RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL5A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000080573

Ensembl transcript IDs: ENST00000264828.4, ENST00000461214.1

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCCAGGGAACCCCAGCCCCCAGCACCCTGGAAAGGAGAAGGAATaGCTGTCCGTGATGAGCGAAGTCACATCCCATTGGCTCCATAGT +
Preference number: 1 (lower is better)
Translates to: GPGNPSPQHPGKEKE*LSVMSEVTSHWLHS
Trigger: ACTATGGAGCCAATGGGATGTGACTTCGCTCATCACGGACAGTCATTCCTTCTCCTTTCCAGGGTGCTGGGGGCTGGGGTTCCCTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR CCA 90 bp TTATTCTCAGATTTGAGATGCAAATTATGCCCTATGGCCTGGCGGTaGGGGGCCAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCT +
Preference number: 1 (lower is better)
Translates to: LFSDLRCKLCPMAWR*GARLGLESLIISQP
Trigger: AGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTGGCCCCCCACCGCCAGGCCATAGGGCATAATTTGCATCTCAAATCTGAGAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATGGGGTGAGAGGAGGCTaGACCCTTGGGCCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: AWAGISHHIPAFPKEEADGVRGG*TLGPGN
Trigger: GTTCCCTGGCCCAAGGGTCCAGCCTCCTCTCACCCC...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR-3UTR CCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGTATGCCACCTGGAATaGGGTGAGAGGAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRVCHLE*GERRLD
Trigger: GTCCAGCCTCCTCTCACCCCATTCCAGGTGGCATAC...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGGTCCCCAAACCACCTaGCATGGCAAGGTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAGPQTT*HGKVSL
Trigger: CAGGCTCACCTTGCCATGCCAGGTGGTTTGGGGACC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR-3UTR TCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGGGAAAGGAGAAGGAATaGCTGTCCGTGATGAGCGAA +
Preference number: 2 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLGKEKE*LSVMSE
Trigger: TTCGCTCATCACGGACAGTCATTCCTTCTCCTTTCC...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR-3UTR GCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATAGCCTCAGCACCAAATaGACCCCATTCTGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDSLSTK*TPFWGS
Trigger: GGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCT...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCACAGCCCCCAGCACCCTaGAAAGGAGAAGGAATGACT +
Preference number: 2 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAQPPAP*KGEGMT
Trigger: AGTCATTCCTTCTCCTTTCCAGGGTGCTGGGGGCTG...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR-3UTR GCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATGAGTTAGAAGCTCATTaGATGGGGGTTCAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDELEAH*MGVQGV
Trigger: CACCCCTTGAACCCCCATGCAATGAGCTTCTAACTC...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR-3UTR GCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGAGAAAGAGCCAGACTaGAGTATGCCACCTGGAATG +
Preference number: 2 (lower is better)
Translates to: GLLFISSELEAHCMGVQGEKEPD*SMPPGM
Trigger: CATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR-3UTR TCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATTTTGTTCATCAGCTCTaGGTTAGAAGCTCATTGCAT +
Preference number: 2 (lower is better)
Translates to: AWAGISHHIPAFPKEEADFVHQL*VRSSLH
Trigger: ATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAA...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR CCA 72 bp GGGAGGGGAGAAAGAGCCAGACTGCAGTATGCCACCTaGAATGGGGTGAGAGGAGGCTGGACCCTTGGGCCA +
Preference number: 3 (lower is better)
Translates to: GRGERARLQYAT*NGVRGGWTLGP
Trigger: TGGCCCAAGGGTCCAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
3UTR CCA 72 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATaGGGTGAGAGGAGGCTGGACCCTTGGGCCAGGGAA +
Preference number: 3 (lower is better)
Translates to: GRKSQTAVCHLE*GERRLDPWARE
Trigger: TTCCCTGGCCCAAGGGTCCAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCACCAGTCGGGGCGGCTaGGGGGCGCGGCGACTTCTC +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTTSRGG*GARRLL
Trigger: GAGAAGTCGCCGCGCCCCGCAGCCGCCCCGACTGGT...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCGGCTCCTGGAGGCCCTaGGTCTCCAGCGTCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTGSWRP*VSSVPS
Trigger: CGAGGGGACGCTGGAGACCCAGGGCCTCCAGGAGCC...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCTTGCGGTGCAGCTCGTaGCACACGAGGCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPLRCSS*HTRPGR
Trigger: GCGCCCGGGCCTCGTGTGCCACGAGCTGCACCGCAA...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCGAGGCCCCGGTTGCCTaGAGTGCCCTTCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPEAPVA*SALHSP
Trigger: CGGGGAGTGAAGGGCACTTCAGGCAACCGGGGCCTC...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGCAGGGCGGCCCATCTTaGCCACTCGGCCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWQGGPS*PLGQGV
Trigger: GACCCCCTGGCCGAGTGGGCAAGATGGGCCGCCCTG...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCCCCTTGGGGCCTGGTTaGCCTGTGGCACCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPPLGPG*PVAPGC
Trigger: GCAACCGGGTGCCACAGGGCAACCAGGCCCCAAGGG...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGCCTTGGGCCCCGGGATaGCTGGGGCTCCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWPWAPG*LGLLEA
Trigger: GGCCTCCAGGAGCCCCAGGCATCCCGGGGCCCAAGG...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGCGCCTGCGCAGCCCATaGAGCTCGGCAGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWRLRSP*SSAGAP
Trigger: GGGTGCCCCTGCCGAGCTGCATGGGCTGCGCAGGCG...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGGCCAGCAGGGCCCGGTaGACCAGGGTCGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLASRAR*TRVARE
Trigger: TTCCCTGGCGACCCTGGTCCACCGGGCCCTGCTGGC...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCAATGCCGGGGATTCCTaGGAGGCCAGCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTNAGDS*EASRAR
Trigger: CCGGGCCCTGCTGGCCTCCCAGGAATCCCCGGCATT...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCGGCTCCCCAGCCTaGCCAGTGGGCCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGPGSPA*PVGPGG
Trigger: ACCTCCAGGGCCCACTGGCCAGGCTGGGGAGCCGGG...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCACCCGGGCGACCCGTaGGGCCAGGAGAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGHPGDP*GQESLW
Trigger: CCAGAGGCTCTCCTGGCCCCACGGGTCGCCCGGGTG...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGGGCCCCCACGGGCCCTaGGGGGCCCTTATCACCCTT +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWGPHGP*GALITL
Trigger: AAGGGTGATAAGGGCCCCCCAGGGCCCGTGGGGGCC...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGCTCCGGGCAGCCCCGTaGGGCCCACGCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWLRAAP*GPRSLW
Trigger: CCAAAGGGAGCGTGGGCCCCACGGGGCTGCCCGGAG...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCGGCTCCCAGGAGGCCTaGTTCACCCACAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPGSQEA*FTHRAR
Trigger: CCTGGCCCTGTGGGTGAACCAGGCCTCCTGGGAGCC...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGACTTCTCGGGCTCGGTaGAGTCACTCGCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLTSRAR*SHSRRP
Trigger: CGGCCGCCGCGAGTGACTGCACCGAGCCCGAGAAGT...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTGTCCCCGGCAGAAGCTaGAGCGCGGCCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGVPGRS*SAARSR
