTGGGGGTCGGCCCTCCCAGCAGGGTCAGCTGGCGGACAGCGTTaGCGACGTCCTGCTTGTTCATGTATGAATTCAGGTAGAACTCGG +
Preference number: 5 (lower is better)
Translates to: CWGSALPAGSAGGQR*RRPACSCMNSGRTR
Trigger: CCGAGTTCTACCTGAATTCATACATGAACAAGCAGGACGTCGTCAACGCTGTCCGCCAGCTGACCCTGCTGGGAGGGCCGACCCCCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS TCA 90 bp TGCGAACGTACTGGAACTCAGGCCCGGCACTTTGGGACCCATCGATaGGAAAGACCACGTCCCTCTTGCCACCAACACCTGGGCTCGGTA +
Preference number: 5 (lower is better)
Translates to: CERTGTQARHFGTHR*ERPRPSCHQHLGSV
Trigger: TACCGAGCCCAGGTGTTGGTGGCAAGAGGGACGTGGTCTTTCTCATCGATGGGTCCCAAAGTGCCGGGCCTGAGTTCCAGTACGTTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp GCCGATATTGGCCAACTCCCCACCAGCAAACCCGAGGGCTTTCACTaGACCCAGAACCTGGGCCTTGGTGGAGTAGGTGTCCAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: ADIGQLPTSKPEGFH*TQNLGLGGVGVQGE
Trigger: TTCTCCTTGGACACCTACTCCACCAAGGCCCAGGTTCTGGGTGCAGTGAAAGCCCTCGGGTTTGCTGGTGGGGAGTTGGCCAATATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392004.7
ENST00000433762.1
ENST00000491233.1
CDS GCA 90 bp GGGTCTTACAGCTGCTGGCTTTGCTGCTACAGGCTTCGCTGCCGTTaGTGGCTTCACCGCCACTGGGGGTCTAACAGTGGCCATCTTTGT +
Preference number: 5 (lower is better)
Translates to: GSYSCWLCCYRLRCR*WLHRHWGSNSGHLC
Trigger: ACAAAGATGGCCACTGTTAGACCCCCAGTGGCGGTGAAGCCAGCAACGGCAGCGAAGCCTGTAGCAGCAAAGCCAGCAGCTGTAAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000682957.1
ENST00000684508.1
CDS GCA 90 bp GCCAACAGCACGCACAGAGCACAGACCTGCAAAGCGTTGATGAGCTaGCGGTCTTCCTGCCTTGTAAGGAACAAGGGGGTGATCCCCGCA +
Preference number: 5 (lower is better)
Translates to: ANSTHRAQTCKALMS*RSSCLVRNKGVIPA
Trigger: TGCGGGGATCACCCCCTTGTTCCTTACAAGGCAGGAAGACCGGCAGCTCATCAACGCTTTGCAGGTCTGTGCTCTGTGCGTGCTGTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS CCA 90 bp CACCAGCAAACCCGAGGGCTTTCACTGCACCCAGAACCTGGGCCTTaGTGGAGTAGGTGTCCAAGGAGAACATGGTTCTGGGCTCATCGC +
Preference number: 5 (lower is better)
Translates to: HQQTRGLSLHPEPGP*WSRCPRRTWFWAHR
Trigger: GCGATGAGCCCAGAACCATGTTCTCCTTGGACACCTACTCCACCAAGGCCCAGGTTCTGGGTGCAGTGAAAGCCCTCGGGTTTGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392004.7
ENST00000433762.1
ENST00000491233.1
CDS CCA 90 bp GAGAACACATATTCGGGGCTCAGCGAGATCTTCACCAGCTCCTCCTaGTCTGCGTTCCTGGCGATCGTGAAAGGGGCCACGCCAAACTGC +
Preference number: 5 (lower is better)
Translates to: ENTYSGLSEIFTSSS*SAFLAIVKGATPNC
Trigger: GCAGTTTGGCGTGGCCCCTTTCACGATCGCCAGGAACGCAGACCAGGAGGAGCTGGTGAAGATCTCGCTGAGCCCCGAATATGTGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS CCA 90 bp CCCCTAAACTCACAATGCCCGAGGAACGGATCACCTGGGCGAACCTaGACACATCGTCCTGGGATTTTCCACCCAGGACCAGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: PLNSQCPRNGSPGRT*THRPGIFHPGPGPG
Trigger: ACCTGGTCCTGGTCCTGGGTGGAAAATCCCAGGACGATGTGTCCAGGTTCGCCCAGGTGATCCGTTCCTCGGGCATTGTGAGTTTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp CGGTCTCCTACCCCTAAACTCACAATGCCCGAGGAACGGATCACCTaGGCGAACCTGGACACATCGTCCTGGGATTTTCCACCCAGGACC +
Preference number: 5 (lower is better)
Translates to: RSPTPKLTMPEERIT*ANLDTSSWDFPPRT
Trigger: GGTCCTGGGTGGAAAATCCCAGGACGATGTGTCCAGGTTCGCCCAGGTGATCCGTTCCTCGGGCATTGTGAGTTTAGGGGTAGGAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp CTCCTTGGAGCCATAGTCAGTCAGGGAGAATTCCACCTTCACAGGTaGCATGCTGGCATTGTCCACGGACTCAGAGGGCGCGTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LLGAIVSQGEFHLHR*HAGIVHGLRGRVLH
Trigger: GTGCAGCACGCGCCCTCTGAGTCCGTGGACAATGCCAGCATGCCACCTGTGAAGGTGGAATTCTCCCTGACTGACTATGGCTCCAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000682957.1
ENST00000684508.1
CDS CCA 90 bp GAGCAACCTGGCCTGGAGGAAGAATCCCTCAGAGGCCAAGCTCTCTaGGTCAAGGAGAGGGAGACCCACCTGAGTCCTTTCCAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: EQPGLEEESLRGQAL*VKERETHLSPFQLA
Trigger: TGCAAGCTGGAAAGGACTCAGGTGGGTCTCCCTCTCCTTGACCCAGAGAGCTTGGCCTCTGAGGGATTCTTCCTCCAGGCCAGGTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683155.1
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCAGGGCGAGGCCGATATaGGCCAACTCCCCACCAGCA +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTRARPI*ANSPPA
Trigger: TGCTGGTGGGGAGTTGGCCAATATCGGCCTCGCCCT...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTGCCAGGCAGCATGCCTaGCAATGGGGCGGCTCGGAA +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTARQHA*QWGGSE
Trigger: TTCCGAGCCGCCCCATTGCAAGGCATGCTGCCTGGC...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCTTCTTCGCCCCTGTTGCCCTaGGGACCAGCTGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: ESTPGASTETSWRWLTPSSPLLP*GPAGPG
Trigger: CCCAGGACCAGCTGGTCCCAAGGGCAACAGGGGCGA...AGAAGGAGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATGGAGTCGCCCCTGTaGCCCTTGGGACCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTMESPL*PLGPAG
Trigger: ACCAGCTGGTCCCAAGGGCAACAGGGGCGACTCCAT...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp CCCACTCTGCTTCAGGTTACTTGCTGGCCCATCCACACGGTCAGATaGCCTTCCTGCGACCAGCAGCACCAGGAACTGAAGCACTCCATC +
Preference number: 5 (lower is better)
Translates to: PTLLQVTCWPIHTVR*PSCDQQHQELKHSI
Trigger: GATGGAGTGCTTCAGTTCCTGGTGCTGCTGGTCGCAGGAAGGTCATCTGACCGTGTGGATGGGCCAGCAAGTAACCTGAAGCAGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS TCA 90 bp GGTCAGCTGGCGGACAGCGTTGACGACGTCCTGCTTGTTCATGTATaGATTCAGGTAGAACTCGGGCCTGGTCCGGTCGCTGTACTGCAC +
Preference number: 5 (lower is better)
Translates to: GQLADSVDDVLLVHV*IQVELGPGPVAVLH
Trigger: GTGCAGTACAGCGACCGGACCAGGCCCGAGTTCTACCTGAATTCATACATGAACAAGCAGGACGTCGTCAACGCTGTCCGCCAGCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS TCA 90 bp AAGCCATGTCGATGTCCACATCGCTCCCTGCCGCTCTCCTGTCCCTaGAGGAAGGCCTCCAACTGCCAAATCCACAGGATGGGTCGATGT +
Preference number: 5 (lower is better)
Translates to: KPCRCPHRSLPLSCP*RKASNCQIHRMGRC
Trigger: ACATCGACCCATCCTGTGGATTTGGCAGTTGGAGGCCTTCCTTCAGGGACAGGAGAGCGGCAGGGAGCGATGTGGACATCGACATGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS TCA 90 bp CACTGCCTAAGGCCCTGGTTCCCTGCAACTGTGTCATTCCCCTGCTaGGGAAGTCCACCAGCTTCTCCTTGGAGCCATAGTCAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: HCLRPWFPATVSFPC*GSPPASPWSHSQSG
Trigger: CCCTGACTGACTATGGCTCCAAGGAGAAGCTGGTGGACTTCCTCAGCAGGGGAATGACACAGTTGCAGGGAACCAGGGCCTTAGGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000682957.1
ENST00000684508.1
CDS TCA 90 bp GGAAAACTCTTGCAGTCCTTGCAGGAGGCTGGAGCCCAGGAGAACTaGACGGCCTTTGGTGGAAGACTGAGCTCCAAACTGGACTGGGGC +
Preference number: 5 (lower is better)
Translates to: GKLLQSLQEAGAQEN*TAFGGRLSSKLDWG
Trigger: GCCCCAGTCCAGTTTGGAGCTCAGTCTTCCACCAAAGGCCGTTCAGTTCTCCTGGGCTCCAGCCTCCTGCAAGGACTGCAAGAGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392003.6
CDS GCA 90 bp TGGAGCCATAGTCAGTCAGGGAGAATTCCACCTTCACAGGTGGCATaGTGGCATTGTCCACGGACTCAGAGGGCGCGTGCTGCACAACTG +
Preference number: 5 (lower is better)
Translates to: WSHSQSGRIPPSQVA*WHCPRTQRARAAQL
Trigger: CAGTTGTGCAGCACGCGCCCTCTGAGTCCGTGGACAATGCCAGCATGCCACCTGTGAAGGTGGAATTCTCCCTGACTGACTATGGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS GCA 90 bp TGTGGCCACAGGCTTGGCAGCCACAGGTTTCGCAGGGGCCGGCTTTaGAGCGGCTGGCTTCACAGATGGCTGATTTATAATAGTCACAGG +
Preference number: 5 (lower is better)
Translates to: CGHRLGSHRFRRGRL*SGWLHRWLIYNSHR
Trigger: CCTGTGACTATTATAAATCAGCCATCTGTGAAGCCAGCCGCTGCAAAGCCGGCCCCTGCGAAACCTGTGGCTGCCAAGCCTGTGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000682957.1
ENST00000684508.1
CDS CCA 90 bp AGCCATAGTCAGTCAGGGAGAATTCCACCTTCACAGGTGGCATGCTaGCATTGTCCACGGACTCAGAGGGCGCGTGCTGCACAACTGCCA +
Preference number: 5 (lower is better)
Translates to: SHSQSGRIPPSQVAC*HCPRTQRARAAQLP
Trigger: TGGCAGTTGTGCAGCACGCGCCCTCTGAGTCCGTGGACAATGCCAGCATGCCACCTGTGAAGGTGGAATTCTCCCTGACTGACTATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS CCA 90 bp GACTCAGAGCTGCGGAGGAAAACTCTTGCAGTCCTTGCAGGAGGCTaGAGCCCAGGAGAACTGAACGGCCTTTGGTGGAAGACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: DSELRRKTLAVLAGG*SPGELNGLWWKTEL
Trigger: GAGCTCAGTCTTCCACCAAAGGCCGTTCAGTTCTCCTGGGCTCCAGCCTCCTGCAAGGACTGCAAGAGTTTTCCTCCGCAGCTCTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000683145.1
