RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL6A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000142173

Ensembl transcript IDs: ENST00000300527.9, ENST00000310645.9, ENST00000397763.5, ENST00000409416.6, ENST00000413758.1, ENST00000436769.5, ENST00000460886.1, ENST00000485591.1

Found 823 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATaGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGC +
Preference number: 1 (lower is better)
Translates to: EQRCWPCGTRARLAP*TGWAHDPRLRGPGG
Trigger: GCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
3UTR GCA 90 bp AGCTGGAGAGGTGCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTaGTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGG +
Preference number: 1 (lower is better)
Translates to: SWRGAGPGRRPSEQR*WPCGTRARLAPWTG
Trigger: CCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGCACCTCTCCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
3UTR CCA 90 bp TGGAGAGGTGCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTaGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGG +
Preference number: 1 (lower is better)
Translates to: WRGAGPGRRPSEQRC*PCGTRARLAPWTGW
Trigger: CCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGCACCTCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
3UTR CCA 90 bp TTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTaGCTCGGCCTTGGCAGGAGGCGTGGGGGCAGTGAGCACAGGGAC +
Preference number: 1 (lower is better)
Translates to: LGWRVGRGNAGGAGV*LGLGRRRGGSEHRD
Trigger: GTCCCTGTGCTCACTGCCCCCACGCCTCCTGCCAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 90 bp CGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGGGCTaGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTC +
Preference number: 1 (lower is better)
Translates to: RAAAQRGQSEERHLG*RVGRGNAGGAGVWL
Trigger: GAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 90 bp CTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTaGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGT +
Preference number: 1 (lower is better)
Translates to: LLGQPLSEARVKSGI*AGESVEEMQVERVC
Trigger: ACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 90 bp AGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTaGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGG +
Preference number: 1 (lower is better)
Translates to: RVLIKRAATGRRRRD*KMQPQQGTRWPPAW
Trigger: CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
3UTR-3UTR CCA 90 bp CCGGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGAGGTGGAGCGGGTGTGTaGCTCGGCCTTGGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PGARRQATVHLQGSVQRRGGAGV*LGLGRR
Trigger: CCTCCTGCCAAGGCCGAGCCACACACCCGCTCCACC...TCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR GCA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCAGCCGCCAGGCCACGGTaGATCTGCAAGGGAGCGTCC +
Preference number: 2 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPAARPR*ICKGAS
Trigger: GGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGC...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CCA 90 bp GGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTAGGAGACCCGCACGGTaGCACCTTTGGGGGACACCA +
Preference number: 2 (lower is better)
Translates to: GGSPPGHGASARERPEKTRRPAR*HLWGTP
Trigger: TGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCT...AGTCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CAA 90 bp CCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTaGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTG +
Preference number: 2 (lower is better)
Translates to: PPRAAAQRGQSEERH*GWRVGRGNAGGAGV
Trigger: CACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CCA 90 bp AGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGAGGAGACCCGCACGGTaGCACCTTTGGGGGACACCA +
Preference number: 2 (lower is better)
Translates to: RAPPRAAAQRGQSEERHLRRPAR*HLWGTP
Trigger: TGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCT...CAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTGAGCGGCATTTGGGCTaGCGAGTCGGTAGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: DCKACGGRRPRAPPRAAAERHLG*RVGRGN
Trigger: ATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTC...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR GCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTACCGAGTGAGCAGCGGTaGTGGCCGTGTGGGACCCGG +
Preference number: 2 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVPSEQR*WPCGTR
Trigger: CCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGG...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
3UTR-3UTR CCA 90 bp GCCAGAGTGAAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGCACGGTGGCACCTTTaGGGGACACCACGGACCCCG +
Preference number: 2 (lower is better)
Translates to: ARVKSGIWAGESVEEMQVARWHL*GTPRTP
Trigger: CGGGGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGC...CACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGGGTGGAGCGGGTGTGTaGCTCGGCCTTGGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: APWRLATVGSGEWSWGRWGGAGV*LGLGRR
Trigger: CCTCCTGCCAAGGCCGAGCCACACACCCGCTCCACC...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCGAGCGGCATTTGGGCTaGCGAGTCGGTAGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGERHLG*RVGRGN
Trigger: ATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTC...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCACAGGGACAGGAAGCTaGCAGGGAGCTAGGAGACCC +
Preference number: 2 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVTGTGS*QGARRP
Trigger: GGGTCTCCTAGCTCCCTGCCAGCTTCCTGTCCCTGT...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAATGTGTGGCTCGGCCTTaGCAGGAGGCGTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: DQGSYKESGHRKTEERLECVARP*QEAWGQ
Trigger: CTGCCCCCACGCCTCCTGCCAAGGCCGAGCCACACA...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR TCA 90 bp ACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCCGGCCGGGTCCTGCGTaGGCTCCGTGGCGTTTAGCA +
Preference number: 2 (lower is better)
Translates to: TMSLCTSLKVSMNSSIQSRPGPA*APWRLA
Trigger: TGCTAAACGCCACGGAGCTCACGCAGGACCCGGCCG...GGACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR TCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTATCTCTGGCCTCCACTaGGAGCCAGCCTGTCGGGGG +
Preference number: 2 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSISGLH*EPACRG
Trigger: CCCCCGACAGGCTGGCTCTCAGTGGAGGCCAGAGAT...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
3UTR-3UTR GCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTGAAGAGGCTGGGAGCTaGCCCAGAGCCCCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSEEAGS*PRAPGR
Trigger: CCTTCCAGGGGCTCTGGGGCAGCTCCCAGCCTCTTC...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
3UTR-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGCACGGTGGCACCTTTaGGGGACACCACGGACCCCG +
Preference number: 2 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRARWHL*GTPRTP
Trigger: CGGGGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGC...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CCA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGTGTGTGGCTCGGCCTTaGCAGGAGGCGTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: VILDLGWALNSMTRVLIKCVARP*QEAWGQ
Trigger: CTGCCCCCACGCCTCCTGCCAAGGCCGAGCCACACA...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTGCGTTTAGCAACTGTTaGATCAGGGGAATGGTCCTG +
Preference number: 2 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSAFSNC*IRGMVL
Trigger: CAGGACCATTCCCCTGATCCAACAGTTGCTAAACGC...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 72 bp TGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTaGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGC +
Preference number: 3 (lower is better)
Translates to: CGTRARLAPWTG*AHDPRLRGPGG
Trigger: GCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
3UTR TCA 72 bp GAGCTGGAGAGGTGCAGGCCCAGGGCGTCGTCCGAGTaGGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCG +
Preference number: 3 (lower is better)
Translates to: ELERCRPRASSE*AAVLAVWDPGP
Trigger: CGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGCACCTCTCCAGCTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
3UTR GCA 72 bp GGTGCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTaGTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCA +
Preference number: 3 (lower is better)
Translates to: GAGPGRRPSEQR*WPCGTRARLAP
Trigger: TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGCACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
3UTR CCA 72 bp TGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATaGACGGGGTGGGCTCACGACCCTCGACTGCGGGGC +
Preference number: 3 (lower is better)
Translates to: CWPCGTRARLAP*TGWAHDPRLRG
Trigger: GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
3UTR CCA 72 bp GCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTaGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGG +
Preference number: 3 (lower is better)
Translates to: AGPGRRPSEQRC*PCGTRARLAPW
Trigger: CCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
3UTR-3UTR CAA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCGCACGGTGGCACCTTaGGGGGACACCACGGACCCC +
Preference number: 3 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQRTVAP*GDTTDP
Trigger: GGGGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCG...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CAA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGGTGTGTGGCTCGGCCTaGGCAGGAGGCGTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQVCGSA*AGGVGA
Trigger: TGCCCCCACGCCTCCTGCCAAGGCCGAGCCACACAC...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CAA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGTGTGTGGCTCGGCCTaGGCAGGAGGCGTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHVCGSA*AGGVGA
Trigger: TGCCCCCACGCCTCCTGCCAAGGCCGAGCCACACAC...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR TCA 72 bp CGGCCACCAGCTGGGAGTAGGCGGCCGGGTCCTGCGTaGGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGG +
Preference number: 3 (lower is better)
Translates to: RPPAGSRRPGPA*APWRLATVGSG
Trigger: CCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCCGGCCGCCTACTCCCAGCTGGTGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 72 bp AGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTaGCCACCAGCATGGGAAGAGGCTGGGAGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: RDWKMQPQQGTR*PPAWEEAGSCP
Trigger: GGGGCAGCTCCCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
3UTR CCA 72 bp ACAGGAAGCTGGCAGGGAGCTAGGAGACCCGCACGGTaGCACCTTTGGGGGACACCACGGACCCCGAGAAAA +
Preference number: 3 (lower is better)
Translates to: TGSWQGARRPAR*HLWGTPRTPRK
Trigger: TTTTCTCGGGGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCAGCTTCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 72 bp GCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGGGCTaGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGT +
Preference number: 3 (lower is better)
Translates to: AQRGQSEERHLG*RVGRGNAGGAG
Trigger: ACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 72 bp CAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTaGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: QPLSEARVKSGI*AGESVEEMQVE
Trigger: CTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 72 bp TGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTaGGGAAGGTGGCGTCCGGCCCCTCTTCCGTGCGGA +
Preference number: 3 (lower is better)
Translates to: WRLATVGSGEWS*GRWRPAPLPCG
Trigger: TCCGCACGGAAGAGGGGCCGGACGCCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 72 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTaGATCAGGGGAATGGTCCTGGGGAAGGTGGCGTCC +
Preference number: 3 (lower is better)
Translates to: GSCVSSVAFSNC*IRGMVLGKVAS
Trigger: GGACGCCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CAA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAAGTGAAGAGCGGCATTaGGGCTGGCGAGTCGGTAGA +
Preference number: 3 (lower is better)
Translates to: SARERPEKTVRPAVGVGLSEERH*GWRVGR
Trigger: TCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACT...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR GCA 72 bp GCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTaGACCAGCTTAAAGGTGTCAATGAACAGCTCCATC +
Preference number: 3 (lower is better)
Translates to: ASAVSGSPTMSL*TSLKVSMNSSI
Trigger: GATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR-3UTR CAA 90 bp CACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCGCACGGTGGCACCTTaGGGGGACACCACGGACCCC +
Preference number: 3 (lower is better)
Translates to: HDVPVHQLKGVNEQLHPVRTVAP*GDTTDP
Trigger: GGGGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCG...GACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR GCA 72 bp AGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCTaGCGCTCTACCCCGGTGGCGAACTTGGCCCGCTCG +
Preference number: 3 (lower is better)
Translates to: SLKVSMNSSIQS*RSTPVANLARS
Trigger: CGAGCGGGCCAAGTTCGCCACCGGGGTAGAGCGGCAGGACTGGATGGAGCTGTTCATTGACACCTTTAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
3UTR CCA 72 bp ATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTaGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: IKRAATGRRRRD*KMQPQQGTRWP
Trigger: TGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCTGGGCTGCCCTTGGTaGCGGGGTCTCCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRALGCPW*RGLPCA
Trigger: GGCGCAGGGGAGACCCCGGCACCAAGGGCAGCCCAG...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCGCTCGTGCGGCGTGCTaGCGATGTCCCGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGARAAC*RCPAGP
Trigger: AGGGCCTGCGGGACATCGCCAGCACGCCGCACGAGC...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCAGCCTGCGGAGGGCCTaGGGAGACCTGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGRRPSEQRCWPCGTRARSLRRA*GDLGLG
Trigger: GCCCAGCCCCAGGTCTCCCCAGGCCCTCCGCAGGCT...GCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCTCGGCCTGCAGCTTaGTGCCCCCGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGPGRRPSEQRCWPCGTRARPAA*CPRRGC
Trigger: GCAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGC...CCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp CCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCGGGGCCTGGCTGTCCTaGGTCTCCACGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGRRPSEQRCWPCGTRARGAWLS*VSTGSC
Trigger: GCAGGACCCCGTGGAGACTCAGGACAGCCAGGCCCC...GCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGCGGGCCCGCTCGGCCTaGAGCTTGATGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: AGPGRRPSEQRCWPCGTRRARSA*SLMPPQ
Trigger: CTGCGGGGGCATCAAGCTGCAGGCCGAGCGGGCCCG...CCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCAGCGGGAAGGCCACCTaGTGCTCGCCGGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRASGKAT*CSPGPP
Trigger: TGGTGGCCCCGGCGAGCAGCAGGTGGCCTTCCCGCT...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCGGGCTGCCGGTGACGTaGCCGTCGGTGATGACCACG +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGGLPVT*PSVMTT
Trigger: CGTGGTCATCACCGACGGCCACGTCACCGGCAGCCC...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCAGTGAGCAGCGGTGCTaGCCGTGTGGGACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRASEQRC*PCGTRA
Trigger: GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCGCTACGGGGACCCCGTaGGAGGAGCTGGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGATGTP*EELERC
Trigger: GCACCTCTCCAGCTCCTCCCACGGGGTCCCCGTAGC...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCGGCGAAGAGCCGGATaGCCTCCTCGCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWARRRAG*PPRGPA
Trigger: AGCGGGCCCGCGAGGAGGGCATCCGGCTCTTCGCCG...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCAGAGCTCGTGCGGCGTaGTGGCGATGTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRARARAA*WRCPAG
Trigger: GCCTGCGGGACATCGCCAGCACGCCGCACGAGCTCT...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCGGCCAGGGGCCCCCTTaGGACCGTCGGCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGGQGPP*DRRLQI
Trigger: AATTTGGAGCCGACGGTCGCAAGGGGGCCCCTGGCC...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCGAGGAGCTGGAGAGGTaGAGGCCCAGGGCGTCGTCC +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRAEELER*RPRASS
Trigger: GGACGACGCCCTGGGCCTGCACCTCTCCAGCTCCTC...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCCGGTCGCTGCCCGGTaGGCTGAACACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRAPVAAR*AEHLHL
Trigger: CAGGTGGAGGTGTTCAGCCCACCGGGCAGCGACCGG...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCTCCTGGGACTCCTCTTaGCCCCCGAGGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRASWDSS*PPRAWL
Trigger: GAGCCAGGCCCTCGGGGGCCAAGAGGAGTCCCAGGA...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCTCACCCTCGGGTCCTaGGACTCCTCTTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRALTLGS*DSSWPP
Trigger: CGGGGGCCAAGAGGAGTCCCAGGACCCGAGGGTGAG...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGGCGGTGCTGGCCGTGTaGGACCCGGGCCCGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PGPLSTMDGVGSRPSTAGAVLAV*DPGPLS
Trigger: GCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGC...CCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACCAGCGCGCAGTCGGTaGAGGTGCCGCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSPARSR*RCRGGR
Trigger: CCTTCCGCCGCGGCACCTTCACCGACTGCGCGCTGG...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGAGGGCGTCGTCCGAGTaGGCAGCGGTGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: EQRCWPCGTRARLAPWTGRASSE*AAVLAV
Trigger: CACGGCCAGCACCGCTGCTCACTCGGACGACGCCCT...CCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCGGACGGTGCCCTTGCTaGGGTCCTGCCGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: PGRRPSEQRCWPCGTRARGRCPC*GPAGSA
Trigger: AGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCC...GCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCATGTCCACGGGCCGCTaGGTGCACTGTGCCACGGAC +
Preference number: 4 (lower is better)
Translates to: PGRRPSEQRCWPCGTRARMSTGR*VHCATD
Trigger: GTCCGTGGCACAGTGCACGCAGCGGCCCGTGGACAT...GCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCCATGTCCACGTCGCTaGCCAAGGCCAGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRAPCPRR*PRPARW
Trigger: CCACCGTGCTGGCCTTGGGCAGCGACGTGGACATGG...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCGAGTGAGCAGCGGTaGTGGCCGTGTGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: PGPLSTMDGVGSRPSTAGPSEQR*WPCGTR
Trigger: CCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGG...CCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCCCTGGTCGATCTCGGTaGAGTCGGGCAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGPGRSR*SRAAWW
Trigger: CCACCATGCTGCCCGACTCCACCGAGATCGACCAGG...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCAGGGCCCTCTGCGTCCTaGGCGGCCAGGGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSGPSAS*AARVPL
Trigger: AAGGGGGACCCTGGCCGCCCAGGACGCAGAGGGCCC...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCTGCCTGGGCTGCCCTTaGTGCCGGGGTCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RARLAPWTGWAHDPRLRGCLGCP*CRGLPC
Trigger: GCAGGGGAGACCCCGGCACCAAGGGCAGCCCAGGCA...GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCAGGGGCCATCGCTGCCTaGGCTGCCCTTGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPGAIAA*AALGAG
Trigger: CCCGGCACCAAGGGCAGCCCAGGCAGCGATGGCCCC...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCATGGCCCCCGAGGGCCTaGCTCACCAGGGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: RRPSEQRCWPCGTRARLAWPPRA*LTRGTR
Trigger: CCTGGTCCCCCTGGTGAGCCAGGCCCTCGGGGGCCA...TGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCATGGCCGTGAGGTTGTaGCTCAGCGGGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGMAVRL*LSGKAT
Trigger: GGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCAT...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCGCCCGCTTAGCACCATaGACGGGGTGGGCTCACGAC +
Preference number: 4 (lower is better)
Translates to: PGRRPSEQRCWPCGTRARARLAP*TGWAHD
Trigger: GTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGC...GCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGCTGCCCGGTGGGCTaGACACCTCCACCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGRCPVG*TPPPGQ
Trigger: CTGACCAGGTGGAGGTGTTCAGCCCACCGGGCAGCG...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCAGCAGATCCAGCGGATaGAGCGGTCGAAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGSRSSG*SGRRSR
Trigger: CCGGCTTCTTCGACCGCTTCATCCGCTGGATCTGCT...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GGCCTAGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCCGGCGAAGAGCCGGATaGCCTCCTCGCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GLELLLGQPLSEARVKSGRRRAG*PPRGPA
Trigger: AGCGGGCCCGCGAGGAGGGCATCCGGCTCTTCGCCG...GCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCTAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp CGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCATCGGTCCCGTTCTTaGCAGCCAGGCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RARLAPWTGWAHDPRLRGHRSRS*QPGQGP
Trigger: GGGCCCCTGGCCTGGCTGGCAAGAACGGGACCGATG...GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTGGCGTGCACCACGCCTaGGCCCACGTGCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWAGVHHA*AHVREG
Trigger: TCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCC...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGTGGCCCTGAAGTCCTaGTCCCGAGGAGGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: AGPGRRPSEQRCWPCGTRVALKS*SRGGSA
Trigger: AGCGGAGCCTCCTCGGGACCAGGACTTCAGGGCCAC...CCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCCCCTTCTCCCCCTTaGGGCCATCGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRPSEQRCWPCGTRARLAPPSPP*GHRCLG
Trigger: GCCCAGGCAGCGATGGCCCCAAGGGGGAGAAGGGGG...TGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGCTCCCTGGGGGCCTCTaGGTCCAGGCAAGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: EQRCWPCGTRARLAPWTGLPGGL*VQASLG
Trigger: ACCGAGGCTTGCCTGGACCCAGAGGCCCCCAGGGAG...CCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCATCCCTCGGGGCCGCGTaGGCCGGGCTCGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSSLGAA*AGLAFF
Trigger: GAAAAAGGCGAGCCCGGCCCACGCGGCCCCGAGGGA...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTTCGTCCCGAGGGTCGTaGCGCCCGTCCGTGATGACC +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWASSRGS*RPSVMT
Trigger: GGTCATCACGGACGGGCGCCACGACCCTCGGGACGA...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCTCTCGGAGCTGTCGATaGCGAAGACCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRASRSCR*RRPRPG
Trigger: CCCTGGACGTGGTCTTCGTCATCGACAGCTCCGAGA...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCACGATGGCCGTCACTGTaGCGTCGCGGTCGCACAGCG +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPRWPSL*RRGRTA
Trigger: CGCTGTGCGACCGCGACGTCACAGTGACGGCCATCG...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCATGTCCGTGGGGGACTaGATGGTGACGCTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PGRRPSEQRCWPCGTRARMSVGD*MVTLSE
Trigger: CTCGGAGAGCGTCACCATGCAGTCCCCCACGGACAT...GCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACGGCGAAGTGGACGGTaGCCTTGCTGCGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RRPSEQRCWPCGTRARLARRSGR*PCCGPA
Trigger: GGCAGGACCGCAGCAAGGGCACCGTCCACTTCGCCG...TGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp TGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCACGGACCCGGGCCCGCTCGGCCTaGAGCTTGATGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: WQGARRPARWHLWGTPRTRARSA*SLMPPQ
Trigger: CTGCGGGGGCATCAAGCTGCAGGCCGAGCGGGCCCG...GGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp CCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCCAATGGGGCCTTCGATaGCCGGGTCTCCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PGRRPSEQRCWPCGTRARQWGLR*PGLPVF
Trigger: GAAGACAGGGAGACCCGGGCATCGAAGGCCCCATTG...GCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCTCCCCTGGACTCCCTaGTTCCCCCGGGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWALPWTP*FPRVTV
Trigger: GACGGTTACCCGGGGGAAGCAGGGAGTCCAGGGGAG...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCAGGCCAGGGTCCCCCTTaGCGCCTTGGTCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPGQGPP*RLGLLA
Trigger: AGCGAGGAGACCAAGGCGGCAAGGGGGACCCTGGCC...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCCTGGGCTGCCCTTGGTaGCGGGGTCTCCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGLGCPW*RGLPCA
Trigger: GGCGCAGGGGAGACCCCGGCACCAAGGGCAGCCCAG...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCGCCCGGCTGGGCGGGTaGCCGGGCTTTAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGARLGG*PGFSRG
Trigger: CCCTCTGCTAAAGCCCGGGCACCCGCCCAGCCGGGC...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTCCGGGGCCACCAAACTaGAGCAGCGCCACGCGTGCG +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTPGPPN*SSATRA
Trigger: CGCACGCGTGGCGCTGCTGCAGTTTGGTGGCCCCGG...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTCACGAAGGACAGCTCTaGGTGCCTCCGGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTHEGQL*VPPGPA
Trigger: GGCGGGGCCCGGAGGCACGCAGAGCTGTCCTTCGTG...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCGTGGGTACCACGTTCTaGTTGCGCATGGAGTGCGCC +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRAVGTTF*LRMECA
Trigger: GGCGCACTCCATGCGCAAGCAGAACGTGGTACCCAC...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGGCTGCTGGGCCTGGATaGCCCCCAGGATTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PGPLSTMDGVGSRPSTAGAAGPG*PPGFPR
Trigger: TCTGGGGAATCCTGGGGGCCATCCAGGCCCAGCAGC...CCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGCCGGGGTCTCCCTTaGGGCCTGGCTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: EQRCWPCGTRARLAPWTGCRGLP*GLAVLS