Trigger: CCTGCTCCTGGCCGCGCTGCAGCTTCTGCCGGGGAC...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGCCAGGGGCTCCATCCTaGCCCACATCGCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLPGAPS*PTSPLG
Trigger: CCCCAAGGGCGATGTGGGCCAGGATGGAGCCCCTGG...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCAGGACCCCGTATCCCTaGTTGTCCAGGTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPRTPYP*LSRWAR
Trigger: GCGGGCCCACCTGGACAACCAGGGATACGGGGTCCT...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCTCTCCCGGAGGGCCTaGCAGCCCCTGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGLSRRA*QPLQSR
Trigger: CCTGGACTGCAGGGGCTGCCAGGCCCTCCGGGAGAG...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCGGGGTGAGAGGAGGCTaGACCCTTGGGCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTGVRGG*TLGPGN
Trigger: GTTCCCTGGCCCAAGGGTCCAGCCTCCTCTCACCCC...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGGCCCCACATCGCCCTTaGAGCCTGGGAAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLAPHRP*SLGSRP
Trigger: AGGACGGCTTCCCAGGCTTCAAGGGCGATGTGGGGC...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCTCTGTGAGGTTGACCTaGTGGGGGAGGGGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPSVRLT*WGRGRK
Trigger: CTTCCGCCCCCTCCCCCAGCAGGTCAACCTCACAGA...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCCCTTTCAGACCTGGATaGCCGGGGAGACCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTPFRPG*PGRPTG
Trigger: CCCTGTGGGTCTCCCCGGGCATCCAGGTCTGAAAGG...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGCCTGTGGCACCCGGTTaGCCCCTCTCTCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWPVAPG*PLSPRE
Trigger: TTCCCGTGGAGAGAGGGGGCAACCGGGTGCCACAGG...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCACGAAGCGCCGGCGCCTaGGCAGCCCATGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEARSAGA*AAHAAR
Trigger: CCGAGCTGCATGGGCTGCGCAGGCGCCGGCGCTTCG...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCGGGTCCTGGGGCTCCTaGAGGTCCCTCAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPGSWGS*RSLKLL
Trigger: CAGCAGTTTGAGGGACCTCCAGGAGCCCCAGGACCC...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGCTCACCATCCTCTCCTaGGGGACCGGGTTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLLTILS*GTGLPH
Trigger: GTGGGGCAACCCGGTCCCCCAGGAGAGGATGGTGAG...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGGGACCGGGGAGTCCCTaGGACCCATGGTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWGPGSP*DPWFPC
Trigger: GCAGGGAAACCATGGGTCCCAGGGACTCCCCGGTCC...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGGGCCCACATCGCCCTTaGGGCCTGGTTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWGPHRP*GLVALW
Trigger: CCACAGGGCAACCAGGCCCCAAGGGCGATGTGGGCC...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGCCCAAGGGGTCCTGGTaGTCCCAGTTCCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWPKGSW*SQFPLG
Trigger: GCCAAGGGGGAACTGGGACCACCAGGACCCCTTGGG...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCACACCAGGGGAGCCATTaGCCCCCACGGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAHQGSH*PPRALG
Trigger: CCCCAGGGCCCGTGGGGGCCAATGGCTCCCCTGGTG...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTGTCTCCCTTCAGCCCTaGGAGGCCAGAGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGVSLQP*EARGPQ
Trigger: CTGGGGCCCTCTGGCCTCCCAGGGCTGAAGGGAGAC...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGAGCCGGCAGCCATCCTaGGGGACGCTGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWSRQPS*GTLTVA
Trigger: AGCCACTGTCAGCGTCCCCCAGGATGGCTGCCGGCT...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCTCCTGCCCTTCCCCTTaGGACCTCGCCCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPSCPSP*DLALSS
Trigger: GGAAGAAAGGGCGAGGTCGCAAGGGGAAGGGCAGGA...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTGCCCCGAGCTCCATCTaGTCCAGGGCGGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGAPSSI*SRAAHL
Trigger: AAGATGGGCCGCCCTGGAGCAGATGGAGCTCGGGGC...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGGACCCATGGTTTCCCTaGTGTCCCGGAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWDPWFP*CPGGPG
Trigger: ACCAGGCCCTCCGGGACAGCAGGGAAACCATGGGTC...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGCCCGGTTGCCTGAAGTaGCCTTCACTCCCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWPGCLK*PSLPEV
Trigger: GACCTCGGGGAGTGAAGGGCACTTCAGGCAACCGGG...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGCTGGCACCCCAAGCTTaGCCTTCTCCCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLLAPQA*PSPQLS
Trigger: GCTCAGCTGGGGAGAAGGGCAAGCTTGGGGTGCCAG...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGGCCTGGCAGCCCCTaGAGTCCAGGAGGGCCAATC +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRGPGSP*SPGGPI
Trigger: GATTGGCCCTCCTGGACTGCAGGGGCTGCCAGGCCC...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGGCAGGTGCGGGTGGTTaGGGTGCAGCTCGTGGCACA +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWAGAGG*GAARGT
Trigger: TGTGCCACGAGCTGCACCGCAACCACCCGCACCTGC...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCGCAGGACAGACTGATTaGCTGGCTGTCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPAGQTD*LAVPAR
Trigger: CCTTGCGGGGACAGCCAGCCAATCAGTCTGTCCTGC...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGCCTCGGGGACCCTGTaGCCCTTCTGCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRASGTL*PFCSLL
Trigger: GAGGAGGGAGCAGAAGGGCCACAGGGTCCCCGAGGC...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCCCGGGTTGCCCCACATaGCCAAAGTCACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPPGCPT*PKSPLW
Trigger: CCAAAGGGGTGACTTTGGCCATGTGGGGCAACCCGG...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGGTGCCAATGAGTCCCTaGGGACCGGGGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWVPMSP*GPGSPW
Trigger: CCAGGGACTCCCCGGTCCCCAGGGACTCATTGGCAC...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCAGGGCCATCGGATCCTaGGAGGCCTGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPRAIGS*EAWNSW
Trigger: CCAGGAATTCCAGGCCTCCCAGGATCCGATGGCCCT...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGCCCCTTTCTCTCCCGTaGGGCCCTCATGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLPLSLP*GPHVLG
Trigger: ACCCAGGACATGAGGGCCCCACGGGAGAGAAAGGGG...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGGCGTCCTGGATAACCTaGGAGGCCTGGCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWASWIT*EAWHPK
Trigger: CTTGGGGTGCCAGGCCTCCCAGGTTATCCAGGACGC...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCAATGCCTCCTGCTaGGCCCAAAGGACCGCGCTC +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWSNASC*AQRTAL
Trigger: GAGCGCGGTCCTTTGGGCCCAGCAGGAGGCATTGGA...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGGGCCCACGCTCCCTTTaGCTCCATCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWGPRSL*LHPLQG
Trigger: CCCCTGGAGAGGATGGAGCCAAAGGGAGCGTGGGCC...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTCCTGGGGGCCCAGGGTaGCCCAGAGAGCCAATGGGA +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRPGGPG*PREPMG
Trigger: TCCCATTGGCTCTCTGGGCCACCCTGGGCCCCCAGG...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGTGGCCTGGCCAATTCTaGATGCCCGGTCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLWPGQF*MPGHPL
Trigger: CAGAGGGTGACCGGGCATTCAGAATTGGCCAGGCCA...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCTCACCATCTATGCTaGCGGCCACACGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWSHHLC*RPHGAT