CDS CCA 90 bp GTTTTGGGGACCTCACTGAGAGACTACAGGCCTCCAGGGCCACCCTaGATATTCACCTTCAGGGCCGATTGGGACAGAGTGGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: VLGTSLRDYRPPGPP*IFTFRADWDRVETG
Trigger: TCCAGTCTCCACTCTGTCCCAATCGGCCCTGAAGGTGAATATCCAGGGTGGCCCTGGAGGCCTGTAGTCTCTCAGTGAGGTCCCCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGGGGCCCGAGGGCGTGTaGGCCACCACTGACACACGC +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTGPEGV*ATTDTR
Trigger: GCGTGTGTCAGTGGTGGCCAACACGCCCTCGGGCCC...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTATGGAGTCGCCCCTGTaGCCCTTGGGACCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTMESPL*PLGPAG
Trigger: ACCAGCTGGTCCCAAGGGCAACAGGGGCGACTCCAT...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp AATTCCGGGACAGTAAACACCAAGTTGTCATCGGTAGCTATGTGCTaGAGCTCTGCCCTGGAGGCGGCCTGGGCTCCAAGGCCGAATGAG +
Preference number: 5 (lower is better)
Translates to: NSGTVNTKLSSVAMC*SSALEAAWAPRPNE
Trigger: CTCATTCGGCCTTGGAGCCCAGGCCGCCTCCAGGGCAGAGCTTCAGCACATAGCTACCGATGACAACTTGGTGTTTACTGTCCCGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392004.7
ENST00000433762.1
ENST00000491233.1
CDS TCA 90 bp TCCACACGGTCAGATGACCTTCCTGCGACCAGCAGCACCAGGAACTaGAGCACTCCATCCTCGATCCGGCTGCCAGCAGACTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: STRSDDLPATSSTRN*STPSSIRLPADFTK
Trigger: TTTTGTGAAGTCTGCTGGCAGCCGGATCGAGGATGGAGTGCTTCAGTTCCTGGTGCTGCTGGTCGCAGGAAGGTCATCTGACCGTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp AAGGTGGGAATGGCCACGGCAAAGTCCGGGATGAAGGAGATGGTCTaGATCTCTGTGATGTCAGCGTTCCCGATGCCAATGCCAATGGGC +
Preference number: 5 (lower is better)
Translates to: KVGMATAKSGMKEMV*ISVMSAFPMPMPMG
Trigger: GCCCATTGGCATTGGCATCGGGAACGCTGACATCACAGAGATGCAGACCATCTCCTTCATCCCGGACTTTGCCGTGGCCATTCCCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp GCTCTGTTCTGTCGATGTTCCGGTCTCCTACCCCTAAACTCACAATaGCCGAGGAACGGATCACCTGGGCGAACCTGGACACATCGTCCT +
Preference number: 5 (lower is better)
Translates to: ALFCRCSGLLPLNSQ*PRNGSPGRTWTHRP
Trigger: AGGACGATGTGTCCAGGTTCGCCCAGGTGATCCGTTCCTCGGGCATTGTGAGTTTAGGGGTAGGAGACCGGAACATCGACAGAACAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp AGCCTCAGGGGCCTGTCATACATAAACCCTCGCCCAAACTCCAGATaGATTAGCCGCTCCAAGTTGACCACTCGTTCAAGGCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: SLRGLSYINPRPNSR*ISRSKLTTRSRPTR
Trigger: CCTGGTGGGCCTTGAACGAGTGGTCAACTTGGAGCGGCTAATGCATCTGGAGTTTGGGCGAGGGTTTATGTATGACAGGCCCCTGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp CACAGAGCACAGACCTGCAAAGCGTTGATGAGCTGCCGGTCTTCCTaGCTTGTAAGGAACAAGGGGGTGATCCCCGCATCTGAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: HRAQTCKALMSCRSS*LVRNKGVIPASESL
Trigger: CAAGCTCTCAGATGCGGGGATCACCCCCTTGTTCCTTACAAGGCAGGAAGACCGGCAGCTCATCAACGCTTTGCAGGTCTGTGCTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS CCA 90 bp CTCTCTATGAGGGTGCGAACGTACTGGAACTCAGGCCCGGCACTTTaGGACCCATCGATGAGAAAGACCACGTCCCTCTTGCCACCAACA +
Preference number: 5 (lower is better)
Translates to: LSMRVRTYWNSGPAL*DPSMRKTTSLLPPT
Trigger: TGTTGGTGGCAAGAGGGACGTGGTCTTTCTCATCGATGGGTCCCAAAGTGCCGGGCCTGAGTTCCAGTACGTTCGCACCCTCATAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS CCA 90 bp TCATGCAAAGTTTCCAAAACTTGCTCGCTCAGTTCGGACAGCTCCTaGACGTTGCCCACGCGGAACGCTGTGGCGCTGTTGGACGCTATC +
Preference number: 5 (lower is better)
Translates to: SCKVSKTCSLSSDSS*TLPTRNAVALLDAI
Trigger: GATAGCGTCCAACAGCGCCACAGCGTTCCGCGTGGGCAACGTCCAGGAGCTGTCCGAACTGAGCGAGCAAGTTTTGGAAACTTTGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp TTCAGTCCTGACCATCTGTGTTTAGCTGTTCAATTCCCAGTCCCCTaGGCTCTGCTGAACCAGTCACGAGAGGTCTGCCCAGAGCCACGG +
Preference number: 5 (lower is better)
Translates to: FSPDHLCLAVQFPVP*ALLNQSREVCPEPR
Trigger: CCGTGGCTCTGGGCAGACCTCTCGTGACTGGTTCAGCAGAGCCCAGGGGACTGGGAATTGAACAGCTAAACACAGATGGTCAGGACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473258.1
CDS CCA 90 bp CAAGCATGTAGGCGTCCCTGTAGTGCTGGAGCCACGAGGTTGTCCTaGAGACCTCACAAGAGAAGTTCTCAGGCAGATGGCCTCATTGGG +
Preference number: 5 (lower is better)
Translates to: QACRRPCSAGATRLS*RPHKRSSQADGLIG
Trigger: CCCAATGAGGCCATCTGCCTGAGAACTTCTCTTGTGAGGTCTCCAGGACAACCTCGTGGCTCCAGCACTACAGGGACGCCTACATGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCTCAGGCCCGGCACTTaGGGACCCATCGATGAGAAA +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTLRPGT*GPIDEK
Trigger: TTTCTCATCGATGGGTCCCAAAGTGCCGGGCCTGAG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCTCCCCAGGGGCCTCTaGAAGATGTTCCTGGACACG +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTLPRGL*KMFLDT
Trigger: CGTGTCCAGGAACATCTTCAAGAGGCCCCTGGGGAG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCTCCCCAGGGGCCTCTaGAAGATGTTCCTGGACACG +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILLPRGL*KMFLDT
Trigger: CGTGTCCAGGAACATCTTCAAGAGGCCCCTGGGGAG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTGGCCAGGACCGCCCTaGTTGCCCTTAGCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMWPGPP*LPLAPG
Trigger: CCCCGGAGCTAAGGGCAACAAGGGCGGTCCTGGCCA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTCCCGATTCCTCCTTTaGGTCCTGGCTCTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILSRFLL*VLALRA
Trigger: AGCCCGGAGAGCCAGGACCAAAAGGAGGAATCGGGA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTCGCCCCTGTTGCCCTaGGGACCAGCTGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSPLLP*GPAGPG
Trigger: CCCAGGACCAGCTGGTCCCAAGGGCAACAGGGGCGA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTCGCAGGGGCCGGCTTaGCAGCGGCTGGCTTCACAG +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSQGPA*QRLASQ
Trigger: CTGTGAAGCCAGCCGCTGCAAAGCCGGCCCCTGCGA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCTGATGACTCCGGGTTaGGCGAGCACAGGAGCGCAA +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTLMTPG*ASTGAQ
Trigger: TTGCGCTCCTGTGCTCGCCAAACCCGGAGTCATCAG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp GGATCTCAGGCTTACTCTGGTGCTCATCAAAACGGGACTCCACCTTaGCATCATCGCTGTACTGAGCCACCGCAATTCGGGTCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: GSQAYSGAHQNGTPP*HHRCTEPPQFGSPL
Trigger: CAGAGGGGACCCGAATTGCGGTGGCTCAGTACAGCGATGATGTCAAGGTGGAGTCCCGTTTTGATGAGCACCAGAGTAAGCCTGAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000472056.5
CDS GCA 90 bp ATCCTCGATCCGGCTGCCAGCAGACTTCACAAAAATGTACCTCTGTaGATAGTCCAGCGCGTAGCCCAGGTTGAGGGCTTTGCCCGTCTT +
Preference number: 5 (lower is better)
Translates to: ILDPAASRLHKNVPL*IVQRVAQVEGFARL
Trigger: AAGACGGGCAAAGCCCTCAACCTGGGCTACGCGCTGGACTATGCACAGAGGTACATTTTTGTGAAGTCTGCTGGCAGCCGGATCGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp CGACCAGCAGCACCAGGAACTGAAGCACTCCATCCTCGATCCGGCTaGCAGCAGACTTCACAAAAATGTACCTCTGTGCATAGTCCAGCG +
Preference number: 5 (lower is better)
Translates to: RPAAPGTEALHPRSG*QQTSQKCTSVHSPA
Trigger: CGCTGGACTATGCACAGAGGTACATTTTTGTGAAGTCTGCTGGCAGCCGGATCGAGGATGGAGTGCTTCAGTTCCTGGTGCTGCTGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp AAGTTTCCAAAACTTGCTCGCTCAGTTCGGACAGCTCCTGGACGTTaGCCACGCGGAACGCTGTGGCGCTGTTGGACGCTATCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: KFPKLARSVRTAPGR*PRGTLWRCWTLSFQ
Trigger: TTGGAAAGATAGCGTCCAACAGCGCCACAGCGTTCCGCGTGGGCAACGTCCAGGAGCTGTCCGAACTGAGCGAGCAAGTTTTGGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp TCCAGGAAGTCTGTGAGGTCTCTCCCTGCAGGCAGGACAAGCGCATaGCCCACTGCTGTGTTATTGATCTGCAAAGCGTTGATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SRKSVRSLPAGRTSA*PTAVLLICKALMSC
Trigger: GCAGCTCATCAACGCTTTGCAGATCAATAACACAGCAGTGGGGCATGCGCTTGTCCTGCCTGCAGGGAGAGACCTCACAGACTTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp CCCAGAAGAAAGGGAGATGCCAACAGCACGCACAGAGCACAGACCTaGAAAGCGTTGATGAGCTGCCGGTCTTCCTGCCTTGTAAGGAAC +
Preference number: 5 (lower is better)
Translates to: PRRKGDANSTHRAQT*KALMSCRSSCLVRN
Trigger: GTTCCTTACAAGGCAGGAAGACCGGCAGCTCATCAACGCTTTGCAGGTCTGTGCTCTGTGCGTGCTGTTGGCATCTCCCTTTCTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS CCA 90 bp CTGCACAACTGCCACTCTGGCGAAGTGCTGGGAGGCCTTGGGATCTaGGCTCATGTCCAGTTGTCTGACCAGGTACGCTATGTACTTCTT +
Preference number: 5 (lower is better)
Translates to: LHNCHSGEVLGGLGI*AHVQLSDQVRYVLL