Trigger: ACTCAGGACAGCCAGGCCCCAAGGGAGACCCCGGCA...CCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGTCCCTCGGGGCCGCGTaGGCCGGGCTCGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQSLGAA*AGLAFF
Trigger: GAAAAAGGCGAGCCCGGCCCACGCGGCCCCGAGGGA...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCACGGACCTGGCCCCCGAGGGCCTaGCTCACCAGGGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: WQGARRPARWHLWGTPRTWPPRA*LTRGTR
Trigger: CCTGGTCCCCCTGGTGAGCCAGGCCCTCGGGGGCCA...GGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCGTTGCGCACCTGCTGTaGCTTGTCGCAGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRAVAHLL*LVAGDG
Trigger: TCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAAC...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCGCTCCACTGTTGCCTTaGTACCCCTTGCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGAPLLP*YPLLPL
Trigger: CAAGGGAAGCAAGGGGTATCAAGGCAACAGTGGAGC...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGGTCCTGGGTAGCTaGATCCAGGCCTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTGVLGS*IQACRG
Trigger: ACCCCGGCAGGCCTGGATTCAGCTACCCAGGACCCC...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGGGGGTCCTGGGTAGCTaGATCCAGGCCTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQGVLGS*IQACRG
Trigger: ACCCCGGCAGGCCTGGATTCAGCTACCCAGGACCCC...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTACAGCGCCCGCAAGTTaGGGTCATCGTCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWATAPAS*GHRPEG
Trigger: ACCCTCGGGACGATGACCTCAACTTGCGGGCGCTGT...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGTCCTGCCGGATCTaGTCCGTCATGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGRSCRI*SVMLAS
Trigger: GCTGGCCAACATGACGGAGCAGATCCGGCAGGACCG...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGCCCTTGCTGCGGTCCTaGCGGATCTGCTCCGTCATG +
Preference number: 4 (lower is better)
Translates to: EQRCWPCGTRARLAPWTGPLLRS*RICSVM
Trigger: CATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGG...CCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTCATCGGTCCCGTTCTTaGCAGCCAGGCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAAHRSRS*QPGQGP
Trigger: GGGCCCCTGGCCTGGCTGGCAAGAACGGGACCGATG...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGGGCCAGGGTCCCCCTTaGCGCCTTGGTCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQGQGPP*RLGLLA
Trigger: AGCGAGGAGACCAAGGCGGCAAGGGGGACCCTGGCC...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCACCCTCGTGGCTGTACTaGACCACGCCCACACGCGTC +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPPSWLY*TTPTRV
Trigger: GACGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGG...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGCCACGGGCCGCTGCGTaGACTGTGCCACGGACAGCT +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTPRAAA*TVPRTA
Trigger: AGCTGTCCGTGGCACAGTGCACGCAGCGGCCCGTGG...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCACAGCAGCGCCACGCGTaGGTTGAGAGGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPQQRHA*VERVVV
Trigger: GACGACGACCCTCTCAACGCACGCGTGGCGCTGCTG...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGGAGTGCGCCGACTCGTaGAGACTGTCGTTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: EQRCWPCGTRARLAPWTGECADS*RLSLPV
Trigger: CACGGGCAACGACAGTCTGCACGAGTCGGCGCACTC...CCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCGTACCACGTTCTGCTTaGGCATGGAGTGCGCCGACT +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRAVPRSA*AWSAPT
Trigger: AGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTAC...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCAATGACCTCCTGCTGCTaGGCCTGGATGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPMTSCC*AWMAPR
Trigger: CCTGGGGGCCATCCAGGCCCAGCAGCAGGAGGTCAT...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCCGGTCGCTGCCCGGTaGGCTGAACACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQPVAAR*AEHLHL
Trigger: CAGGTGGAGGTGTTCAGCCCACCGGGCAGCGACCGG...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTATGACCACGGCGAAGTaGACGGTGCCCTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWAMTTAK*TVPLLR
Trigger: CCGCAGCAAGGGCACCGTCCACTTCGCCGTGGTCAT...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCTTCAGGTTCTGGTTaGGGGCCACGGCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PGPLSTMDGVGSRPSTAGPSGSG*GPRRRA
Trigger: GGCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGG...CCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCAGCCCAGGCCCGCCCTTaGCTCCTTTCACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPAQARP*LLSHQD
Trigger: GTCCTGGTGTGAAAGGAGCCAAGGGCGGGCCTGGGC...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CCGGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTCCCTGGGGGCCTCTaGGTCCAGGCAAGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: PGARRQATVHLQGSVQRRLPGGL*VQASLG
Trigger: ACCGAGGCTTGCCTGGACCCAGAGGCCCCCAGGGAG...TCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGTGCTCCTCGGGGTCCTaGGTAGCTGAATCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AGPGRRPSEQRCWPCGTRCSSGS*VAESRP
Trigger: AGGCCTGGATTCAGCTACCCAGGACCCCGAGGAGCA...CCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCAGCACCATGGACGGGGTaGGCTCACGACCCTCGACTG +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSAPWTG*AHDPRL
Trigger: CAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGGTAGGTCAGGAGCCTTaGGATGGCTGCAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: EQRCWPCGTRARLAPWTGVGQEP*DGCRGR
Trigger: CCTCCCCCTGCAGCCATCCCAAGGCTCCTGACCTAC...CCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTCAGCACCTGTGGCCCTaGAGTCCTGGTCCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTQHLWP*SPGPEE
Trigger: CTCCTCGGGACCAGGACTTCAGGGCCACAGGTGCTG...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGGGGACTGCATGGTaGCGCTCTCCGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPWGTAW*RSPRCP
Trigger: TGGACACCTCGGAGAGCGTCACCATGCAGTCCCCCA...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGCAAACTTGAGGGCTaGGGGTGTCCAGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTGKLEG*GCPGAA
Trigger: GGCGGCACCTGGACACCCTCAGCCCTCAAGTTTGCC...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTCCGTGCGGAGGAAGGTaGCCGGGGGCTCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAPCGGR*PGARRQ
Trigger: CTGGCGGCGAGCCCCCGGTCACCTTCCTCCGCACGG...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCCGGCCGGGTCCTGCGTaGGCTCCGTGGCGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGRPGPA*APWRLA
Trigger: TGCTAAACGCCACGGAGCTCACGCAGGACCCGGCCG...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGCCTCGTGGATGGCCGTaGGGTTGTGGCTCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTPRGWP*GCGSAG
Trigger: TCCCGCTGAGCCACAACCTCACGGCCATCCACGAGG...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCATGCGCACGATGGCATTaGTGGCGTGCACCACGCCTG +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSCARWH*WRAPRL
Trigger: CAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCA...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCAGGAGCACGGAGCAGGTaGCCTGGAGCATCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRPSEQRCWPCGTRARLAGARSR*PGASWQ
Trigger: CTGCCAAGATGCTCCAGGGCACCTGCTCCGTGCTCC...TGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGGCGAGATGACCTCCTaGTGCTGGGCCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTGEMTS*CWAWMA
Trigger: GGCCATCCAGGCCCAGCAGCAGGAGGTCATCTCGCC...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCAACTGCGGCACGAACTaGTTCATGTGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGNCGTN*FMWKSR
Trigger: CCTGCTCTTCCACATGAAGCAGTTCGTGCCGCAGTT...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCCGGCGAAGTGGACGGTaGCCTTGCTGCGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGRRSGR*PCCGPA
Trigger: GGCAGGACCGCAGCAAGGGCACCGTCCACTTCGCCG...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCGGGCCCGCTCGGCCTaGAGCTTGATGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: ERPEKTVRPAVGVGLELLRARSA*SLMPPQ
Trigger: CTGCGGGGGCATCAAGCTGCAGGCCGAGCGGGCCCG...GAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCAGAGCTCGTGCGGCGTaGTGGCGATGTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGRARAA*WRCPAG
Trigger: GCCTGCGGGACATCGCCAGCACGCCGCACGAGCTCT...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGTGGCGTAGTCGTTaGGGTAGAGCTCGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPWWRSR*GRARAA
Trigger: CGCCGCACGAGCTCTACCGCAACGACTACGCCACCA...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCAGAACAGCGTCATGTTaGGCACCTGCTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGRTASC*APAVAC
Trigger: ACAAGCCACAGCAGGTGCGCAACATGACGCTGTTCT...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCTGCTTGCGCATGGAGTaGGCCGACTCGTGCAGACTG +
Preference number: 4 (lower is better)
Translates to: RARLAPWTGWAHDPRLRGCLRME*ADSCRL
Trigger: CAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCA...GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTTGCTCCTTCAGGTTCTaGTTGGGGGCCACGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWACSFRF*LGATAK
Trigger: CTTCGCCGTGGCCCCCAACCAGAACCTGAAGGAGCA...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACCCTGTCTTCCCTTCTaGCCAGGCTCTCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSPCLPF*PGSPGS
Trigger: TGAGCCGGGAGAGCCTGGCCAGAAGGGAAGACAGGG...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGTCCCCCTTGCCGCCTTaGTCTCCTCGCTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTSPLPP*SPRSPG
Trigger: TCCAGGGGAGCGAGGAGACCAAGGCGGCAAGGGGGA...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCAACCCCTTGCTTCCCTTaGCCCCGATTTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSTPCFP*PRFLPG
Trigger: CCCCGGGAGAAATCGGGGCCAAGGGAAGCAAGGGGT...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTTGCCGGGGTCTCCCTTaGGGCCTGGCTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAACRGLP*GLAVLS
Trigger: ACTCAGGACAGCCAGGCCCCAAGGGAGACCCCGGCA...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCTCGTCCCGAGGGTCGTaGCGCCCGTCCGTGATGACC +
Preference number: 4 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGSSRGS*RPSVMT
Trigger: GGTCATCACGGACGGGCGCCACGACCCTCGGGACGA...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CAGGAAGCTGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACGCCGCTCTACCCCGGTaGCGAACTTGGCCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: QEAGRELGDPHGGTFGGHAALPR*RTWPAR
Trigger: CCGAGCGGGCCAAGTTCGCCACCGGGGTAGAGCGGC...GTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCAGCTTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCAGCCGCTCTACCCCGGTaGCGAACTTGGCCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPAALPR*RTWPAR
Trigger: CCGAGCGGGCCAAGTTCGCCACCGGGGTAGAGCGGC...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCAAGCGCCGGGCCTTGTaGAAGTTCTGCTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: RARLAPWTGWAHDPRLRGKRRAL*KFCSPS
Trigger: GCTGGGTGAGCAGAACTTCCACAAGGCCCGGCGCTT...GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCAGTCTCCAGCGCCTCGTaGATGGCCGTGAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPVSSAS*MAVRLW
Trigger: CCACAACCTCACGGCCATCCACGAGGCGCTGGAGAC...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGTTCTGCTTGCGCATaGAGTGCGCCGACTCGTGCA +
Preference number: 4 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGRSACA*SAPTRA
Trigger: TGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACG...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCCAAGGCCAGCACGGTaGGTACCACGTTCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWAPRPAR*VPRSAC
Trigger: GCAAGCAGAACGTGGTACCCACCGTGCTGGCCTTGG...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCCAGCGCGCAGTCGGTaGAGGTGCCGCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHPARSR*RCRGGR
Trigger: CCTTCCGCCGCGGCACCTTCACCGACTGCGCGCTGG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGCCAGCGCGCAGTCGGTaGAGGTGCCGCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQPARSR*RCRGGR
Trigger: CCTTCCGCCGCGGCACCTTCACCGACTGCGCGCTGG...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTCCAGCGCGCAGTCGGTaGAGGTGCCGCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAPARSR*RCRGGR
Trigger: CCTTCCGCCGCGGCACCTTCACCGACTGCGCGCTGG...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGCTCGGCCTGCAGCTTaGTGCCCCCGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMARPAA*CPRRGC
Trigger: GCAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGC...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp CGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCACCCTTCTCTCCTTTaGAGCCAGGAACGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RARLAPWTGWAHDPRLRGHPSLL*SQERPW
Trigger: CCAAGGGCGTTCCTGGCTTCAAAGGAGAGAAGGGTG...GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTAGTGGACGGTGCCCTTaGTGCGGTCCTGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTSGRCP*CGPAGS
Trigger: AGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACT...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGCGGGCCCGCTCGGCCTaGAGCTTGATGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQRARSA*SLMPPQ
Trigger: CTGCGGGGGCATCAAGCTGCAGGCCGAGCGGGCCCG...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCGGCGAAGAGCCGGATaGCCTCCTCGCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHRRRAG*PPRGPA
Trigger: AGCGGGCCCGCGAGGAGGGCATCCGGCTCTTCGCCG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp CGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCGGCTCACCCATGTTaGCCTTGGCACCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RRPSEQRCWPCGTRARLAPAHPC*PWHPSV
Trigger: GACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCGG...TGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp TGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCACGGACCGGCCAGGGGCCCCCTTaGGACCGTCGGCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: WQGARRPARWHLWGTPRTGQGPP*DRRLQI
Trigger: AATTTGGAGCCGACGGTCGCAAGGGGGCCCCTGGCC...GGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTAGCCAGGAGGTCCGATaGGCCCCAGCTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTSQEVR*APACPS
Trigger: AGAAGGGCAAGCTGGGGCGCATCGGACCTCCTGGCT...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGCTGGGCTGCCCTTGGTaGCGGGGTCTCCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQLGCPW*RGLPCA
Trigger: GGCGCAGGGGAGACCCCGGCACCAAGGGCAGCCCAG...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTCTGGGCTGCCCTTGGTaGCGGGGTCTCCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEALGCPW*RGLPCA
Trigger: GGCGCAGGGGAGACCCCGGCACCAAGGGCAGCCCAG...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp CCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCTTGGCTCCTTTGTTaGCAACCTCTCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGPLSTMDGVGSRPSTAGPWLLC*QPLQPG
Trigger: GCCTGGCTGGAGAGGTTGGCAACAAAGGAGCCAAGG...CCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCGGATGGCCTCAAAGGTaGCCTCGTGGCTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: RARLAPWTGWAHDPRLRGGWPQR*PRGCTA
Trigger: TGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCC...GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp CAGGAAGCTGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACGCCGCCAGGCCACGGTaGATCTGCAAGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: QEAGRELGDPHGGTFGGHAARPR*ICKGAS
Trigger: GGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGC...GTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCAGCTTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCACGGACCGAAGAGGCTGGGAGCTaGCCCAGAGCCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: WQGARRPARWHLWGTPRTEEAGS*PRAPGR
Trigger: CCTTCCAGGGGCTCTGGGGCAGCTCCCAGCCTCTTC...GGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCACCGCTGCGTGCACTGTaGCACGGACAGCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPPLRAL*HGQLCL
Trigger: CAAACAGAGCTGTCCGTGGCACAGTGCACGCAGCGG...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGACGCCTGCGCCCACGTaGGAGAAGGAGTTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: EQRCWPCGTRARLAPWTGTPAPT*EKEFRY
Trigger: ATACCTGAACTCCTTCTCGCACGTGGGCGCAGGCGT...CCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGATGGCATTGATGGCGTaGACCACGCCTGCGCCCACG +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTMALMA*TTPAPT
Trigger: CGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCAT...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCGCAGTCGGTCTTCTCTaGGCAGTTGTTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGAVGLL*AVVVSL
Trigger: GAGAGAAACAACAACTGCCCAGAGAAGACCGACTGC...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGAGTCGGGCAGCATGGTaGCGTAGTCGTTGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGSRAAW*RSRCGR
Trigger: TCTACCGCAACGACTACGCCACCATGCTGCCCGACT...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTCCCTGTCTTCCCTTCTaGCCAGGCTCTCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAAPCLPF*PGSPGS
Trigger: TGAGCCGGGAGAGCCTGGCCAGAAGGGAAGACAGGG...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCAACGCCCTTGGGTCCTaGGAATCCAATGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RARLAPWTGWAHDPRLRGNALGS*ESNGAF
Trigger: GAAGGCCCCATTGGATTCCCAGGACCCAAGGGCGTT...GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCTCCCCCTTGCCGCCTTaGTCTCCTCGCTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGSPLPP*SPRSPG
Trigger: TCCAGGGGAGCGAGGAGACCAAGGCGGCAAGGGGGA...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTTCCCCCTTGCCGCCTTaGTCTCCTCGCTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GGSPPGHGASARERPEKTSPLPP*SPRSPG
Trigger: TCCAGGGGAGCGAGGAGACCAAGGCGGCAAGGGGGA...AGTCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGCCCTCTGCGTCCTaGGCGGCCAGGGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHGPSAS*AARVPL
Trigger: AAGGGGGACCCTGGCCGCCCAGGACGCAGAGGGCCC...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGCCTAGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCACCCCTTGCTTCCCTTaGCCCCGATTTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GLELLLGQPLSEARVKSGTPCFP*PRFLPG
Trigger: CCCCGGGAGAAATCGGGGCCAAGGGAAGCAAGGGGT...GCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCTAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGGGGGCCATCGCTGCCTaGGCTGCCCTTGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKGAIAA*AALGAG
Trigger: CCCGGCACCAAGGGCAGCCCAGGCAGCGATGGCCCC...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGGGCCATCGCTGCCTaGGCTGCCCTTGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAGAIAA*AALGAG
Trigger: CCCGGCACCAAGGGCAGCCCAGGCAGCGATGGCCCC...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCCCCCTTCTCCCCCTTaGGGCCATCGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ERPEKTVRPAVGVGLELLPPSPP*GHRCLG
Trigger: GCCCAGGCAGCGATGGCCCCAAGGGGGAGAAGGGGG...GAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGTCCCTCGGGGCCGCGTaGGCCGGGCTCGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RAPPRAAAQRGQSEERHLSLGAA*AGLAFF
Trigger: GAAAAAGGCGAGCCCGGCCCACGCGGCCCCGAGGGA...CAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CAGGAAGCTGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACTCCTGGGACTCCTCTTaGCCCCCGAGGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QEAGRELGDPHGGTFGGHSWDSS*PPRAWL
Trigger: GAGCCAGGCCCTCGGGGGCCAAGAGGAGTCCCAGGA...GTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCAGCTTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCACTCACCCTCGGGTCCTaGGACTCCTCTTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPLTLGS*DSSWPP
Trigger: CGGGGGCCAAGAGGAGTCCCAGGACCCGAGGGTGAG...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGTTCGTCGTCCAGCTaGATGGCCTCAAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSRSSSS*MASKVP
Trigger: GGGCACCTTTGAGGCCATCCAGCTGGACGACGAACG...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCTCTCGTGCTTCTCGTaGAACATGTCCCCGATGCCG +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWALSCFS*NMSPMP
Trigger: CGGCATCGGGGACATGTTCCACGAGAAGCACGAGAG...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTAGGAGACCCGCACGGTaGCACCTTTGGGGGACACCA +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAARRPAR*HLWGTP
Trigger: TGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCT...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGGGGTGGAGCGGGTGTGTaGCTCGGCCTTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ELLLGQPLSEARVKSGIWGGAGV*LGLGRR
Trigger: CCTCCTGCCAAGGCCGAGCCACACACCCGCTCCACC...CCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTTCAGGGGAATGGTCCTaGGGAAGGTGGCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GGSPPGHGASARERPEKTSGEWS*GRWRPA
Trigger: GGCCGGACGCCACCTTCCCCAGGACCATTCCCCTGA...AGTCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGGGGGCCTGGCTGTCCTaGGTCTCCACGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQGAWLS*VSTGSC
Trigger: GCAGGACCCCGTGGAGACTCAGGACAGCCAGGCCCC...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTTCTCGGAGCTGTCGATaGCGAAGACCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAASRSCR*RRPRPG
Trigger: CCCTGGACGTGGTCTTCGTCATCGACAGCTCCGAGA...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGTCGTAGGCAAACTTaGGGGCTGAGGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTGRRQT*GLRVSR
Trigger: CCTGGACACCCTCAGCCCTCAAGTTTGCCTACGACC...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCGATGGCCGTCACTGTaGCGTCGCGGTCGCACAGCG +
Preference number: 4 (lower is better)
Translates to: ERPEKTVRPAVGVGLELLRWPSL*RRGRTA
Trigger: CGCTGTGCGACCGCGACGTCACAGTGACGGCCATCG...GAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTCGGTCCTGCCGGATCTaGTCCGTCATGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGSPPGHGASARERPEKTRSCRI*SVMLAS
Trigger: GCTGGCCAACATGACGGAGCAGATCCGGCAGGACCG...AGTCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCACGGACCCCCTTGCTGCGGTCCTaGCGGATCTGCTCCGTCATG +
Preference number: 4 (lower is better)
Translates to: WQGARRPARWHLWGTPRTPLLRS*RICSVM
Trigger: CATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGG...GGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCCCCTTGCTGCGGTCCTaGCGGATCTGCTCCGTCATG +
Preference number: 4 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGPLLRS*RICSVM
Trigger: CATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGG...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGCGGCGAAGTGGACGGTaGCCTTGCTGCGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWRRSGR*PCCGPA
Trigger: GGCAGGACCGCAGCAAGGGCACCGTCCACTTCGCCG...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp AGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGCGGCGAAGTGGACGGTaGCCTTGCTGCGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RAPPRAAAQRGQSEERHLRRSGR*PCCGPA
Trigger: GGCAGGACCGCAGCAAGGGCACCGTCCACTTCGCCG...CAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCCGGCTCACCCATGTTaGCCTTGGCACCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQPAHPC*PWHPSV
Trigger: GACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCGG...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGCCTTTTTCTCCGGGTaGTCCTCGGGGTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTAFFSG*SSGSWV
Trigger: TACCCAGGACCCCGAGGAGCACCCGGAGAAAAAGGC...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGTCATGTTGCGCACCTaGTGTGGCTTGTCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTVMLRT*CGLSQA
Trigger: CGCCTGCGACAAGCCACAGCAGGTGCGCAACATGAC...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGGTCATGTTGCGCACCTaGTGTGGCTTGTCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQVMLRT*CGLSQA
Trigger: CGCCTGCGACAAGCCACAGCAGGTGCGCAACATGAC...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGGCCGCCAGGCCACGGTaGATCTGCAAGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWAARPR*ICKGAS
Trigger: GGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGC...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATATTGGGTCAGGGCTTaGTCCAGAGCTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPYWVRA*SRAQGP
Trigger: TGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATA...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTACGGAGCAGGTGCCCTaGAGCATCTTGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTTEQVP*SILAAP
Trigger: AGGTGCTGCCAAGATGCTCCAGGGCACCTGCTCCGT...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGGGGCTGCCGGTGACGTaGCCGTCGGTGATGACCACG +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWGLPVT*PSVMTT
Trigger: CGTGGTCATCACCGACGGCCACGTCACCGGCAGCCC...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCCCTGGTCGATCTCGGTaGAGTCGGGCAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGPGRSR*SRAAWW
Trigger: CCACCATGCTGCCCGACTCCACCGAGATCGACCAGG...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACACCCATGTTGCCCTTaGCACCCTTCTGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RRPSEQRCWPCGTRARLAHPCCP*HPSVHG
Trigger: ACCGTGGACAGAAGGGTGCCAAGGGCAACATGGGTG...TGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTCCCCCTTCTCCCCCTTaGGGCCATCGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTPPSPP*GHRCLG
Trigger: GCCCAGGCAGCGATGGCCCCAAGGGGGAGAAGGGGG...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCCCCCTTCTCCCCCTTaGGGCCATCGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHPPSPP*GHRCLG
Trigger: GCCCAGGCAGCGATGGCCCCAAGGGGGAGAAGGGGG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGCTCCCTGGGGGCCTCTaGGTCCAGGCAAGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWLPGGL*VQASLG
Trigger: ACCGAGGCTTGCCTGGACCCAGAGGCCCCCAGGGAG...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGCGTCGTCCAGCTGGATaGCCTCAAAGGTGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTRRPAG*PQRCPR