Trigger: GGTGGCACCGTGTGGCCGTCAGCATAGATGGTGAGA...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGACTGGAACGGCATCATaGTCACAGTGCCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLTGTAS*SQCPVG
Trigger: GCCCACCGGGCACTGTGATCATGATGCCGTTCCAGT...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGCCGGGAAAGCCCCTaGGTCCAGCTGGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRGRESP*VQLALL
Trigger: AAGAAGGGCCAGCTGGACTCAGGGGCTTTCCCGGCC...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCCCACGGCGCCTGGCTaGCCAACTCCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDPTAPG*PTPPGS
Trigger: GCTGCCTGGAGGAGTTGGTCAGCCAGGCGCCGTGGG...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCAAGCTCAGCGATGTaGGCGAGGCCAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGPSSAM*ARPAPP
Trigger: AGGAGGTGCTGGCCTCGCTCACATCGCTGAGCTTGG...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCTCTGGCAGGAGTAGGTaGAGTTCTGGCGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTSGRSR*SSGELW
Trigger: CCACAGCTCGCCAGAACTTCACCTACTCCTGCCAGA...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGGACACTCTCAGCTGCTaGAGCAGACGGGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWDTLSC*SRRGPV
Trigger: AACTGGGCCCCGTCTGCTTCAGCAGCTGAGAGTGTC...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGAGTGCCAGGCCCAACTaGCGGGCACCCCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLSARPN*RAPLSS
Trigger: TGATGAAAGGGGTGCCCGGCAGTTGGGCCTGGCACT...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGCAGCGCTGGCCCCAGTaGCAGGCCCAACTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGQRWPQ*QAQLPG
Trigger: GCCCGGCAGTTGGGCCTGGCACTGGGGCCAGCGCTG...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCCCGAGATGGATATTCTaGTGCCCGGAAGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTPRWIF*CPEVRA
Trigger: GGCCCTGACTTCCGGGCAGCAGAATATCCATCTCGG...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGCTCGGATCCCATCAATaGCGGGGATTCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLLGSHQ*RGFLGG
Trigger: GCCTCCCAGGAATCCCCGGCATTGATGGGATCCGAG...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGCAACGGGGCCTTCGCTaGCACTTTGGCCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLQRGLR*HFGQEV
Trigger: GACTTCCTGGCCAAAGTGGCAGCGAAGGCCCCGTTG...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGCCCGGGACCCCTTCTTaGCTGCAGGGCCAACGGGGC +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRPGTPS*LQGQRG
Trigger: GCCCCGTTGGCCCTGCAGGCAAGAAGGGGTCCCGGG...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGGAAAGAGTTCCCACGTaGGGATGCCGAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLERVPT*GCRACW
Trigger: CCAGCACGCTCGGCATCCCCACGTGGGAACTCTTTC...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCGATCACAGTGCCCGGTaGGCCTCGGATCCCATCAAT +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTDHSAR*ASDPIN
Trigger: ATTGATGGGATCCGAGGCCCACCGGGCACTGTGATC...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGGAGACCCACAGGGCCTaGGCGCCCAGTGAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGETHRA*APSEPH
Trigger: GTGGGGCTCACTGGGCGCCCAGGCCCTGTGGGTCTC...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCTCCCTTTCTCTCCTATaGGTCCCAGGGGACCGGGAA +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTSLSLL*VPGDRE
Trigger: TTCCCGGTCCCCTGGGACCCATAGGAGAGAAAGGGA...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCACCCTCTAGCCCCCATTaGACCCGTCCTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAPSSPH*TRPPWG
Trigger: CCCCCAGGGAGGACGGGTCCAATGGGGGCTAGAGGG...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTTCAGGCAGGTGCGGGTaGTTGCGGTGCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRSGRCG*LRCSSW
Trigger: CCACGAGCTGCACCGCAACCACCCGCACCTGCCTGA...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCGTATGCCACCTGGAATaGGGTGAGAGGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPVCHLE*GERRLD
Trigger: GTCCAGCCTCCTCTCACCCCATTCCAGGTGGCATAC...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATCCCTGGAGTGCCCTCTaGTCCAGTGGGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADPWSAL*SSGALG
Trigger: CCCCAAGGCCCCACTGGATCAGAGGGCACTCCAGGG...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCAGCTCCAGATGGGCCTaGGTCCCCCTTTTCACCAAT +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPSSRWA*VPLFTN
Trigger: ATTGGTGAAAAGGGGGACTCAGGCCCATCTGGAGCT...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCGGAACCATCTATGCCTaGAACTCCAGGGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPGTIYA*NSRVSW
Trigger: CCAGGAGACCCTGGAGTTTCAGGCATAGATGGTTCC...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCATCCACAGGATCGGCCTaGGTCCCCGGCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEASTGSA*VPGRSC
Trigger: GCAGCTTCTGCCGGGGACGCAGGCCGATCCTGTGGA...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTCCCTGGAGGTCCCTCTaGTCCCCTCTCACCATCCTC +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRPWRSL*SPLTIL
Trigger: GAGGATGGTGAGAGGGGAGCAGAGGGACCTCCAGGG...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGATAGCCCGGAGGGCCTaGCGACCCTGGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGIARRA*RPWWTL
Trigger: CAGGGTCCACCAGGGTCGGCAGGCCCTCCGGGCTAT...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTCCTGGAGGCCCCGGTTaGCTGAAGTGCCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRPGGPG*LKCPSL
Trigger: GAGTGAAGGGCACTTCAGGCAACCGGGGCCTCCAGG...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTGCTCCTCTCCATTGGTaGCAAGGAAGCGGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGAPLHW*QGSGRS
Trigger: ACTCCGCCCGCTTCCTTGGCACCAATGGAGAGGAGC...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGAGCCTCAGCACCAAATaGACCCCATTCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWSLSTK*TPFWGS
Trigger: GGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCT...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTGTTTCTGGTTCACCCTaGGGAGCCACTGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGVSGSP*GATVAA
Trigger: GGCAGCCACAGTGGCTCCCCAGGGTGAACCAGAAAC...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCTCTTGGGGATGTCAGTaGAGGTCTGGTTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPSWGCQ*RSGSLR
Trigger: CCGCAGAGAACCAGACCTCCACTGACATCCCCAAGA...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATGGGCCAACCACCCCTTaGGGTCCTGGGGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADGPTTP*GPGAPG
Trigger: TCCAGGAGCCCCAGGACCCCAAGGGGTGGTTGGCCC...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATCTGGCCAGTGGGCCCTaGAGGTCCCTCTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADLASGP*RSLCSP
Trigger: AGGGGAGCAGAGGGACCTCCAGGGCCCACTGGCCAG...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGGCCAAGCAGTCCTCGTaGACCCGGCTCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRAKQSS*TRLPSL
Trigger: CAGGCTGGGGAGCCGGGTCCACGAGGACTGCTTGGC...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTAGGTCCAGGGCGTCCTaGATAACCTGGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRRSRAS*ITWEAW
Trigger: CCAGGCCTCCCAGGTTATCCAGGACGCCCTGGACCT...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATATCGCCCTTGGGGCCTaGTTGCCCTGTGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDIALGA*LPCGTR
Trigger: CCGGGTGCCACAGGGCAACCAGGCCCCAAGGGCGAT...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTCTCCATGGGGACCCATaGACCCGACGTCTCCGACCT +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRLHGDP*TRRLRP