Trigger: AAGAAGTACATAGCGTACCTGGTCAGACAACTGGACATGAGCCCAGATCCCAAGGCCTCCCAGCACTTCGCCAGAGTGGCAGTTGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS CCA 90 bp TACAGGCCTCCAGGGCCACCCTGGATATTCACCTTCAGGGCCGATTaGGACAGAGTGGAGACTGGAATGGGTATCATCAGCACATGGGTT +
Preference number: 5 (lower is better)
Translates to: YRPPGPPWIFTFRAD*DRVETGMGIISTWV
Trigger: AACCCATGTGCTGATGATACCCATTCCAGTCTCCACTCTGTCCCAATCGGCCCTGAAGGTGAATATCCAGGGTGGCCCTGGAGGCCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS CCA 90 bp CATTATCTATCTCATTTCCAGATGAACCCAGTTCTCCCTCAAGGGTaGGAGCTCAGGGTATCAGGCTGTCAGTGGCCCCAGGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: HYLSHFQMNPVLPQG*ELRVSGCQWPQEVP
Trigger: GGGCACCTCCTGGGGCCACTGACAGCCTGATACCCTGAGCTCCCACCCTTGAGGGAGAACTGGGTTCATCTGGAAATGAGATAGATAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683155.1
CDS-3UTR CAA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCTCAGAGATGACCTGTaGGACGGTCCCCAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSLRDDL*DGPQLA
Trigger: CGCCAGCTGGGGACCGTCCAACAGGTCATCTCTGAG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCTCAGGCCCGGCACTTaGGGACCCATCGATGAGAAA +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTLRPGT*GPIDEK
Trigger: TTTCTCATCGATGGGTCCCAAAGTGCCGGGCCTGAG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAATCTGCCGCCCTCCCTaGGGCCTCAGCCGCTGCACC +
Preference number: 5 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGICRPP*GLSRCT
Trigger: GGTGCAGCGGCTGAGGCCCAAGGGAGGGCGGCAGAT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTAGGCCCACCTTAGTGTaGGCGTGTCTTCCCCCTTTG +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTRPTLV*ACLPPL
Trigger: CAAAGGGGGAAGACACGCCAACACTAAGGTGGGCCT...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCCGGCCGAAAGTGTCTaGGTTGACTCCCTCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILPAESV*VDSLRG
Trigger: ACCTCTGAGGGAGTCAACCAAGACACTTTCGGCCGG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp CCACCACTCTCTGGACAAACTCTTTCAACAGAGGGAAGCCGCTCCTaGCGCCCTCAGAGCCATCAAGCAGAAACACCACGTCCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: PPLSGQTLSTEGSRS*RPQSHQAETPRPFH
Trigger: GTGAAAAGGACGTGGTGTTTCTGCTTGATGGCTCTGAGGGCGTCAGGAGCGGCTTCCCTCTGTTGAAAGAGTTTGTCCAGAGAGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS TCA 90 bp GGAAAACTCTTGCAGTCCTTGCAGGAGGCTGGAGCCCAGGAGAACTaGACGGCCTTTGGTGGAAGACTGAGCTCCAAACTGGACCAAAAC +
Preference number: 5 (lower is better)
Translates to: GKLLQSLQEAGAQEN*TAFGGRLSSKLDQN
Trigger: GTTTTGGTCCAGTTTGGAGCTCAGTCTTCCACCAAAGGCCGTTCAGTTCTCCTGGGCTCCAGCCTCCTGCAAGGACTGCAAGAGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683145.1
CDS GCA 90 bp AAAAAGTGGAGACTCAGAGCTGCGGAGGAAAACTCTTGCAGTCCTTaGAGGAGGCTGGAGCCCAGGAGAACTGAACGGCCTTTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: KKWRLRAAEENSCSP*RRLEPRRTERPLVE
Trigger: TTCCACCAAAGGCCGTTCAGTTCTCCTGGGCTCCAGCCTCCTGCAAGGACTGCAAGAGTTTTCCTCCGCAGCTCTGAGTCTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000683145.1
CDS GCA 90 bp ATGACACGTGAGGACATTCTCCAGGAAGTCTGTGAGGTCTCTCCCTaGAGGCAGGACAAGCGCATGCCCCACTGCTGTGTTATTGATCTG +
Preference number: 5 (lower is better)
Translates to: MTREDILQEVCEVSP*RQDKRMPHCCVIDL
Trigger: CAGATCAATAACACAGCAGTGGGGCATGCGCTTGTCCTGCCTGCAGGGAGAGACCTCACAGACTTCCTGGAGAATGTCCTCACGTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
CDS GCA 90 bp CTGGGCATGGGGCCTAGAGCTCTTTCAGACTTCACCCTCTTATTCTaGGGTTACTCAGGGGAATCTTCCCAAGCACCCACATCGTGCCAA +
Preference number: 5 (lower is better)
Translates to: LGMGPRALSDFTLLF*GYSGESSQAPTSCQ
Trigger: TTGGCACGATGTGGGTGCTTGGGAAGATTCCCCTGAGTAACCGCAGAATAAGAGGGTGAAGTCTGAAAGAGCTCTAGGCCCCATGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS GCA 90 bp TGGACGTGTCTGAGAACCTTCTCAGAGCCCCAGAAGAAAGGGAGATaGCAACAGCACGCACAGAGCACAGACCTGCAAAGCGTTGATGAG +
Preference number: 5 (lower is better)
Translates to: WTCLRTFSEPQKKGR*QQHAQSTDLQSVDE
Trigger: CTCATCAACGCTTTGCAGGTCTGTGCTCTGTGCGTGCTGTTGGCATCTCCCTTTCTTCTGGGGCTCTGAGAAGGTTCTCAGACACGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS CCA 90 bp GAAAAAGTCCCACAAACTGTGAGGGGGAGCATGGGACGCTGGGCATaGGGCCTAGAGCTCTTTCAGACTTCACCCTCTTATTCTGCGGTT +
Preference number: 5 (lower is better)
Translates to: EKVPQTVRGSMGRWA*GLELFQTSPSYSAV
Trigger: AACCGCAGAATAAGAGGGTGAAGTCTGAAAGAGCTCTAGGCCCCATGCCCAGCGTCCCATGCTCCCCCTCACAGTTTGTGGGACTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTTCTGCACTTCATCCTaGCTGGAATGGGCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTFCTSS*LEWAFS
Trigger: GCTGAACGCCCATTCCAGCAAGGATGAAGTGCAGAA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGAGGGCATTGCCCACGTaGATCTGCCGCCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTRALPT*ICRPPL
Trigger: CAAGGGAGGGCGGCAGATCAACGTGGGCAATGCCCT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGACCAGGACCAGGTGTaGGGGCACCCCGTCTTCTAT +
Preference number: 5 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSDQDQV*GHPVFY
Trigger: ATAGAAGACGGGGTGCCCCAACACCTGGTCCTGGTC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTCTCTGCCCAGAGCACTaGCAGGGAACCCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSLCPEH*QGTPQQ
Trigger: TTGCTGTGGGGTTCCCTGCAAGTGCTCTGGGCAGAG...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTTGGATGAGGGCACATaGATCGATGGAGTCGCCCCT +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILLDEGT*IDGVAP
Trigger: AGGGGCGACTCCATCGATCAATGTGCCCTCATCCAA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCAAAGGCTAGTTCTGTaGGGAAGACGGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTQRLVL*GRRGTP
Trigger: TGGAGTGCCCCGTCTTCCCAACAGAACTAGCCTTTG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCGCAGGGGCCGGCTTaGCAGCGGCTGGCTTCACAG +
Preference number: 5 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSQGPA*QRLASQ
Trigger: CTGTGAAGCCAGCCGCTGCAAAGCCGGCCCCTGCGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTTTACAGCTGCTGGCTTaGCTGCTACAGGCTTCGCTG +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTLQLLA*LLQASL
Trigger: CAGCGAAGCCTGTAGCAGCAAAGCCAGCAGCTGTAA...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp ATGAACACCAGGGAGGAGTCGAAAGCGATCTCTTCCAGCTCAGCCTaGTCGGCACCCTTGTTCCCAATGGCAAAGGCCATTATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: MNTREESKAISSSSA*SAPLFPMAKAIMLL
Trigger: AAGCAGCATAATGGCCTTTGCCATTGGGAACAAGGGTGCCGATCAGGCTGAGCTGGAAGAGATCGCTTTCGACTCCTCCCTGGTGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000472056.5
CDS TCA 90 bp GTAGAGAAAGTCACGGACAACAGGGAACTGGCCCACAAGATTGGCTaGGCCGTCAAAGAGGAACAGAATGTCTCGCTTGCTCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VEKVTDNRELAHKIG*AVKEEQNVSLALWL
Trigger: CAGCCAGAGAGCAAGCGAGACATTCTGTTCCTCTTTGACGGCTCAGCCAATCTTGTGGGCCAGTTCCCTGTTGTCCGTGACTTTCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
CDS TCA 90 bp CGATCTGCTCTAACTCAGCAGGGTCTGCGTTCTTGGCTTGGAAGATaGAAGGCACAACCCCACTCTGCTTCAGGTTACTTGCTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: RSALTQQGLRSWLGR*KAQPHSASGYLLAH
Trigger: ATGGGCCAGCAAGTAACCTGAAGCAGAGTGGGGTTGTGCCTTTCATCTTCCAAGCCAAGAACGCAGACCCTGCTGAGTTAGAGCAGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS TCA 90 bp TCCCAGGCGGTCTTTGCAAAGTTAGGGTTGGTGTTGCAGAGGCTGTaGCCGACTAGCTCTGTTGTGGGGCTCAGTCATCTGCTACATCAA +
Preference number: 5 (lower is better)
Translates to: SQAVFAKLGLVLQRL*PTSSVVGLSHLLHQ
Trigger: TTGATGTAGCAGATGACTGAGCCCCACAACAGAGCTAGTCGGTCACAGCCTCTGCAACACCAACCCTAACTTTGCAAAGACCGCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS TCA 90 bp CAGCGCTCTATGCACAAATCATCCTGTGTTCGGCAGAACAAGCCCTaGGGAATGGCAGTGATGACCCAATGTCTTTCGCCGACACAGGCT +
Preference number: 5 (lower is better)
Translates to: QRSMHKSSCVRQNKP*GMAVMTQCLSPTQA
Trigger: AGCCTGTGTCGGCGAAAGACATTGGGTCATCACTGCCATTCCTCAGGGCTTGTTCTGCCGAACACAGGATGATTTGTGCATAGAGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS TCA 90 bp TGTGAGCCAGGCTTGCTGCTGGACTCTACTTACCTCAGGCTGACCTaGTGCCCCAACCCACGTTCTTCTTCCATTGAAGTGACACTAGAC +
Preference number: 5 (lower is better)
Translates to: CEPGLLLDSTYLRLT*CPNPRSSSIEVTLD
Trigger: GTCTAGTGTCACTTCAATGGAAGAAGAACGTGGGTTGGGGCATCAGGTCAGCCTGAGGTAAGTAGAGTCCAGCAGCAAGCCTGGCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683155.1
CDS GCA 90 bp GGAAGCGACTCTGCAGCCAGGATAAACGCTGGAGACAGCACGATCTaGTCTAACTCAGCAGGGTCTGCGTTCTTGGCTTGGAAGATGAAA +