Trigger: ACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACG...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTCGTTCGTCGTCCAGCTaGATGGCCTCAAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAARSSSS*MASKVP
Trigger: GGGCACCTTTGAGGCCATCCAGCTGGACGACGAACG...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTAACACACGTGTCTTCTaGCGCCGGCTCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWANTRVF*RRLSLM
Trigger: CATCAAGGAGAGCCGGCGCCAGAAGACACGTGTGTT...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCGCTTGTCGCAGGCGATaGAGTAGAGGTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRAACRRR*SRGFHS
Trigger: AGAGTGAAAACCTCTACTCCATCGCCTGCGACAAGC...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGCCTGGGAAGCTAGTGTaGCAGGGAGGGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWPGKLV*QGGPSP
Trigger: CGGGCTGGGCCCTCCCTGCCACACTAGCTTCCCAGG...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGCGCTGCCCGGTGGGCTaGACACCTCCACCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKRCPVG*TPPPGQ
Trigger: CTGACCAGGTGGAGGTGTTCAGCCCACCGGGCAGCG...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCGCTGCCCGGTGGGCTaGACACCTCCACCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHRCPVG*TPPPGQ
Trigger: CTGACCAGGTGGAGGTGTTCAGCCCACCGGGCAGCG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCGCTCGGCCTGCAGCTTaGTGCCCCCGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVARPAA*CPRRGC
Trigger: GCAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGC...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGGGGGCCTGGCTGTCCTaGGTCTCCACGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KSGIWAGESVEEMQVERVGAWLS*VSTGSC
Trigger: GCAGGACCCCGTGGAGACTCAGGACAGCCAGGCCCC...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGGGTCCTGGGTAGCTaGATCCAGGCCTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMGVLGS*IQACRG
Trigger: ACCCCGGCAGGCCTGGATTCAGCTACCCAGGACCCC...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGGGGTCCTGGGTAGCTaGATCCAGGCCTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWGVLGS*IQACRG
Trigger: ACCCCGGCAGGCCTGGATTCAGCTACCCAGGACCCC...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGCGATGGCCGTCACTGTaGCGTCGCGGTCGCACAGCG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKRWPSL*RRGRTA
Trigger: CGCTGTGCGACCGCGACGTCACAGTGACGGCCATCG...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGAAGGAGCTGATGCCCTaGAGGTTCTTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AGPGRRPSEQRCWPCGTRKELMP*RFLMKE
Trigger: CTCCTTCATCAAGAACCTGCAGGGCATCAGCTCCTT...CCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp AGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGGGACGGTGCCCTTGCTaGGGTCCTGCCGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RAPPRAAAQRGQSEERHLGRCPC*GPAGSA
Trigger: AGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCC...CAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGATGTCCCGCAGGCCCTaGTCCTTCAGGTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTMSRRP*SFRFWL
Trigger: CAACCAGAACCTGAAGGAGCAGGGCCTGCGGGACAT...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTATGTCCCGCAGGCCCTaGTCCTTCAGGTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAAMSRRP*SFRFWL
Trigger: CAACCAGAACCTGAAGGAGCAGGGCCTGCGGGACAT...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTCATCGGTCCCGTTCTTaGCAGCCAGGCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTHRSRS*QPGQGP
Trigger: GGGCCCCTGGCCTGGCTGGCAAGAACGGGACCGATG...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGCATCGGTCCCGTTCTTaGCAGCCAGGCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQHRSRS*QPGQGP
Trigger: GGGCCCCTGGCCTGGCTGGCAAGAACGGGACCGATG...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGCTCCCCTGGACTCCCTaGTTCCCCCGGGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: AGESVEEMQVERVCGSALLPWTP*FPRVTV
Trigger: GACGGTTACCCGGGGGAAGCAGGGAGTCCAGGGGAG...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACTGGGGCTCCACTGTTaGCTTGATACCCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSLGLHC*LDTPCF
Trigger: GAAGCAAGGGGTATCAAGGCAACAGTGGAGCCCCAG...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTCCTTGGGGCCATCGCTaGCTGGGCTGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAPWGHR*LGCPWC
Trigger: GCACCAAGGGCAGCCCAGGCAGCGATGGCCCCAAGG...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTCCTTGGGGCCATCGCTaGCTGGGCTGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTPWGHR*LGCPWC
Trigger: GCACCAAGGGCAGCCCAGGCAGCGATGGCCCCAAGG...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCCTTGGGGCCATCGCTaGCTGGGCTGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHPWGHR*LGCPWC
Trigger: GCACCAAGGGCAGCCCAGGCAGCGATGGCCCCAAGG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTGGATGGCCTCAAAGGTaGCCTCGTGGCTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAAGWPQR*PRGCTA
Trigger: TGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCC...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTAGGCCACGGTGCATCTaGAAGGGAGCGTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAARPRCI*KGASRE
Trigger: TTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCT...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGAGCTCCATCCAGTCCTaGCGCTCTACCCCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AGESVEEMQVERVCGSALSSIQS*RSTPVA
Trigger: CGCCACCGGGGTAGAGCGGCAGGACTGGATGGAGCT...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCCGGTCGCTGCCCGGTaGGCTGAACACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHPVAAR*AEHLHL
Trigger: CAGGTGGAGGTGTTCAGCCCACCGGGCAGCGACCGG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCAATGACCACGGCGAAGTaGACGGTGCCCTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPMTTAK*TVPLLR
Trigger: CCGCAGCAAGGGCACCGTCCACTTCGCCGTGGTCAT...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGGGCTGCCGGTGACGTaGCCGTCGGTGATGACCACG +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWGLPVT*PSVMTT
Trigger: CGTGGTCATCACCGACGGCCACGTCACCGGCAGCCC...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTCGGTTGATGGTGTCCTaGTCGATCTCGGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTRLMVS*SISVES
Trigger: CGACTCCACCGAGATCGACCAGGACACCATCAACCG...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGGTCCACGGTAGCCCTTaGGGCCAGAGGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQVHGSP*GQRAQG
Trigger: TCCCTGGGCCCTCTGGCCCCAAGGGCTACCGTGGAC...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTAACGCCCTTGGGTCCTaGGAATCCAATGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAANALGS*ESNGAF
Trigger: GAAGGCCCCATTGGATTCCCAGGACCCAAGGGCGTT...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CCGGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGAAACGCCCTTGGGTCCTaGGAATCCAATGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PGARRQATVHLQGSVQRRNALGS*ESNGAF
Trigger: GAAGGCCCCATTGGATTCCCAGGACCCAAGGGCGTT...TCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTAGCCAGGAACGCCCTTaGGTCCTGGGAATCCAATGG +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTSQERP*VLGIQW
Trigger: CCATTGGATTCCCAGGACCCAAGGGCGTTCCTGGCT...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCACACCAGGACTTCCTaGGGCTCCACTGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQHTRTS*GSTVAL
Trigger: CAAGGCAACAGTGGAGCCCCAGGAAGTCCTGGTGTG...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTACTCCCTGGGGGCCTCTaGGTCCAGGCAAGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SARERPEKTVRPAVGVGLLPGGL*VQASLG
Trigger: ACCGAGGCTTGCCTGGACCCAGAGGCCCCCAGGGAG...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTTCCTGGGACTCCTCTTaGCCCCCGAGGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTSWDSS*PPRAWL
Trigger: GAGCCAGGCCCTCGGGGGCCAAGAGGAGTCCCAGGA...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTCTCACCCTCGGGTCCTaGGACTCCTCTTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTLTLGS*DSSWPP
Trigger: CGGGGGCCAAGAGGAGTCCCAGGACCCGAGGGTGAG...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGTCGTCCCGAGGGTCGTaGCGCCCGTCCGTGATGACC +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKSSRGS*RPSVMT
Trigger: GGTCATCACGGACGGGCGCCACGACCCTCGGGACGA...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTCTCGTGCTTCTCGTaGAACATGTCCCCGATGCCG +
Preference number: 4 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQLSCFS*NMSPMP
Trigger: CGGCATCGGGGACATGTTCCACGAGAAGCACGAGAG...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGTTGGCAGGGAAGGTCTaGGCACACGATCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTLAGKV*AHDLRV
Trigger: GACCCTCAGATCGTGTGCCCAGACCTTCCCTGCCAA...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTTTGGCAGGGAAGGTCTaGGCACACGATCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAALAGKV*AHDLRV
Trigger: GACCCTCAGATCGTGTGCCCAGACCTTCCCTGCCAA...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CCGGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACCGTCCAAACCTGTTTaGCAGGGAAGGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PGARRQATVHLQGSVQRRPSKPV*QGRSGH
Trigger: GTGCCCAGACCTTCCCTGCCAAACAGGTTTGGACGG...TCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGCACGGTGGCACCTTTaGGGGACACCACGGACCCCG +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHARWHL*GTPRTP
Trigger: CGGGGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGC...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTTGTGTGGCTCGGCCTTaGCAGGAGGCGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEACVARP*QEAWGQ
Trigger: CTGCCCCCACGCCTCCTGCCAAGGCCGAGCCACACA...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGTGGAGCGGGTGTGTaGCTCGGCCTTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHGGAGV*LGLGRR
Trigger: CCTCCTGCCAAGGCCGAGCCACACACCCGCTCCACC...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGCCTAGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCGTGAAGAGCGGCATTTaGGCTGGCGAGTCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GLELLLGQPLSEARVKSGVKSGI*AGESVE
Trigger: CTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCAC...GCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCTAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGTGGTCCTGGGGAAGGTaGCGTCCGGCCCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKWSWGR*RPAPLP
Trigger: CGGAAGAGGGGCCGGACGCCACCTTCCCCAGGACCA...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCTCAGGGGAATGGTCCTaGGGAAGGTGGCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: ERPEKTVRPAVGVGLELLSGEWS*GRWRPA
Trigger: GGCCGGACGCCACCTTCCCCAGGACCATTCCCCTGA...GAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGCCCCGGTGGCGAACTTaGCCCGCTCGGCGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQPRWRT*PARRCR
Trigger: TCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGG...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCCCCGGTGGCGAACTTaGCCCGCTCGGCGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHPRWRT*PARRCR
Trigger: TCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTACCTGGGAAGCTAGTGTaGCAGGGAGGGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: SARERPEKTVRPAVGVGLPGKLV*QGGPSP
Trigger: CGGGCTGGGCCCTCCCTGCCACACTAGCTTCCCAGG...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGCCTGGGAAGCTAGTGTaGCAGGGAGGGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQPGKLV*QGGPSP
Trigger: CGGGCTGGGCCCTCCCTGCCACACTAGCTTCCCAGG...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGACGGACAGCTCTGTTTaGCAGGGAAGGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTTDSSV*QGRSGH
Trigger: GTGCCCAGACCTTCCCTGCCAAACAGAGCTGTCCGT...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTAGTTCAGGTATTGTGTaGTCTCCAGCGCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: RCWPCGTRARLAPWTGWASSGIV*SPAPRG
Trigger: TCCACGAGGCGCTGGAGACCACACAATACCTGAACT...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GCCAGAGTGAAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGGGGCCTGGCTGTCCTaGGTCTCCACGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ARVKSGIWAGESVEEMQVGAWLS*VSTGSC
Trigger: GCAGGACCCCGTGGAGACTCAGGACAGCCAGGCCCC...CACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGGCAAACTTGAGGGCTaGGGGTGTCCAGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SARERPEKTVRPAVGVGLGKLEG*GCPGAA
Trigger: GGCGGCACCTGGACACCCTCAGCCCTCAAGTTTGCC...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACCTCCATGTCATCGATaGACTTCTCAGCGACCAGGT +
Preference number: 4 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSPPCHR*TSQRPG
Trigger: ACCTGGTCGCTGAGAAGTTCATCGATGACATGGAGG...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAATCTCTGGCCTCCACTaGGAGCCAGCCTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SARERPEKTVRPAVGVGLISGLH*EPACRG
Trigger: CCCCCGACAGGCTGGCTCTCAGTGGAGGCCAGAGAT...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGATCTCTGGCCTCCACTaGGAGCCAGCCTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMISGLH*EPACRG
Trigger: CCCCCGACAGGCTGGCTCTCAGTGGAGGCCAGAGAT...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGCCCTTGCTGCGGTCCTaGCGGATCTGCTCCGTCATG +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWPLLRS*RICSVM
Trigger: CATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGG...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGGGACGGTGCCCTTGCTaGGGTCCTGCCGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQGRCPC*GPAGSA
Trigger: AGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCC...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGAGTGGACGGTGCCCTTaGTGCGGTCCTGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: AGESVEEMQVERVCGSALSGRCP*CGPAGS
Trigger: AGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACT...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGAGTGGACGGTGCCCTTaGTGCGGTCCTGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWSGRCP*CGPAGS
Trigger: AGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACT...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTATGTCCCGCAGGCCCTaGTCCTTCAGGTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GGSPPGHGASARERPEKTMSRRP*SFRFWL
Trigger: CAACCAGAACCTGAAGGAGCAGGGCCTGCGGGACAT...AGTCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCTGGTGGCGTAGTCGTTaGGGTAGAGCTCGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: ERPEKTVRPAVGVGLELLWWRSR*GRARAA
Trigger: CGCCGCACGAGCTCTACCGCAACGACTACGCCACCA...GAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGGGCCAGGGGCCCCCTTaGGACCGTCGGCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKGQGPP*DRRLQI
Trigger: AATTTGGAGCCGACGGTCGCAAGGGGGCCCCTGGCC...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGCCAGGGGCCCCCTTaGGACCGTCGGCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAGQGPP*DRRLQI
Trigger: AATTTGGAGCCGACGGTCGCAAGGGGGCCCCTGGCC...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGCCTAGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCCTGGGGCTCCACTGTTaGCTTGATACCCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLELLLGQPLSEARVKSGLGLHC*LDTPCF
Trigger: GAAGCAAGGGGTATCAAGGCAACAGTGGAGCCCCAG...GCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCAGCCTTTTTCTCCGGGTaGTCCTCGGGGTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPAFFSG*SSGSWV
Trigger: TACCCAGGACCCCGAGGAGCACCCGGAGAAAAAGGC...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGCCCTCGTGGCTGTACTaGACCACGCCCACACGCGTC +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKPSWLY*TTPTRV
Trigger: GACGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGG...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTCCCTCGTGGCTGTACTaGACCACGCCCACACGCGTC +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTPSWLY*TTPTRV
Trigger: GACGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGG...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGCTCCATCCAGTCCTaGCGCTCTACCCCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKSSIQS*RSTPVA
Trigger: CGCCACCGGGGTAGAGCGGCAGGACTGGATGGAGCT...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAAGAGGCTGGGAGCTaGCCCAGAGCCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTEEAGS*PRAPGR
Trigger: CCTTCCAGGGGCTCTGGGGCAGCTCCCAGCCTCTTC...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCAACGGAGCAGGTGCCCTaGAGCATCTTGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPTEQVP*SILAAP
Trigger: AGGTGCTGCCAAGATGCTCCAGGGCACCTGCTCCGT...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310645.9
CDS-3UTR CCA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGCTGCTGGGCCTGGATaGCCCCCAGGATTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SARERPEKTVRPAVGVGLAAGPG*PPGFPR
Trigger: TCTGGGGAATCCTGGGGGCCATCCAGGCCCAGCAGC...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATATGACCTCCTGCTGCTaGGCCTGGATGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHMTSCC*AWMAPR
Trigger: CCTGGGGGCCATCCAGGCCCAGCAGCAGGAGGTCAT...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGATGACCTCCTGCTGCTaGGCCTGGATGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKMTSCC*AWMAPR
Trigger: CCTGGGGGCCATCCAGGCCCAGCAGCAGGAGGTCAT...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGAGCACGAAGTACACGTaGATGGGGCAGTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTSTKYT*MGQSVF
Trigger: GAAGACCGACTGCCCCATCCACGTGTACTTCGTGCT...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp AGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGCCTTCAGGTTCTGGTTaGGGGCCACGGCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RAPPRAAAQRGQSEERHLPSGSG*GPRRRA
Trigger: GGCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGG...CAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGCCTGGTCGATCTCGGTaGAGTCGGGCAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: RAPPRAAAQRGQSEERHLPGRSR*SRAAWW
Trigger: CCACCATGCTGCCCGACTCCACCGAGATCGACCAGG...CAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGCCCTGTCTTCCCTTCTaGCCAGGCTCTCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWPCLPF*PGSPGS
Trigger: TGAGCCGGGAGAGCCTGGCCAGAAGGGAAGACAGGG...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGCCCAGGCCCGCCCTTaGCTCCTTTCACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMAQARP*LLSHQD
Trigger: GTCCTGGTGTGAAAGGAGCCAAGGGCGGGCCTGGGC...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGCCCAGGCCCGCCCTTaGCTCCTTTCACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTAQARP*LLSHQD
Trigger: GTCCTGGTGTGAAAGGAGCCAAGGGCGGGCCTGGGC...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCAGTTGCGCACCTGCTGTaGCTTGTCGCAGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPVAHLL*LVAGDG
Trigger: TCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAAC...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGGAGCGGCATTTGGGCTaGCGAGTCGGTAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQERHLG*RVGRGN
Trigger: ATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTC...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGCGATGGCCGTCACTGTaGCGTCGCGGTCGCACAGCG +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWRWPSL*RRGRTA
Trigger: CGCTGTGCGACCGCGACGTCACAGTGACGGCCATCG...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GGCCTAGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCCCTCCATGTCATCGATaGACTTCTCAGCGACCAGGT +
Preference number: 4 (lower is better)
Translates to: GLELLLGQPLSEARVKSGPPCHR*TSQRPG
Trigger: ACCTGGTCGCTGAGAAGTTCATCGATGACATGGAGG...GCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCTAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAACCGTGCGGAGGAAGGTaGCCGGGGGCTCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEPCGGR*PGARRQ
Trigger: CTGGCGGCGAGCCCCCGGTCACCTTCCTCCGCACGG...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCGGCCGGGTCCTGCGTaGGCTCCGTGGCGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVRPGPA*APWRLA
Trigger: TGCTAAACGCCACGGAGCTCACGCAGGACCCGGCCG...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGGAGCACGGAGCAGGTaGCCTGGAGCATCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWGARSR*PGASWQ
Trigger: CTGCCAAGATGCTCCAGGGCACCTGCTCCGTGCTCC...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000397763.5
CDS-3UTR GCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCAGAGCTCGTGCGGCGTaGTGGCGATGTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVRARAA*WRCPAG
Trigger: GCCTGCGGGACATCGCCAGCACGCCGCACGAGCTCT...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGTGGTGGCGTAGTCGTTaGGGTAGAGCTCGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMWWRSR*GRARAA
Trigger: CGCCGCACGAGCTCTACCGCAACGACTACGCCACCA...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGGTCATGTTGCGCACCTaGTGTGGCTTGTCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWVMLRT*CGLSQA
Trigger: CGCCTGCGACAAGCCACAGCAGGTGCGCAACATGAC...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGGAGGCCACGGTGCATCTaGAAGGGAGCGTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ELLLGQPLSEARVKSGIWRPRCI*KGASRE
Trigger: TTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCT...CCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGCCGCCAGGCCACGGTaGATCTGTTTGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHAARPR*ICLAGK
Trigger: CTTCCCTGCCAAACAGATGCACCGTGGCCTGGCGGC...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397763.5
CDS-3UTR CCA 90 bp GGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTCGAAGTACACGTGGATaGGGCAGTCGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGSPPGHGASARERPEKTRSTRG*GSRSSL
Trigger: CAGAGAAGACCGACTGCCCCATCCACGTGTACTTCG...AGTCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGCCGGTCGCTGCCCGGTaGGCTGAACACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWPVAAR*AEHLHL
Trigger: CAGGTGGAGGTGTTCAGCCCACCGGGCAGCGACCGG...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGATGACCACGGCGAAGTaGACGGTGCCCTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKMTTAK*TVPLLR
Trigger: CCGCAGCAAGGGCACCGTCCACTTCGCCGTGGTCAT...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGCCTTCAGGTTCTGGTTaGGGGCCACGGCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMPSGSG*GPRRRA
Trigger: GGCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGG...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTACCTTCAGGTTCTGGTTaGGGGCCACGGCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: SARERPEKTVRPAVGVGLPSGSG*GPRRRA
Trigger: GGCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGG...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGCCTGGTCGATCTCGGTaGAGTCGGGCAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQPGRSR*SRAAWW
Trigger: CCACCATGCTGCCCGACTCCACCGAGATCGACCAGG...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGGTCCTGGGAATCCAATaGGGCCTTCGATGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: AGESVEEMQVERVCGSALVLGIQ*GLRCPG
Trigger: ACCCGGGCATCGAAGGCCCCATTGGATTCCCAGGAC...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTACCCCTTGCTTCCCTTaGCCCCGATTTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTTPCFP*PRFLPG
Trigger: CCCCGGGAGAAATCGGGGCCAAGGGAAGCAAGGGGT...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GCCAGAGTGAAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGCAGCACCTGTGGCCCTaGAGTCCTGGTCCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: ARVKSGIWAGESVEEMQVQHLWP*SPGPEE
Trigger: CTCCTCGGGACCAGGACTTCAGGGCCACAGGTGCTG...CACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310645.9
CDS-3UTR TCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAGCTCGGCCTGCAGCTTaGTGCCCCCGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEARPAA*CPRRGC
Trigger: GCAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGC...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGCACCCTTCTCTCCTTTaGAGCCAGGAACGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AGESVEEMQVERVCGSALHPSLL*SQERPW
Trigger: CCAAGGGCGTTCCTGGCTTCAAAGGAGAGAAGGGTG...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGTCTCGGAGCTGTCGATaGCGAAGACCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWSRSCR*RRPRPG
Trigger: CCCTGGACGTGGTCTTCGTCATCGACAGCTCCGAGA...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGTCGTAGGCAAACTTaGGGGCTGAGGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAGRRQT*GLRVSR
Trigger: CCTGGACACCCTCAGCCCTCAAGTTTGCCTACGACC...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGTCAGCGAGGCCAGAGTaGAGAGCGGCATTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMSARPE*RAAFGL
Trigger: CAGCCCAAATGCCGCTCTTCACTCTGGCCTCGCTGA...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTTCAGCGAGGCCAGAGTaGAGAGCGGCATTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTSARPE*RAAFGL
Trigger: CAGCCCAAATGCCGCTCTTCACTCTGGCCTCGCTGA...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGCGGTCCTGCCGGATCTaGTCCGTCATGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KSGIWAGESVEEMQVERVRSCRI*SVMLAS
Trigger: GCTGGCCAACATGACGGAGCAGATCCGGCAGGACCG...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGCCGGCTCACCCATGTTaGCCTTGGCACCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMPAHPC*PWHPSV
Trigger: GACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCGG...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTACAATGGGGCCTTCGATaGCCGGGTCTCCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SARERPEKTVRPAVGVGLQWGLR*PGLPVF
Trigger: GAAGACAGGGAGACCCGGGCATCGAAGGCCCCATTG...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTACCTTGGGGCCATCGCTaGCTGGGCTGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVPWGHR*LGCPWC
Trigger: GCACCAAGGGCAGCCCAGGCAGCGATGGCCCCAAGG...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGCCTTTTTCTCCGGGTaGTCCTCGGGGTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAAFFSG*SSGSWV