Trigger: AGGTCGGAGACGTCGGGTCCATGGGTCCCCATGGAG...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGGGACCCCGAGGACCTaGAGCTCCATGGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAGTPRT*SSMGTH
Trigger: ATGGGTCCCCATGGAGCTCCAGGTCCTCGGGGTCCC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGGCCCATCAGGACCTaGCTCCCCCTTGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: QSREVPLPSVVRPQSFHRGPIRT*LPLGTF
Trigger: AAAGGTGCCAAGGGGGAGCCAGGTCCTGATGGGCCC...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGGTAGGGGTCCCAGCCTaGGATCAGGAGACATCCAGT +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLVGVPA*DQETSS
Trigger: ACTGGATGTCTCCTGATCCCAGGCTGGGACCCCTAC...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTACGCCTGGCAACCCCTaGTCTCCTTTCTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGTPGNP*SPFSPA
Trigger: AGCTGGTGAGAAAGGAGATCAGGGGTTGCCAGGCGT...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTTCCCACGTGGGGATaGCGAGCGTGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGVPTWG*RACWPG
Trigger: GCCAGGCCAGCACGCTCGGCATCCCCACGTGGGAAC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATGGGACCTGGGTGTCCTaGAGGACCCCGTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDGTWVS*RTPYPW
Trigger: CCAGGGATACGGGGTCCTGCAGGACACCCAGGTCCC...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGGGGCCTGGTGGGCCTaGAGGTCCAGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGGAWWA*RSSVST
Trigger: CGTGGAGACACTGGACCTGCAGGCCCACCAGGCCCC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATTGCGGGTGGTTGCGGTaGAGCTCGTGGCACACGAGG +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDCGWLR*SSWHTR
Trigger: CCTCGTGTGCCACGAGCTGCACCGCAACCACCCGCA...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCAAAGTCACCCCTTTaGCCCTTCTCACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGPKSPL*PFSPGS
Trigger: GCTGCCTGGTGAGAAGGGCCAAAGGGGTGACTTTGG...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGAGGGCCTGGTTCTCCTaGAGGACCCACATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLRAWFS*RTHIAF
Trigger: AAAGGCAATGTGGGTCCTCCAGGAGAACCAGGCCCT...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATGGGGCCCTCATGTCCTaGGTGACCCAGAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADGALMS*VTQRAI
Trigger: GATGGCCCTCTGGGTCACCCAGGACATGAGGGCCCC...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATGCCTGCCGACCCTGGTaGACCCTGAGCCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDACRPW*TLSPFL
Trigger: GAGAAAGGGGCTCAGGGTCCACCAGGGTCGGCAGGC...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATAGGGCCTGCCGACCCTaGTGGACCCTGAGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDRACRP*WTLSPF
Trigger: AAAGGGGCTCAGGGTCCACCAGGGTCGGCAGGCCCT...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGGCCTGGTTGCCCTGTaGCACCCGGTTGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGGLVAL*HPVAPS
Trigger: AGAGGGGGCAACCGGGTGCCACAGGGCAACCAGGCC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGTCCCAGTTCCCCCTTaGCCCCCTCTCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAVPVPP*PPLCLP
Trigger: TGGAAGGCAGAGAGGGGGCCAAGGGGGAACTGGGAC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATGATCCAGTGGGGCCTTaGGGACCCCGAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADDPVGP*GPRGPG
Trigger: TCCAGGTCCTCGGGGTCCCCAAGGCCCCACTGGATC...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGTGGACCCGTCCTCCCTaGGGGCCCATCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGWTRPP*GPIRTW
Trigger: CCAGGTCCTGATGGGCCCCCAGGGAGGACGGGTCCA...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGACTGGAAGCGGGACTaGGACGAAGCGCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGDWKRD*DEAPAP
Trigger: AGGCGCCGGCGCTTCGTCCCAGTCCCGCTTCCAGTC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGGCTGTAGTCACCCGTaGCTTCGTCCAGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAGCSHP*LRPARQ
Trigger: CTGCCTGGCTGGACGAAGCCACGGGTGACTACAGCC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGGACAGCAGGACAGACTaGTTGGCTGGCTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRDSRTD*LAGCPR
Trigger: GCGGGGACAGCCAGCCAATCAGTCTGTCCTGCTGTC...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGACCCTGGTGGACCCTaGGCCCCTTTCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGDPGGP*APFSPV
Trigger: CACGGGAGAGAAAGGGGCTCAGGGTCCACCAGGGTC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGCCCCCACAAAGCCTCTaGCTCCGTCATCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWPPQSL*LRHLLS
Trigger: AGAAAGGAGATGACGGAGTCAGAGGCTTTGTGGGGG...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAATCGACCCATGTGGCCTaGAGGACCCCTCTTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQSTHVA*RTPLAG
Trigger: CCCGGCAAGAGGGGTCCTTCAGGCCACATGGGTCGA...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATCATCCTGGGGGACGCTaGCAGTGGCTGCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADHPGGR*QWLLSS
Trigger: AGACGACAGCAGCCACTGTCAGCGTCCCCCAGGATG...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGCACTGTGGCTGCCGGTaGCAGGTTGTCACAGTCGGG +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRHCGCR*QVVTVG
Trigger: CCCGACTGTGACAACCTGGCACCGGCAGCCACAGTG...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATGGGAGCCACTGTGGCTaGCGGTGCCAGGTTGTCACA +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADGSHCG*RCQVVT
Trigger: TGTGACAACCTGGCACCGGCAGCCACAGTGGCTCCC...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCCTGGGGGACCGGGTTaGCCCACATGGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDPGGPG*PTWPKS
Trigger: TGACTTTGGCCATGTGGGGCAACCCGGTCCCCCAGG...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGCAGGGGGACCTTTCTTaGCTGGGGGTCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRQGDLS*LGVQQL
Trigger: GAGCTGCTGGACCCCCAGGCAAGAAAGGTCCCCCTG...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGCTTTCTCCCCTTCTCTaGCTTCTCGACCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWLSPLL*LLDPCG
Trigger: GCCACATGGGTCGAGAAGGCAGAGAAGGGGAGAAAG...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAATCCCCATCAGGCAGGTaGGGGTGGTTGCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQSPSGR*GWLRCS
Trigger: GCTGCACCGCAACCACCCGCACCTGCCTGATGGGGA...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAGCCAGACTGCAGTATaGCACCTGGAATGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWSQTAV*HLEWGE
Trigger: CTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCT...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCGAGAAAGAGCCAGACTaGAGTATGCCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPEKEPD*SMPPGM
Trigger: CATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTC...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCATGCCCGGTCACCCTCTaGAGTCCTCTGGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEACPVTL*SPLGTE
Trigger: TTCTGTCCCCAGAGGACTCCAGAGGGTGACCGGGCA...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGCCTGGGGAGCCACTGTaGCTGCCGGTGCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGPGEPL*LPVPGC
Trigger: ACAACCTGGCACCGGCAGCCACAGTGGCTCCCCAGG...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCGGAAGTCAGGGCCCATaGTGGAATCATCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTGSQGP*WNHLLL