Preference number: 5 (lower is better)
Translates to: GSDSAARINAGDSTI*SNSAGSAFLAWKMK
Trigger: TTTCATCTTCCAAGCCAAGAACGCAGACCCTGCTGAGTTAGAGCAGATCGTGCTGTCTCCAGCGTTTATCCTGGCTGCAGAGTCGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000472056.5
CDS GCA 90 bp AACTCTCGCACTGTGAAGACCAGTCTGGGGTCATTGGTGATGGTCTaGAGCTCTGTTCTGTCGATGTTCCGGTCTCCTACCCCTAAACTC +
Preference number: 5 (lower is better)
Translates to: NSRTVKTSLGSLVMV*SSVLSMFRSPTPKL
Trigger: GAGTTTAGGGGTAGGAGACCGGAACATCGACAGAACAGAGCTGCAGACCATCACCAATGACCCCAGACTGGTCTTCACAGTGCGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp GCTGTGTTATTGATCTGCAAAGCGTTGATGAGCTGCCGGTCTTCCTaGCTTGTAAGGAACAAGGGGGTGATCCCCGCATCTGAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: AVLLICKALMSCRSS*LVRNKGVIPASESL
Trigger: CAAGCTCTCAGATGCGGGGATCACCCCCTTGTTCCTTACAAGGCAGGAAGACCGGCAGCTCATCAACGCTTTGCAGATCAATAACACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
CDS GCA 90 bp TTATTCTGCGGTTACTCAGGGGAATCTTCCCAAGCACCCACATCGTaGCAAGAACCAGAAACCACACCTCATCAGCCCTGGGGAAACTCG +
Preference number: 5 (lower is better)
Translates to: LFCGYSGESSQAPTS*QEPETTPHQPWGNS
Trigger: CGAGTTTCCCCAGGGCTGATGAGGTGTGGTTTCTGGTTCTTGGCACGATGTGGGTGCTTGGGAAGATTCCCCTGAGTAACCGCAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS CCA 90 bp AGGCTTGGGTTAAAAGCAATCTGCTCAAGCTCTGCCTTATTCGCCTaGCTAGCTCCCACACAAAAAGTCAGGATGCCCGCGCGTGTCAAG +
Preference number: 5 (lower is better)
Translates to: RLGLKAICSSSALFA*LAPTQKVRMPARVK
Trigger: CTTGACACGCGCGGGCATCCTGACTTTTTGTGTGGGAGCTAGCCAGGCGAATAAGGCAGAGCTTGAGCAGATTGCTTTTAACCCAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
CDS CCA 90 bp ACAACACCTCCTAGTTGCAGACGCTCTCAGGGCCCAGAAAGCCAGTaGTCCCCACGAGAGCCTTTGAAGACTCCAGGAAGTCAGAATAAA +
Preference number: 5 (lower is better)
Translates to: TTPPSCRRSQGPESQ*SPREPLKTPGSQNK
Trigger: TTTATTCTGACTTCCTGGAGTCTTCAAAGGCTCTCGTGGGGACCACTGGCTTTCTGGGCCCTGAGAGCGTCTGCAACTAGGAGGTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473258.1
CDS CCA 90 bp CAGGGCCACCCTGGATATTCACCTTCAGGGCCGATTGGGACAGAGTaGAGACTGGAATGGGTATCATCAGCACATGGGTTTCAGAGTCTA +
Preference number: 5 (lower is better)
Translates to: QGHPGYSPSGPIGTE*RLEWVSSAHGFQSL
Trigger: TAGACTCTGAAACCCATGTGCTGATGATACCCATTCCAGTCTCCACTCTGTCCCAATCGGCCCTGAAGGTGAATATCCAGGGTGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCCAAGACAATGTGCCTTaGGGCCACGCCAACAATGTA +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTQDNVP*GHANNV
Trigger: TACATTGTTGGCGTGGCCCAAAGGCACATTGTCTTG...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCCAGGTTGAGGGCTTaGCCCGTCTTGATCTTCATT +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTPRLRA*PVLIFI
Trigger: AATGAAGATCAAGACGGGCAAAGCCCTCAACCTGGG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGTCTGCGTTCTTGGCTaGGAAGATGAAAGGCACAAC +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTVCVLG*EDERHN
Trigger: GTTGTGCCTTTCATCTTCCAAGCCAAGAACGCAGAC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGAAGACCACGTCCCTCTaGCCACCAACACCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTKTTSL*PPTPGL
Trigger: GAGCCCAGGTGTTGGTGGCAAGAGGGACGTGGTCTT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCTGTCCCTCCTGAAGTaGATGGAACCATCCAACAGG +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILLSLLK*MEPSNR
Trigger: CCTGTTGGATGGTTCCATCAACTTCAGGAGGGACAG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAGCTCCTGGACGTaGCCCACGCGGAACGCTGTG +
Preference number: 5 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRDSSWT*PTRNAV
Trigger: CACAGCGTTCCGCGTGGGCAACGTCCAGGAGCTGTC...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGACAGCTCCTGGACGTaGCCCACGCGGAACGCTGTG +
Preference number: 5 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNDSSWT*PTRNAV
Trigger: CACAGCGTTCCGCGTGGGCAACGTCCAGGAGCTGTC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTAAGATGGCGTCCACCTaGGACTCGAAGCCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSKMAST*DSKPFW
Trigger: CCAGAAGGGCTTCGAGTCCAAGGTGGACGCCATCTT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGGCACGGACTCCTTCTaGGCGGAGGTTCTCAGATGC +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMGTDSF*AEVLRC
Trigger: GCATCTGAGAACCTCCGCCAAGAAGGAGTCCGTGCC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCTCCAGGAATACCCTTaGGCCCGATGCTGCCGATGG +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTLQEYP*ARCCRW
Trigger: CCATCGGCAGCATCGGGCCAAAGGGTATTCCTGGAG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTCTCTCCTGGCTGTCTaGTCCTGGGTTACCCGGGTC +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMSLLAV*SWVTRV
Trigger: GACCCGGGTAACCCAGGACAAGACAGCCAGGAGAGA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTCCCGATTCCTCCTTTaGGTCCTGGCTCTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSRFLL*VLALRA
Trigger: AGCCCGGAGAGCCAGGACCAAAAGGAGGAATCGGGA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCCGAAAGTGTCTTGGTaGACTCCCTCAGAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTPKVSW*TPSEVS
Trigger: AGACACCTCTGAGGGAGTCAACCAAGACACTTTCGG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCGCTCTTGTGGGTGTGTaGCTGAAGAAAACAGCCACT +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTALVGV*LKKTAT
Trigger: AGTGGCTGTTTTCTTCAGCAACACACCCACAAGAGC...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGGTGGCATGCTGGCATaGTCCACGGACTCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: CYTTFKVFERTAWRQRARGGMLA*STDSEG
Trigger: GCCCTCTGAGTCCGTGGACAATGCCAGCATGCCACC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCAGGCTTCGCTGCCGTaGCTGGCTTCACCGCCACTG +
Preference number: 5 (lower is better)
Translates to: TPAVANCYTTFKVFERTAQASLP*LASPPL
Trigger: CAGTGGCGGTGAAGCCAGCAACGGCAGCGAAGCCTG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACCAGGCTTCGCTGCCGTaGCTGGCTTCACCGCCACTG +
Preference number: 5 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNQASLP*LASPPL
Trigger: CAGTGGCGGTGAAGCCAGCAACGGCAGCGAAGCCTG...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTCTCTCCCAGTGGAGTTaGGCGCTGTTCTCTGTTATC +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTLSQWS*ALFSVI
Trigger: GATAACAGAGAACAGCGCCAAACTCCACTGGGAGAG...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp CCTGTGTTCAGGCCCGAACCTCCCTGGAGCTGCAGCTGCCTCAGATaGCCAAGGATATCTGACTTGGTCTGGTATGTGTTTAAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: PVFRPEPPWSCSCLR*PRISDLVWYVFKEN
Trigger: GTTCTCTTTAAACACATACCAGACCAAGTCAGATATCCTTGGTCATCTGAGGCAGCTGCAGCTCCAGGGAGGTTCGGGCCTGAACACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
CDS TCA 90 bp GGTTTCGCAGGGGCCGGCTTTGCAGCGGCTGGCTTCACAGATGGCTaGTTTATAATAGTCACAGGCTTTGTTGTGGTGGTTACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: GFAGAGFAAAGFTDG*FIIVTGFVVVVTGF
Trigger: AAAGCCTGTAACCACCACAACAAAGCCTGTGACTATTATAAATCAGCCATCTGTGAAGCCAGCCGCTGCAAAGCCGGCCCCTGCGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000682957.1
ENST00000684508.1
CDS TCA 90 bp GTAGAGAAAGTCACGGACAACAGGGAACTGGCCCACAAGATTGGCTaGGCCGTCAAAGAGGAACAGAATGTCTCGCTTGCTCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VEKVTDNRELAHKIG*AVKEEQNVSLALFR
Trigger: CCTGAAGAGAGCAAGCGAGACATTCTGTTCCTCTTTGACGGCTCAGCCAATCTTGTGGGCCAGTTCCCTGTTGTCCGTGACTTTCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433762.1
ENST00000472056.5
CDS TCA 90 bp TCAGGCAGATGGCCTCATTGGGGACGTTTTAGGAGCTATGGGACATaGAGCCACAAAGGAGCATGGACGTGTCTGAGAACCTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SGRWPHWGRFRSYGT*SHKGAWTCLRTFSE
Trigger: CTCTGAGAAGGTTCTCAGACACGTCCATGCTCCTTTGTGGCTTCATGTCCCATAGCTCCTAAAACGTCCCCAATGAGGCCATCTGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS TCA 90 bp GTGTGTTACATGCAGGCTTTGAGGAACACACCCTGGAGCAGGAAATaGGGATGTCACAAGATGGCAGCCCTAGCAAGGGCTTTCTTACCC +
Preference number: 5 (lower is better)
Translates to: VCYMQALRNTPWSRK*GCHKMAALARAFLP
Trigger: GGGTAAGAAAGCCCTTGCTAGGGCTGCCATCTTGTGACATCCTCATTTCCTGCTCCAGGGTGTGTTCCTCAAAGCCTGCATGTAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684508.1
CDS GCA 90 bp CACAGGACTGAGGCTCAGAATTGGTCTAAAACATTTCCTGGTTGCTaGTGTCACCCAAATTCCAGGCTGGTGGCTGGTGGCTCCACAGTT +