Trigger: TACCCAGGACCCCGAGGAGCACCCGGAGAAAAAGGC...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGGCCTTTTTCTCCGGGTaGTCCTCGGGGTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQAFFSG*SSGSWV
Trigger: TACCCAGGACCCCGAGGAGCACCCGGAGAAAAAGGC...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGCCCTCGTGGCTGTACTaGACCACGCCCACACGCGTC +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWPSWLY*TTPTRV
Trigger: GACGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGG...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGTCATGTTGCGCACCTaGTGTGGCTTGTCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWVMLRT*CGLSQA
Trigger: CGCCTGCGACAAGCCACAGCAGGTGCGCAACATGAC...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGGCTGCTGGGCCTGGATaGCCCCCAGGATTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWAAGPG*PPGFPR
Trigger: TCTGGGGAATCCTGGGGGCCATCCAGGCCCAGCAGC...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGACGAACTGCTTCATGTaGAAGAGCAGGATGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTTNCFM*KSRMSV
Trigger: CACGGACATCCTGCTCTTCCACATGAAGCAGTTCGT...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGTGCTCCTTCAGGTTCTaGTTGGGGGCCACGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWCSFRF*LGATAK
Trigger: CTTCGCCGTGGCCCCCAACCAGAACCTGAAGGAGCA...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTAGTCCACGGTAGCCCTTaGGGCCAGAGGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVVHGSP*GQRAQG
Trigger: TCCCTGGGCCCTCTGGCCCCAAGGGCTACCGTGGAC...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGTCCTGGGAATCCAATaGGGCCTTCGATGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMVLGIQ*GLRCPG
Trigger: ACCCGGGCATCGAAGGCCCCATTGGATTCCCAGGAC...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGTCCTGGGAATCCAATaGGGCCTTCGATGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAVLGIQ*GLRCPG
Trigger: ACCCGGGCATCGAAGGCCCCATTGGATTCCCAGGAC...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGACCCCTTGCTTCCCTTaGCCCCGATTTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KSGIWAGESVEEMQVERVTPCFP*PRFLPG
Trigger: CCCCGGGAGAAATCGGGGCCAAGGGAAGCAAGGGGT...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCTGCCGGGGTCTCCCTTaGGGCCTGGCTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVCRGLP*GLAVLS
Trigger: ACTCAGGACAGCCAGGCCCCAAGGGAGACCCCGGCA...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGTGCTCCTCGGGGTCCTaGGTAGCTGAATCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWCSSGS*VAESRP
Trigger: AGGCCTGGATTCAGCTACCCAGGACCCCGAGGAGCA...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGCGTCGTCCAGCTGGATaGCCTCAAAGGTGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWRRPAG*PQRCPR
Trigger: ACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACG...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGCGTTCGTCGTCCAGCTaGATGGCCTCAAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKRSSSS*MASKVP
Trigger: GGGCACCTTTGAGGCCATCCAGCTGGACGACGAACG...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTGCTTGTCGCAGGCGATaGAGTAGAGGTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: DCKACGGRRPRAPPRAAAACRRR*SRGFHS
Trigger: AGAGTGAAAACCTCTACTCCATCGCCTGCGACAAGC...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGTTGCGCACCTGCTGTaGCTTGTCGCAGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMVAHLL*LVAGDG
Trigger: TCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAAC...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGTTGCGCACCTGCTGTaGCTTGTCGCAGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTVAHLL*LVAGDG
Trigger: TCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAAC...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGGTTGGATCAGGGGAATaGTCCTGGGGAAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWVGSGE*SWGRWR
Trigger: ACGCCACCTTCCCCAGGACCATTCCCCTGATCCAAC...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCTGTCGGGGGCAGCCCTaGGAAGCTAGTGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVCRGQP*EASVAG
Trigger: CCCTGCCACACTAGCTTCCCAGGGCTGCCCCCGACA...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCAGCAAGGGACACGGTaGCCACCAGCATGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHQQGTR*PPAWEE
Trigger: CTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGCAGCAAGGGACACGGTaGCCACCAGCATGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWQQGTR*PPAWEE
Trigger: CTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTG...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
3UTR CAA 72 bp GCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTaGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AAAQRGQSEERH*GWRVGRGNAGG
Trigger: TCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGTGGGGGACTGCATGGTaGCGCTCTCCGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWWGTAW*RSPRCP
Trigger: TGGACACCTCGGAGAGCGTCACCATGCAGTCCCCCA...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGCACCCTTCTCTCCTTTaGAGCCAGGAACGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQHPSLL*SQERPW
Trigger: CCAAGGGCGTTCCTGGCTTCAAAGGAGAGAAGGGTG...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTAGTTCTTCTCCAGTGTaGAGTTGGTGTACCCAATGC +
Preference number: 4 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTSSSPV*SWCTQC
Trigger: GCATTGGGTACACCAACTTCACACTGGAGAAGAACT...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR TCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGACAGCGCCCGCAAGTTaGGGTCATCGTCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWTAPAS*GHRPEG
Trigger: ACCCTCGGGACGATGACCTCAACTTGCGGGCGCTGT...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCAGTGGACGGTGCCCTTaGTGCGGTCCTGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVSGRCP*CGPAGS
Trigger: AGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACT...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGCCTTGGCTCCTTTGTTaGCAACCTCTCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMPWLLC*QPLQPG
Trigger: GCCTGGCTGGAGAGGTTGGCAACAAAGGAGCCAAGG...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGATGGCCTCAAAGGTaGCCTCGTGGCTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAGWPQR*PRGCTA
Trigger: TGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCC...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGAGCACGAAGTACACGTaGATGGGGCAGTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGESVEEMQVERVCGSALSTKYT*MGQSVF
Trigger: GAAGACCGACTGCCCCATCCACGTGTACTTCGTGCT...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAGCTCGTGCGGCGTGCTaGCGATGTCCCGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEARAAC*RCPAGP
Trigger: AGGGCCTGCGGGACATCGCCAGCACGCCGCACGAGC...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGTCGGGCAGCATGGTaGCGTAGTCGTTGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKSRAAW*RSRCGR
Trigger: TCTACCGCAACGACTACGCCACCATGCTGCCCGACT...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGCGGTTGATGGTGTCCTaGTCGATCTCGGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMRLMVS*SISVES
Trigger: CGACTCCACCGAGATCGACCAGGACACCATCAACCG...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGCACCCATGTTGCCCTTaGCACCCTTCTGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMHPCCP*HPSVHG
Trigger: ACCGTGGACAGAAGGGTGCCAAGGGCAACATGGGTG...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGCACCCATGTTGCCCTTaGCACCCTTCTGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWHPCCP*HPSVHG
Trigger: ACCGTGGACAGAAGGGTGCCAAGGGCAACATGGGTG...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAACGCCCTTGGGTCCTaGGAATCCAATGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKNALGS*ESNGAF
Trigger: GAAGGCCCCATTGGATTCCCAGGACCCAAGGGCGTT...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGCCAGGAACGCCCTTaGGTCCTGGGAATCCAATGG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKSQERP*VLGIQW
Trigger: CCATTGGATTCCCAGGACCCAAGGGCGTTCCTGGCT...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTAGCCAGGAACGCCCTTaGGTCCTGGGAATCCAATGG +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEASQERP*VLGIQW
Trigger: CCATTGGATTCCCAGGACCCAAGGGCGTTCCTGGCT...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAAGCCAGGAACGCCCTTaGGTCCTGGGAATCCAATGG +
Preference number: 4 (lower is better)
Translates to: SARERPEKTVRPAVGVGLSQERP*VLGIQW
Trigger: CCATTGGATTCCCAGGACCCAAGGGCGTTCCTGGCT...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAATGCCTGGGCTGCCCTTaGTGCCGGGGTCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLECLGCP*CRGLPC
Trigger: GCAGGGGAGACCCCGGCACCAAGGGCAGCCCAGGCA...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGCCCCCGAGGGCCTaGCTCACCAGGGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDWPPRA*LTRGTR
Trigger: CCTGGTCCCCCTGGTGAGCCAGGCCCTCGGGGGCCA...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp CACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCTGGCCCCCGAGGGCCTaGCTCACCAGGGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: HDVPVHQLKGVNEQLHPVWPPRA*LTRGTR
Trigger: CCTGGTCCCCCTGGTGAGCCAGGCCCTCGGGGGCCA...GACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTCAAAGGTGCCCTCGTaGCTGTACTGCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: KSGIWAGESVEEMQVERVSKVPS*LYCTTP
Trigger: GGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGA...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGCGTCGTCCAGCTGGATaGCCTCAAAGGTGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: KSGIWAGESVEEMQVERVRRPAG*PQRCPR
Trigger: ACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACG...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGTTGGCAGGGAAGGTCTaGGCACACGATCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMLAGKV*AHDLRV
Trigger: GACCCTCAGATCGTGTGCCCAGACCTTCCCTGCCAA...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTCACGGTGCATCTGTTTaGCAGGGAAGGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAHGASV*QGRSGH
Trigger: GTGCCCAGACCTTCCCTGCCAAACAGATGCACCGTG...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397763.5
CDS-3UTR TCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGGCTCCACTGTTGCCTTaGTACCCCTTGCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQAPLLP*YPLLPL
Trigger: CAAGGGAAGCAAGGGGTATCAAGGCAACAGTGGAGC...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGGGTCGTAGGCAAACTTaGGGGCTGAGGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWGRRQT*GLRVSR
Trigger: CCTGGACACCCTCAGCCCTCAAGTTTGCCTACGACC...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGCCTCCATGTCATCGATaGACTTCTCAGCGACCAGGT +
Preference number: 4 (lower is better)
Translates to: AGESVEEMQVERVCGSALPPCHR*TSQRPG
Trigger: ACCTGGTCGCTGAGAAGTTCATCGATGACATGGAGG...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGACCGTGCGGAGGAAGGTaGCCGGGGGCTCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRPCGGR*PGARRQ
Trigger: CTGGCGGCGAGCCCCCGGTCACCTTCCTCCGCACGG...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGCCGGCTCACCCATGTTaGCCTTGGCACCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWPAHPC*PWHPSV
Trigger: GACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCGG...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCAATGGGGCCTTCGATaGCCGGGTCTCCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVQWGLR*PGLPVF
Trigger: GAAGACAGGGAGACCCGGGCATCGAAGGCCCCATTG...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGCTGGGGCTCCACTGTTaGCTTGATACCCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWLGLHC*LDTPCF
Trigger: GAAGCAAGGGGTATCAAGGCAACAGTGGAGCCCCAG...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCAGAACAGCGTCATGTTaGGCACCTGCTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ERPEKTVRPAVGVGLELLRTASC*APAVAC
Trigger: ACAAGCCACAGCAGGTGCGCAACATGACGCTGTTCT...GAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCGAAGACTGTAAGGCCTaGGGTGGGCGTCGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVEDCKA*GGRRPR
Trigger: TCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTC...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTCGAAGTACACGTGGATaGGGCAGTCGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEARSTRG*GSRSSL
Trigger: CAGAGAAGACCGACTGCCCCATCCACGTGTACTTCG...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCAACGAACTGCTTCATGTaGAAGAGCAGGATGTCCGTG +
Preference number: 4 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPTNCFM*KSRMSV
Trigger: CACGGACATCCTGCTCTTCCACATGAAGCAGTTCGT...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAGGGCTGCCGGTGACGTaGCCGTCGGTGATGACCACG +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEGLPVT*PSVMTT
Trigger: CGTGGTCATCACCGACGGCCACGTCACCGGCAGCCC...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAGTCCACGGTAGCCCTTaGGGCCAGAGGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEVHGSP*GQRAQG
Trigger: TCCCTGGGCCCTCTGGCCCCAAGGGCTACCGTGGAC...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTGGGCCCTCTGCGTCCTaGGCGGCCAGGGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSGPSAS*AARVPL
Trigger: AAGGGGGACCCTGGCCGCCCAGGACGCAGAGGGCCC...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp CACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCTGCCTGGGCTGCCCTTaGTGCCGGGGTCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: HDVPVHQLKGVNEQLHPVCLGCP*CRGLPC
Trigger: GCAGGGGAGACCCCGGCACCAAGGGCAGCCCAGGCA...GACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCTGCTCCTCGGGGTCCTaGGTAGCTGAATCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVCSSGS*VAESRP
Trigger: AGGCCTGGATTCAGCTACCCAGGACCCCGAGGAGCA...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGCGTTCGTCGTCCAGCTaGATGGCCTCAAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWRSSSS*MASKVP
Trigger: GGGCACCTTTGAGGCCATCCAGCTGGACGACGAACG...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGAACACACGTGTCTTCTaGCGCCGGCTCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMNTRVF*RRLSLM
Trigger: CATCAAGGAGAGCCGGCGCCAGAAGACACGTGTGTT...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAATCGTCCCGAGGGTCGTaGCGCCCGTCCGTGATGACC +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLESSRGS*RPSVMT
Trigger: GGTCATCACGGACGGGCGCCACGACCCTCGGGACGA...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GCCAGAGTGAAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGACAGGGACAGGAAGCTaGCAGGGAGCTAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: ARVKSGIWAGESVEEMQVTGTGS*QGARRP
Trigger: GGGTCTCCTAGCTCCCTGCCAGCTTCCTGTCCCTGT...CACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCAGCAAGGGACACGGTaGCCACCAGCATGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVQQGTR*PPAWEE
Trigger: CTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTG...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGAGACGGAGGAGAGACTaGAAGATGCAGCCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: EERLEDAAAARDTVATSMRRRRD*KMQPQQ
Trigger: TTGCTGCGGCTGCATCTTCCAGTCTCTCCTCCGTCT...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCAAGTTCTTCTCCAGTGTaGAGTTGGTGTACCCAATGC +
Preference number: 4 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPSSSPV*SWCTQC
Trigger: GCATTGGGTACACCAACTTCACACTGGAGAAGAACT...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACCGGCCGGGTCCTGCGTaGGCTCCGTGGCGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDRPGPA*APWRLA
Trigger: TGCTAAACGCCACGGAGCTCACGCAGGACCCGGCCG...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAACTGCGGCACGAACTaGTTCATGTGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKNCGTN*FMWKSR
Trigger: CCTGCTCTTCCACATGAAGCAGTTCGTGCCGCAGTT...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAAACTGCGGCACGAACTaGTTCATGTGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SARERPEKTVRPAVGVGLNCGTN*FMWKSR
Trigger: CCTGCTCTTCCACATGAAGCAGTTCGTGCCGCAGTT...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGAGCTGGCTGATGAACTaGGGCACGAACTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: DCSPADPDSRSLASTESQSWLMN*GTNCFM
Trigger: CATGAAGCAGTTCGTGCCGCAGTTCATCAGCCAGCT...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCAAGGAGCTGATGCCCTaGAGGTTCTTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ERPEKTVRPAVGVGLELLKELMP*RFLMKE
Trigger: CTCCTTCATCAAGAACCTGCAGGGCATCAGCTCCTT...GAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGAAGGAGCTGATGCCCTaGAGGTTCTTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: EDAAAARDTVATSMGRGWKELMP*RFLMKE
Trigger: CTCCTTCATCAAGAACCTGCAGGGCATCAGCTCCTT...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGACGGCGAAGAGCCGGATaGCCTCCTCGCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRRRRAG*PPRGPA
Trigger: AGCGGGCCCGCGAGGAGGGCATCCGGCTCTTCGCCG...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAACTCCCCTGGACTCCCTaGTTCCCCCGGGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLELPWTP*FPRVTV
Trigger: GACGGTTACCCGGGGGAAGCAGGGAGTCCAGGGGAG...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCCCACGATGTCCCTGTaGACCAGCTTAAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHPTMSL*TSLKVS
Trigger: TGACACCTTTAAGCTGGTGCACAGGGACATCGTGGG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGCCCGGCTGGGCGGGTaGCCGGGCTTTAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRARLGG*PGFSRG
Trigger: CCCTCTGCTAAAGCCCGGGCACCCGCCCAGCCGGGC...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACGCCCGGCTGGGCGGGTaGCCGGGCTTTAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDARLGG*PGFSRG
Trigger: CCCTCTGCTAAAGCCCGGGCACCCGCCCAGCCGGGC...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGAGCACGAAGTACACGTaGATGGGGCAGTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KSGIWAGESVEEMQVERVSTKYT*MGQSVF
Trigger: GAAGACCGACTGCCCCATCCACGTGTACTTCGTGCT...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGACGAACTGCTTCATGTaGAAGAGCAGGATGTCCGTG +
Preference number: 4 (lower is better)
Translates to: AGESVEEMQVERVCGSALTNCFM*KSRMSV
Trigger: CACGGACATCCTGCTCTTCCACATGAAGCAGTTCGT...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAGCTCGTGCGGCGTGCTaGCGATGTCCCGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERARAAC*RCPAGP
Trigger: AGGGCCTGCGGGACATCGCCAGCACGCCGCACGAGC...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCGGTTGATGGTGTCCTaGTCGATCTCGGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVRLMVS*SISVES
Trigger: CGACTCCACCGAGATCGACCAGGACACCATCAACCG...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTAGTCCTGGGAATCCAATaGGGCCTTCGATGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVVLGIQ*GLRCPG
Trigger: ACCCGGGCATCGAAGGCCCCATTGGATTCCCAGGAC...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGGGCCCTCTGCGTCCTaGGCGGCCAGGGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRGPSAS*AARVPL
Trigger: AAGGGGGACCCTGGCCGCCCAGGACGCAGAGGGCCC...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGGGGCCATCGCTGCCTaGGCTGCCCTTGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRGAIAA*AALGAG
Trigger: CCCGGCACCAAGGGCAGCCCAGGCAGCGATGGCCCC...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACCTCACCCTCGGGTCCTaGGACTCCTCTTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDLTLGS*DSSWPP
Trigger: CGGGGGCCAAGAGGAGTCCCAGGACCCGAGGGTGAG...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTATCAAAGGTGCCCTCGTaGCTGTACTGCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVSKVPS*LYCTTP
Trigger: GGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGA...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGTCCTGGGGAAGGTaGCGTCCGGCCCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDWSWGR*RPAPLP
Trigger: CGGAAGAGGGGCCGGACGCCACCTTCCCCAGGACCA...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTCGCTGCCCGGTGGGCTaGACACCTCCACCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSRCPVG*TPPPGQ
Trigger: CTGACCAGGTGGAGGTGTTCAGCCCACCGGGCAGCG...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCGCTCCACTGTTGCCTTaGTACCCCTTGCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVAPLLP*YPLLPL
Trigger: CAAGGGAAGCAAGGGGTATCAAGGCAACAGTGGAGC...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp CACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCGGCAAACTTGAGGGCTaGGGGTGTCCAGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: HDVPVHQLKGVNEQLHPVGKLEG*GCPGAA
Trigger: GGCGGCACCTGGACACCCTCAGCCCTCAAGTTTGCC...GACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp ACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCGGCGAGATGACCTCCTaGTGCTGGGCCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: TMSLCTSLKVSMNSSIQSGEMTS*CWAWMA
Trigger: GGCCATCCAGGCCCAGCAGCAGGAGGTCATCTCGCC...GGACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTAGAGCTCGTGCGGCGTaGTGGCGATGTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSRARAA*WRCPAG
Trigger: GCCTGCGGGACATCGCCAGCACGCCGCACGAGCTCT...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp CACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCGTGGCCCTGAAGTCCTaGTCCCGAGGAGGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: HDVPVHQLKGVNEQLHPVVALKS*SRGGSA
Trigger: AGCGGAGCCTCCTCGGGACCAGGACTTCAGGGCCAC...GACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310645.9
CDS-3UTR CCA 90 bp ACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCATGACCTCCTGCTGCTaGGCCTGGATGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TMSLCTSLKVSMNSSIQSMTSCC*AWMAPR
Trigger: CCTGGGGGCCATCCAGGCCCAGCAGCAGGAGGTCAT...GGACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGCAGTCGGTCTTCTCTaGGCAGTTGTTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTAVGLL*AVVVSL
Trigger: GAGAGAAACAACAACTGCCCAGAGAAGACCGACTGC...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGACGAACTGCTTCATGTaGAAGAGCAGGATGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKTNCFM*KSRMSV
Trigger: CACGGACATCCTGCTCTTCCACATGAAGCAGTTCGT...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGCTCGTGCGGCGTGCTaGCGATGTCCCGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRARAAC*RCPAGP
Trigger: AGGGCCTGCGGGACATCGCCAGCACGCCGCACGAGC...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAGTCCACGGTAGCCCTTaGGGCCAGAGGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERVHGSP*GQRAQG
Trigger: TCCCTGGGCCCTCTGGCCCCAAGGGCTACCGTGGAC...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTACACACCAGGACTTCCTaGGGCTCCACTGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVHTRTS*GSTVAL
Trigger: CAAGGCAACAGTGGAGCCCCAGGAAGTCCTGGTGTG...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGATCCCTCGGGGCCGCGTaGGCCGGGCTCGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRSLGAA*AGLAFF
Trigger: GAAAAAGGCGAGCCCGGCCCACGCGGCCCCGAGGGA...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGATCCTGGGACTCCTCTTaGCCCCCGAGGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERSWDSS*PPRAWL
Trigger: GAGCCAGGCCCTCGGGGGCCAAGAGGAGTCCCAGGA...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCAACACACGTGTCTTCTaGCGCCGGCTCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVNTRVF*RRLSLM
Trigger: CATCAAGGAGAGCCGGCGCCAGAAGACACGTGTGTT...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTTGGTCCTGGGGAAGGTaGCGTCCGGCCCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLWSWGR*RPAPLP
Trigger: CGGAAGAGGGGCCGGACGCCACCTTCCCCAGGACCA...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTCCCCGGTGGCGAACTTaGCCCGCTCGGCGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLPRWRT*PARRCR
Trigger: TCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGG...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGCCGCTCTACCCCGGTaGCGAACTTGGCCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRAALPR*RTWPAR
Trigger: CCGAGCGGGCCAAGTTCGCCACCGGGGTAGAGCGGC...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGGGGACTGCATGGTaGCGCTCTCCGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDWGTAW*RSPRCP
Trigger: TGGACACCTCGGAGAGCGTCACCATGCAGTCCCCCA...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTAGTTCTTCTCCAGTGTaGAGTTGGTGTACCCAATGC +
Preference number: 4 (lower is better)
Translates to: PWKDCSPADPDSRSLASTSSSPV*SWCTQC
Trigger: GCATTGGGTACACCAACTTCACACTGGAGAAGAACT...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp ACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCACAGCGCCCGCAAGTTaGGGTCATCGTCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: TMSLCTSLKVSMNSSIQSTAPAS*GHRPEG
Trigger: ACCCTCGGGACGATGACCTCAACTTGCGGGCGCTGT...GGACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATCTCTGGCCTCCACTaGGAGCCAGCCTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLISGLH*EPACRG
Trigger: CCCCCGACAGGCTGGCTCTCAGTGGAGGCCAGAGAT...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAATGTCCGTGGGGGACTaGATGGTGACGCTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEMSVGD*MVTLSE
Trigger: CTCGGAGAGCGTCACCATGCAGTCCCCCACGGACAT...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACCGGTCCTGCCGGATCTaGTCCGTCATGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDRSCRI*SVMLAS
Trigger: GCTGGCCAACATGACGGAGCAGATCCGGCAGGACCG...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp ACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCAGCCAGGAGGTCCGATaGGCCCCAGCTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TMSLCTSLKVSMNSSIQSSQEVR*APACPS
Trigger: AGAAGGGCAAGCTGGGGCGCATCGGACCTCCTGGCT...GGACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTCTCCCCTGGACTCCCTaGTTCCCCCGGGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSLPWTP*FPRVTV
Trigger: GACGGTTACCCGGGGGAAGCAGGGAGTCCAGGGGAG...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACGGCCAGGGTCCCCCTTaGCGCCTTGGTCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDGQGPP*RLGLLA