Trigger: AAGAAGGAGATGATTCCACCATGGGCCCTGACTTCC...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCGAACTGAGTCCGAGATaGATATTCTGCTGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTELSPR*IFCCPE
Trigger: TTCCGGGCAGCAGAATATCCATCTCGGACTCAGTTC...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATTCGCCTTTCTCCCCCTaGAGGCCCCGGTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADSPFSP*RPRLPE
Trigger: TTCAGGCAACCGGGGCCTCCAGGGGGAGAAAGGCGA...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATTCCACGGGAACCTGGTaGTCCCCGCTCTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADSTGTW*SPLSFQ
Trigger: CTGGAAGGAGAGCGGGGACCACCAGGTTCCCGTGGA...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGGACCTGGAGCTCCATaGGGACCCATGGACCCGACG +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGGPGAP*GPMDPT
Trigger: CGTCGGGTCCATGGGTCCCCATGGAGCTCCAGGTCC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAATGCCCTCTGATCCAGTaGGGCCTTGGGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQCPLIQ*GLGDPE
Trigger: CTCGGGGTCCCCAAGGCCCCACTGGATCAGAGGGCA...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAACTCACCCACGGCGCCTaGCTGACCAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQLTHGA*LTNSSR
Trigger: CCTGGAGGAGTTGGTCAGCCAGGCGCCGTGGGTGAG...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAACACCAATGTCTCCCTTaGGCCCCGGGATGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQHQCLP*APGCLG
Trigger: CCCCAGGCATCCCGGGGCCCAAGGGAGACATTGGTG...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAGCCGCCCTCCACGACTaGAAGCGGGACTGGGACGAA +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQAALHD*KRDWDE
Trigger: TTCGTCCCAGTCCCGCTTCCAGTCGTGGAGGGCGGC...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCTGCACGACATTCACTaGGGACCCGTCGGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDLHDIH*GPVGVH
Trigger: GTGGACGCCGACGGGTCCCCAGTGAATGTCGTGCAG...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCATCTGGCCAAAGTCAGTaGCCGCCACATCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEASGQSQ*PPHPTG
Trigger: CCCTGTGGGATGTGGCGGCCACTGACTTTGGCCAGA...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATTGGGGGTTCAAGGGGTaGGGAGGTGAGGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADWGFKG*GGEAWV
Trigger: CACCCAAGCCTCACCTCCCCACCCCTTGAACCCCCA...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGTGCTGCAGAACTGCCTaGGCCTGGGCCTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGCCRTA*AWACWN
Trigger: ATTCCAGCAGGCCCAGGCTCAGGCAGTTCTGCAGCA...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGCCCTCATGTCCTGGGTaGCCCAGAGGGCCATCGGAT +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGPSCPG*PRGPSD
Trigger: ATCCGATGGCCCTCTGGGTCACCCAGGACATGAGGG...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAACTGACGGCCACACGGTaGCACCTGCCATCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQLTATR*HLPSVR
Trigger: CCTCACAGATGGCAGGTGGCACCGTGTGGCCGTCAG...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATAGTCTGCTGCAGAACTaGCTGAGCCTGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADSLLQN*LSLGLL
Trigger: CAGCAGGCCCAGGCTCAGGCAGTTCTGCAGCAGACT...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATAAGTCCAATGCCTCCTaGTGGGCCCAAAGGACCGCG +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDKSNAS*WAQRTA
Trigger: CGCGGTCCTTTGGGCCCAGCAGGAGGCATTGGACTT...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGGAGTTAGAAGCTCATTaGATGGGGGTTCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWELEAH*MGVQGV
Trigger: CACCCCTTGAACCCCCATGCAATGAGCTTCTAACTC...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGAGGACGAGGGGTTTCTaGTTCACCCTGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRRTRGF*FTLGSH
Trigger: GTGGCTCCCCAGGGTGAACCAGAAACCCCTCGTCCT...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCTCTCCTTTCAGACCTaGATGCCCGGGGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDLSFQT*MPGETH
Trigger: GTGGGTCTCCCCGGGCATCCAGGTCTGAAAGGAGAG...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGCTCTCCACGGGAACCTaGTGGTCCCCGCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGLSTGT*WSPLSF
Trigger: GAAGGAGAGCGGGGACCACCAGGTTCCCGTGGAGAG...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCCCTGGTTGTCCAGGTaGGCCCGCGTCTCCTTTATC +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDPWLSR*ARVSFI
Trigger: GATAAAGGAGACGCGGGCCCACCTGGACAACCAGGG...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGGGGTCCCTGCACGCCTaGCAACCCCTGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGGSLHA*QPLISF
Trigger: AAAGGAGATCAGGGGTTGCCAGGCGTGCAGGGACCC...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATACAGCTCCTCTCCATTaGTGCCAAGGAAGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDTAPLH*CQGSGR
Trigger: CCGCCCGCTTCCTTGGCACCAATGGAGAGGAGCTGT...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGCCCAAAACAGGGGGCTaGGCTTCACAGTCAGCTACC +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRPKTGG*ASQSAT
Trigger: GGTAGCTGACTGTGAAGCTCAGCCCCCTGTTTTGGG...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGGCCAGGAAGTCCAATaGCTCCTGCTGGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGGQEVQ*LLLGPK
Trigger: CTTTGGGCCCAGCAGGAGGCATTGGACTTCCTGGCC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGCCGTCATCTCCTTTCTaGCCAAAGAGGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRPSSPF*PKRPGG
Trigger: ACCCCCAGGCCTCTTTGGGCAGAAAGGAGATGACGG...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGTTGAGATGCAAATTATaGCCTATGGCCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWLRCKL*PMAWRW
Trigger: CCACCGCCAGGCCATAGGGCATAATTTGCATCTCAA...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATCTTCTTCATCCTCCCTaGCTGCCTTGGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADLLHPP*LPWSPG
Trigger: CCCTGGAGACCAAGGCAGCCAGGGAGGATGAAGAAG...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATTTTCCCAAGGGGTCCTaGTGGTCCCAGTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADFPKGS*WSQFPL
Trigger: AAGGGGGAACTGGGACCACCAGGACCCCTTGGGAAA...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGGCCCTTTTCCCCCTTaGGGCCAGTGTCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGGPFPP*GQCLPS
Trigger: TGAAGGGAGACACTGGCCCCAAGGGGGAAAAGGGCC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAAAATGCACCCCATTCTaGGGCTCCCTCATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAKCTPF*GSLMVP
Trigger: AGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTT...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGCTGCAGTATGCCACCTaGAATGGGGTGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGLQYAT*NGVRGG
Trigger: GCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAG...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAGGTCCCCAAACCACCTaGCATGGCAAGGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQGPQTT*HGKVSL
Trigger: CAGGCTCACCTTGCCATGCCAGGTGGTTTGGGGACC...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATTCTCCTGTCTTTCCCTaGGGGCCTAAGACACCAGCT +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADSPVFP*GPKTPA
Trigger: AGCTGGTGTCTTAGGCCCTCAGGGAAAGACAGGAGA...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGCTGGCCAATTCTGAATaGCCGGTCACCCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRLANSE*PVTLWS
Trigger: ACTCCAGAGGGTGACCGGGCATTCAGAATTGGCCAG...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGTCCCTCGACGGAATGTaGTATACCAGCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGSLDGM*YTSLQA