Preference number: 5 (lower is better)
Translates to: HRTEAQNWSKTFPGC*CHPNSRLVAGGSTV
Trigger: AACTGTGGAGCCACCAGCCACCAGCCTGGAATTTGGGTGACAGCAGCAACCAGGAAATGTTTTAGACCAATTCTGAGCCTCAGTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473258.1
CDS CCA 90 bp ATGTGCCTTTGGGCCACGCCAACAATGTACGGCAGTAATTTCTCCTaGAGGTCCCCAAAGCTACGGAATTCCGGGACAGTAAACACCAAG +
Preference number: 5 (lower is better)
Translates to: MCLWATPTMYGSNFS*RSPKLRNSGTVNTK
Trigger: CTTGGTGTTTACTGTCCCGGAATTCCGTAGCTTTGGGGACCTCCAGGAGAAATTACTGCCGTACATTGTTGGCGTGGCCCAAAGGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392004.7
ENST00000433762.1
ENST00000491233.1
CDS CCA 90 bp CTAAAACATTTCCTGGTTGCTGCTGTCACCCAAATTCCAGGCTGGTaGCTGGTGGCTCCACAGTTACAACACCTCCTAGTTGCAGACGCT +
Preference number: 5 (lower is better)
Translates to: LKHFLVAAVTQIPGW*LVAPQLQHLLVADA
Trigger: AGCGTCTGCAACTAGGAGGTGTTGTAACTGTGGAGCCACCAGCCACCAGCCTGGAATTTGGGTGACAGCAGCAACCAGGAAATGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473258.1
CDS CCA 90 bp GGTCTAAAACATTTCCTGGTTGCTGCTGTCACCCAAATTCCAGGCTaGTGGCTGGTGGCTCCACAGTTACAACACCTCCTAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: GLKHFLVAAVTQIPG*WLVAPQLQHLLVAD
Trigger: GTCTGCAACTAGGAGGTGTTGTAACTGTGGAGCCACCAGCCACCAGCCTGGAATTTGGGTGACAGCAGCAACCAGGAAATGTTTTAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473258.1
CDS-3UTR CAA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTAACTGGCCCACAAGATaGGCTGAGCCGTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSNWPTR*AEPSKR
Trigger: CCTCTTTGACGGCTCAGCCAATCTTGTGGGCCAGTT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTTCTGCTTCAGGTTACTaGCTGGCCCATCCACACGGT +
Preference number: 5 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSSASGY*LAHPHG
Trigger: ACCGTGTGGATGGGCCAGCAAGTAACCTGAAGCAGA...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGGGTGCTGGTGCTCCGTaGTGCACTGATTTTAAGAGA +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILGAGAP*CTDFKR
Trigger: TCTCTTAAAATCAGTGCACAACGGAGCACCAGCACC...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACAGGGCATTGCCCACGTaGATCTGCCGCCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNRALPT*ICRPPL
Trigger: CAAGGGAGGGCGGCAGATCAACGTGGGCAATGCCCT...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTACCAGTCTGGGGTCATaGGTGATGGTCTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSTSLGS*VMVCSS
Trigger: AGAGCTGCAGACCATCACCAATGACCCCAGACTGGT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTATTAGCCGCTCCAAGTaGACCACTCGTTCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSISRSK*TTRSRP
Trigger: GGGCCTTGAACGAGTGGTCAACTTGGAGCGGCTAAT...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCTGATGACTCCGGGTTaGGCGAGCACAGGAGCGCAA +
Preference number: 5 (lower is better)
Translates to: CYTTFKVFERTAWRQRARLMTPG*ASTGAQ
Trigger: TTGCGCTCCTGTGCTCGCCAAACCCGGAGTCATCAG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp GTTCTGGGCTCATCGCTAAACTGGACCACCCCCACTCGGATCTGCTaGGTTCCAATTGGGAGTTTCTCAAGGAGATTTACAAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: VLGSSLNWTTPTRIC*VPIGSFSRRFTRKS
Trigger: CGACTTCCTTGTAAATCTCCTTGAGAAACTCCCAATTGGAACTCAGCAGATCCGAGTGGGGGTGGTCCAGTTTAGCGATGAGCCCAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392004.7
ENST00000433762.1
CDS TCA 90 bp AATCAAGGACGTTTCTGGCTCTTACCTGCTTGCTGCTGCTGGGCATaGGTTGTAGGAAAGCCTGAGAGAAAGAGGCAAAAGACGGCCACT +
Preference number: 5 (lower is better)
Translates to: NQGRFWLLPACCCWA*VVGKPERKRQKTAT
Trigger: AGTGGCCGTCTTTTGCCTCTTTCTCTCAGGCTTTCCTACAACTCATGCCCAGCAGCAGCAAGCAGGTAAGAGCCAGAAACGTCCTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683155.1
CDS CCA 90 bp ATGGCAAAGGCCATTATGCTGCTTCTCTTCAGCTCCTGGGCAGGCTaGCTGATTTCATCTAGGGACTTACCACCTGTGATCAGCACCAAA +
Preference number: 5 (lower is better)
Translates to: MAKAIMLLLFSSWAG*LISSRDLPPVISTK
Trigger: TTTGGTGCTGATCACAGGTGGTAAGTCCCTAGATGAAATCAGCCAGCCTGCCCAGGAGCTGAAGAGAAGCAGCATAATGGCCTTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000472056.5
CDS CCA 90 bp TTGTTCCCAATGGCAAAGGCCATTATGCTGCTTCTCTTCAGCTCCTaGGCAGGCTGGCTGATTTCATCTAGGGACTTACCACCTGTGATC +
Preference number: 5 (lower is better)
Translates to: LFPMAKAIMLLLFSS*AGWLISSRDLPPVI
Trigger: GATCACAGGTGGTAAGTCCCTAGATGAAATCAGCCAGCCTGCCCAGGAGCTGAAGAGAAGCAGCATAATGGCCTTTGCCATTGGGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000472056.5
CDS CCA 90 bp TCTTGTAGAGAAAGTCACGGACAACAGGGAACTGGCCCACAAGATTaGCTGAGCCGTCAAAGAGGAACAGAATGTCTCGCTTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SCRESHGQQGTGPQD*LSRQRGTECLACSL
Trigger: CAGAGAGCAAGCGAGACATTCTGTTCCTCTTTGACGGCTCAGCCAATCTTGTGGGCCAGTTCCCTGTTGTCCGTGACTTTCTCTACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
CDS CCA 90 bp GTGGGTTTGGGGCACTTTCAAAGACATTCTCTATGGTGTATTCAATaGCACTGCCTAAGGCCCTGGTTCCCTGCAACTGTGTCATTCCCC +
Preference number: 5 (lower is better)
Translates to: VGLGHFQRHSLWCIQ*HCLRPWFPATVSFP
Trigger: GGGGAATGACACAGTTGCAGGGAACCAGGGCCTTAGGCAGTGCCATTGAATACACCATAGAGAATGTCTTTGAAAGTGCCCCAAACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000682957.1
ENST00000684508.1
CDS CCA 90 bp CGGCACCTCGCCCGTCAGCATCAGGACCACAATTTTCAGGTCCCGTaGGTTTGGGGCACTTTCAAAGACATTCTCTATGGTGTATTCAAT +
Preference number: 5 (lower is better)
Translates to: RHLARQHQDHNFQVP*VWGTFKDILYGVFN
Trigger: ATTGAATACACCATAGAGAATGTCTTTGAAAGTGCCCCAAACCCACGGGACCTGAAAATTGTGGTCCTGATGCTGACGGGCGAGGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000682957.1
ENST00000684508.1
CDS CCA 90 bp CTAAGCTGGGGTGTGTGCTTAGGATGTCCGGACCAGAACACCCCATaGGTCAGATCCAAACCCATGCATTTCATGGATTCCAGCCAAATT +
Preference number: 5 (lower is better)
Translates to: LSWGVCLGCPDQNTP*VRSKPMHFMDSSQI
Trigger: AATTTGGCTGGAATCCATGAAATGCATGGGTTTGGATCTGACCCATGGGGTGTTCTGGTCCGGACATCCTAAGCACACACCCCAGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493608.1
CDS CCA 90 bp AGTCATCTGCTACATCAACCTAGGAACCTCACTCTCCACTTCCAATaGACCAGCCCAGTGATCTGCGGTGACCAGTTTGCCATTATTCGC +
Preference number: 5 (lower is better)
Translates to: SHLLHQPRNLTLHFQ*TSPVICGDQFAIIR
Trigger: GCGAATAATGGCAAACTGGTCACCGCAGATCACTGGGCTGGTCCATTGGAAGTGGAGAGTGAGGTTCCTAGGTTGATGTAGCAGATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTGCGGAGGAAAACTCTaGCAGTCCTTGCAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMCGGKL*QSLQEA
Trigger: AGCCTCCTGCAAGGACTGCAAGAGTTTTCCTCCGCA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTGCGGAGGAAAACTCTaGCAGTCCTTGCAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTCGGKL*QSLQEA
Trigger: AGCCTCCTGCAAGGACTGCAAGAGTTTTCCTCCGCA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGAACTGGCCCACAAGATaGGCTGAGCCGTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTNWPTR*AEPSKR
Trigger: CCTCTTTGACGGCTCAGCCAATCTTGTGGGCCAGTT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCCCTCTGGCTTCACATaGAGCTCATCGATAATCTTG +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILPSGFT*SSSIIL
Trigger: CAAGATTATCGATGAGCTCAATGTGAAGCCAGAGGG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTAGGGCTTTGCCCGTCTaGATCTTCATTCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTRALPV*IFILFT
Trigger: TGTGAAGAGAATGAAGATCAAGACGGGCAAAGCCCT...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTCTGCTTCAGGTTACTaGCTGGCCCATCCACACGGT +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSASGY*LAHPHG
Trigger: ACCGTGTGGATGGGCCAGCAAGTAACCTGAAGCAGA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGAGCTGGCGGACAGCGTaGACGACGTCCTGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQSWRTA*TTSCLF
Trigger: GAACAAGCAGGACGTCGTCAACGCTGTCCGCCAGCT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAAAGACCACGTCCCTCTaGCCACCAACACCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGKTTSL*PPTPGL
Trigger: GAGCCCAGGTGTTGGTGGCAAGAGGGACGTGGTCTT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAACGTACTCCAGGGCATaGCCCACGTTGATCTGCCGC +
Preference number: 5 (lower is better)
Translates to: TVTQHSKYSRELPGDRERTYSRA*PTLICR
Trigger: GCGGCAGATCAACGTGGGCAATGCCCTGGAGTACGT...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAACGTACTCCAGGGCATaGCCCACGTTGATCTGCCGC +