Trigger: AGCGAGGAGACCAAGGCGGCAAGGGGGACCCTGGCC...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GCCAGAGTGAAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGTGCCTTGATACCCCTTaGTTCCCTTGGCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: ARVKSGIWAGESVEEMQVCLDTP*FPWPRF
Trigger: AAATCGGGGCCAAGGGAAGCAAGGGGTATCAAGGCA...CACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTGAAGAGGCTGGGAGCTaGCCCAGAGCCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLEEAGS*PRAPGR
Trigger: CCTTCCAGGGGCTCTGGGGCAGCTCCCAGCCTCTTC...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTGCTGCTGGGCCTGGATaGCCCCCAGGATTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLAAGPG*PPGFPR
Trigger: TCTGGGGAATCCTGGGGGCCATCCAGGCCCAGCAGC...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGGCAGTCGGTCTTCTCTaGGCAGTTGTTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KSGIWAGESVEEMQVERVAVGLL*AVVVSL
Trigger: GAGAGAAACAACAACTGCCCAGAGAAGACCGACTGC...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTACGAAGTACACGTGGATaGGGCAGTCGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVRSTRG*GSRSSL
Trigger: CAGAGAAGACCGACTGCCCCATCCACGTGTACTTCG...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTAAACTCGTTCTGCAGCTaGCTGATGAACTGCGGCACG +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVNSFCS*LMNCGT
Trigger: CGTGCCGCAGTTCATCAGCCAGCTGCAGAACGAGTT...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACATGACCACGGCGAAGTaGACGGTGCCCTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDMTTAK*TVPLLR
Trigger: CCGCAGCAAGGGCACCGTCCACTTCGCCGTGGTCAT...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAATCAAAGGTGCCCTCGTaGCTGTACTGCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLESKVPS*LYCTTP
Trigger: GGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGA...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp CACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCAGGAGACCCGCACGGTaGCACCTTTGGGGGACACCA +
Preference number: 4 (lower is better)
Translates to: HDVPVHQLKGVNEQLHPVRRPAR*HLWGTP
Trigger: TGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCT...GACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGATGTGTGGCTCGGCCTTaGCAGGAGGCGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRCVARP*QEAWGQ
Trigger: CTGCCCCCACGCCTCCTGCCAAGGCCGAGCCACACA...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGGCGTTTAGCAACTGTTaGATCAGGGGAATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSGIWAGESVEEMQVERVAFSNC*IRGMVL
Trigger: CAGGACCATTCCCCTGATCCAACAGTTGCTAAACGC...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGATGTCGGGGGCAGCCCTaGGAAGCTAGTGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERCRGQP*EASVAG
Trigger: CCCTGCCACACTAGCTTCCCAGGGCTGCCCCCGACA...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAACAGCGCCCGCAAGTTaGGGTCATCGTCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERTAPAS*GHRPEG
Trigger: ACCCTCGGGACGATGACCTCAACTTGCGGGCGCTGT...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACGGCGAGATGACCTCCTaGTGCTGGGCCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDGEMTS*CWAWMA
Trigger: GGCCATCCAGGCCCAGCAGCAGGAGGTCATCTCGCC...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACATGTCCGTGGGGGACTaGATGGTGACGCTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDMSVGD*MVTLSE
Trigger: CTCGGAGAGCGTCACCATGCAGTCCCCCACGGACAT...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTAAGCTGGCTGATGAACTaGGGCACGAACTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVSWLMN*GTNCFM
Trigger: CATGAAGCAGTTCGTGCCGCAGTTCATCAGCCAGCT...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAAGCCAGGAGGTCCGATaGGCCCCAGCTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERSQEVR*APACPS
Trigger: AGAAGGGCAAGCTGGGGCGCATCGGACCTCCTGGCT...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTATGCCTTGATACCCCTTaGTTCCCTTGGCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVCLDTP*FPWPRF
Trigger: AAATCGGGGCCAAGGGAAGCAAGGGGTATCAAGGCA...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAACCTTGGCTCCTTTGTTaGCAACCTCTCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEPWLLC*QPLQPG
Trigger: GCCTGGCTGGAGAGGTTGGCAACAAAGGAGCCAAGG...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACAGCTCCATCCAGTCCTaGCGCTCTACCCCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDSSIQS*RSTPVA
Trigger: CGCCACCGGGGTAGAGCGGCAGGACTGGATGGAGCT...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGCTCCTTCAGGTTCTaGTTGGGGGCCACGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDCSFRF*LGATAK
Trigger: CTTCGCCGTGGCCCCCAACCAGAACCTGAAGGAGCA...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAAGTCGGGCAGCATGGTaGCGTAGTCGTTGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLESRAAW*RSRCGR
Trigger: TCTACCGCAACGACTACGCCACCATGCTGCCCGACT...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACCCTGTCTTCCCTTCTaGCCAGGCTCTCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERPCLPF*PGSPGS
Trigger: TGAGCCGGGAGAGCCTGGCCAGAAGGGAAGACAGGG...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACTCCCCCTTGCCGCCTTaGTCTCCTCGCTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDSPLPP*SPRSPG
Trigger: TCCAGGGGAGCGAGGAGACCAAGGCGGCAAGGGGGA...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGCCCAGGCCCGCCCTTaGCTCCTTTCACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRAQARP*LLSHQD
Trigger: GTCCTGGTGTGAAAGGAGCCAAGGGCGGGCCTGGGC...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACCGTCGTCCAGCTGGATaGCCTCAAAGGTGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDRRPAG*PQRCPR
Trigger: ACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACG...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAACCGTCCAAACCTGTTTaGCAGGGAAGGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEPSKPV*QGRSGH
Trigger: GTGCCCAGACCTTCCCTGCCAAACAGGTTTGGACGG...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAGTGAAGAGCGGCATTTaGGCTGGCGAGTCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEVKSGI*AGESVE
Trigger: CTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCAC...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACTCAGGGGAATGGTCCTaGGGAAGGTGGCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDSGEWS*GRWRPA
Trigger: GGCCGGACGCCACCTTCCCCAGGACCATTCCCCTGA...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAGTTGGATCAGGGGAATaGTCCTGGGGAAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEVGSGE*SWGRWR
Trigger: ACGCCACCTTCCCCAGGACCATTCCCCTGATCCAAC...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATGTCCGTGGGGGACTaGATGGTGACGCTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLMSVGD*MVTLSE
Trigger: CTCGGAGAGCGTCACCATGCAGTCCCCCACGGACAT...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACATGTCCCGCAGGCCCTaGTCCTTCAGGTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDMSRRP*SFRFWL
Trigger: CAACCAGAACCTGAAGGAGCAGGGCCTGCGGGACAT...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTCAATGGGGCCTTCGATaGCCGGGTCTCCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLQWGLR*PGLPVF
Trigger: GAAGACAGGGAGACCCGGGCATCGAAGGCCCCATTG...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGGCCAGGGTCCCCCTTaGCGCCTTGGTCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKGQGPP*RLGLLA
Trigger: AGCGAGGAGACCAAGGCGGCAAGGGGGACCCTGGCC...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTGAAGACTGTAAGGCCTaGGGTGGGCGTCGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLEDCKA*GGRRPR
Trigger: TCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTC...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACGGAGAGACTGGAAGATaGAGCCGCAGCAAGGGACAC +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDGETGR*SRSKGH
Trigger: GTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCC...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAACGGAGCAGGTGCCCTaGAGCATCTTGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERTEQVP*SILAAP
Trigger: AGGTGCTGCCAAGATGCTCCAGGGCACCTGCTCCGT...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000397763.5
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAAACTCGTTCTGCAGCTaGCTGATGAACTGCGGCACG +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLENSFCS*LMNCGT
Trigger: CGTGCCGCAGTTCATCAGCCAGCTGCAGAACGAGTT...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGATGCTCCTCGGGGTCCTaGGTAGCTGAATCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERCSSGS*VAESRP
Trigger: AGGCCTGGATTCAGCTACCCAGGACCCCGAGGAGCA...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTTCAAAGGTGCCCTCGTaGCTGTACTGCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLSKVPS*LYCTTP
Trigger: GGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGA...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp CACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCTCTCGTGCTTCTCGTaGAACATGTCCCCGATGCCG +
Preference number: 4 (lower is better)
Translates to: HDVPVHQLKGVNEQLHPVLSCFS*NMSPMP
Trigger: CGGCATCGGGGACATGTTCCACGAGAAGCACGAGAG...GACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAAGACGGAGGAGAGACTaGAAGATGCAGCCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLERRRRD*KMQPQQ
Trigger: TTGCTGCGGCTGCATCTTCCAGTCTCTCCTCCGTCT...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACACCCTTCTCTCCTTTaGAGCCAGGAACGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERHPSLL*SQERPW
Trigger: CCAAGGGCGTTCCTGGCTTCAAAGGAGAGAAGGGTG...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGGGCAAACTTGAGGGCTaGGGGTGTCCAGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: VILDLGWALNSMTRVLIKGKLEG*GCPGAA
Trigger: GGCGGCACCTGGACACCCTCAGCCCTCAAGTTTGCC...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAAGCTGGCTGATGAACTaGGGCACGAACTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLESWLMN*GTNCFM
Trigger: CATGAAGCAGTTCGTGCCGCAGTTCATCAGCCAGCT...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGGACGGTGCCCTTGCTaGGGTCCTGCCGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKGRCPC*GPAGSA
Trigger: AGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCC...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTCCTTGGCTCCTTTGTTaGCAACCTCTCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLPWLLC*QPLQPG
Trigger: GCCTGGCTGGAGAGGTTGGCAACAAAGGAGCCAAGG...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAGGAGAGACTGGAAGATaGAGCCGCAGCAAGGGACAC +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERGETGR*SRSKGH
Trigger: GTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCC...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAATGCCGGGGTCTCCCTTaGGGCCTGGCTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKCRGLP*GLAVLS
Trigger: ACTCAGGACAGCCAGGCCCCAAGGGAGACCCCGGCA...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAACAGGGACAGGAAGCTaGCAGGGAGCTAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRTGTGS*QGARRP
Trigger: GGGTCTCCTAGCTCCCTGCCAGCTTCCTGTCCCTGT...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTGTTGGATCAGGGGAATaGTCCTGGGGAAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSVGSGE*SWGRWR
Trigger: ACGCCACCTTCCCCAGGACCATTCCCCTGATCCAAC...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGATTCTGGACTTGGGGTaGGCCTTAAATTCAATGACC +
Preference number: 4 (lower is better)
Translates to: APWRLATVGSGEWSWGRWILDLG*ALNSMT
Trigger: GGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAAT...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CCA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTAGTTCAAAGCCTTTATTaGGTCAGGGCTTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVVQSLY*VRACSR
Trigger: TCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAAC...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR GCA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGTGGTGGCGTAGTCGTTaGGGTAGAGCTCGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: VILDLGWALNSMTRVLIKWWRSR*GRARAA
Trigger: CGCCGCACGAGCTCTACCGCAACGACTACGCCACCA...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAAGCCAGGAGGTCCGATaGGCCCCAGCTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKSQEVR*APACPS
Trigger: AGAAGGGCAAGCTGGGGCGCATCGGACCTCCTGGCT...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTCTGGGGCTCCACTGTTaGCTTGATACCCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLLGLHC*LDTPCF
Trigger: GAAGCAAGGGGTATCAAGGCAACAGTGGAGCCCCAG...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACCCCACGATGTCCCTGTaGACCAGCTTAAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDPTMSL*TSLKVS
Trigger: TGACACCTTTAAGCTGGTGCACAGGGACATCGTGGG...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACGGAGAGACTGGAAGATaGAGCCGCAGCAAGGGACAC +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDGETGR*SRSKGH
Trigger: GTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCC...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTCGAAGTACACGTGGATaGGGCAGTCGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSRSTRG*GSRSSL
Trigger: CAGAGAAGACCGACTGCCCCATCCACGTGTACTTCG...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAAACTCGTTCTGCAGCTaGCTGATGAACTGCGGCACG +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERNSFCS*LMNCGT
Trigger: CGTGCCGCAGTTCATCAGCCAGCTGCAGAACGAGTT...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTAACTCGTTCTGCAGCTaGCTGATGAACTGCGGCACG +
Preference number: 4 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSNSFCS*LMNCGT
Trigger: CGTGCCGCAGTTCATCAGCCAGCTGCAGAACGAGTT...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGACACACCAGGACTTCCTaGGGCTCCACTGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRHTRTS*GSTVAL
Trigger: CAAGGCAACAGTGGAGCCCCAGGAAGTCCTGGTGTG...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCACACCAGGACTTCCTaGGGCTCCACTGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDHTRTS*GSTVAL
Trigger: CAAGGCAACAGTGGAGCCCCAGGAAGTCCTGGTGTG...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAGCTTGTCGCAGGCGATaGAGTAGAGGTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: DQGSYKESGHRKTEERLEACRRR*SRGFHS
Trigger: AGAGTGAAAACCTCTACTCCATCGCCTGCGACAAGC...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACTTGGCAGGGAAGGTCTaGGCACACGATCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDLAGKV*AHDLRV
Trigger: GACCCTCAGATCGTGTGCCCAGACCTTCCCTGCCAA...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTGAGCGGCATTTGGGCTaGCGAGTCGGTAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLERHLG*RVGRGN
Trigger: ATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTC...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAATCTCGGAGCTGTCGATaGCGAAGACCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKSRSCR*RRPRPG
Trigger: CCCTGGACGTGGTCTTCGTCATCGACAGCTCCGAGA...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGGGTCGTAGGCAAACTTaGGGGCTGAGGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VILDLGWALNSMTRVLIKGRRQT*GLRVSR
Trigger: CCTGGACACCCTCAGCCCTCAAGTTTGCCTACGACC...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAAACTGCGGCACGAACTaGTTCATGTGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERNCGTN*FMWKSR
Trigger: CCTGCTCTTCCACATGAAGCAGTTCGTGCCGCAGTT...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTAGCTGGCTGATGAACTaGGGCACGAACTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLSWLMN*GTNCFM
Trigger: CATGAAGCAGTTCGTGCCGCAGTTCATCAGCCAGCT...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTTGCCTTGATACCCCTTaGTTCCCTTGGCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLCLDTP*FPWPRF
Trigger: AAATCGGGGCCAAGGGAAGCAAGGGGTATCAAGGCA...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGATGCCTTGATACCCCTTaGTTCCCTTGGCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERCLDTP*FPWPRF
Trigger: AAATCGGGGCCAAGGGAAGCAAGGGGTATCAAGGCA...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAAACACACGTGTCTTCTaGCGCCGGCTCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRNTRVF*RRLSLM
Trigger: CATCAAGGAGAGCCGGCGCCAGAAGACACGTGTGTT...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp CACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCGCGTTTAGCAACTGTTaGATCAGGGGAATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HDVPVHQLKGVNEQLHPVAFSNC*IRGMVL
Trigger: CAGGACCATTCCCCTGATCCAACAGTTGCTAAACGC...GACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR TCA 90 bp ACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCAGTTCTTCTCCAGTGTaGAGTTGGTGTACCCAATGC +
Preference number: 4 (lower is better)
Translates to: TMSLCTSLKVSMNSSIQSSSSPV*SWCTQC
Trigger: GCATTGGGTACACCAACTTCACACTGGAGAAGAACT...GGACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR GCA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAAAGGAGCTGATGCCCTaGAGGTTCTTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: FNDQGSYKESGHRKTEERKELMP*RFLMKE
Trigger: CTCCTTCATCAAGAACCTGCAGGGCATCAGCTCCTT...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACAGAACAGCGTCATGTTaGGCACCTGCTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDRTASC*APAVAC
Trigger: ACAAGCCACAGCAGGTGCGCAACATGACGCTGTTCT...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR GCA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAAGAACAGCGTCATGTTaGGCACCTGCTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRRTASC*APAVAC
Trigger: ACAAGCCACAGCAGGTGCGCAACATGACGCTGTTCT...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGAGTCGGGCAGCATGGTaGCGTAGTCGTTGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: VILDLGWALNSMTRVLIKSRAAW*RSRCGR
Trigger: TCTACCGCAACGACTACGCCACCATGCTGCCCGACT...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAACGGTTGATGGTGTCCTaGTCGATCTCGGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKRLMVS*SISVES
Trigger: CGACTCCACCGAGATCGACCAGGACACCATCAACCG...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGCACCCATGTTGCCCTTaGCACCCTTCTGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: VILDLGWALNSMTRVLIKHPCCP*HPSVHG
Trigger: ACCGTGGACAGAAGGGTGCCAAGGGCAACATGGGTG...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAACTCTCGTGCTTCTCGTaGAACATGTCCCCGATGCCG +
Preference number: 4 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKLSCFS*NMSPMP
Trigger: CGGCATCGGGGACATGTTCCACGAGAAGCACGAGAG...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTGCGTTTAGCAACTGTTaGATCAGGGGAATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CEVILDLGWALNSMTRVLAFSNC*IRGMVL
Trigger: CAGGACCATTCCCCTGATCCAACAGTTGCTAAACGC...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGGCTCCACTGTTGCCTTaGTACCCCTTGCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: VILDLGWALNSMTRVLIKAPLLP*YPLLPL
Trigger: CAAGGGAAGCAAGGGGTATCAAGGCAACAGTGGAGC...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACGCAGTCGGTCTTCTCTaGGCAGTTGTTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDAVGLL*AVVVSL
Trigger: GAGAGAAACAACAACTGCCCAGAGAAGACCGACTGC...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGAGCACGAAGTACACGTaGATGGGGCAGTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VILDLGWALNSMTRVLIKSTKYT*MGQSVF
Trigger: GAAGACCGACTGCCCCATCCACGTGTACTTCGTGCT...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGAGACGGAGGAGAGACTaGAAGATGCAGCCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VILDLGWALNSMTRVLIKRRRRD*KMQPQQ
Trigger: TTGCTGCGGCTGCATCTTCCAGTCTCTCCTCCGTCT...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACATTCTGGACTTGGGGTaGGCCTTAAATTCAATGACC +
Preference number: 4 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDILDLG*ALNSMT
Trigger: GGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAAT...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR TCA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAACCTCCATGTCATCGATaGACTTCTCAGCGACCAGGT +
Preference number: 4 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKPPCHR*TSQRPG
Trigger: ACCTGGTCGCTGAGAAGTTCATCGATGACATGGAGG...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CCA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTATTCTGGACTTGGGGTaGGCCTTAAATTCAATGACC +
Preference number: 4 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSILDLG*ALNSMT
Trigger: GGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAAT...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS GCA 90 bp GCCACGGCGAAGAGCCGGATGCCCTCCTCGCGGGCCCGCTCGGCCTaGAGCTTGATGCCCCCGCAGGGGCTGCCGGTGACGTGGCCGTCG +
Preference number: 5 (lower is better)
Translates to: ATAKSRMPSSRARSA*SLMPPQGLPVTWPS
Trigger: CGACGGCCACGTCACCGGCAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGCGGGCCCGCGAGGAGGGCATCCGGCTCTTCGCCGTGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 90 bp TGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTaGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCGCTAGC +
Preference number: 5 (lower is better)
Translates to: CWPCGTRARLAPWTG*AHDPRLRGPGGGAS
Trigger: GCTAGCGCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCGTCCTGGGACTCCTCTaGGCCCCCGAGGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGVLGLL*APEGLA
Trigger: AGCCAGGCCCTCGGGGGCCAAGAGGAGTCCCAGGAC...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 90 bp GGCGTCCTAGGCGCGGGCACCGGGGTTCTGCTGGCACAGCCCGGATaGGCGCCGCTCGCCCGCACACCTGCGGCTCCACAGAGGGCCGAT +
Preference number: 5 (lower is better)
Translates to: GVLGAGTGVLLAQPG*APLARTPAAPQRAD
Trigger: ATCGGCCCTCTGTGGAGCCGCAGGTGTGCGGGCGAGCGGCGCCCATCCGGGCTGTGCCAGCAGAACCCCGGTGCCCGCGCCTAGGACGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS-3UTR CAA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCAGCGCCACGCGTGCGTaGAGAGGGTCGTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGSATRA*RGSSSL
Trigger: GAGGGACGACGACCCTCTCAACGCACGCGTGGCGCT...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCGCTCGGCCTGCAGCTaGATGCCCCCGCAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RCWPCGTRARLAPWTGWARSACS*MPPQGL
Trigger: CAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGCG...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp CACCTGCTGCTCGCCGGGGCCACCAAACTGCAGCAGCGCCACGCGTaGGTTGAGAGGGTCGTCGTCCCTCCGGGCCAGCGTCAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: HLLLAGATKLQQRHA*VERVVVPPGQRQPP
Trigger: CGGCGGCTGACGCTGGCCCGGAGGGACGACGACCCTCTCAACGCACGCGTGGCGCTGCTGCAGTTTGGTGGCCCCGGCGAGCAGCAGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCCCCGGCTCACCCATGTaGCCCTTGGCACCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGPGSPM*PLAPFC
Trigger: ACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCGGG...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCCCGATGCGCCCCAGCTaGCCCTTCTGTCCATCGGTC +
Preference number: 5 (lower is better)
Translates to: PGRRPSEQRCWPCGTRARPMRPS*PFCPSV
Trigger: GACCGATGGACAGAAGGGCAAGCTGGGGCGCATCGG...GCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGGTCCCCCTTGCCGCCTaGGTCTCCTCGCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: PGPLSTMDGVGSRPSTAGVPLAA*VSSLPW
Trigger: CCAGGGGAGCGAGGAGACCAAGGCGGCAAGGGGGAC...CCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGGCCAGGGTCCCCCTaGCCGCCTTGGTCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSRPGSP*PPWSPR
Trigger: GCGAGGAGACCAAGGCGGCAAGGGGGACCCTGGCCG...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp CTCGCCCGCACACCTGCGGCTCCACAGAGGGCCGATCCGTTCGGTTaGCAGCAGTGGAGACCCAGGCCCAGCGGTTCCACCAGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: LARTPAAPQRADPFG*QQWRPRPSGSTSAP
Trigger: CGGGGCGCTGGTGGAACCGCTGGGCCTGGGTCTCCACTGCTGGCAACCGAACGGATCGGCCCTCTGTGGAGCCGCAGGTGTGCGGGCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS CCA 90 bp TGCGGCGTGCTGGCGATGTCCCGCAGGCCCTGCTCCTTCAGGTTCTaGTTGGGGGCCACGGCGAAGAGCCGGATGCCCTCCTCGCGGGCC +
Preference number: 5 (lower is better)
Translates to: CGVLAMSRRPCSFRF*LGATAKSRMPSSRA
Trigger: GGCCCGCGAGGAGGGCATCCGGCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGGAGCAGGGCCTGCGGGACATCGCCAGCACGCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp CCGGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACGCTCGGCCTGCAGCTaGATGCCCCCGCAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PGARRQATVHLQGSVQRRRSACS*MPPQGL
Trigger: CAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGCG...TCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCACCATCGGTCCCGTTCTaGCCAGCCAGGCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPPSVPF*PARPGA
Trigger: GGCCCCTGGCCTGGCTGGCAAGAACGGGACCGATGG...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCACGAAGCGCCGGGCCTaGTGGAAGTTCTGCTCACCC +
Preference number: 5 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRATKRRA*WKFCSP
Trigger: GGGTGAGCAGAACTTCCACAAGGCCCGGCGCTTCGT...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS TCA 90 bp CTGCGTGCCTCCGGGCCCCGCCACGCGGGCTGCGCACGATGGCATTaGTGGCGTGCACCACGCCTGCGCCCACGTGCGAGAAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: LRASGPRHAGCARWH*WRAPRLRPRARRSS
Trigger: TGAACTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAGCCCGCGTGGCGGGGCCCGGAGGCACGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp TGGCTCAGCGGGAAGGCCACCTGCTGCTCGCCGGGGCCACCAAACTaGAGCAGCGCCACGCGTGCGTTGAGAGGGTCGTCGTCCCTCCGG +
Preference number: 5 (lower is better)
Translates to: WLSGKATCCSPGPPN*SSATRALRGSSSLR
Trigger: CCGGAGGGACGACGACCCTCTCAACGCACGCGTGGCGCTGCTGCAGTTTGGTGGCCCCGGCGAGCAGCAGGTGGCCTTCCCGCTGAGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp GCCTCGTGGATGGCCGTGAGGTTGTGGCTCAGCGGGAAGGCCACCTaGTGCTCGCCGGGGCCACCAAACTGCAGCAGCGCCACGCGTGCG +
Preference number: 5 (lower is better)
Translates to: ASWMAVRLWLSGKAT*CSPGPPNCSSATRA
Trigger: CGCACGCGTGGCGCTGCTGCAGTTTGGTGGCCCCGGCGAGCAGCAGGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCATCCACGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp GGTTCTGCTGGCACAGCCCGGATGGGCGCCGCTCGCCCGCACACCTaGGGCTCCACAGAGGGCCGATCCGTTCGGTTGCCAGCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: GSAGTARMGAARPHT*GSTEGRSVRLPAVE