Trigger: AGCCTGGAGGCTGGTATAGCACATTCCGTCGAGGGA...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTCCAGCCAGGCAGCTaGATTCTGGCAGGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGVQPGS*ILAGVG
Trigger: ACCTACTCCTGCCAGAATGCAGCTGCCTGGCTGGAC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGACGCTGACAGTGGCTaGTGTCGTCTGGTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEADADSG*CRLVER
Trigger: TCTTTCAACCAGACGACAGCAGCCACTGTCAGCGTC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGGCAGCCTGAGGATCTaGGCTTATCAGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGGSLRI*AYQQLL
Trigger: CAGGAGCTGCTGATAAGCCCAGATCCTCAGGCTGCC...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGGTCGGAGGCAGATTTaGAGCTGGAGTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAGRRQI*SWSLCL
Trigger: AAGACAGAGACTCCAGCTCCAAATCTGCCTCCGACC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGCTGTCCAGGGTGCCCTaGTCGCCCATCTTTACCTTG +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGLSRVP*SPIFTL
Trigger: CAAGGTAAAGATGGGCGACCAGGGCACCCTGGACAG...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCCTTCGCTGCCACTTTaGCCAGGAAGTCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDPSLPL*PGSPMP
Trigger: AGGCATTGGACTTCCTGGCCAAAGTGGCAGCGAAGG...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAACCTTCTCGACCCATGTaGCCTGAAGGACCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQPSRPM*PEGPLL
Trigger: CAAGAGGGGTCCTTCAGGCCACATGGGTCGAGAAGG...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGCCGATCAATCCAATGTaGCCCTTTTCCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRPINPM*PFSPLG
Trigger: CCCCAAGGGGGAAAAGGGCCACATTGGATTGATCGG...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATCAGCCCCCAGCACCCTaGAAAGGAGAAGGAATGACT +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADQPPAP*KGEGMT
Trigger: AGTCATTCCTTCTCCTTTCCAGGGTGCTGGGGGCTG...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAGCTGTCCCCGCAAGGTaGTCAGCAAGGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQAVPAR*SARRSS
Trigger: AGAACTTCTCCTTGCTGATCACCTTGCGGGGACAGC...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCACTTATCAGCAGCTCCTaGATGTCTCCCTCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: QAWAGISHHIPAFPKEEALISSS*MSPSKV
Trigger: GACTTTCGAGGGAGACATTCAGGAGCTGCTGATAAG...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGCTGCTGTCGTCTGGTTaGAAGACAGCTCCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGLLSSG*KTAPLH
Trigger: ATGGAGAGGAGCTGTCTTTCAACCAGACGACAGCAG...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGAGATGGATATTCTGCTaGCCGGAAGTCAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRRWIFC*PEVRAH
Trigger: ATGGGCCCTGACTTCCGGGCAGCAGAATATCCATCT...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATTCAGGAGACATCCAGTaGTTAACTCTGGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADSGDIQ*LTLGRG
Trigger: ACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGA...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATAGGAAAGTGGCCTTCTaGAAAGAGTTCCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADRKVAF*KEFPRG
Trigger: CCCACGTGGGAACTCTTTCCAGAAGGCCACTTTCCT...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAGACAGACTGATTGGCTaGCTGTCCCCGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQDRLIG*LSPQGD
Trigger: ATCACCTTGCGGGGACAGCCAGCCAATCAGTCTGTC...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATATGTCAGTGGAGGTCTaGTTCTCTGCGGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADMSVEV*FSAESG
Trigger: TCCTGACTCCGCAGAGAACCAGACCTCCACTGACAT...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGAGTTCTGGCGAGCTGTaGCACTCAGCAGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRSSGEL*HSAVSG
Trigger: TCCTGAAACTGCTGAGTGCCACAGCTCGCCAGAACT...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAACCGCTCGAGAAGAGCTaGATTCGAAAAGGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQPLEKS*IRKGSS
Trigger: CGAAGACCCTTTTCGAATTCAGCTCTTCTCGAGCGG...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGCCTTGTTCTTTTTCCTaGCCTTCCCCTTGCGACCTC +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGPCSFS*PSPCDL
Trigger: GAGGTCGCAAGGGGAAGGGCAGGAAAAAGAACAAGG...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATGGAGGTCCCTCAAACTaGTGCCCCTTTTCAATCACT +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADGGPSN*CPFSIT
Trigger: AGTGATTGAAAAGGGGCAGCAGTTTGAGGGACCTCC...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAGTGGCTGCTGTCGTCTaGTTGAAAGACAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQVAAVV*LKDSSS
Trigger: AGAGGAGCTGTCTTTCAACCAGACGACAGCAGCCAC...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGAACTTTTGGTTCGTCTaGCCAAAGTCAGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGNFWFV*PKSVAA
Trigger: GGCGGCCACTGACTTTGGCCAGACGAACCAAAAGTT...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGGTCAGGAGGTGGACTTaGGGTCCAAATTTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGVRRWT*GPNFLV
Trigger: AACAAGGAAATTTGGACCTCAAGTCCACCTCCTGAC...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTTTTGTTCATCAGCTCTaGGTTAGAAGCTCATTGCAT +
Preference number: 4 (lower is better)
Translates to: VASKPQHQMHPILGLPHGFVHQL*VRSSLH
Trigger: ATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAA...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR GCA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATTTTAAAGGAGCCGCCTaGAAACTGGAACGGCATCAT +
Preference number: 4 (lower is better)
Translates to: AWAGISHHIPAFPKEEADFKGAA*KLERHH
Trigger: ATGATGCCGTTCCAGTTTGCAGGCGGCTCCTTTAAA...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGCTCCAGGCTTTTCCTTaGACCAGGAGGCCAATTTCA +
Preference number: 4 (lower is better)
Translates to: GLLFISSELEAHCMGVQGLQAFP*TRRPIS
Trigger: TGAAATTGGCCTCCTGGTCCAAGGAAAAGCCTGGAG...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR TCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGGGAAAGATCTGGAACTaGGTCCGAGATGGATATTCT +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGGKIWN*VRDGYS
Trigger: AGAATATCCATCTCGGACTCAGTTCCAGATCTTTCC...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATAAGTTCTCAGGAAAGTaGCCTTCTGGAAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDKFSGK*PSGKSS
Trigger: GGAACTCTTTCCAGAAGGCCACTTTCCTGAGAACTT...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGCCCTTTCATCATAAATaGACAGCAGGACAGACTGAT +
Preference number: 4 (lower is better)
Translates to: LFISSELEAHCMGVQGVGPFHHK*TAGQTD
Trigger: ATCAGTCTGTCCTGCTGTCCATTTATGATGAAAGGG...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CCA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAATCAAACCCAAACTTTTaGTTCGTCTGGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQSNPNF*FVWPKS
Trigger: TGACTTTGGCCAGACGAACCAAAAGTTTGGGTTTGA...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp AGAAGCTGCAGCGCGGCCAGGAGCAGGCAGAGACCGGCCCGCGGCTaGCCCAGGTCCCGGCGGTTCCCCATCCCGGCGGGGCCCACGGGC +
Preference number: 5 (lower is better)
Translates to: RSCSAARSRQRPARG*PRSRRFPIPAGPTG
Trigger: GCCCGTGGGCCCCGCCGGGATGGGGAACCGCCGGGACCTGGGCCAGCCGCGGGCCGGTCTCTGCCTGCTCCTGGCCGCGCTGCAGCTTCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp CAGTATTCCCCATCAGGCAGGTGCGGGTGGTTGCGGTGCAGCTCGTaGCACACGAGGCCCGGGCGCTCCGCAGTGCCGGGAGGACGCCGC +