Preference number: 5 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGTYSRA*PTLICR
Trigger: GCGGCAGATCAACGTGGGCAATGCCCTGGAGTACGT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGGCCACGCCAAACTGCTaGAGCTCCACCGCCGGGTCG +
Preference number: 5 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSATPNC*SSTAGS
Trigger: CGACCCGGCGGTGGAGCTCAAGCAGTTTGGCGTGGC...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGACCAGGACCAGGTGTaGGGGCACCCCGTCTTCTAT +
Preference number: 5 (lower is better)
Translates to: TVTQHSKYSRELPGDRERDQDQV*GHPVFY
Trigger: ATAGAAGACGGGGTGCCCCAACACCTGGTCCTGGTC...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTCAGTGGGGTCAGAGTaGTACTGGACAAGCCCCACT +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSVGSE*YWTSPT
Trigger: AGTGGGGCTTGTCCAGTACAACTCTGACCCCACTGA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAAGATGGCGTCCACCTaGGACTCGAAGCCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CYTTFKVFERTAWRQRARKMAST*DSKPFW
Trigger: CCAGAAGGGCTTCGAGTCCAAGGTGGACGCCATCTT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGCTCCAGGAATACCCTTaGGCCCGATGCTGCCGATGG +
Preference number: 5 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQLQEYP*ARCCRW
Trigger: CCATCGGCAGCATCGGGCCAAAGGGTATTCCTGGAG...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGATCTCTCCTGGCTGTCTaGTCCTGGGTTACCCGGGTC +
Preference number: 5 (lower is better)
Translates to: TVTQHSKYSRELPGDRERSLLAV*SWVTRV
Trigger: GACCCGGGTAACCCAGGACAAGACAGCCAGGAGAGA...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGTGGCCAGGACCGCCCTaGTTGCCCTTAGCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSWPGPP*LPLAPG
Trigger: CCCCGGAGCTAAGGGCAACAAGGGCGGTCCTGGCCA...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCCCCGCATCTGAGAGCTaGAGCACAGCCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: TPAVANCYTTFKVFERTAPASES*STASLS
Trigger: GCTCAGAGAGGCTGTGCTCAAGCTCTCAGATGCGGG...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAAAGTGCTGGGAGGCCTaGGGATCTGGGCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: TVTQHSKYSRELPGDRERKCWEA*GSGLMS
Trigger: GGACATGAGCCCAGATCCCAAGGCCTCCCAGCACTT...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCTTGAGCTCGGTGGACTaGTCCACTAATTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FERTAWRQRARVHRHISTLSSVD*STNLKK
Trigger: CTTCTTCAAATTAGTGGACAAGTCCACCGAGCTCAA...GGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCTAGGGACCTCAGGCTaGGTCGCCACTGGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: CYTTFKVFERTAWRQRARLGTSG*VATGFA
Trigger: TGCAAAACCAGTGGCGACCAAGCCTGAGGTCCCTAG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp CAATACTCAAGACCACATCTCGCATCCGGCCGAAAGTGTCTTGGTTaGCTCCCTCAGAGGTGTCTAAAGCAAAGGCTAGTTCTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: QYSRPHLASGRKCLG*LPQRCLKQRLVLLG
Trigger: TCCCAACAGAACTAGCCTTTGCTTTAGACACCTCTGAGGGAGTCAACCAAGACACTTTCGGCCGGATGCGAGATGTGGTCTTGAGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
CDS GCA 90 bp CATGAGATACACCAGGCTTGGGTTAAAAGCAATCTGCTCAAGCTCTaGCTTATTCGCCTGGCTAGCTCCCACACAAAAAGTCAGGATGCC +
Preference number: 5 (lower is better)
Translates to: HEIHQAWVKSNLLKL*LIRLASSHTKSQDA
Trigger: GGCATCCTGACTTTTTGTGTGGGAGCTAGCCAGGCGAATAAGGCAGAGCTTGAGCAGATTGCTTTTAACCCAAGCCTGGTGTATCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
CDS GCA 90 bp AGCCCATACTCTTGTGTGACAATGGTTGGCGGTTTCAAGACAATGTaGCTTTGGGCCACGCCAACAATGTACGGCAGTAATTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SPYSCVTMVGGFKTM*LWATPTMYGSNFSW
Trigger: CCAGGAGAAATTACTGCCGTACATTGTTGGCGTGGCCCAAAGGCACATTGTCTTGAAACCGCCAACCATTGTCACACAAGAGTATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491233.1
CDS CCA 90 bp ATGACTTGTGTGACAATGGTTGGCGGTTTCAAGACAATGTGCCTTTaGGCCACGCCAACAATGTACGGCAGTAATTTCTCCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: MTCVTMVGGFKTMCL*ATPTMYGSNFSWRS
Trigger: GGACCTCCAGGAGAAATTACTGCCGTACATTGTTGGCGTGGCCCAAAGGCACATTGTCTTGAAACCGCCAACCATTGTCACACAAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392004.7
ENST00000433762.1
CDS CCA 90 bp CTCCCTGGAGCTGCAGCTGCCTCAGATGACCAAGGATATCTGACTTaGTCTGGTATGTGTTTAAAGAGAACTCCGTTACAGGAGTGTCAC +
Preference number: 5 (lower is better)
Translates to: LPGAAAASDDQGYLT*SGMCLKRTPLQECH
Trigger: GTGACACTCCTGTAACGGAGTTCTCTTTAAACACATACCAGACCAAGTCAGATATCCTTGGTCATCTGAGGCAGCTGCAGCTCCAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
CDS CCA 90 bp CAAAGCTGGCAGGGAGCTGAAATCATCCATGAGATACACCAGGCTTaGGTTAAAAGCAATCTGCTCAAGCTCTGCCTTATTCGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: QSWQGAEIIHEIHQA*VKSNLLKLCLIRLA
Trigger: AGCCAGGCGAATAAGGCAGAGCTTGAGCAGATTGCTTTTAACCCAAGCCTGGTGTATCTCATGGATGATTTCAGCTCCCTGCCAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
CDS CCA 90 bp CTTGACATCATCGCTGTACTGAGCCACCGCAATTCGGGTCCCCTCTaGCTTCACATTGAGCTCATCGATAATCTTGTAGAGAAAGTCACG +
Preference number: 5 (lower is better)
Translates to: LDIIAVLSHRNSGPL*LHIELIDNLVEKVT
Trigger: CGTGACTTTCTCTACAAGATTATCGATGAGCTCAATGTGAAGCCAGAGGGGACCCGAATTGCGGTGGCTCAGTACAGCGATGATGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000472056.5
CDS CCA 90 bp CTGATTCTGTTCAAGATGGCGTCCACCTTGGACTCGAAGCCCTTCTaGGCCACAAAAACATTCTGGTCTCTAGAACCATCAAACCCCAGA +
Preference number: 5 (lower is better)
Translates to: LILFKMASTLDSKPF*ATKTFWSLEPSNPR
Trigger: TCTGGGGTTTGATGGTTCTAGAGACCAGAATGTTTTTGTGGCCCAGAAGGGCTTCGAGTCCAAGGTGGACGCCATCTTGAACAGAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS CCA 90 bp TCTTGTAGAGAAAGTCACGGACAACAGGGAACTGGCCCACAAGATTaGCTGAGCCGTCAAAGAGGAACAGAATGTCTCGCTTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SCRESHGQQGTGPQD*LSRQRGTECLACSL
Trigger: AAGAGAGCAAGCGAGACATTCTGTTCCTCTTTGACGGCTCAGCCAATCTTGTGGGCCAGTTCCCTGTTGTCCGTGACTTTCTCTACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433762.1
ENST00000472056.5
CDS CCA 90 bp CACGATGGACCAGACTCAAAGGTGCACAGGACTGAGGCTCAGAATTaGTCTAAAACATTTCCTGGTTGCTGCTGTCACCCAAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: HDGPDSKVHRTEAQN*SKTFPGCCCHPNSR
Trigger: CCTGGAATTTGGGTGACAGCAGCAACCAGGAAATGTTTTAGACCAATTCTGAGCCTCAGTCCTGTGCACCTTTGAGTCTGGTCCATCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473258.1
CDS CCA 90 bp TACTCTTGTGTGACAATGGTTGGCGGTTTCAAGACAATGTGCCTTTaGGCCACGCCAACAATGTACGGCAGTAATTTCTCCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: YSCVTMVGGFKTMCL*ATPTMYGSNFSWRS
Trigger: GGACCTCCAGGAGAAATTACTGCCGTACATTGTTGGCGTGGCCCAAAGGCACATTGTCTTGAAACCGCCAACCATTGTCACACAAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491233.1
CDS-3UTR CAA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGGCAGCCGCACCATTTTaGACATCTGCTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CYTTFKVFERTAWRQRARAAAPF*TSACCC
Trigger: GCAGCAGCAAGCAGATGTCAAAAATGGTGCGGCTGC...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGCCCAGGTTGAGGGCTTaGCCCGTCTTGATCTTCATT +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMPRLRA*PVLIFI
Trigger: AATGAAGATCAAGACGGGCAAAGCCCTCAACCTGGG...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCAGCAGGAACTCCACCTaGGGGTCATCGCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: TPAVANCYTTFKVFERTASRNST*GSSLNW
Trigger: CCAGTTCAGCGATGACCCCAAGGTGGAGTTCCTGCT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGAGCAGGAACTCCACCTaGGGGTCATCGCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQSRNST*GSSLNW
Trigger: CCAGTTCAGCGATGACCCCAAGGTGGAGTTCCTGCT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTCTGGGAAGACATCATaGCTGAACTGCACGACCCCA +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTSGKTS*LNCTTP
Trigger: TGGGGTCGTGCAGTTCAGCAATGATGTCTTCCCAGA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGACAAATTCGAGAGCCTaGCCAGTGTTCAGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTTNSRA*PVFSGD
Trigger: GTCCCCACTGAACACTGGCAAGGCTCTCGAATTTGT...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACTGGACAAGCCCCACTaGGATGGAGTCGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRLDKPH*DGVAIF
Trigger: GAAGATGGCGACTCCATCCAAGTGGGGCTTGTCCAG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACTGGACAAGCCCCACTaGGATGGAGTCGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: TVTQHSKYSRELPGDRERLDKPH*DGVAIF