Trigger: CTCCACTGCTGGCAACCGAACGGATCGGCCCTCTGTGGAGCCGCAGGTGTGCGGGCGAGCGGCGCCCATCCGGGCTGTGCCAGCAGAACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS GCA 90 bp CCAGCCTGGAGGCGCCAGGAGTCGGCAGCCTGGCGCGGTCATCTCTaGTGGGTCAGCTGCCGGCCAGCACTGGCAGGAAGGGAAGCGCCA +
Preference number: 5 (lower is better)
Translates to: PAWRRQESAAWRGHL*WVSCRPALAGREAP
Trigger: TGGCGCTTCCCTTCCTGCCAGTGCTGGCCGGCAGCTGACCCAGCAGAGATGACCGCGCCAGGCTGCCGACTCCTGGCGCCTCCAGGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460886.1
CDS CCA 90 bp CGCTCGGCCTGCAGCTTGATGCCCCCGCAGGGGCTGCCGGTGACGTaGCCGTCGGTGATGACCACGGCGAAGTGGACGGTGCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RSACSLMPPQGLPVT*PSVMTTAKWTVPLL
Trigger: CAGCAAGGGCACCGTCCACTTCGCCGTGGTCATCACCGACGGCCACGTCACCGGCAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CCA 90 bp ACACCTGCGGCTCCACAGAGGGCCGATCCGTTCGGTTGCCAGCAGTaGAGACCCAGGCCCAGCGGTTCCACCAGCGCCCCGGCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: TPAAPQRADPFGCQQ*RPRPSGSTSAPAES
Trigger: GGACTCCGCCGGGGCGCTGGTGGAACCGCTGGGCCTGGGTCTCCACTGCTGGCAACCGAACGGATCGGCCCTCTGTGGAGCCGCAGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS CCA 90 bp GCCTGGAGGCGCCAGGAGTCGGCAGCCTGGCGCGGTCATCTCTGCTaGGTCAGCTGCCGGCCAGCACTGGCAGGAAGGGAAGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: AWRRQESAAWRGHLC*VSCRPALAGREAPL
Trigger: GAGTGGCGCTTCCCTTCCTGCCAGTGCTGGCCGGCAGCTGACCCAGCAGAGATGACCGCGCCAGGCTGCCGACTCCTGGCGCCTCCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460886.1
CDS-3UTR CAA 90 bp CGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCAAGGCCAGGGGCCCCCTaGCGACCGTCGGCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: RRPSEQRCWPCGTRARLARPGAP*RPSAPN
Trigger: ATTTGGAGCCGACGGTCGCAAGGGGGCCCCTGGCCT...TGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTCCATCGGTCCCGTTCTaGCCAGCCAGGCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: DCKACGGRRPRAPPRAAAPSVPF*PARPGA
Trigger: GGCCCCTGGCCTGGCTGGCAAGAACGGGACCGATGG...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGTACCCCTTGCTTCCCTaGGCCCCGATTTCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: AGPGRRPSEQRCWPCGTRYPLLP*APISPG
Trigger: CCCGGGAGAAATCGGGGCCAAGGGAAGCAAGGGGTA...CCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCAAGCCTCGGTCTCCCTaGGCTCCTTTGTTGCCAACC +
Preference number: 5 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGKPRSP*APLLPT
Trigger: GGTTGGCAACAAAGGAGCCAAGGGAGACCGAGGCTT...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGGGTAGGTCAGGAGCCTaGGGATGGCTGCAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGGRSGA*GWLQGE
Trigger: CTCCCCCTGCAGCCATCCCAAGGCTCCTGACCTACC...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp GTCGTTGCCCGTGACGCCGTCCGTGAGGAACACGAAGGACAGCTCTaGGTGCCTCCGGGCCCCGCCACGCGGGCTGCGCACGATGGCATT +
Preference number: 5 (lower is better)
Translates to: VVARDAVREEHEGQL*VPPGPATRAAHDGI
Trigger: AATGCCATCGTGCGCAGCCCGCGTGGCGGGGCCCGGAGGCACGCAGAGCTGTCCTTCGTGTTCCTCACGGACGGCGTCACGGGCAACGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp CGCCAGGAGTCGGCAGCCTGGCGCGGTCATCTCTGCTGGGTCAGCTaGCGGCCAGCACTGGCAGGAAGGGAAGCGCCACTCACCTCTCCG +
Preference number: 5 (lower is better)
Translates to: RQESAAWRGHLCWVS*RPALAGREAPLTSP
Trigger: CGGAGAGGTGAGTGGCGCTTCCCTTCCTGCCAGTGCTGGCCGGCAGCTGACCCAGCAGAGATGACCGCGCCAGGCTGCCGACTCCTGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460886.1
CDS CCA 90 bp GGGCTCACCCTCGGGTCCTGGGACTCCTCTTGGCCCCCGAGGGCCTaGCTCACCAGGGGGACCAGGATCCGCAGGCTCTCCTTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: GLTLGSWDSSWPPRA*LTRGTRIRRLSFLS
Trigger: GGAGAGAAAGGAGAGCCTGCGGATCCTGGTCCCCCTGGTGAGCCAGGCCCTCGGGGGCCAAGAGGAGTCCCAGGACCCGAGGGTGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS-3UTR CAA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCAAAGTGGACGGTGCCCTaGCTGCGGTCCTGCCGGATC +
Preference number: 5 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPKWTVP*LRSCRI
Trigger: GATCCGGCAGGACCGCAGCAAGGGCACCGTCCACTT...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGTCCTTCAGGTTCTGGTaGGGGGCCACGGCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGSFRFW*GATAKS
Trigger: GCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGGA...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GCAGGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGTCACCCATGTTGCCCTaGGCACCCTTCTGTCCACGG +
Preference number: 5 (lower is better)
Translates to: AGPGRRPSEQRCWPCGTRSPMLP*APFCPR
Trigger: CCGTGGACAGAAGGGTGCCAAGGGCAACATGGGTGA...CCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GGCCCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCAAGCCAGGAACGCCCTaGGGTCCTGGGAATCCAATG +
Preference number: 5 (lower is better)
Translates to: GPGRRPSEQRCWPCGTRAKPGTP*GPGNPM
Trigger: CATTGGATTCCCAGGACCCAAGGGCGTTCCTGGCTT...GGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CCGGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGAAGGCCAGGGGCCCCCTaGCGACCGTCGGCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: PGARRQATVHLQGSVQRRRPGAP*RPSAPN
Trigger: ATTTGGAGCCGACGGTCGCAAGGGGGCCCCTGGCCT...TCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCCCATCGGTCCCGTTCTaGCCAGCCAGGCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGPSVPF*PARPGA
Trigger: GGCCCCTGGCCTGGCTGGCAAGAACGGGACCGATGG...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp CAGGAAGCTGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCGGCCAGGGTCCCCCTaGCCGCCTTGGTCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: QEAGRELGDPHGGTFGGHRPGSP*PPWSPR
Trigger: GCGAGGAGACCAAGGCGGCAAGGGGGACCCTGGCCG...GTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCAGCTTCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp CGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACACAGCGCCCGCAAGTaGAGGTCATCGTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: RRPSEQRCWPCGTRARLAHSARK*RSSSRG
Trigger: CCCTCGGGACGATGACCTCAACTTGCGGGCGCTGTG...TGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp TGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCACGGACCCGCACGGTGGCACCTTaGGGGGACACCACGGACCCC +
Preference number: 5 (lower is better)
Translates to: WQGARRPARWHLWGTPRTRTVAP*GDTTDP
Trigger: GGGGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCG...GGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTGTGTGTGGCTCGGCCTaGGCAGGAGGCGTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: GGSPPGHGASARERPEKTVCGSA*AGGVGA
Trigger: TGCCCCCACGCCTCCTGCCAAGGCCGAGCCACACAC...AGTCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp CCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCTGCGCACGATGGCATaGATGGCGTGCACCACGCCT +
Preference number: 5 (lower is better)
Translates to: PGPLSTMDGVGSRPSTAGLRTMA*MACTTP
Trigger: AGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAG...CCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATCGTGCAGACTGTCGTaGCCCGTGACGCCGTCCGTG +
Preference number: 5 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPSCRLS*PVTPSV
Trigger: CACGGACGGCGTCACGGGCAACGACAGTCTGCACGA...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGGGTACCACGTTCTGCTaGCGCATGGAGTGCGCCGAC +
Preference number: 5 (lower is better)
Translates to: EQRCWPCGTRARLAPWTGGTTFC*RMECAD
Trigger: GTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACC...CCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp ACCACGGCGAAGTGGACGGTGCCCTTGCTGCGGTCCTGCCGGATCTaGTCCGTCATGTTGGCCAGCGCGCAGTCGGTGAAGGTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: TTAKWTVPLLRSCRI*SVMLASAQSVKVPR
Trigger: CCGCGGCACCTTCACCGACTGCGCGCTGGCCAACATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACTTCGCCGTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CCA 90 bp CAGGGGCTGCCGGTGACGTGGCCGTCGGTGATGACCACGGCGAAGTaGACGGTGCCCTTGCTGCGGTCCTGCCGGATCTGCTCCGTCATG +
Preference number: 5 (lower is better)
Translates to: QGLPVTWPSVMTTAK*TVPLLRSCRICSVM
Trigger: CATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACTTCGCCGTGGTCATCACCGACGGCCACGTCACCGGCAGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS-3UTR CAA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGTGCCCTGGAGCATCTaGGCAGCACCTGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTVPWSI*AAPVAL
Trigger: CAGGGCCACAGGTGCTGCCAAGATGCTCCAGGGCAC...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTATGCCCTGCAGGTTCTaGATGAAGGAGGCCCGGTCG +
Preference number: 5 (lower is better)
Translates to: RCWPCGTRARLAPWTGWAMPCRF*MKEARS
Trigger: CGACCGGGCCTCCTTCATCAAGAACCTGCAGGGCAT...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGCGGCGGCACCTTGATGATGCGGTaGATGGTGTCCTGGTCGATC +
Preference number: 5 (lower is better)
Translates to: APWTGWAHDPRLRGPGGGTLMMR*MVSWSI
Trigger: GATCGACCAGGACACCATCAACCGCATCATCAAGGT...GCCGCCGCCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CCAGGGCGTCGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCGGCTCCACTGTTGCCTaGATACCCCTTGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: PGRRPSEQRCWPCGTRARGSTVA*IPLASL
Trigger: AAGGGAAGCAAGGGGTATCAAGGCAACAGTGGAGCC...GCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACGACGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGGTCCCTGTCTCGGACTaGGGGTCCTTAGCGATGGCA +
Preference number: 5 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGVPVSD*GSLAMA
Trigger: TGCCATCGCTAAGGACCCCAAGTCCGAGACAGGGAC...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGGGTGTGTGGCTCGGCCTaGGCAGGAGGCGTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: ELLLGQPLSEARVKSGIWVCGSA*AGGVGA
Trigger: TGCCCCCACGCCTCCTGCCAAGGCCGAGCCACACAC...CCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGGACAGCTCTGTTaGGCAGGGAAGGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RCWPCGTRARLAPWTGWAHGQLC*AGKVWA
Trigger: TGCCCAGACCTTCCCTGCCAAACAGAGCTGTCCGTG...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCGTCGAAGAAGCCGGGTaGCGCCAGGCTGTCATAGTC +
Preference number: 5 (lower is better)
Translates to: RARLAPWTGWAHDPRLRGVEEAG*RQAVIV
Trigger: GACTATGACAGCCTGGCGCAACCCGGCTTCTTCGAC...GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp CCTGGTCGATCTCGGTGGAGTCGGGCAGCATGGTGGCGTAGTCGTTaGGGTAGAGCTCGTGCGGCGTGCTGGCGATGTCCCGCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: PGRSRWSRAAWWRSR*GRARAACWRCPAGP
Trigger: AGGGCCTGCGGGACATCGCCAGCACGCCGCACGAGCTCTACCGCAACGACTACGCCACCATGCTGCCCGACTCCACCGAGATCGACCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000460886.1
CDS GCA 90 bp CTCCGGGCCCCGCCACGCGGGCTGCGCACGATGGCATTGATGGCGTaGACCACGCCTGCGCCCACGTGCGAGAAGGAGTTCAGGTATTGT +
Preference number: 5 (lower is better)
Translates to: LRAPPRGLRTMALMA*TTPAPTCEKEFRYC
Trigger: ACAATACCTGAACTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAGCCCGCGTGGCGGGGCCCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTATCTGCTCCGTCATGTaGGCCAGCGCGCAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTICSVM*ASAQSV
Trigger: CACCGACTGCGCGCTGGCCAACATGACGGAGCAGAT...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGCGCTCGGCCTGCAGCTaGATGCCCCCGCAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DCSPADPDSRSLASTESQRSACS*MPPQGL
Trigger: CAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGCG...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTTCCTTCAGGTTCTGGTaGGGGGCCACGGCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: DCKACGGRRPRAPPRAAASFRFW*GATAKS
Trigger: GCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGGA...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCATTTCCAGGGTCTCCCTaGCAGCCAGGAGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: VLAVWDPGPLSTMDGVGSFPGSP*QPGGPM
Trigger: CATCGGACCTCCTGGCTGCAAGGGAGACCCTGGAAA...TGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTCGGCCAGGGTCCCCCTaGCCGCCTTGGTCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: PWKDCSPADPDSRSLASTRPGSP*PPWSPR
Trigger: GCGAGGAGACCAAGGCGGCAAGGGGGACCCTGGCCG...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTTCTCCCTTGGCTCCTTaGTTGCCAACCTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RCWPCGTRARLAPWTGWASPLAP*LPTSPA
Trigger: GGCTGGAGAGGTTGGCAACAAAGGAGCCAAGGGAGA...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp CCCAAGGCCAGCACGGTGGGTACCACGTTCTGCTTGCGCATGGAGTaGGCCGACTCGTGCAGACTGTCGTTGCCCGTGACGCCGTCCGTG +
Preference number: 5 (lower is better)
Translates to: PKASTVGTTFCLRME*ADSCRLSLPVTPSV
Trigger: CACGGACGGCGTCACGGGCAACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGTGCTGGCCTTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCATTTGGAAGTGGACGGTGCCCTaGCTGCGGTCCTGCCGGATC +
Preference number: 5 (lower is better)
Translates to: ELLLGQPLSEARVKSGIWKWTVP*LRSCRI
Trigger: GATCCGGCAGGACCGCAGCAAGGGCACCGTCCACTT...CCAAATGCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TACCCCGGTGGCGAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGTCACCCATGTTGCCCTaGGCACCCTTCTGTCCACGG +
Preference number: 5 (lower is better)
Translates to: YPGGELGPLGGVDQHGHQSPMLP*APFCPR
Trigger: CCGTGGACAGAAGGGTGCCAAGGGCAACATGGGTGA...CTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTCGCCACCGGGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGAGGCCAGGGGCCCCCTaGCGACCGTCGGCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: EDAAAARDTVATSMGRGWRPGAP*RPSAPN
Trigger: ATTTGGAGCCGACGGTCGCAAGGGGGCCCCTGGCCT...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTCCATCGGTCCCGTTCTaGCCAGCCAGGCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: PWKDCSPADPDSRSLASTPSVPF*PARPGA
Trigger: GGCCCCTGGCCTGGCTGGCAAGAACGGGACCGATGG...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGTCCCCCTTGCCGCCTaGGTCTCCTCGCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: SARERPEKTVRPAVGVGLVPLAA*VSSLPW
Trigger: CCAGGGGAGCGAGGAGACCAAGGCGGCAAGGGGGAC...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGTCCTGGGACTCCTCTaGGCCCCCGAGGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PWKDCSPADPDSRSLASTVLGLL*APEGLA
Trigger: AGCCAGGCCCTCGGGGGCCAAGAGGAGTCCCAGGAC...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGATGGCACCCAGCCTGTaGACCACGTTGATGACGAAG +
Preference number: 5 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGMAPSL*TTLMTK
Trigger: CTTCGTCATCAACGTGGTCAACAGGCTGGGTGCCAT...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTTTCTTGACAGCCTCCTaGAAGCTCGACAGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: RCWPCGTRARLAPWTGWAFLTAS*KLDRES
Trigger: CGACTCCCTGTCGAGCTTCAAGGAGGCTGTCAAGAA...AGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CGTCCGAGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCAGAGAACAGCGTCATGTaGCGCACCTGCTGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: RPSEQRCWPCGTRARLAPENSVM*RTCCGL
Trigger: CAAGCCACAGCAGGTGCGCAACATGACGCTGTTCTC...TGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACTCGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS TCA 90 bp AGGAGTTCAGGTATTGTGTGGTCTCCAGCGCCTCGTGGATGGCCGTaGGGTTGTGGCTCAGCGGGAAGGCCACCTGCTGCTCGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: RSSGIVWSPAPRGWP*GCGSAGRPPAARRG
Trigger: GCCCCGGCGAGCAGCAGGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCATCCACGAGGCGCTGGAGACCACACAATACCTGAACTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp TCGGTGATGACCACGGCGAAGTGGACGGTGCCCTTGCTGCGGTCCTaGCGGATCTGCTCCGTCATGTTGGCCAGCGCGCAGTCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SVMTTAKWTVPLLRS*RICSVMLASAQSVK
Trigger: CTTCACCGACTGCGCGCTGGCCAACATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACTTCGCCGTGGTCATCACCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CCA 90 bp ATGGCCCCCAGGATTCCCCAGAGCAGGAGCACGGAGCAGGTGCCCTaGAGCATCTTGGCAGCACCTGTGGCCCTGAAGTCCTGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: MAPRIPQSRSTEQVP*SILAAPVALKSWSR
Trigger: TCGGGACCAGGACTTCAGGGCCACAGGTGCTGCCAAGATGCTCCAGGGCACCTGCTCCGTGCTCCTGCTCTGGGGAATCCTGGGGGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300527.9
ENST00000310645.9
CDS CCA 90 bp CGGTCGCACAGCGCCCGCAAGTTGAGGTCATCGTCCCGAGGGTCGTaGCGCCCGTCCGTGATGACCACCGCAAACACACGTGTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RSHSARKLRSSSRGS*RPSVMTTANTRVFW
Trigger: CCAGAAGACACGTGTGTTTGCGGTGGTCATCACGGACGGGCGCCACGACCCTCGGGACGATGACCTCAACTTGCGGGCGCTGTGCGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 90 bp AGGTATTGTGTGGTCTCCAGCGCCTCGTGGATGGCCGTGAGGTTGTaGCTCAGCGGGAAGGCCACCTGCTGCTCGCCGGGGCCACCAAAC +
Preference number: 5 (lower is better)
Translates to: RYCVVSSASWMAVRL*LSGKATCCSPGPPN
Trigger: GTTTGGTGGCCCCGGCGAGCAGCAGGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCATCCACGAGGCGCTGGAGACCACACAATACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 90 bp CAGCCTGGCGCGGTCATCTCTGCTGGGTCAGCTGCCGGCCAGCACTaGCAGGAAGGGAAGCGCCACTCACCTCTCCGTAGGCTTCGTGTT +
Preference number: 5 (lower is better)
Translates to: QPGAVISAGSAAGQH*QEGKRHSPLRRLRV
Trigger: AACACGAAGCCTACGGAGAGGTGAGTGGCGCTTCCCTTCCTGCCAGTGCTGGCCGGCAGCTGACCCAGCAGAGATGACCGCGCCAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460886.1
CDS-3UTR CAA 90 bp TGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCACGGACCATGCCCTGCAGGTTCTaGATGAAGGAGGCCCGGTCG +
Preference number: 5 (lower is better)
Translates to: WQGARRPARWHLWGTPRTMPCRF*MKEARS
Trigger: CGACCGGGCCTCCTTCATCAAGAACCTGCAGGGCAT...GGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTAGGCCAGGGGCCCCCTaGCGACCGTCGGCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEARPGAP*RPSAPN
Trigger: ATTTGGAGCCGACGGTCGCAAGGGGGCCCCTGGCCT...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGCCGATGCGCCCCAGCTaGCCCTTCTGTCCATCGGTC +
Preference number: 5 (lower is better)
Translates to: AGESVEEMQVERVCGSALPMRPS*PFCPSV
Trigger: GACCGATGGACAGAAGGGCAAGCTGGGGCGCATCGG...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTGGCCGATGCGCCCCAGCTaGCCCTTCTGTCCATCGGTC +
Preference number: 5 (lower is better)
Translates to: EDAAAARDTVATSMGRGWPMRPS*PFCPSV
Trigger: GACCGATGGACAGAAGGGCAAGCTGGGGCGCATCGG...CCAGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGCCTAGAGCTCCTCCTCGGGCAGCCGCTCAGCGAGGCCAGAGTGAAGAGCGGCAAGCCTCGGTCTCCCTaGGCTCCTTTGTTGCCAACC +
Preference number: 5 (lower is better)
Translates to: GLELLLGQPLSEARVKSGKPRSP*APLLPT
Trigger: GGTTGGCAACAAAGGAGCCAAGGGAGACCGAGGCTT...GCCGCTCTTCACTCTGGCCTCGCTGAGCGGCTGCCCGAGGAGGAGCTCTAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCTCGGGCAGCCGCTTCCGTCCAAACCTGTTaGGCAGGGAAGGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: DCKACGGRRPRAPPRAAASVQTC*AGKVWA
Trigger: TGCCCAGACCTTCCCTGCCAAACAGGTTTGGACGGA...AGCGGCTGCCCGAGGAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS GCA 90 bp GCCACGCGGGCTGCGCACGATGGCATTGATGGCGTGCACCACGCCTaGGCCCACGTGCGAGAAGGAGTTCAGGTATTGTGTGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ATRAAHDGIDGVHHA*AHVREGVQVLCGLQ
Trigger: CTGGAGACCACACAATACCTGAACTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAGCCCGCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp ATGTCCACGTCGCTGCCCAAGGCCAGCACGGTGGGTACCACGTTCTaGTTGCGCATGGAGTGCGCCGACTCGTGCAGACTGTCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: MSTSLPKASTVGTTF*LRMECADSCRLSLP
Trigger: GGGCAACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGTGCTGGCCTTGGGCAGCGACGTGGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 90 bp TTTCTCTCGGTAGTGTCCGGCGAGATGACCTCCTGCTGCTGGGCCTaGATGGCCCCCAGGATTCCCCAGAGCAGGAGCACGGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: FLSVVSGEMTSCCWA*MAPRIPQSRSTEQV
Trigger: CACCTGCTCCGTGCTCCTGCTCTGGGGAATCCTGGGGGCCATCCAGGCCCAGCAGCAGGAGGTCATCTCGCCGGACACTACCGAGAGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CCA 90 bp GATGCCCTGCAGGTTCTTGATGAAGGAGGCCCGGTCGCTGCCCGGTaGGCTGAACACCTCCACCTGGTCAGAGAAGTGCAGGCCGCCGTA +
Preference number: 5 (lower is better)
Translates to: DALQVLDEGGPVAAR*AEHLHLVREVQAAV
Trigger: TACGGCGGCCTGCACTTCTCTGACCAGGTGGAGGTGTTCAGCCCACCGGGCAGCGACCGGGCCTCCTTCATCAAGAACCTGCAGGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS-3UTR CAA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGTGCCCTGGAGCATCTaGGCAGCACCTGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWVPWSI*AAPVAL
Trigger: CAGGGCCACAGGTGCTGCCAAGATGCTCCAGGGCAC...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000397763.5
CDS-3UTR CAA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGTTCTCTGGGCAGTTGTaGTTTCTCTCGGTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGFSGQL*FLSVVS
Trigger: GGACACTACCGAGAGAAACAACAACTGCCCAGAGAA...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGTGTGGCTCGGCCTTGCCCGGCTCACCCATGTaGCCCTTGGCACCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: AGESVEEMQVERVCGSALPGSPM*PLAPFC
Trigger: ACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCGGG...CAAGGCCGAGCCACACACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCCCCGGCTCACCCATGTaGCCCTTGGCACCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: ERPEKTVRPAVGVGLELLPGSPM*PLAPFC
Trigger: ACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCGGG...GAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GAACTTGGCCCGCTCGGCGGTGTAGACCAGCACGGCCACCAGCTGGGAGTAGGCAAGCCAGGAACGCCCTaGGGTCCTGGGAATCCAATG +
Preference number: 5 (lower is better)
Translates to: ELGPLGGVDQHGHQLGVGKPGTP*GPGNPM
Trigger: CATTGGATTCCCAGGACCCAAGGGCGTTCCTGGCTT...GCCTACTCCCAGCTGGTGGCCGTGCTGGTCTACACCGCCGAGCGGGCCAAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTTCACCCTTCTCTCCTTaGAAGCCAGGAACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTSPFSP*KPGTPL
Trigger: CAAGGGCGTTCCTGGCTTCAAAGGAGAGAAGGGTGA...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp GCCAGAGTGAAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGTCCCCCTTGCCGCCTaGGTCTCCTCGCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ARVKSGIWAGESVEEMQVVPLAA*VSSLPW
Trigger: CCAGGGGAGCGAGGAGACCAAGGCGGCAAGGGGGAC...CACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp CGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCTTCTCCAGTGTGAAGTaGGTGTACCCAATGCTCTCG +
Preference number: 5 (lower is better)
Translates to: RARLAPWTGWAHDPRLRGFSSVK*VYPMLS
Trigger: CGAGAGCATTGGGTACACCAACTTCACACTGGAGAA...GCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp CCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGCGGGGCCCGGGAGCCTGTTGACCACGTaGATGACGAAGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PLSTMDGVGSRPSTAGPGSLLTT*MTKFFS
Trigger: GGAGAAGAACTTCGTCATCAACGTGGTCAACAGGCT...CCCGGGCCCCGCAGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGCACAGCGCCCGCAAGTaGAGGTCATCGTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWHSARK*RSSSRG
Trigger: CCCTCGGGACGATGACCTCAACTTGCGGGCGCTGTG...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS GCA 90 bp TCGTCGTCCAGCTGGATGGCCTCAAAGGTGCCCTCGTGGCTGTACTaGACCACGCCCACACGCGTCCCTGTCTCGGACTTGGGGTCCTTA +
Preference number: 5 (lower is better)
Translates to: SSSSWMASKVPSWLY*TTPTRVPVSDLGSL
Trigger: TAAGGACCCCAAGTCCGAGACAGGGACGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS GCA 90 bp CTGCGCACGATGGCATTGATGGCGTGCACCACGCCTGCGCCCACGTaGGAGAAGGAGTTCAGGTATTGTGTGGTCTCCAGCGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: LRTMALMACTTPAPT*EKEFRYCVVSSASW
Trigger: CCACGAGGCGCTGGAGACCACACAATACCTGAACTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp ACGGTGGGTACCACGTTCTGCTTGCGCATGGAGTGCGCCGACTCGTaGAGACTGTCGTTGCCCGTGACGCCGTCCGTGAGGAACACGAAG +
Preference number: 5 (lower is better)
Translates to: TVGTTFCLRMECADS*RLSLPVTPSVRNTK
Trigger: CTTCGTGTTCCTCACGGACGGCGTCACGGGCAACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 90 bp ATGGCCCCCAGGATTCCCCAGAGCAGGAGCACGGAGCAGGTGCCCTaGAGCATCTTGGCAGCACCTGTGGCCCTGAAGTCCAGAGTCGAA +
Preference number: 5 (lower is better)
Translates to: MAPRIPQSRSTEQVP*SILAAPVALKSRVE
Trigger: TTCGACTCTGGACTTCAGGGCCACAGGTGCTGCCAAGATGCTCCAGGGCACCTGCTCCGTGCTCCTGCTCTGGGGAATCCTGGGGGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS-3UTR CAA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGTCCTTCAGGTTCTGGTaGGGGGCCACGGCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWSFRFW*GATAKS
Trigger: GCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGGA...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATCCCGGCTCACCCATGTaGCCCTTGGCACCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHPGSPM*PLAPFC
Trigger: ACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCGGG...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGTACCCCTTGCTTCCCTaGGCCCCGATTTCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: DCSPADPDSRSLASTESQYPLLP*APISPG
Trigger: CCCGGGAGAAATCGGGGCCAAGGGAAGCAAGGGGTA...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGATCCACTCGAGGTTCTaGACAGCCTCCTTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTIHSRF*TASLKL
Trigger: GAGCTTCAAGGAGGCTGTCAAGAACCTCGAGTGGAT...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp TTTAGCAGAGGGCCAGCGCGGTCTCGGGGTCCCCCACGATGTCCCTGTGCACCAGAGAACAGCGTCATGTaGCGCACCTGCTGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: FSRGPARSRGPPRCPCAPENSVM*RTCCGL
Trigger: CAAGCCACAGCAGGTGCGCAACATGACGCTGTTCTC...TGGTGCACAGGGACATCGTGGGGGACCCCGAGACCGCGCTGGCCCTCTGCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TGGGACCCGGGCCCGCTTAGCACCATGGACGGGGTGGGCTCACGACCCTCGACTGGTTCAAAGCCTTTATaGGGTCAGGGCTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: WDPGPLSTMDGVGSRPSTGSKPL*GQGLLQ
Trigger: CTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACC...AGTCGAGGGTCGTGAGCCCACCCCGTCCATGGTGCTAAGCGGGCCCGGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 90 bp CAGTTGTTGTTTCTCTCGGTAGTGTCCGGCGAGATGACCTCCTGCTaGTGGGCCTGGATGGCCCCCAGGATTCCCCAGAGCAGGAGCACG +