Preference number: 5 (lower is better)
Translates to: QYSPSGRCGWLRCSS*HTRPGRSAVPGGRR
Trigger: GCGGCGTCCTCCCGGCACTGCGGAGCGCCCGGGCCTCGTGTGCCACGAGCTGCACCGCAACCACCCGCACCTGCCTGATGGGGAATACTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp CAATTCCAGTCACACCCGGGCGACCCGTGGGGCCAGGAGAGCCTCTaGGGCCAAGCAGTCCTCGTGGACCCGGCTCCCCAGCCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: QFQSHPGDPWGQESL*GQAVLVDPAPQPGQ
Trigger: CTGGCCAGGCTGGGGAGCCGGGTCCACGAGGACTGCTTGGCCCCAGAGGCTCTCCTGGCCCCACGGGTCGCCCGGGTGTGACTGGAATTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 90 bp GGGTCAATCCAGTATTCCCCATCAGGCAGGTGCGGGTGGTTGCGGTaGAGCTCGTGGCACACGAGGCCCGGGCGCTCCGCAGTGCCGGGA +
Preference number: 5 (lower is better)
Translates to: GSIQYSPSGRCGWLR*SSWHTRPGRSAVPG
Trigger: TCCCGGCACTGCGGAGCGCCCGGGCCTCGTGTGCCACGAGCTGCACCGCAACCACCCGCACCTGCCTGATGGGGAATACTGGATTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 90 bp AACGGGGCCTTCGCTGCCACTTTGGCCAGGAAGTCCAATGCCTCCTaGTGGGCCCAAAGGACCGCGCTCACCAGGGGAGCCATTGGCCCC +
Preference number: 5 (lower is better)
Translates to: NGAFAATLARKSNAS*WAQRTALTRGAIGP
Trigger: GGGGCCAATGGCTCCCCTGGTGAGCGCGGTCCTTTGGGCCCAGCAGGAGGCATTGGACTTCCTGGCCAAAGTGGCAGCGAAGGCCCCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 90 bp CAGGGCCAACGGGGCCTTCGCTGCCACTTTGGCCAGGAAGTCCAATaGCTCCTGCTGGGCCCAAAGGACCGCGCTCACCAGGGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: QGQRGLRCHFGQEVQ*LLLGPKDRAHQGSH
Trigger: ATGGCTCCCCTGGTGAGCGCGGTCCTTTGGGCCCAGCAGGAGGCATTGGACTTCCTGGCCAAAGTGGCAGCGAAGGCCCCGTTGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCCCCCGGGACCCCTTCTaGCCTGCAGGGCCAACGGGG +
Preference number: 5 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPPRDPF*PAGPTG
Trigger: CCCCGTTGGCCCTGCAGGCAAGAAGGGGTCCCGGGG...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 90 bp TTCCCACGTGGGGATGCCGAGCGTGCTGGCCTGGCCAATTCTGAATaGCCGGTCACCCTCTGGAGTCCTCTGGGGACAGAAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FPRGDAERAGLANSE*PVTLWSPLGTEARP
Trigger: GGGCCTGGCTTCTGTCCCCAGAGGACTCCAGAGGGTGACCGGGCATTCAGAATTGGCCAGGCCAGCACGCTCGGCATCCCCACGTGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp GGAGCCGCCTGCAAACTGGAACGGCATCATGATCACAGTGCCCGGTaGGCCTCGGATCCCATCAATGCCGGGGATTCCTGGGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GAACKLERHHDHSAR*ASDPINAGDSWEAS
Trigger: GCTGGCCTCCCAGGAATCCCCGGCATTGATGGGATCCGAGGCCCACCGGGCACTGTGATCATGATGCCGTTCCAGTTTGCAGGCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CCCAGCCTGGGATCAGGAGACATCCAGTGCTTAACTCTGGGGAGGGGTAGCACCTGGCCCACATCGCCCTaGGGGCCTGGTTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: PSLGSGDIQCLTLGRGSTWPTSP*GPGCPV
Trigger: CACAGGGCAACCAGGCCCCAAGGGCGATGTGGGCCA...GGTGCTACCCCTCCCCAGAGTTAAGCACTGGATGTCTCCTGATCCCAGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTTCACCAGGGGAGCCATaGGCCCCCACGGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: VASKPQHQMHPILGLPHGSPGEP*APTGPG
Trigger: CCCAGGGCCCGTGGGGGCCAATGGCTCCCCTGGTGA...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGGGCAGGTGCGGGTGGTaGCGGTGCAGCTCGTGGCAC +
Preference number: 5 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLGRCGW*RCSSWH
Trigger: GTGCCACGAGCTGCACCGCAACCACCCGCACCTGCC...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS TCA 90 bp AGAGTTCCCACGTGGGGATGCCGAGCGTGCTGGCCTGGCCAATTCTaGATGCCCGGTCACCCTCTGGAGTCCTCTGGGGACAGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: RVPTWGCRACWPGQF*MPGHPLESSGDRSQ
Trigger: CTGGCTTCTGTCCCCAGAGGACTCCAGAGGGTGACCGGGCATTCAGAATTGGCCAGGCCAGCACGCTCGGCATCCCCACGTGGGAACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 90 bp CCTGGCCTGGACCACCACAGTGACCTCATCCCACAAAAGATTCCCTaGATACTCACCGCCACACCTGGGGGCCCAGGGTGGCCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PGLDHHSDLIPQKIP*ILTATPGGPGWPRE
Trigger: CTCTCTGGGCCACCCTGGGCCCCCAGGTGTGGCGGTGAGTATGCAGGGAATCTTTTGTGGGATGAGGTCACTGTGGTGGTCCAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461214.1
CDS CCA 90 bp AGCCGGCAGCCATCCTGGGGGACGCTGACAGTGGCTGCTGTCGTCTaGTTGAAAGACAGCTCCTCTCCATTGGTGCCAAGGAAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: SRQPSWGTLTVAAVV*LKDSSSPLVPRKRA
Trigger: CGCCCGCTTCCTTGGCACCAATGGAGAGGAGCTGTCTTTCAACCAGACGACAGCAGCCACTGTCAGCGTCCCCCAGGATGGCTGCCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCCCCTGGAGGCCCCGGTaGCCTGAAGTGCCCTTCACT +
Preference number: 5 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPPWRPR*PEVPFT
Trigger: AGTGAAGGGCACTTCAGGCAACCGGGGCCTCCAGGG...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp CCTTCTGGAAAGAGTTCCCACGTGGGGATGCCGAGCGTGCTGGCCTaGCCAATTCTGAATGCCCGGTCACCCTCTGGAGTCCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PSGKSSHVGMPSVLA*PILNARSPSGVLWG
Trigger: TCCCCAGAGGACTCCAGAGGGTGACCGGGCATTCAGAATTGGCCAGGCCAGCACGCTCGGCATCCCCACGTGGGAACTCTTTCCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGCCTGGCACCCCAAGCTaGCCCTTCTCCCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLPGTPS*PFSPAE
Trigger: CTCAGCTGGGGAGAAGGGCAAGCTTGGGGTGCCAGG...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 90 bp TCCTTTCCGGAGCCGGCAGCCATCCTGGGGGACGCTGACAGTGGCTaGTGTCGTCTGGTTGAAAGACAGCTCCTCTCCATTGGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: SFPEPAAILGDADSG*CRLVERQLLSIGAK
Trigger: CTTGGCACCAATGGAGAGGAGCTGTCTTTCAACCAGACGACAGCAGCCACTGTCAGCGTCCCCCAGGATGGCTGCCGGCTCCGGAAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTCCCTCCCTTCCTGCCCTTCCCCTaGCGACCTCGCCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: QSLSTKCTPFWGSLMVPPFLPFP*RPRPFF
Trigger: GAAGAAAGGGCGAGGTCGCAAGGGGAAGGGCAGGAA...GGGAGGGACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGTCCTGGGGGACCGGGTaGCCCCACATGGCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWSWGTG*PHMAKV
Trigger: GACTTTGGCCATGTGGGGCAACCCGGTCCCCCAGGA...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS TCA 90 bp TGGCCGCCACATCCCACAGGGGCAGAAATCCCGCTCGAGAAGAGCTaGATTCGAAAAGGGTCTTCGTCTGTCCTTTCCGGAGCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: WPPHPTGAEIPLEKS*IRKGSSSVLSGAGS
Trigger: GCTGCCGGCTCCGGAAAGGACAGACGAAGACCCTTTTCGAATTCAGCTCTTCTCGAGCGGGATTTCTGCCCCTGTGGGATGTGGCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGCCAGGGCGGCCCATCTaGCCCACTCGGCCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: GLLFISSELEAHCMGVQGPGRPI*PTRPGG
Trigger: ACCCCCTGGCCGAGTGGGCAAGATGGGCCGCCCTGG...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATCCCTGTGGCACCCGGTaGCCCCCTCTCTCCACGGGA +
Preference number: 5 (lower is better)
Translates to: AWAGISHHIPAFPKEEADPCGTR*PPLSTG
Trigger: TCCCGTGGAGAGAGGGGGCAACCGGGTGCCACAGGG...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGTGACAGCTCCTCTCCATaGGTGCCAAGGAAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: VASKPQHQMHPILGLPHGDSSSP*VPRKRA
Trigger: CGCCCGCTTCCTTGGCACCAATGGAGAGGAGCTGTC...ACCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp CACAGTGGAGGTGACGACCAAAGGCGTGGGGGTCGGAGGCAGATTTaGAGCTGGAGTCTCTGTCTTGGGGATGTCAGTGGAGGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: HSGGDDQRRGGRRQI*SWSLCLGDVSGGLV
Trigger: AACCAGACCTCCACTGACATCCCCAAGACAGAGACTCCAGCTCCAAATCTGCCTCCGACCCCCACGCCTTTGGTCGTCACCTCCACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGCTGCCGGTGCCAGGTaGTCACAGTCGGGGAGGTAC +
Preference number: 5 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAAAGAR*SQSGRY