Trigger: GAAGATGGCGACTCCATCCAAGTGGGGCTTGTCCAG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAGGTCCAGAAATGCCTaGTTCTCCTATCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMRSRNA*FSYQPW
Trigger: CCAGGGCTGATAGGAGAACAAGGCATTTCTGGACCT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGACACCTGGGTTACCCTTaGGTCCTGGGTATCCAGGGA +
Preference number: 5 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGHLGYP*VLGIQG
Trigger: TCCCTGGATACCCAGGACCAAAGGGTAACCCAGGTG...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCGGCCTCTGATGCCTTaGGGTCCTGTTGTTCCATTT +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTRPLMP*GPVVPF
Trigger: AAATGGAACAACAGGACCCAAAGGCATCAGAGGCCG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCCGAAAGTGTCTTGGTaGACTCCCTCAGAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTPKVSW*TPSEVS
Trigger: AGACACCTCTGAGGGAGTCAACCAAGACACTTTCGG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGACCGGCCGAAAGTGTCTaGGTTGACTCCCTCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRPAESV*VDSLRG
Trigger: ACCTCTGAGGGAGTCAACCAAGACACTTTCGGCCGG...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGTTGATCTGCAAAGCGTaGATGAGCTGCCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMLICKA*MSCRSS
Trigger: GGAAGACCGGCAGCTCATCAACGCTTTGCAGATCAA...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp GCAAGGGAATCTACACCCGGAGCTTCTACAGAGACAAGTTGGCGATGGCTGACTTACTTCTTCATCTCATaGAACTGGAACAGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ARESTPGASTETSWRWLTYFFIS*NWNRVV
Trigger: CACCACCCTGTTCCAGTTCAATGAGATGAAGAAGTA...AGTCAGCCATCGCCAACTTGTCTCTGTAGAAGCTCCGGGTGTAGATTCCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTGGGCTCATGTCCAGTaGTCTGACCAGGTACGCTAT +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTWAHVQ*SDQVRY
Trigger: ATAGCGTACCTGGTCAGACAACTGGACATGAGCCCA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGGTGGCATGCTGGCATaGTCCACGGACTCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: HETPEGIWIDRNVHINTSGGMLA*STDSEG
Trigger: GCCCTCTGAGTCCGTGGACAATGCCAGCATGCCACC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCTCCATACCAGAATCTaGCACAGCTTTTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILLHTRI*HSFWCL
Trigger: CAAACACCAAAAGCTGTGCAAGATTCTGGTATGGAG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGCAGGGAATGAAAAAGTaGGTCTCTTGTTTCTCCACG +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILQGMKK*VSCFST
Trigger: CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTG...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGACTTCAATGACTGCTaGCTGCTGCTGGGCATGAGT +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMDFNDC*LLLGMS
Trigger: ACTCATGCCCAGCAGCAGCAAGCAGTCATTGAAGTC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472056.5
CDS GCA 90 bp TCCAGGAAGTCTGTGAGGTCTCTCCCTGCAGGCAGGACAAGCGCATaGCCCACTGCTGTGTTATTGATCTGGTTTAAACAAAAGAACAAT +
Preference number: 5 (lower is better)
Translates to: SRKSVRSLPAGRTSA*PTAVLLIWFKQKNN
Trigger: ATTGTTCTTTTGTTTAAACCAGATCAATAACACAGCAGTGGGGCATGCGCTTGTCCTGCCTGCAGGGAGAGACCTCACAGACTTCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS CCA 90 bp ATCGCTAAACTGGACCACCCCCACTCGGATCTGCTGAGTTCCAATTaGGAGTTTCTCAAGGAGATTTACAAGGAAGTCGAGAATGACTGC +
Preference number: 5 (lower is better)
Translates to: IAKLDHPHSDLLSSN*EFLKEIYKEVENDC
Trigger: GCAGTCATTCTCGACTTCCTTGTAAATCTCCTTGAGAAACTCCCAATTGGAACTCAGCAGATCCGAGTGGGGGTGGTCCAGTTTAGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392004.7
ENST00000433762.1
CDS CCA 90 bp GCGTCCACCTTGGACTCGAAGCCCTTCTGGGCCACAAAAACATTCTaGTCTCTAGAACCATCAAACCCCAGAATCACATCCAGATTACAA +
Preference number: 5 (lower is better)
Translates to: ASTLDSKPFWATKTF*SLEPSNPRITSRLQ
Trigger: TTGTAATCTGGATGTGATTCTGGGGTTTGATGGTTCTAGAGACCAGAATGTTTTTGTGGCCCAGAAGGGCTTCGAGTCCAAGGTGGACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATTAGCACCATACTGATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTTGACTTCAATGACTaGTGTGACAATGGTTGGCGG +
Preference number: 5 (lower is better)
Translates to: ISTILIGHAAGCSLPSSSVDFND*CDNGWR
Trigger: CCGCCAACCATTGTCACACAAGTCATTGAAGTCAAC...ACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTATCAGTATGGTGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295550.9
CDS-3UTR CAA 90 bp TGGTCTCTTGTTTCTCCACGATACACAGGCTTCCCATCTAAAGTCATGCTTAACGCAGGGTCTGCGTTCTaGGCTTGGAAGATGAAAGGC +
Preference number: 5 (lower is better)
Translates to: WSLVSPRYTGFPSKVMLNAGSAF*AWKMKG
Trigger: GCCTTTCATCTTCCAAGCCAAGAACGCAGACCCTGC...GTTAAGCATGACTTTAGATGGGAAGCCTGTGTATCGTGGAGAAACAAGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGGGTGCTGGTGCTCCGTaGTGCACTGATTTTAAGAGA +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMGAGAP*CTDFKR
Trigger: TCTCTTAAAATCAGTGCACAACGGAGCACCAGCACC...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCAGCTGGCGGACAGCGTaGACGACGTCCTGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: HETPEGIWIDRNVHINTSSWRTA*TTSCLF
Trigger: GAACAAGCAGGACGTCGTCAACGCTGTCCGCCAGCT...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCTCAGAGATGACCTGTaGGACGGTCCCCAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSLRDDL*DGPQLA
Trigger: CGCCAGCTGGGGACCGTCCAACAGGTCATCTCTGAG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGACCAGTCTGGGGTCATaGGTGATGGTCTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQTSLGS*VMVCSS
Trigger: AGAGCTGCAGACCATCACCAATGACCCCAGACTGGT...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCGGCACGGACTCCTTCTaGGCGGAGGTTCTCAGATGC +
Preference number: 5 (lower is better)
Translates to: HETPEGIWIDRNVHINTSGTDSF*AEVLRC
Trigger: GCATCTGAGAACCTCCGCCAAGAAGGAGTCCGTGCC...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCATTAGCCGCTCCAAGTaGACCACTCGTTCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: TPAVANCYTTFKVFERTAISRSK*TTRSRP
Trigger: GGGCCTTGAACGAGTGGTCAACTTGGAGCGGCTAAT...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGAGGTCCAGAAATGCCTaGTTCTCCTATCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: CYTTFKVFERTAWRQRARRSRNA*FSYQPW
Trigger: CCAGGGCTGATAGGAGAACAAGGCATTTCTGGACCT...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGTGCCTTTGGGTCCTGTaGTTCCATTTAGCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTCLWVL*FHLAQV
Trigger: AACCTGGGCTAAATGGAACAACAGGACCCAAAGGCA...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATTGGATGAGGGCACATaGATCGATGGAGTCGCCCCT +
Preference number: 5 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRLDEGT*IDGVAP
Trigger: AGGGGCGACTCCATCGATCAATGTGCCCTCATCCAA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAAGGACCGACTTCCTCTaGGAGTCAGCAAACCGGATC +
Preference number: 5 (lower is better)
Translates to: TVTQHSKYSRELPGDRERRTDFL*ESANRI
Trigger: GATCCGGTTTGCTGACTCCAAGAGGAAGTCGGTCCT...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCCCGCATCTGAGAGCTaGAGCACAGCCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: HETPEGIWIDRNVHINTSPASES*STASLS
Trigger: GCTCAGAGAGGCTGTGCTCAAGCTCTCAGATGCGGG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGTCTGGGAAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGCAGGATGGGTCGATGTaGCAGATGTCCAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: SLGNWGQGMKKLVSCFSTQDGSM*QMSKQT
Trigger: TGTTTGCTTGGACATCTGCAACATCGACCCATCCTG...CGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTTCCCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAATCAAAGGCTCCTCGTaGAGCTCGGTGGACTTGTCC +
Preference number: 5 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRIKGSS*SSVDLS
Trigger: GGACAAGTCCACCGAGCTCAACGAGGAGCCTTTGAT...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGACTTCACAAGGTTCTTaGTGGGTTGGTCCCCTTGGA +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMTSQGS*WVGPLG
Trigger: TCCAAGGGGACCAACCCACAAAGAACCTTGTGAAGT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGATTACAGCTGCTGGCTTaGCTGCTACAGGCTTCGCTG +
Preference number: 5 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRLQLLA*LLQASL
Trigger: CAGCGAAGCCTGTAGCAGCAAAGCCAGCAGCTGTAA...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AGAACTGCCTGGAGACAGAGAGCGAGGGTCCACAGACACATTAGCACCATACTGTCTTTAATTAAGGCATaGGTCCCAACGGTGCACATA +