Preference number: 5 (lower is better)
Translates to: QLLFLSVVSGEMTSC*WAWMAPRIPQSRST
Trigger: CGTGCTCCTGCTCTGGGGAATCCTGGGGGCCATCCAGGCCCAGCAGCAGGAGGTCATCTCGCCGGACACTACCGAGAGAAACAACAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS GCA 90 bp ACAGGGAGTCGATACGTTCGTCGTCCAGCTGGATGGCCTCAAAGGTaGCCTCGTGGCTGTACTGCACCACGCCCACACGCGTCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: TGSRYVRRPAGWPQR*PRGCTAPRPHASLS
Trigger: AGACAGGGACGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACGAACGTATCGACTCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS CCA 90 bp TTGTTGTTTCTCTCGGTAGTGTCCGGCGAGATGACCTCCTGCTGCTaGGCCTGGATGGCCCCCAGGATTCCCCAGAGCAGGAGCACGGAG +
Preference number: 5 (lower is better)
Translates to: LLFLSVVSGEMTSCC*AWMAPRIPQSRSTE
Trigger: CTCCGTGCTCCTGCTCTGGGGAATCCTGGGGGCCATCCAGGCCCAGCAGCAGGAGGTCATCTCGCCGGACACTACCGAGAGAAACAACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CCA 90 bp TCGATACGTTCGTCGTCCAGCTGGATGGCCTCAAAGGTGCCCTCGTaGCTGTACTGCACCACGCCCACACGCGTCCCTGTCTCGGACTTG +
Preference number: 5 (lower is better)
Translates to: SIRSSSSWMASKVPS*LYCTTPTRVPVSDL
Trigger: CAAGTCCGAGACAGGGACGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACGAACGTATCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS CCA 90 bp GCCTCCTTGAAGCTCGACAGGGAGTCGATACGTTCGTCGTCCAGCTaGATGGCCTCAAAGGTGCCCTCGTGGCTGTACTGCACCACGCCC +
Preference number: 5 (lower is better)
Translates to: ASLKLDRESIRSSSS*MASKVPSWLYCTTP
Trigger: GGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACGAACGTATCGACTCCCTGTCGAGCTTCAAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS CCA 90 bp ACGTGCGAGAAGGAGTTCAGGTATTGTGTGGTCTCCAGCGCCTCGTaGATGGCCGTGAGGTTGTGGCTCAGCGGGAAGGCCACCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TCEKEFRYCVVSSAS*MAVRLWLSGKATCC
Trigger: GCAGCAGGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCATCCACGAGGCGCTGGAGACCACACAATACCTGAACTCCTTCTCGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp AGTGAGCAGCGGTGCTGGCCGTGTGGGACCCGGGCCCGCTTAGCACCATGGACGGTCTTCTCTGGGCAGTaGTTGTTTCTCTCGGTAGTG +
Preference number: 5 (lower is better)
Translates to: SEQRCWPCGTRARLAPWTVFSGQ*LFLSVV
Trigger: CACTACCGAGAGAAACAACAACTGCCCAGAGAAGAC...CGTCCATGGTGCTAAGCGGGCCCGGGTCCCACACGGCCAGCACCGCTGCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTATGCCCTGCAGGTTCTaGATGAAGGAGGCCCGGTCG +
Preference number: 5 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEAMPCRF*MKEARS
Trigger: CGACCGGGCCTCCTTCATCAAGAACCTGCAGGGCAT...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTATCACCCATGTTGCCCTaGGCACCCTTCTGTCCACGG +
Preference number: 5 (lower is better)
Translates to: SARERPEKTVRPAVGVGLSPMLP*APFCPR
Trigger: CCGTGGACAGAAGGGTGCCAAGGGCAACATGGGTGA...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTTCACCCATGTTGCCCTaGGCACCCTTCTGTCCACGG +
Preference number: 5 (lower is better)
Translates to: PWKDCSPADPDSRSLASTSPMLP*APFCPR
Trigger: CCGTGGACAGAAGGGTGCCAAGGGCAACATGGGTGA...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATTTTCCAGGGTCTCCCTaGCAGCCAGGAGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHFPGSP*QPGGPM
Trigger: CATCGGACCTCCTGGCTGCAAGGGAGACCCTGGAAA...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGTCCCTGTCTCGGACTaGGGGTCCTTAGCGATGGCA +
Preference number: 5 (lower is better)
Translates to: PWKDCSPADPDSRSLASTVPVSD*GSLAMA
Trigger: TGCCATCGCTAAGGACCCCAAGTCCGAGACAGGGAC...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTATCCACTCGAGGTTCTaGACAGCCTCCTTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: GGSPPGHGASARERPEKTIHSRF*TASLKL
Trigger: GAGCTTCAAGGAGGCTGTCAAGAACCTCGAGTGGAT...AGTCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGCCACGGTGCATCTGTTaGGCAGGGAAGGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ETGRCSRSKGHGGHQHGKPRCIC*AGKVWA
Trigger: TGCCCAGACCTTCCCTGCCAAACAGATGCACCGTGG...CTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397763.5
CDS-3UTR CAA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCTCCTTCAGGTTCTGGTaGGGGGCCACGGCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVSFRFW*GATAKS
Trigger: GCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGGA...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GGGGGCTCGCCGCCAGGCCACGGTGCATCTGCAAGGGAGCGTCCAGAGAAGACTTTCTCCAGTGTGAAGTaGGTGTACCCAATGCTCTCG +
Preference number: 5 (lower is better)
Translates to: GGSPPGHGASARERPEKTFSSVK*VYPMLS
Trigger: CGAGAGCATTGGGTACACCAACTTCACACTGGAGAA...AGTCTTCTCTGGACGCTCCCTTGCAGATGCACCGTGGCCTGGCGGCGAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCACGGACCTTCTCCAGTGTGAAGTaGGTGTACCCAATGCTCTCG +
Preference number: 5 (lower is better)
Translates to: WQGARRPARWHLWGTPRTFSSVK*VYPMLS
Trigger: CGAGAGCATTGGGTACACCAACTTCACACTGGAGAA...GGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TGGCAGGGAGCTAGGAGACCCGCACGGTGGCACCTTTGGGGGACACCACGGACCAGCCTGTTGACCACGTaGATGACGAAGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: WQGARRPARWHLWGTPRTSLLTT*MTKFFS
Trigger: GGAGAAGAACTTCGTCATCAACGTGGTCAACAGGCT...GGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCGGGTCTCCTAGCTCCCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGGTCCCTGTCTCGGACTaGGGGTCCTTAGCGATGGCA +
Preference number: 5 (lower is better)
Translates to: KSGIWAGESVEEMQVERVVPVSD*GSLAMA
Trigger: TGCCATCGCTAAGGACCCCAAGTCCGAGACAGGGAC...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TCTGCAAGGGAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTATCACCCTTCTCTCCTTaGAAGCCAGGAACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: SARERPEKTVRPAVGVGLSPFSP*KPGTPL
Trigger: CAAGGGCGTTCCTGGCTTCAAAGGAGAGAAGGGTGA...TAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTCCCTTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTGAGAGCCAGTCACCCTTCTCTCCTTaGAAGCCAGGAACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: DCSPADPDSRSLASTESQSPFSP*KPGTPL
Trigger: CAAGGGCGTTCCTGGCTTCAAAGGAGAGAAGGGTGA...CTGGCTCTCAGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGTCACCCTTCTCTCCTTaGAAGCCAGGAACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: EERLEDAAAARDTVATSMSPFSP*KPGTPL
Trigger: CAAGGGCGTTCCTGGCTTCAAAGGAGAGAAGGGTGA...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGGCTCCACTGTTGCCTaGATACCCCTTGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWGSTVA*IPLASL
Trigger: AAGGGAAGCAAGGGGTATCAAGGCAACAGTGGAGCC...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGCTCCACTGTTGCCTaGATACCCCTTGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHGSTVA*IPLASL
Trigger: AAGGGAAGCAAGGGGTATCAAGGCAACAGTGGAGCC...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATTTCTTGACAGCCTCCTaGAAGCTCGACAGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHFLTAS*KLDRES
Trigger: CGACTCCCTGTCGAGCTTCAAGGAGGCTGTCAAGAA...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 90 bp TCGTTCTGCAGCTGGCTGATGAACTGCGGCACGAACTGCTTCATGTaGAAGAGCAGGATGTCCGTGGGGGACTGCATGGTGACGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SFCSWLMNCGTNCFM*KSRMSVGDCMVTLS
Trigger: GGAGAGCGTCACCATGCAGTCCCCCACGGACATCCTGCTCTTCCACATGAAGCAGTTCGTGCCGCAGTTCATCAGCCAGCTGCAGAACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CCA 90 bp GAGGAAGCAGAGACAGAAGGTTGCATGGGTGGGACATTCCTCAGGTaGCAGGGCAGGGTCTCAGAACGTGTAGCCCACGACTCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: EEAETEGCMGGTFLR*QGRVSERVAHDSQQ
Trigger: CTGCTGAGAGTCGTGGGCTACACGTTCTGAGACCCTGCCCTGCCACCTGAGGAATGTCCCACCCATGCAACCTTCTGTCTCTGCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485591.1
CDS-3UTR CAA 90 bp GAGCGTCCAGAGAAGACTGTAAGGCCTGCGGTGGGCGTCGGCCTAGAGCTCCTCTTCTCTGGGCAGTTGTaGTTTCTCTCGGTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: ERPEKTVRPAVGVGLELLFSGQL*FLSVVS
Trigger: GGACACTACCGAGAGAAACAACAACTGCCCAGAGAA...GAGGAGCTCTAGGCCGACGCCCACCGCAGGCCTTACAGTCTTCTCTGGACGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCCTGGGGAAGGTGGAAGCCTCGGTCTCCCTaGGCTCCTTTGTTGCCAACC +
Preference number: 5 (lower is better)
Translates to: APWRLATVGSGEWSWGRWKPRSP*APLLPT
Trigger: GGTTGGCAACAAAGGAGCCAAGGGAGACCGAGGCTT...CCACCTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GGGTCCTGCGTGAGCTCCGTGGCGTTTAGCAACTGTTGGATCAGGGGAATGGTCAGTGAAGAGCGGCATTaGGGCTGGCGAGTCGGTAGA +
Preference number: 5 (lower is better)
Translates to: GSCVSSVAFSNCWIRGMVSEERH*GWRVGR
Trigger: TCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACT...GACCATTCCCCTGATCCAACAGTTGCTAAACGCCACGGAGCTCACGCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS TCA 90 bp ACACGATCTGAGGGTCCGGGCAGAGGACGTCCTCCATGTCATCGATaGACTTCTCAGCGACCAGGTCGGAGAACAGCGTCATGTTGCGCA +
Preference number: 5 (lower is better)
Translates to: TRSEGPGRGRPPCHR*TSQRPGRRTASCCA
Trigger: TGCGCAACATGACGCTGTTCTCCGACCTGGTCGCTGAGAAGTTCATCGATGACATGGAGGACGTCCTCTGCCCGGACCCTCAGATCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 90 bp CTCAGCGACCAGGTCGGAGAACAGCGTCATGTTGCGCACCTGCTGTaGCTTGTCGCAGGCGATGGAGTAGAGGTTTTCACTCTCGTGCTT +
Preference number: 5 (lower is better)
Translates to: LSDQVGEQRHVAHLL*LVAGDGVEVFTLVL
Trigger: AAGCACGAGAGTGAAAACCTCTACTCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAACATGACGCTGTTCTCCGACCTGGTCGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGTCTTCTCTGGGCAGTaGTTGTTTCTCTCGGTAGTG +
Preference number: 5 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHVFSGQ*LFLSVV
Trigger: CACTACCGAGAGAAACAACAACTGCCCAGAGAAGAC...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAATCTGCTCCGTCATGTaGGCCAGCGCGCAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: DQGSYKESGHRKTEERLEICSVM*ASAQSV
Trigger: CACCGACTGCGCGCTGGCCAACATGACGGAGCAGAT...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACCCGATGCGCCCCAGCTaGCCCTTCTGTCCATCGGTC +
Preference number: 5 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDPMRPS*PFCPSV
Trigger: GACCGATGGACAGAAGGGCAAGCTGGGGCGCATCGG...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGTCCTGGGACTCCTCTaGGCCCCCGAGGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRVLGLL*APEGLA
Trigger: AGCCAGGCCCTCGGGGGCCAAGAGGAGTCCCAGGAC...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGTTCTCCAGTGTGAAGTaGGTGTACCCAATGCTCTCG +
Preference number: 5 (lower is better)
Translates to: EERLEDAAAARDTVATSMFSSVK*VYPMLS
Trigger: CGAGAGCATTGGGTACACCAACTTCACACTGGAGAA...CATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp AGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGAGCCTGTTGACCACGTaGATGACGAAGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRDWKMQPQQGTRWPPAWSLLTT*MTKFFS
Trigger: GGAGAAGAACTTCGTCATCAACGTGGTCAACAGGCT...CCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATGGGAAGAGGCTAGCCTGTTGACCACGTaGATGACGAAGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: WKMQPQQGTRWPPAWEEASLLTT*MTKFFS
Trigger: GGAGAAGAACTTCGTCATCAACGTGGTCAACAGGCT...AGCCTCTTCCCATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GCCAGAGTGAAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGTTCTTGACAGCCTCCTaGAAGCTCGACAGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ARVKSGIWAGESVEEMQVFLTAS*KLDRES
Trigger: CGACTCCCTGTCGAGCTTCAAGGAGGCTGTCAAGAA...CACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAGTGCCCTGGAGCATCTaGGCAGCACCTGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: FNDQGSYKESGHRKTEERVPWSI*AAPVAL
Trigger: CAGGGCCACAGGTGCTGCCAAGATGCTCCAGGGCAC...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000397763.5
CDS-3UTR CAA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGGTCTTCTCTGGGCAGTaGTTGTTTCTCTCGGTAGTG +
Preference number: 5 (lower is better)
Translates to: KSGIWAGESVEEMQVERVVFSGQ*LFLSVV
Trigger: CACTACCGAGAGAAACAACAACTGCCCAGAGAAGAC...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAACGCTCGGCCTGCAGCTaGATGCCCCCGCAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKRSACS*MPPQGL
Trigger: CAGCCCCTGCGGGGGCATCAAGCTGCAGGCCGAGCG...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp CCCTGGAAGGACTGTAGCCCCGCTGACCCCGATTCCAGATCTCTGGCCTCCACTTCGTGTTTCATGACCTaGATGATGCGGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: PWKDCSPADPDSRSLASTSCFMT*MMRLMV
Trigger: CACCATCAACCGCATCATCAAGGTCATGAAACACGA...AGTGGAGGCCAGAGATCTGGAATCGGGGTCAGCGGGGCTACAGTCCTTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGAGGAGAGACTGGAAGATGCAGCCGCAGCAAGGGACACGGTGGCCACCAGCATTCGTGTTTCATGACCTaGATGATGCGGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: GGETGRCSRSKGHGGHQHSCFMT*MMRLMV
Trigger: CACCATCAACCGCATCATCAAGGTCATGAAACACGA...ATGCTGGTGGCCACCGTGTCCCTTGCTGCGGCTGCATCTTCCAGTCTCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGCGGCCAGGGTCCCCCTaGCCGCCTTGGTCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: VILDLGWALNSMTRVLIKRPGSP*PPWSPR
Trigger: GCGAGGAGACCAAGGCGGCAAGGGGGACCCTGGCCG...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp AAGAGCGGCATTTGGGCTGGCGAGTCGGTAGAGGAAATGCAGGTGGAGCGGGTGGAGGTCATTCTGGACTaGGGGTGGGCCTTAAATTCA +
Preference number: 5 (lower is better)
Translates to: KSGIWAGESVEEMQVERVEVILD*GWALNS
Trigger: TGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTC...CACCCGCTCCACCTGCATTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTAGAAGGAGTTCAGGTATaGTGTGGTCTCCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVEGVQV*CGLQRL
Trigger: GAGGCGCTGGAGACCACACAATACCTGAACTCCTTC...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 90 bp AGAACAGCGTCATGTTGCGCACCTGCTGTGGCTTGTCGCAGGCGATaGAGTAGAGGTTTTCACTCTCGTGCTTCTCGTGGAACATGTCCC +
Preference number: 5 (lower is better)
Translates to: RTASCCAPAVACRRR*SRGFHSRASRGTCP
Trigger: GGGACATGTTCCACGAGAAGCACGAGAGTGAAAACCTCTACTCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAACATGACGCTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 90 bp CTTGTAGCACTGAAACGAGGAAGCAGAGACAGAAGGTTGCATGGGTaGGACATTCCTCAGGTGGCAGGGCAGGGTCTCAGAACGTGTAGC +
Preference number: 5 (lower is better)
Translates to: LVALKRGSRDRRLHG*DIPQVAGQGLRTCS
Trigger: GCTACACGTTCTGAGACCCTGCCCTGCCACCTGAGGAATGTCCCACCCATGCAACCTTCTGTCTCTGCTTCCTCGTTTCAGTGCTACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485591.1
CDS-3UTR CAA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACATGCCCTGCAGGTTCTaGATGAAGGAGGCCCGGTCG +
Preference number: 5 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDMPCRF*MKEARS
Trigger: CGACCGGGCCTCCTTCATCAAGAACCTGCAGGGCAT...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACAAGTGGACGGTGCCCTaGCTGCGGTCCTGCCGGATC +
Preference number: 5 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDKWTVP*LRSCRI
Trigger: GATCCGGCAGGACCGCAGCAAGGGCACCGTCCACTT...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp ACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCTTTCCAGGGTCTCCCTaGCAGCCAGGAGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: TMSLCTSLKVSMNSSIQSFPGSP*QPGGPM
Trigger: CATCGGACCTCCTGGCTGCAAGGGAGACCCTGGAAA...GGACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGGTCCCCCTTGCCGCCTaGGTCTCCTCGCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: VILDLGWALNSMTRVLIKVPLAA*VSSLPW
Trigger: CCAGGGGAGCGAGGAGACCAAGGCGGCAAGGGGGAC...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTTACCCCTTGCTTCCCTaGGCCCCGATTTCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: CEVILDLGWALNSMTRVLYPLLP*APISPG
Trigger: CCCGGGAGAAATCGGGGCCAAGGGAAGCAAGGGGTA...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGACACAGCGCCCGCAAGTaGAGGTCATCGTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRHSARK*RSSSRG
Trigger: CCCTCGGGACGATGACCTCAACTTGCGGGCGCTGTG...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGCGCACGGTGGCACCTTaGGGGGACACCACGGACCCC +
Preference number: 5 (lower is better)
Translates to: VILDLGWALNSMTRVLIKRTVAP*GDTTDP
Trigger: GGGGTCCGTGGTGTCCCCCAAAGGTGCCACCGTGCG...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACATCTGCTCCGTCATGTaGGCCAGCGCGCAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDICSVM*ASAQSV
Trigger: CACCGACTGCGCGCTGGCCAACATGACGGAGCAGAT...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTCTCCCTTGGCTCCTTaGTTGCCAACCTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDSPLAP*LPTSPA
Trigger: GGCTGGAGAGGTTGGCAACAAAGGAGCCAAGGGAGA...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACTGGAAATGGCACCCAGCCTGTaGACCACGTTGATGACGAAG +
Preference number: 5 (lower is better)
Translates to: DQGSYKESGHRKTEERLEMAPSL*TTLMTK
Trigger: CTTCGTCATCAACGTGGTCAACAGGCTGGGTGCCAT...TTCCAGTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTGTCCCTGTCTCGGACTaGGGGTCCTTAGCGATGGCA +
Preference number: 5 (lower is better)
Translates to: CEVILDLGWALNSMTRVLVPVSD*GSLAMA
Trigger: TGCCATCGCTAAGGACCCCAAGTCCGAGACAGGGAC...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACGAGAACAGCGTCATGTaGCGCACCTGCTGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDENSVM*RTCCGL
Trigger: CAAGCCACAGCAGGTGCGCAACATGACGCTGTTCTC...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGGTTCAAAGCCTTTATTGGGTCAGGGCTTGCTCCAGAGCTCAGGGGCCAGGTATCGTGTTTCATGACCTaGATGATGCGGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: GFKAFIGSGLAPELRGQVSCFMT*MMRLMV
Trigger: CACCATCAACCGCATCATCAAGGTCATGAAACACGA...TACCTGGCCCCTGAGCTCTGGAGCAAGCCCTGACCCAATAAAGGCTTTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS-3UTR CAA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACTTTCCAGGGTCTCCCTaGCAGCCAGGAGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDFPGSP*QPGGPM
Trigger: CATCGGACCTCCTGGCTGCAAGGGAGACCCTGGAAA...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGATCTCCCTTGGCTCCTTaGTTGCCAACCTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: FNDQGSYKESGHRKTEERSPLAP*LPTSPA
Trigger: GGCTGGAGAGGTTGGCAACAAAGGAGCCAAGGGAGA...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTTCTCCCTTGGCTCCTTaGTTGCCAACCTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: CEVILDLGWALNSMTRVLSPLAP*LPTSPA
Trigger: GGCTGGAGAGGTTGGCAACAAAGGAGCCAAGGGAGA...AAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAACACAGCGCCCGCAAGTaGAGGTCATCGTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKHSARK*RSSSRG
Trigger: CCCTCGGGACGATGACCTCAACTTGCGGGCGCTGTG...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAATCTGCTCCGTCATGTaGGCCAGCGCGCAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKICSVM*ASAQSV
Trigger: CACCGACTGCGCGCTGGCCAACATGACGGAGCAGAT...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGACACCTTGATGATGCGGTaGATGGTGTCCTGGTCGATC +
Preference number: 5 (lower is better)
Translates to: SMTRVLIKRAATGRRRRDTLMMR*MVSWSI
Trigger: GATCGACCAGGACACCATCAACCGCATCATCAAGGT...GTCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp ACGATGTCCCTGTGCACCAGCTTAAAGGTGTCAATGAACAGCTCCATCCAGTCCACCTTGATGATGCGGTaGATGGTGTCCTGGTCGATC +
Preference number: 5 (lower is better)
Translates to: TMSLCTSLKVSMNSSIQSTLMMR*MVSWSI
Trigger: GATCGACCAGGACACCATCAACCGCATCATCAAGGT...GGACTGGATGGAGCTGTTCATTGACACCTTTAAGCTGGTGCACAGGGACATCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAATACCCCTTGCTTCCCTaGGCCCCGATTTCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKYPLLP*APISPG
Trigger: CCCGGGAGAAATCGGGGCCAAGGGAAGCAAGGGGTA...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAGGCTCCACTGTTGCCTaGATACCCCTTGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: FNDQGSYKESGHRKTEERGSTVA*IPLASL
Trigger: AAGGGAAGCAAGGGGTATCAAGGCAACAGTGGAGCC...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTATGGCACCCAGCCTGTaGACCACGTTGATGACGAAG +
Preference number: 5 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSMAPSL*TTLMTK
Trigger: CTTCGTCATCAACGTGGTCAACAGGCTGGGTGCCAT...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACTCCGTCCAAACCTGTTaGGCAGGGAAGGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDSVQTC*AGKVWA
Trigger: TGCCCAGACCTTCCCTGCCAAACAGGTTTGGACGGA...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAAGTGAAGAGCGGCATTaGGGCTGGCGAGTCGGTAGA +
Preference number: 5 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRSEERH*GWRVGR
Trigger: TCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACT...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS-3UTR CAA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGAATCCACTCGAGGTTCTaGACAGCCTCCTTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: FNDQGSYKESGHRKTEERIHSRF*TASLKL
Trigger: GAGCTTCAAGGAGGCTGTCAAGAACCTCGAGTGGAT...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTATCCACTCGAGGTTCTaGACAGCCTCCTTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: LRGHSGLGVGLKFNDQGSIHSRF*TASLKL
Trigger: GAGCTTCAAGGAGGCTGTCAAGAACCTCGAGTGGAT...AGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp AATTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAACCTTGATGATGCGGTaGATGGTGTCCTGGTCGATC +
Preference number: 5 (lower is better)
Translates to: NSMTRVLIKRAATGRRRRTLMMR*MVSWSI
Trigger: GATCGACCAGGACACCATCAACCGCATCATCAAGGT...TCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGAAGCCAGGAACGCCCTaGGGTCCTGGGAATCCAATG +
Preference number: 5 (lower is better)
Translates to: VILDLGWALNSMTRVLIKKPGTP*GPGNPM
Trigger: CATTGGATTCCCAGGACCCAAGGGCGTTCCTGGCTT...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGAAGCCTCGGTCTCCCTaGGCTCCTTTGTTGCCAACC +
Preference number: 5 (lower is better)
Translates to: VILDLGWALNSMTRVLIKKPRSP*APLLPT
Trigger: GGTTGGCAACAAAGGAGCCAAGGGAGACCGAGGCTT...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGGAGAACAGCGTCATGTaGCGCACCTGCTGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: VILDLGWALNSMTRVLIKENSVM*RTCCGL
Trigger: CAAGCCACAGCAGGTGCGCAACATGACGCTGTTCTC...CTTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TTCAATGACCAGGGTTCTTATAAAGAGAGCGGCCACAGGAAGACGGAGGAGAGATCGTGTTTCATGACCTaGATGATGCGGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: FNDQGSYKESGHRKTEERSCFMT*MMRLMV
Trigger: CACCATCAACCGCATCATCAAGGTCATGAAACACGA...TCTCTCCTCCGTCTTCCTGTGGCCGCTCTCTTTATAAGAACCCTGGTCATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAATGGCACCCAGCCTGTaGACCACGTTGATGACGAAG +
Preference number: 5 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKMAPSL*TTLMTK
Trigger: CTTCGTCATCAACGTGGTCAACAGGCTGGGTGCCAT...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAATTCTTGACAGCCTCCTaGAAGCTCGACAGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKFLTAS*KLDRES
Trigger: CGACTCCCTGTCGAGCTTCAAGGAGGCTGTCAAGAA...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp TTAAGGGTCTTGCGAGGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACGAGGTCATTCTGGACTaGGGGTGGGCCTTAAATTCA +
Preference number: 5 (lower is better)
Translates to: LRVLRGHSGLGVGLKFNDEVILD*GWALNS
Trigger: TGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTC...GTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTCGCAAGACCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGTCTTCTCTGGGCAGTaGTTGTTTCTCTCGGTAGTG +
Preference number: 5 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKVFSGQ*LFLSVV
Trigger: CACTACCGAGAGAAACAACAACTGCCCAGAGAAGAC...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS-3UTR CAA 90 bp GGTCATTCTGGACTTGGGGTGGGCCTTAAATTCAATGACCAGGGTTCTTATAAAGAGGTCATTCTGGACTaGGGGTGGGCCTTAAATTCA +
Preference number: 5 (lower is better)
Translates to: GHSGLGVGLKFNDQGSYKEVILD*GWALNS
Trigger: TGAATTTAAGGCCCACCCCAAGTCCAGAATGACCTC...TTTATAAGAACCCTGGTCATTGAATTTAAGGCCCACCCCAAGTCCAGAATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 72 bp GGCGCGGGCACCGGGGTTCTGCTGGCACAGCCCGGATaGGCGCCGCTCGCCCGCACACCTGCGGCTCCACAG +
Preference number: 6 (lower is better)
Translates to: GAGTGVLLAQPG*APLARTPAAPQ
Trigger: CTGTGGAGCCGCAGGTGTGCGGGCGAGCGGCGCCCATCCGGGCTGTGCCAGCAGAACCCCGGTGCCCGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS CAA 72 bp CTCCGGGCCCCGCCACGCGGGCTGCGCACGATGGCATaGATGGCGTGCACCACGCCTGCGCCCACGTGCGAG +
Preference number: 6 (lower is better)
Translates to: LRAPPRGLRTMA*MACTTPAPTCE
Trigger: CTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAGCCCGCGTGGCGGGGCCCGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS TCA 72 bp TCCGGGCCCCGCCACGCGGGCTGCGCACGATGGCATTaGTGGCGTGCACCACGCCTGCGCCCACGTGCGAGA +
Preference number: 6 (lower is better)
Translates to: SGPRHAGCARWH*WRAPRLRPRAR
Trigger: TCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAGCCCGCGTGGCGGGGCCCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp CGTGACGCCGTCCGTGAGGAACACGAAGGACAGCTCTaGGTGCCTCCGGGCCCCGCCACGCGGGCTGCGCAC +
Preference number: 6 (lower is better)
Translates to: RDAVREEHEGQL*VPPGPATRAAH
Trigger: GTGCGCAGCCCGCGTGGCGGGGCCCGGAGGCACGCAGAGCTGTCCTTCGTGTTCCTCACGGACGGCGTCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp GGCACAGCCCGGATGGGCGCCGCTCGCCCGCACACCTaGGGCTCCACAGAGGGCCGATCCGTTCGGTTGCCA +
Preference number: 6 (lower is better)
Translates to: GTARMGAARPHT*GSTEGRSVRLP
Trigger: TGGCAACCGAACGGATCGGCCCTCTGTGGAGCCGCAGGTGTGCGGGCGAGCGGCGCCCATCCGGGCTGTGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS CAA 90 bp GCTCGCCCGCACACCTGCGGCTCCACAGAGGGCCGATCCGTTCGGTaGCCAGCAGTGGAGACCCAGGCCCAGCGGTTCCACCAGCGCCCC +
Preference number: 6 (lower is better)
Translates to: ARPHTCGSTEGRSVR*PAVETQAQRFHQRP
Trigger: GGGGCGCTGGTGGAACCGCTGGGCCTGGGTCTCCACTGCTGGCAACCGAACGGATCGGCCCTCTGTGGAGCCGCAGGTGTGCGGGCGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS TCA 72 bp CGGGGCCACCAAACTGCAGCAGCGCCACGCGTGCGTTaGGAGGGTCGTCGTCCCTCCGGGCCAGCGTCAGCC +
Preference number: 6 (lower is better)
Translates to: RGHQTAAAPRVR*EGRRPSGPASA
Trigger: GGCTGACGCTGGCCCGGAGGGACGACGACCCTCTCAACGCACGCGTGGCGCTGCTGCAGTTTGGTGGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp CTCGCCGGGGCCACCAAACTGCAGCAGCGCCACGCGTaGGTTGAGAGGGTCGTCGTCCCTCCGGGCCAGCGT +
Preference number: 6 (lower is better)
Translates to: LAGATKLQQRHA*VERVVVPPGQR
Trigger: ACGCTGGCCCGGAGGGACGACGACCCTCTCAACGCACGCGTGGCGCTGCTGCAGTTTGGTGGCCCCGGCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 72 bp CTCGGGTCCTGGGACTCCTCTTGGCCCCCGAGGGCCTaGCTCACCAGGGGGACCAGGATCCGCAGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LGSWDSSWPPRA*LTRGTRIRRLS
Trigger: GGAGAGCCTGCGGATCCTGGTCCCCCTGGTGAGCCAGGCCCTCGGGGGCCAAGAGGAGTCCCAGGACCCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS CAA 90 bp TCTGCGTGCCTCCGGGCCCCGCCACGCGGGCTGCGCACGATGGCATaGATGGCGTGCACCACGCCTGCGCCCACGTGCGAGAAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: SACLRAPPRGLRTMA*MACTTPAPTCEKEF
Trigger: GAACTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAGCCCGCGTGGCGGGGCCCGGAGGCACGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp GGGAAGGCCACCTGCTGCTCGCCGGGGCCACCAAACTaGAGCAGCGCCACGCGTGCGTTGAGAGGGTCGTCG +
Preference number: 6 (lower is better)
Translates to: GKATCCSPGPPN*SSATRALRGSS
Trigger: CGACGACCCTCTCAACGCACGCGTGGCGCTGCTGCAGTTTGGTGGCCCCGGCGAGCAGCAGGTGGCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 72 bp GTGGTCTCCAGCGCCTCGTGGATGGCCGTGAGGTTGTaGCTCAGCGGGAAGGCCACCTGCTGCTCGCCGGGG +
Preference number: 6 (lower is better)
Translates to: VVSSASWMAVRL*LSGKATCCSPG
Trigger: CCCCGGCGAGCAGCAGGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCATCCACGAGGCGCTGGAGACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 72 bp GCTCCACAGAGGGCCGATCCGTTCGGTTGCCAGCAGTaGAGACCCAGGCCCAGCGGTTCCACCAGCGCCCCG +
Preference number: 6 (lower is better)
Translates to: APQRADPFGCQQ*RPRPSGSTSAP
Trigger: CGGGGCGCTGGTGGAACCGCTGGGCCTGGGTCTCCACTGCTGGCAACCGAACGGATCGGCCCTCTGTGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS CAA 72 bp CCCTTGCTGCGGTCCTGCCGGATCTGCTCCGTCATGTaGGCCAGCGCGCAGTCGGTGAAGGTGCCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: PLLRSCRICSVM*ASAQSVKVPRR
Trigger: CCGCCGCGGCACCTTCACCGACTGCGCGCTGGCCAACATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CAA 90 bp TGGACGGTGCCCTTGCTGCGGTCCTGCCGGATCTGCTCCGTCATGTaGGCCAGCGCGCAGTCGGTGAAGGTGCCGCGGCGGAAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: WTVPLLRSCRICSVM*ASAQSVKVPRRKEL
Trigger: CAGCTCCTTCCGCCGCGGCACCTTCACCGACTGCGCGCTGGCCAACATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CAA 90 bp CCGATGGCCGTCACTGTGACGTCGCGGTCGCACAGCGCCCGCAAGTaGAGGTCATCGTCCCGAGGGTCGTGGCGCCCGTCCGTGATGACC +
Preference number: 6 (lower is better)
Translates to: PMAVTVTSRSHSARK*RSSSRGSWRPSVMT
Trigger: GGTCATCACGGACGGGCGCCACGACCCTCGGGACGATGACCTCAACTTGCGGGCGCTGTGCGACCGCGACGTCACAGTGACGGCCATCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS GCA 72 bp ATGGCCGTGAGGTTGTGGCTCAGCGGGAAGGCCACCTaGTGCTCGCCGGGGCCACCAAACTGCAGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: MAVRLWLSGKAT*CSPGPPNCSSA
Trigger: GGCGCTGCTGCAGTTTGGTGGCCCCGGCGAGCAGCAGGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp CCGCCACGCGGGCTGCGCACGATGGCATTGATGGCGTaGACCACGCCTGCGCCCACGTGCGAGAAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: PPRGLRTMALMA*TTPAPTCEKEF
Trigger: GAACTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAGCCCGCGTGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 72 bp TGCAGCTTGATGCCCCCGCAGGGGCTGCCGGTGACGTaGCCGTCGGTGATGACCACGGCGAAGTGGACGGTG +
Preference number: 6 (lower is better)
Translates to: CSLMPPQGLPVT*PSVMTTAKWTV
Trigger: CACCGTCCACTTCGCCGTGGTCATCACCGACGGCCACGTCACCGGCAGCCCCTGCGGGGGCATCAAGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CCA 72 bp CTGGCGATGTCCCGCAGGCCCTGCTCCTTCAGGTTCTaGTTGGGGGCCACGGCGAAGAGCCGGATGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LAMSRRPCSFRF*LGATAKSRMPS
Trigger: GGAGGGCATCCGGCTCTTCGCCGTGGCCCCCAACCAGAACCTGAAGGAGCAGGGCCTGCGGGACATCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 72 bp CGCCAGGAGTCGGCAGCCTGGCGCGGTCATCTCTGCTaGGTCAGCTGCCGGCCAGCACTGGCAGGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: RQESAAWRGHLC*VSCRPALAGRE
Trigger: TTCCCTTCCTGCCAGTGCTGGCCGGCAGCTGACCCAGCAGAGATGACCGCGCCAGGCTGCCGACTCCTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460886.1
CDS CAA 72 bp GTGCCGCGGCGGAAGGAGCTGATGCCCTGCAGGTTCTaGATGAAGGAGGCCCGGTCGCTGCCCGGTGGGCTG +
Preference number: 6 (lower is better)
Translates to: VPRRKELMPCRF*MKEARSLPGGL
Trigger: CAGCCCACCGGGCAGCGACCGGGCCTCCTTCATCAAGAACCTGCAGGGCATCAGCTCCTTCCGCCGCGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CAA 72 bp GTCACTGTGACGTCGCGGTCGCACAGCGCCCGCAAGTaGAGGTCATCGTCCCGAGGGTCGTGGCGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: VTVTSRSHSARK*RSSSRGSWRPS
Trigger: GGACGGGCGCCACGACCCTCGGGACGATGACCTCAACTTGCGGGCGCTGTGCGACCGCGACGTCACAGTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CAA 90 bp GTGACGTGGCCGTCGGTGATGACCACGGCGAAGTGGACGGTGCCCTaGCTGCGGTCCTGCCGGATCTGCTCCGTCATGTTGGCCAGCGCG +
Preference number: 6 (lower is better)
Translates to: VTWPSVMTTAKWTVP*LRSCRICSVMLASA
Trigger: CGCGCTGGCCAACATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACTTCGCCGTGGTCATCACCGACGGCCACGTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS GCA 72 bp ACCACGGCGAAGTGGACGGTGCCCTTGCTGCGGTCCTaGCGGATCTGCTCCGTCATGTTGGCCAGCGCGCAG +
Preference number: 6 (lower is better)
Translates to: TTAKWTVPLLRS*RICSVMLASAQ
Trigger: CTGCGCGCTGGCCAACATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACTTCGCCGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS GCA 72 bp ACACCTGCGGCTCCACAGAGGGCCGATCCGTTCGGTTaGCAGCAGTGGAGACCCAGGCCCAGCGGTTCCACC +
Preference number: 6 (lower is better)
Translates to: TPAAPQRADPFG*QQWRPRPSGST
Trigger: GGTGGAACCGCTGGGCCTGGGTCTCCACTGCTGGCAACCGAACGGATCGGCCCTCTGTGGAGCCGCAGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS CAA 72 bp TGTGTGGTCTCCAGCGCCTCGTGGATGGCCGTGAGGTaGTGGCTCAGCGGGAAGGCCACCTGCTGCTCGCCG +
Preference number: 6 (lower is better)
Translates to: CVVSSASWMAVR*WLSGKATCCSP
Trigger: CGGCGAGCAGCAGGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCATCCACGAGGCGCTGGAGACCACACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CAA 72 bp CACACCTGCGGCTCCACAGAGGGCCGATCCGTTCGGTaGCCAGCAGTGGAGACCCAGGCCCAGCGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: HTCGSTEGRSVR*PAVETQAQRFH
Trigger: GTGGAACCGCTGGGCCTGGGTCTCCACTGCTGGCAACCGAACGGATCGGCCCTCTGTGGAGCCGCAGGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS CAA 90 bp TCGGTGAAGGTGCCGCGGCGGAAGGAGCTGATGCCCTGCAGGTTCTaGATGAAGGAGGCCCGGTCGCTGCCCGGTGGGCTGAACACCTCC +
Preference number: 6 (lower is better)
Translates to: SVKVPRRKELMPCRF*MKEARSLPGGLNTS
Trigger: GGAGGTGTTCAGCCCACCGGGCAGCGACCGGGCCTCCTTCATCAAGAACCTGCAGGGCATCAGCTCCTTCCGCCGCGGCACCTTCACCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS GCA 72 bp TCTCGGTGGAGTCGGGCAGCATGGTGGCGTAGTCGTTaGGGTAGAGCTCGTGCGGCGTGCTGGCGATGTCCC +
Preference number: 6 (lower is better)
Translates to: SRWSRAAWWRSR*GRARAACWRCP
Trigger: GGGACATCGCCAGCACGCCGCACGAGCTCTACCGCAACGACTACGCCACCATGCTGCCCGACTCCACCGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000460886.1
CDS CCA 72 bp CTCTCGGTAGTGTCCGGCGAGATGACCTCCTGCTGCTaGGCCTGGATGGCCCCCAGGATTCCCCAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LSVVSGEMTSCC*AWMAPRIPQSR
Trigger: CCTGCTCTGGGGAATCCTGGGGGCCATCCAGGCCCAGCAGCAGGAGGTCATCTCGCCGGACACTACCGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CCA 72 bp CGTCCATGTCCACGTCGCTGCCCAAGGCCAGCACGGTaGGTACCACGTTCTGCTTGCGCATGGAGTGCGCCG +
Preference number: 6 (lower is better)
Translates to: RPCPRRCPRPAR*VPRSACAWSAP
Trigger: CGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGTGCTGGCCTTGGGCAGCGACGTGGACATGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CAA 90 bp TTCAGGTATTGTGTGGTCTCCAGCGCCTCGTGGATGGCCGTGAGGTaGTGGCTCAGCGGGAAGGCCACCTGCTGCTCGCCGGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: FRYCVVSSASWMAVR*WLSGKATCCSPGPP
Trigger: TGGTGGCCCCGGCGAGCAGCAGGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCATCCACGAGGCGCTGGAGACCACACAATACCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CAA 90 bp TCCACGTCGCTGCCCAAGGCCAGCACGGTGGGTACCACGTTCTGCTaGCGCATGGAGTGCGCCGACTCGTGCAGACTGTCGTTGCCCGTG +
Preference number: 6 (lower is better)
Translates to: STSLPKASTVGTTFC*RMECADSCRLSLPV
Trigger: CACGGGCAACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGTGCTGGCCTTGGGCAGCGACGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CAA 90 bp GCGGCGCTAGCAGATCCAGCGGATGAAGCGGTCGAAGAAGCCGGGTaGCGCCAGGCTGTCATAGTCCTTCTCGTGGAACACGGCGGCGCG +
Preference number: 6 (lower is better)
Translates to: AALADPADEAVEEAG*RQAVIVLLVEHGGA
Trigger: CGCGCCGCCGTGTTCCACGAGAAGGACTATGACAGCCTGGCGCAACCCGGCTTCTTCGACCGCTTCATCCGCTGGATCTGCTAGCGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp AAGTGGACGGTGCCCTTGCTGCGGTCCTGCCGGATCTaGTCCGTCATGTTGGCCAGCGCGCAGTCGGTGAAG +
Preference number: 6 (lower is better)
Translates to: KWTVPLLRSCRI*SVMLASAQSVK
Trigger: CTTCACCGACTGCGCGCTGGCCAACATGACGGAGCAGATCCGGCAGGACCGCAGCAAGGGCACCGTCCACTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS GCA 72 bp CGCCCTTGGGTCCTGGGAATCCAATGGGGCCTTCGATaGCCGGGTCTCCCTGTCTTCCCTTCTGGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: RPWVLGIQWGLR*PGLPVFPSGQA
Trigger: AGCCTGGCCAGAAGGGAAGACAGGGAGACCCGGGCATCGAAGGCCCCATTGGATTCCCAGGACCCAAGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000485591.1
CDS GCA 72 bp ACCACGTTCTGCTTGCGCATGGAGTGCGCCGACTCGTaGAGACTGTCGTTGCCCGTGACGCCGTCCGTGAGG +
Preference number: 6 (lower is better)
Translates to: TTFCLRMECADS*RLSLPVTPSVR
Trigger: CCTCACGGACGGCGTCACGGGCAACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp TCGCTGCCCAAGGCCAGCACGGTGGGTACCACGTTCTaGTTGCGCATGGAGTGCGCCGACTCGTGCAGACTG +
Preference number: 6 (lower is better)
Translates to: SLPKASTVGTTF*LRMECADSCRL
Trigger: CAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGTGCTGGCCTTGGGCAGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 72 bp TGGCGTAGTCGTTGCGGTAGAGCTCGTGCGGCGTGCTaGCGATGTCCCGCAGGCCCTGCTCCTTCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: WRSRCGRARAAC*RCPAGPAPSGS
Trigger: AGAACCTGAAGGAGCAGGGCCTGCGGGACATCGCCAGCACGCCGCACGAGCTCTACCGCAACGACTACGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000460886.1
CDS CCA 72 bp AGCGCCCGCAAGTTGAGGTCATCGTCCCGAGGGTCGTaGCGCCCGTCCGTGATGACCACCGCAAACACACGT +
Preference number: 6 (lower is better)
Translates to: SARKLRSSSRGS*RPSVMTTANTR
Trigger: ACGTGTGTTTGCGGTGGTCATCACGGACGGGCGCCACGACCCTCGGGACGATGACCTCAACTTGCGGGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 72 bp AGGCCAGCACGGTGGGTACCACGTTCTGCTTGCGCATaGAGTGCGCCGACTCGTGCAGACTGTCGTTGCCCG +
Preference number: 6 (lower is better)
Translates to: RPARWVPRSACA*SAPTRADCRCP
Trigger: CGGGCAACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGTGCTGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 72 bp GCCAGGCCACGGTGCATCTGTTTGGCAGGGAAGGTCTaGGCACACGATCTGAGGGTCCGGGCAGAGGACGTC +
Preference number: 6 (lower is better)
Translates to: ARPRCICLAGKV*AHDLRVRAEDV
Trigger: GACGTCCTCTGCCCGGACCCTCAGATCGTGTGCCCAGACCTTCCCTGCCAAACAGATGCACCGTGGCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397763.5
CDS CAA 72 bp CAGAGCAGGAGCACGGAGCAGGTGCCCTGGAGCATCTaGGCAGCACCTGTGGCCCTGAAGTCCTGGTCCCGA +
Preference number: 6 (lower is better)
Translates to: QSRSTEQVPWSI*AAPVALKSWSR
Trigger: TCGGGACCAGGACTTCAGGGCCACAGGTGCTGCCAAGATGCTCCAGGGCACCTGCTCCGTGCTCCTGCTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300527.9
ENST00000310645.9
CDS CAA 72 bp CTGCCCAAGGCCAGCACGGTGGGTACCACGTTCTGCTaGCGCATGGAGTGCGCCGACTCGTGCAGACTGTCG +
Preference number: 6 (lower is better)
Translates to: LPKASTVGTTFC*RMECADSCRLS
Trigger: CGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGTGCTGGCCTTGGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CAA 90 bp GGCGTGCACCACGCCTGCGCCCACGTGCGAGAAGGAGTTCAGGTATaGTGTGGTCTCCAGCGCCTCGTGGATGGCCGTGAGGTTGTGGCT +
Preference number: 6 (lower is better)
Translates to: GVHHACAHVREGVQV*CGLQRLVDGREVVA
Trigger: AGCCACAACCTCACGGCCATCCACGAGGCGCTGGAGACCACACAATACCTGAACTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS TCA 72 bp GGTATTGTGTGGTCTCCAGCGCCTCGTGGATGGCCGTaGGGTTGTGGCTCAGCGGGAAGGCCACCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GIVWSPAPRGWP*GCGSAGRPPAA
Trigger: AGCAGCAGGTGGCCTTCCCGCTGAGCCACAACCTCACGGCCATCCACGAGGCGCTGGAGACCACACAATACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS TCA 72 bp GGCGGGCGTGAGGGAGCTGTGAGACATGGGGTGCTGTaGGGCTCTGCCCCCATCAGGGACAAGCCAAAGAGT +
Preference number: 6 (lower is better)
Translates to: GGREGAVRHGVL*GSAPIRDKPKS
Trigger: ACTCTTTGGCTTGTCCCTGATGGGGGCAGAGCCTCACAGCACCCCATGTCTCACAGCTCCCTCACGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485591.1
CDS TCA 72 bp AATGCCCTGAGAACCTGGGCGGGCGTGAGGGAGCTGTaGGACATGGGGTGCTGTGAGGCTCTGCCCCCATCA +
Preference number: 6 (lower is better)
Translates to: NALRTWAGVREL*DMGCCEALPPS
Trigger: TGATGGGGGCAGAGCCTCACAGCACCCCATGTCTCACAGCTCCCTCACGCCCGCCCAGGTTCTCAGGGCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485591.1
CDS GCA 72 bp TTCCCTTCTGGCCAGGCTCTCCCGGCTCACCCATGTTaGCCTTGGCACCCTTCTGTCCACGGTAGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: FPSGQALPAHPC*PWHPSVHGSPW
Trigger: CCAAGGGCTACCGTGGACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCGGGAGAGCCTGGCCAGAAGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000485591.1
CDS GCA 72 bp AGCTGGATGGCCTCAAAGGTGCCCTCGTGGCTGTACTaGACCACGCCCACACGCGTCCCTGTCTCGGACTTG +
Preference number: 6 (lower is better)
Translates to: SWMASKVPSWLY*TTPTRVPVSDL
Trigger: CAAGTCCGAGACAGGGACGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS GCA 72 bp CGATACGTTCGTCGTCCAGCTGGATGGCCTCAAAGGTaGCCTCGTGGCTGTACTGCACCACGCCCACACGCG +
Preference number: 6 (lower is better)
Translates to: RYVRRPAGWPQR*PRGCTAPRPHA
Trigger: CGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACGAACGTATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS GCA 72 bp CAGGAAGACGATGTCCACGGGCCGCTGCGTGCACTGTaGCACGGACAGCTCTGTTTGGCAGGGAAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: QEDDVHGPLRAL*HGQLCLAGKVW
Trigger: CCAGACCTTCCCTGCCAAACAGAGCTGTCCGTGGCACAGTGCACGCAGCGGCCCGTGGACATCGTCTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp CGTCCAGCAGGAAGACGATGTCCACGGGCCGCTGCGTaGACTGTGCCACGGACAGCTCTGTTTGGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: RPAGRRCPRAAA*TVPRTALFGRE
Trigger: TTCCCTGCCAAACAGAGCTGTCCGTGGCACAGTGCACGCAGCGGCCCGTGGACATCGTCTTCCTGCTGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp AGCACGGTGGGTACCACGTTCTGCTTGCGCATGGAGTaGGCCGACTCGTGCAGACTGTCGTTGCCCGTGACG +
Preference number: 6 (lower is better)
Translates to: STVGTTFCLRME*ADSCRLSLPVT
Trigger: CGTCACGGGCAACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp TGCCCAAGGCCAGCACGGTGGGTACCACGTTCTGCTTaGGCATGGAGTGCGCCGACTCGTGCAGACTGTCGT +
Preference number: 6 (lower is better)
Translates to: CPRPARWVPRSA*AWSAPTRADCR
Trigger: ACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGTGGTACCCACCGTGCTGGCCTTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 72 bp AGGATTCCCCAGAGCAGGAGCACGGAGCAGGTGCCCTaGAGCATCTTGGCAGCACCTGTGGCCCTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: RIPQSRSTEQVP*SILAAPVALKS
Trigger: GGACTTCAGGGCCACAGGTGCTGCCAAGATGCTCCAGGGCACCTGCTCCGTGCTCCTGCTCTGGGGAATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000436769.5
CDS CCA 72 bp TGTTGCCCTTGGCACCCTTCTGTCCACGGTAGCCCTTaGGGCCAGAGGGCCCAGGGATTTCCAGGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: CCPWHPSVHGSP*GQRAQGFPGSS
Trigger: TGAGCTGCCTGGAAATCCCTGGGCCCTCTGGCCCCAAGGGCTACCGTGGACAGAAGGGTGCCAAGGGCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000485591.1
CDS CCA 72 bp CTGTGCCACGGACAGCTCTGTTTGGCAGGGAAGGTCTaGGCACACGATCTGAGGGTCCGGGCAGAGGACGTC +
Preference number: 6 (lower is better)
Translates to: LCHGQLCLAGKV*AHDLRVRAEDV
Trigger: GACGTCCTCTGCCCGGACCCTCAGATCGTGTGCCCAGACCTTCCCTGCCAAACAGAGCTGTCCGTGGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CAA 72 bp CACGCCTGCGCCCACGTGCGAGAAGGAGTTCAGGTATaGTGTGGTCTCCAGCGCCTCGTGGATGGCCGTGAG +
Preference number: 6 (lower is better)
Translates to: HACAHVREGVQV*CGLQRLVDGRE
Trigger: CTCACGGCCATCCACGAGGCGCTGGAGACCACACAATACCTGAACTCCTTCTCGCACGTGGGCGCAGGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CAA 72 bp TTGCGCATGGAGTGCGCCGACTCGTGCAGACTGTCGTaGCCCGTGACGCCGTCCGTGAGGAACACGAAGGAC +
Preference number: 6 (lower is better)
Translates to: LRMECADSCRLS*PVTPSVRNTKD
Trigger: GTCCTTCGTGTTCCTCACGGACGGCGTCACGGGCAACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CAA 90 bp ACGTTCTGCTTGCGCATGGAGTGCGCCGACTCGTGCAGACTGTCGTaGCCCGTGACGCCGTCCGTGAGGAACACGAAGGACAGCTCTGCG +
Preference number: 6 (lower is better)
Translates to: TFCLRMECADSCRLS*PVTPSVRNTKDSSA
Trigger: CGCAGAGCTGTCCTTCGTGTTCCTCACGGACGGCGTCACGGGCAACGACAGTCTGCACGAGTCGGCGCACTCCATGCGCAAGCAGAACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS TCA 72 bp CTCCTTGATGAGGCGGTCGTAGGCAAACTTGAGGGCTaGGGGTGTCCAGGTGCCGCCCGCAATCCACTCGAG +
Preference number: 6 (lower is better)
Translates to: LLDEAVVGKLEG*GCPGAARNPLE
Trigger: CTCGAGTGGATTGCGGGCGGCACCTGGACACCCTCAGCCCTCAAGTTTGCCTACGACCGCCTCATCAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 72 bp AACAAGGAGCTCCGCGGATCGCAGGCCCCTCCTTTCTaGGTTCCGACCCCAAAGGGAAGGTCCCTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: NKELRGSQAPPF*VPTPKGRSLLQ
Trigger: CTGGAGAAGGGACCTTCCCTTTGGGGTCGGAACCCAGAAAGGAGGGGCCTGCGATCCGCGGAGCTCCTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS CAA 72 bp CAGAGCAGGAGCACGGAGCAGGTGCCCTGGAGCATCTaGGCAGCACCTGTGGCCCTGAAGTCCAGAGTCGAA +
Preference number: 6 (lower is better)
Translates to: QSRSTEQVPWSI*AAPVALKSRVE
Trigger: TTCGACTCTGGACTTCAGGGCCACAGGTGCTGCCAAGATGCTCCAGGGCACCTGCTCCGTGCTCCTGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436769.5
CDS CAA 90 bp AGGGCTGAGGGTGTCCAGGTGCCGCCCGCAATCCACTCGAGGTTCTaGACAGCCTCCTTGAAGCTCGACAGGGAGTCGATACGTTCGTCG +
Preference number: 6 (lower is better)
Translates to: RAEGVQVPPAIHSRF*TASLKLDRESIRSS
Trigger: CGACGAACGTATCGACTCCCTGTCGAGCTTCAAGGAGGCTGTCAAGAACCTCGAGTGGATTGCGGGCGGCACCTGGACACCCTCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS GCA 72 bp GCTGCGCACGATGGCATTGATGGCGTGCACCACGCCTaGGCCCACGTGCGAGAAGGAGTTCAGGTATTGTGT +
Preference number: 6 (lower is better)
Translates to: AAHDGIDGVHHA*AHVREGVQVLC
Trigger: ACACAATACCTGAACTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCATCGTGCGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 72 bp AACAGCTCCGTCCAAACCTGTTTGGCAGGGAAGGTCTaGGCACACGATCTGAGGGTCCGGGCAGAGGACGTC +
Preference number: 6 (lower is better)
Translates to: NSSVQTCLAGKV*AHDLRVRAEDV
Trigger: GACGTCCTCTGCCCGGACCCTCAGATCGTGTGCCCAGACCTTCCCTGCCAAACAGGTTTGGACGGAGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS CCA 72 bp AAGGAGTTCAGGTATTGTGTGGTCTCCAGCGCCTCGTaGATGGCCGTGAGGTTGTGGCTCAGCGGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: KEFRYCVVSSAS*MAVRLWLSGKA
Trigger: GGCCTTCCCGCTGAGCCACAACCTCACGGCCATCCACGAGGCGCTGGAGACCACACAATACCTGAACTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS TCA 72 bp GAGGGTCCGGGCAGAGGACGTCCTCCATGTCATCGATaGACTTCTCAGCGACCAGGTCGGAGAACAGCGTCA +
Preference number: 6 (lower is better)
Translates to: EGPGRGRPPCHR*TSQRPGRRTAS
Trigger: TGACGCTGTTCTCCGACCTGGTCGCTGAGAAGTTCATCGATGACATGGAGGACGTCCTCTGCCCGGACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS GCA 72 bp ACTTCTCAGCGACCAGGTCGGAGAACAGCGTCATGTTaGGCACCTGCTGTGGCTTGTCGCAGGCGATGGAGT +
Preference number: 6 (lower is better)
Translates to: TSQRPGRRTASC*APAVACRRRWS
Trigger: ACTCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAACATGACGCTGTTCTCCGACCTGGTCGCTGAGAAGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS GCA 72 bp ATGGCATTGATGGCGTGCACCACGCCTGCGCCCACGTaGGAGAAGGAGTTCAGGTATTGTGTGGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: MALMACTTPAPT*EKEFRYCVVSS
Trigger: GCTGGAGACCACACAATACCTGAACTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCAATGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS CCA 72 bp TCGACAGGGAGTCGATACGTTCGTCGTCCAGCTGGATaGCCTCAAAGGTGCCCTCGTGGCTGTACTGCACCA +
Preference number: 6 (lower is better)
Translates to: STGSRYVRRPAG*PQRCPRGCTAP
Trigger: TGGTGCAGTACAGCCACGAGGGCACCTTTGAGGCCATCCAGCTGGACGACGAACGTATCGACTCCCTGTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS CCA 72 bp GAGACAGAAGGTTGCATGGGTGGGACATTCCTCAGGTaGCAGGGCAGGGTCTCAGAACGTGTAGCCCACGAC +
Preference number: 6 (lower is better)
Translates to: ETEGCMGGTFLR*QGRVSERVAHD
Trigger: GTCGTGGGCTACACGTTCTGAGACCCTGCCCTGCCACCTGAGGAATGTCCCACCCATGCAACCTTCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485591.1
CDS CAA 72 bp CCGCCCGCAATCCACTCGAGGTTCTTGACAGCCTCCTaGAAGCTCGACAGGGAGTCGATACGTTCGTCGTCC +
Preference number: 6 (lower is better)
Translates to: PPAIHSRFLTAS*KLDRESIRSSS
Trigger: GGACGACGAACGTATCGACTCCCTGTCGAGCTTCAAGGAGGCTGTCAAGAACCTCGAGTGGATTGCGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CAA 72 bp AACTTCTCAGCGACCAGGTCGGAGAACAGCGTCATGTaGCGCACCTGCTGTGGCTTGTCGCAGGCGATGGAG +
Preference number: 6 (lower is better)
Translates to: NFSATRSENSVM*RTCCGLSQAME
Trigger: CTCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAACATGACGCTGTTCTCCGACCTGGTCGCTGAGAAGTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CAA 72 bp GCAGATCCAGCGGATGAAGCGGTCGAAGAAGCCGGGTaGCGCCAGGCTGTCATAGTCCTTCTCGTGGAACAC +
Preference number: 6 (lower is better)
Translates to: ADPADEAVEEAG*RQAVIVLLVEH
Trigger: GTGTTCCACGAGAAGGACTATGACAGCCTGGCGCAACCCGGCTTCTTCGACCGCTTCATCCGCTGGATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300527.9
CDS GCA 72 bp TCGTTCTGCAGCTGGCTGATGAACTGCGGCACGAACTaGTTCATGTGGAAGAGCAGGATGTCCGTGGGGGAC +
Preference number: 6 (lower is better)
Translates to: SFCSWLMNCGTN*FMWKSRMSVGD
Trigger: GTCCCCCACGGACATCCTGCTCTTCCACATGAAGCAGTTCGTGCCGCAGTTCATCAGCCAGCTGCAGAACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CCA 72 bp AGCTGGCTGATGAACTGCGGCACGAACTGCTTCATGTaGAAGAGCAGGATGTCCGTGGGGGACTGCATGGTG +
Preference number: 6 (lower is better)
Translates to: SWLMNCGTNCFM*KSRMSVGDCMV
Trigger: CACCATGCAGTCCCCCACGGACATCCTGCTCTTCCACATGAAGCAGTTCGTGCCGCAGTTCATCAGCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000436769.5
CDS CAA 90 bp GCAGCTCACCTTGTAGCACTGAAACGAGGAAGCAGAGACAGAAGGTaGCATGGGTGGGACATTCCTCAGGTGGCAGGGCAGGGTCTCAGA +
Preference number: 6 (lower is better)
Translates to: AAHLVALKRGSRDRR*HGWDIPQVAGQGLR
Trigger: TCTGAGACCCTGCCCTGCCACCTGAGGAATGTCCCACCCATGCAACCTTCTGTCTCTGCTTCCTCGTTTCAGTGCTACAAGGTGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485591.1
CDS CCA 72 bp TGTTTCATGACCTTGATGATGCGGTTGATGGTGTCCTaGTCGATCTCGGTGGAGTCGGGCAGCATGGTGGCG +
Preference number: 6 (lower is better)
Translates to: CFMTLMMRLMVS*SISVESGSMVA
Trigger: CGCCACCATGCTGCCCGACTCCACCGAGATCGACCAGGACACCATCAACCGCATCATCAAGGTCATGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000460886.1
CDS CCA 72 bp CAGGTCGGAGAACAGCGTCATGTTGCGCACCTGCTGTaGCTTGTCGCAGGCGATGGAGTAGAGGTTTTCACT +
Preference number: 6 (lower is better)
Translates to: QVGEQRHVAHLL*LVAGDGVEVFT
Trigger: AGTGAAAACCTCTACTCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAACATGACGCTGTTCTCCGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CCA 72 bp CTGAAACGAGGAAGCAGAGACAGAAGGTTGCATGGGTaGGACATTCCTCAGGTGGCAGGGCAGGGTCTCAGA +
Preference number: 6 (lower is better)
Translates to: LKRGSRDRRLHG*DIPQVAGQGLR
Trigger: TCTGAGACCCTGCCCTGCCACCTGAGGAATGTCCCACCCATGCAACCTTCTGTCTCTGCTTCCTCGTTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485591.1
CDS CAA 90 bp GTCCCTGTCTCGGACTTGGGGTCCTTAGCGATGGCACCCAGCCTGTaGACCACGTTGATGACGAAGTTCTTCTCCAGTGTGAAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: VPVSDLGSLAMAPSL*TTLMTKFFSSVKLV
Trigger: CACCAACTTCACACTGGAGAAGAACTTCGTCATCAACGTGGTCAACAGGCTGGGTGCCATCGCTAAGGACCCCAAGTCCGAGACAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS CCA 72 bp TCATGTTGCGCACCTGCTGTGGCTTGTCGCAGGCGATaGAGTAGAGGTTTTCACTCTCGTGCTTCTCGTGGA +
Preference number: 6 (lower is better)
Translates to: SCCAPAVACRRR*SRGFHSRASRG
Trigger: TCCACGAGAAGCACGAGAGTGAAAACCTCTACTCCATCGCCTGCGACAAGCCACAGCAGGTGCGCAACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
CDS CAA 72 bp TCGGACTTGGGGTCCTTAGCGATGGCACCCAGCCTGTaGACCACGTTGATGACGAAGTTCTTCTCCAGTGTG +
Preference number: 6 (lower is better)
Translates to: SDLGSLAMAPSL*TTLMTKFFSSV
Trigger: CACACTGGAGAAGAACTTCGTCATCAACGTGGTCAACAGGCTGGGTGCCATCGCTAAGGACCCCAAGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS CAA 72 bp AACCTTTCAGCACAAAACAGCTCCGTCCAAACCTGTTaGGCAGGGAAGGTCTGGGCACACGATCTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: NLSAQNSSVQTC*AGKVWAHDLRV
Trigger: GACCCTCAGATCGTGTGCCCAGACCTTCCCTGCCAAACAGGTTTGGACGGAGCTGTTTTGTGCTGAAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310645.9
ENST00000409416.6
CDS CAA 90 bp TCGGACTTGGGGTCCTTAGCGATGGCACCCAGCCTGTTGACCACGTaGATGACGAAGTTCTTCTCCAGTGTGAAGTTGGTGTACCCAATG +
Preference number: 6 (lower is better)
Translates to: SDLGSLAMAPSLLTT*MTKFFSSVKLVYPM
Trigger: CATTGGGTACACCAACTTCACACTGGAGAAGAACTTCGTCATCAACGTGGTCAACAGGCTGGGTGCCATCGCTAAGGACCCCAAGTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1
CDS CAA 90 bp AGCCTGTTGACCACGTTGATGACGAAGTTCTTCTCCAGTGTGAAGTaGGTGTACCCAATGCTCTCGGAGCTGTCGATGACGAAGACCACG +
Preference number: 6 (lower is better)
Translates to: SLLTTLMTKFFSSVK*VYPMLSELSMTKTT
Trigger: CGTGGTCTTCGTCATCGACAGCTCCGAGAGCATTGGGTACACCAACTTCACACTGGAGAAGAACTTCGTCATCAACGTGGTCAACAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300527.9
ENST00000310645.9
ENST00000397763.5
ENST00000409416.6
ENST00000413758.1