Preference number: 5 (lower is better)
Translates to: RTAWRQRARVHRHISTILSLIKA*VPTVHI
Trigger: TATGTGCACCGTTGGGACCAATGCCTTAATTAAAGA...CAGTATGGTGCTAATGTGTCTGTGGACCCTCGCTCTCTGTCTCCAGGCAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS TCA 90 bp AATGAAGTCTCGGATGGCATTGAAGTTGGCCAGTCCCAGTGCAGATaGGCCATCCACCAGGAAGACTATGTCTCTCTTGTTGACTTCAAT +
Preference number: 5 (lower is better)
Translates to: NEVSDGIEVGQSQCR*AIHQEDYVSLVDFN
Trigger: ATTGAAGTCAACAAGAGAGACATAGTCTTCCTGGTGGATGGCTCATCTGCACTGGGACTGGCCAACTTCAATGCCATCCGAGACTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392003.6
ENST00000392004.7
ENST00000433762.1
ENST00000472056.5
ENST00000682405.1
CDS TCA 90 bp CCATCAAAATTTATTCCTCATTTACTGGTGGCTTCCCTGTTAGCGTaGGGCCGGCGTCAAATGATCTCCCTATTCTTCCTTCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: PSKFIPHLLVASLLA*GRRQMISLFFLPSQ
Trigger: CTGGGAAGGAAGGAAGAATAGGGAGATCATTTGACGCCGGCCTCACGCTAACAGGGAAGCCACCAGTAAATGAGGAATAAATTTTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473258.1
CDS TCA 90 bp GGTAGGGCTCACGACTTGGCAACATCTTCCTGGATGCTCCAGAGGTaGCCTTTAGTTCAAACATGTGGGCTTACTTCACAAGTAATCCAT +
Preference number: 5 (lower is better)
Translates to: GRAHDLATSSWMLQR*PLVQTCGLTSQVIH
Trigger: ATGGATTACTTGTGAAGTAAGCCCACATGTTTGAACTAAAGGTCACCTCTGGAGCATCCAGGAAGATGTTGCCAAGTCGTGAGCCCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491769.1
CDS TCA 90 bp CTACGCTTGATCCAGTTGTCTGAACACTCTGAGCAAGGAAACAAATaGAACCTCGCTGGCAAAAAGTCACTGCCAGCTTCCAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LRLIQLSEHSEQGNK*NLAGKKSLPASKAS
Trigger: GGAAGCTTTGGAAGCTGGCAGTGACTTTTTGCCAGCGAGGTTTCATTTGTTTCCTTGCTCAGAGTGTTCAGACAACTGGATCAAGCGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683145.1
CDS GCA 90 bp ACTTCAATGACTTGTGTGACAATGGTTGGCGGTTTCAAGACAATGTaGCTTTGGGCCACGCCAACAATGTACGGCAGTAATTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TSMTCVTMVGGFKTM*LWATPTMYGSNFSW
Trigger: CCAGGAGAAATTACTGCCGTACATTGTTGGCGTGGCCCAAAGGCACATTGTCTTGAAACCGCCAACCATTGTCACACAAGTCATTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000392004.7
ENST00000433762.1
CDS GCA 90 bp ACTCCATTTACACCTGGGATTATGCAGAATAAGATGATGTTGGGCTaGACAGAGCTGACGTGGACCTTTTCCCCCATAGAAGTCATGCCT +
Preference number: 5 (lower is better)
Translates to: TPFTPGIMQNKMMLG*TELTWTFSPIEVMP
Trigger: AGGCATGACTTCTATGGGGGAAAAGGTCCACGTCAGCTCTGTGCAGCCCAACATCATCTTATTCTGCATAATCCCAGGTGTAAATGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493608.1
CDS CCA 90 bp ATTCGTCAGTGGGGTCAGAGTTGTACTGGACAAGCCCCACTTGGATaGAGTCGCCATCTTCATAAACTGTGTCCACTATTTCAGACACAA +
Preference number: 5 (lower is better)
Translates to: IRQWGQSCTGQAPLG*SRHLHKLCPLFQTQ
Trigger: TTGTGTCTGAAATAGTGGACACAGTTTATGAAGATGGCGACTCCATCCAAGTGGGGCTTGTCCAGTACAACTCTGACCCCACTGACGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
ENST00000684597.1
CDS CCA 90 bp TTCACAATACTCAAGACCACATCTCGCATCCGGCCGAAAGTGTCTTaGTTGACTCCCTCAGAGGTGTCTAAAGCAAAGGCTAGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: FTILKTTSRIRPKVS*LTPSEVSKAKASSV
Trigger: AACAGAACTAGCCTTTGCTTTAGACACCTCTGAGGGAGTCAACCAAGACACTTTCGGCCGGATGCGAGATGTGGTCTTGAGTATTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295550.9
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
CDS CCA 90 bp AGTTGTCTGACCAGGTACGCTATGTACTTCTTCATCTCATTGAACTaGAACAGGGTGGTGGTCTCAGCGCTGTCTAAGATGAAAGCCATG +
Preference number: 5 (lower is better)
Translates to: SCLTRYAMYFFISLN*NRVVVSALSKMKAM
Trigger: CATGGCTTTCATCTTAGACAGCGCTGAGACCACCACCCTGTTCCAGTTCAATGAGATGAAGAAGTACATAGCGTACCTGGTCAGACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295550.9
ENST00000347401.8
ENST00000353578.9
ENST00000472056.5
ENST00000491769.1
ENST00000684508.1
CDS-3UTR CAA 90 bp TCAAAGCATGAAATGATACAGTGCAAGGGAATCTACACCCGGAGCTTCTACAGAAAGTCTCGGATGGCATaGAAGTTGGCCAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SKHEMIQCKGIYTRSFYRKSRMA*KLASPS
Trigger: ACTGGGACTGGCCAACTTCAATGCCATCCGAGACTT...TCTGTAGAAGCTCCGGGTGTAGATTCCCTTGCACTGTATCATTTCATGCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGATTCTGCACTTCATCCTaGCTGGAATGGGCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: TVTQHSKYSRELPGDRERFCTSS*LEWAFS
Trigger: GCTGAACGCCCATTCCAGCAAGGATGAAGTGCAGAA...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGTTACTGGGGCCGATGTaGAGTCTTCGAACAATCCTG +
Preference number: 5 (lower is better)
Translates to: CYTTFKVFERTAWRQRARLLGPM*SLRTIL
Trigger: CAGGATTGTTCGAAGACTCAACATCGGCCCCAGTAA...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCTGGGAAGACATCATaGCTGAACTGCACGACCCCA +
Preference number: 5 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSGKTS*LNCTTP
Trigger: TGGGGTCGTGCAGTTCAGCAATGATGTCTTCCCAGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAACAAATTCGAGAGCCTaGCCAGTGTTCAGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGTNSRA*PVFSGD
Trigger: GTCCCCACTGAACACTGGCAAGGCTCTCGAATTTGT...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACTGTCCCTCCTGAAGTaGATGGAACCATCCAACAGG +
Preference number: 5 (lower is better)
Translates to: TVTQHSKYSRELPGDRERLSLLK*MEPSNR
Trigger: CCTGTTGGATGGTTCCATCAACTTCAGGAGGGACAG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGCTCTGCCCAGAGCACTaGCAGGGAACCCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSLCPEH*QGTPQQ
Trigger: TTGCTGTGGGGTTCCCTGCAAGTGCTCTGGGCAGAG...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGAGGCCTCTTTCTCCTTTTTaGCCTCTGCGTCCTTCACTG +
Preference number: 5 (lower is better)
Translates to: CYTTFKVFERTAWRQRARPLSPF*PLRPSL
Trigger: CAGTGAAGGACGCAGAGGCAAAAAAGGAGAAAGAGG...CCTCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CATGAAACTCCAGAGGGAATTTGGATTGATAGGAATGTTCACATAAACACCAGCCACCTGGGTTACCCTTaGGTCCTGGGTATCCAGGGA +
Preference number: 5 (lower is better)
Translates to: HETPEGIWIDRNVHINTSHLGYP*VLGIQG
Trigger: TCCCTGGATACCCAGGACCAAAGGGTAACCCAGGTG...GCTGGTGTTTATGTGAACATTCCTATCAATCCAAATTCCCTCTGGAGTTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGAGACAGAGAGCGACGGCCTCTGATGCCTTaGGGTCCTGTTGTTCCATTT +
Preference number: 5 (lower is better)
Translates to: TVTQHSKYSRELPGDRERRPLMP*GPVVPF
Trigger: AAATGGAACAACAGGACCCAAAGGCATCAGAGGCCG...TCGCTCTCTGTCTCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATTGATCTGCAAAGCGTaGATGAGCTGCCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGLICKA*MSCRSS
Trigger: GGAAGACCGGCAGCTCATCAACGCTTTGCAGATCAA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGGCTCATGTCCAGTaGTCTGACCAGGTACGCTAT +
Preference number: 5 (lower is better)
Translates to: TPAVANCYTTFKVFERTAWAHVQ*SDQVRY
Trigger: ATAGCGTACCTGGTCAGACAACTGGACATGAGCCCA...GGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp TGTTCACATAAACACCAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAAGTGCTGGGAGGCCTaGGGATCTGGGCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: CSHKHQQWLTVTQHSKYSKCWEA*GSGLMS
Trigger: GGACATGAGCCCAGATCCCAAGGCCTCCCAGCACTT...CGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTGGTGTTTATGTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp CAGCAGTGGCTAACTGTTACACAACATTCAAAGTATTCGAGAGAACTGCCTGGATCAGGTCCCGTGGGTTaGGGGCACTTTCAAAGACAT +
Preference number: 5 (lower is better)
Translates to: QQWLTVTQHSKYSRELPGSGPVG*GHFQRH
Trigger: ATGTCTTTGAAAGTGCCCCAAACCCACGGGACCTGA...TCCAGGCAGTTCTCTCGAATACTTTGAATGTTGTGTAACAGTTAGCCACTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp AAATTGGGGGCAGGGAATGAAAAAGTTGGTCTCTTGTTTCTCCACGATACACAGTCAGGTCCCGTGGGTTaGGGGCACTTTCAAAGACAT +
Preference number: 5 (lower is better)
Translates to: KLGAGNEKVGLLFLHDTQSGPVG*GHFQRH
Trigger: ATGTCTTTGAAAGTGCCCCAAACCCACGGGACCTGA...CTGTGTATCGTGGAGAAACAAGAGACCAACTTTTTCATTCCCTGCCCCCAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5
CDS-3UTR CAA 90 bp ATAGGTCATGCAGCAGGATGTTCCCTCCCGAGTTCGAGTGTAAATCAAAGCATGAAGGTGTATACCTCCTaGATGTTCACCTTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: IGHAAGCSLPSSSVNQSMKVYTS*MFTFLP
Trigger: TGGCAGGAAGGTGAACATCAAGGAGGTATACACCTT...CATGCTTTGATTTACACTCGAACTCGGGAGGGAACATCCTGCTGCATGACCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295550.9
ENST00000472056.5