Trigger: GTACCTCCCCGACTGTGACAACCTGGCACCGGCAGC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAGCCCTTGGGGCCTGGTaGCCCTGTGGCACCCGGTTG +
Preference number: 5 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQALGAW*PCGTRL
Trigger: CAACCGGGTGCCACAGGGCAACCAGGCCCCAAGGGC...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGACCCCGTATCCCTGGTaGTCCAGGTGGGCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRTPYPW*SRWARV
Trigger: GACGCGGGCCCACCTGGACAACCAGGGATACGGGGT...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATGGGCCCACGCTCCCTTaGGCTCCATCCTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PLPSVVRPQSFHRGSRKDGPTLP*APSSPG
Trigger: CCCTGGAGAGGATGGAGCCAAAGGGAGCGTGGGCCC...ATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp GGCCCAGTTCAAACCCAAACTTTTGGTTCGTCTGGCCAAAGTCAGTaGCCGCCACATCCCACAGGGGCAGAAATCCCGCTCGAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GPVQTQTFGSSGQSQ*PPHPTGAEIPLEKS
Trigger: GCTCTTCTCGAGCGGGATTTCTGCCCCTGTGGGATGTGGCGGCCACTGACTTTGGCCAGACGAACCAAAAGTTTGGGTTTGAACTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGCTGCCATCTGTGAGGTaGACCTGCTGGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LFISSELEAHCMGVQGVGLPSVR*TCWGRG
Trigger: CCCCCTCCCCCAGCAGGTCAACCTCACAGATGGCAG...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGAGCCCCACATCGCCCTaGAAGCCTGGGAAGCCGTCC +
Preference number: 5 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRSPTSP*KPGKPS
Trigger: GGACGGCTTCCCAGGCTTCAAGGGCGATGTGGGGCT...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGCACCCACATCCCCCTaGTCCCCTTCCTCGCCAGAA +
Preference number: 5 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAAPTSP*SPSSPE
Trigger: TTCTGGCGAGGAAGGGGACAAGGGGGATGTGGGTGC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGATTCACCAATGTCTCCCTaGGGCCCCGGGATGCCTGGG +
Preference number: 5 (lower is better)
Translates to: AWAGISHHIPAFPKEEADSPMSP*GPGMPG
Trigger: CCCAGGCATCCCGGGGCCCAAGGGAGACATTGGTGA...ATCTGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GGTGGCTTCAAAGCCTCAGCACCAAATGCACCCCATTCTGGGGCTCCCTCATGGACCCCGGAGACCCTTTaGAGCCTTTCTGTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: GGFKASAPNAPHSGAPSWTPETL*SLSVLE
Trigger: CTCTAGGACAGAAAGGCTCAAAAGGGTCTCCGGGGT...CCATGAGGGAGCCCCAGAATGGGGTGCATTTGGTGCTGAGGCTTTGAAGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGCCAAAGTCACCCCTTaGGCCCTTCTCACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAAKVTP*ALLTRQ
Trigger: CTGCCTGGTGAGAAGGGCCAAAGGGGTGACTTTGGC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGCCTTCGCTGCCACTTaGGCCAGGAAGTCCAATGCC +
Preference number: 5 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAAFAAT*ARKSNA
Trigger: GGCATTGGACTTCCTGGCCAAAGTGGCAGCGAAGGC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp TTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGGTGGGGTCGCCTTTACTCCCCTaGTGTCCGGGGGCACCCACA +
Preference number: 5 (lower is better)
Translates to: LFISSELEAHCMGVQGVGSPLLP*CPGAPT
Trigger: TGTGGGTGCCCCCGGACACAAGGGGAGTAAAGGCGA...CCCCACCCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAACCAGGGGGACCTTTCTaGCCTGGGGGTCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQPGGPF*PGGPAA
Trigger: AGCTGCTGGACCCCCAGGCAAGAAAGGTCCCCCTGG...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp ACTGAGTCCGAGATGGATATTCTGCTGCCCGGAAGTCAGGGCCCATaGTGGAATCATCTCCTTCTTCATCCTCCCTGGCTGCCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: TESEMDILLPGSQGP*WNHLLLHPPWLPWS
Trigger: AGACCAAGGCAGCCAGGGAGGATGAAGAAGGAGATGATTCCACCATGGGCCCTGACTTCCGGGCAGCAGAATATCCATCTCGGACTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS TCA 90 bp GGGCCCCTGGGAGAAGAGCAAGGGTCAGTTAGGGATTCTCAAATGTaGACTCGAGGTCTGTGTGGGTGGTTAGGGGATGGTCAAATGGGA +
Preference number: 5 (lower is better)
Translates to: GPLGEEQGSVRDSQM*TRGLCGWLGDGQMG
Trigger: TCCCATTTGACCATCCCCTAACCACCCACACAGACCTCGAGTTCACATTTGAGAATCCCTAACTGACCCTTGCTCTTCTCCCAGGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461214.1
CDS-3UTR CAA 90 bp GTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGTCTAGGATCGTGGCATaGAGTCCAGTAGTCACAGTG +
Preference number: 5 (lower is better)
Translates to: VKGSPSSLCSPTSVLSPWSRIVA*SPVVTV
Trigger: CACTGTGACTACTGGACTCAATGCCACGATCCTAGA...CCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAAAGGGGACCCACATTGCCTTaGGCACCAGGAGCACCATCA +
Preference number: 5 (lower is better)
Translates to: PSVVRPQSFHRGSRKDQRGPTLP*APGAPS
Trigger: TGATGGTGCTCCTGGTGCCAAAGGCAATGTGGGTCC...CCTTTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GGGCTTTTGTTCATCAGCTCTGAGTTAGAAGCTCATTGCATGGGGGTTCAAGGGCGGGCCTGTCTGACCTaGGAAGCCCAGTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GLLFISSELEAHCMGVQGRACLT*EAQFSS
Trigger: AGAGGAGAACTGGGCTTCCAAGGTCAGACAGGCCCG...CCCTTGAACCCCCATGCAATGAGCTTCTAACTCAGAGCTGATGAACAAAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CAGGCTTGGGCTGGAATCTCTCATCATATCCCAGCCTTCCCTAAGGAGGAAGCAGCTGCTGTCGTCTGGTaGAAAGACAGCTCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: QAWAGISHHIPAFPKEEAAAVVW*KDSSSP
Trigger: TGGAGAGGAGCTGTCTTTCAACCAGACGACAGCAGC...TGCTTCCTCCTTAGGGAAGGCTGGGATATGATGAGAGATTCCAGCCCAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 90 bp TCCAGCACCAGGAAAGATCTGGAACTGAGTCCGAGATGGATATTCTaGTGCCCGGAAGTCAGGGCCCATGGTGGAATCATCTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSTRKDLELSPRWIF*CPEVRAHGGIISFF
Trigger: GAAGAAGGAGATGATTCCACCATGGGCCCTGACTTCCGGGCAGCAGAATATCCATCTCGGACTCAGTTCCAGATCTTTCCTGGTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp TCCTTTCTCTCCAGCACCAGGAAAGATCTGGAACTGAGTCCGAGATaGATATTCTGCTGCCCGGAAGTCAGGGCCCATGGTGGAATCATC +
Preference number: 5 (lower is better)
Translates to: SFLSSTRKDLELSPR*IFCCPEVRAHGGII
Trigger: GATGATTCCACCATGGGCCCTGACTTCCGGGCAGCAGAATATCCATCTCGGACTCAGTTCCAGATCTTTCCTGGTGCTGGAGAGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp GGGAGAAAGAGCCAGACTGCAGTATGCCACCTGGAATGGGGTGAGAGGAGGCTGTTCAAACCCAAACTTTaGGTTCGTCTGGCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: GRKSQTAVCHLEWGERRLFKPKL*VRLAKV
Trigger: GACTTTGGCCAGACGAACCAAAAGTTTGGGTTTGAA...CAGCCTCCTCTCACCCCATTCCAGGTGGCATACTGCAGTCTGGCTCTTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS TCA 90 bp AAATGGACAGCAGGACAGACTGATTGGCTGGCTGTCCCCGCAAGGTaGTCAGCAAGGAGAAGTTCTCAGGAAAGTGGCCTTCTGGAAAGA +
Preference number: 5 (lower is better)
Translates to: KWTAGQTDWLAVPAR*SARRSSQESGLLER
Trigger: TCTTTCCAGAAGGCCACTTTCCTGAGAACTTCTCCTTGCTGATCACCTTGCGGGGACAGCCAGCCAATCAGTCTGTCCTGCTGTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGGAAGTAGAAAGGATCAACCTCCAGGCTTTTCCTaGGACCAGGAGGCCAATTTC +
Preference number: 5 (lower is better)
Translates to: LPSVVRPQSFHRGSRKDQPPGFS*DQEANF
Trigger: GAAATTGGCCTCCTGGTCCAAGGAAAAGCCTGGAGG...TTGATCCTTTCTACTTCCACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS-3UTR CAA 90 bp CAGTCAAGGGAAGTCCCTCTTCCCTCTGTAGTCCGACCTCAGTCCTTTCACCGTGAGGTCCAAATTTCCTaGTTCTTTTTCCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: QSREVPLPSVVRPQSFHREVQIS*FFFLPF
Trigger: GAAGGGCAGGAAAAAGAACAAGGAAATTTGGACCTC...ACGGTGAAAGGACTGAGGTCGGACTACAGAGGGAAGAGGGACTTCCCTTGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 90 bp GGATTCTCAAATGTGAACTCGAGGTCTGTGTGGGTGGTTAGGGGATaGTCAAATGGGAAATTATGCAGATTTCAAATGGGAATTACCAGG +
Preference number: 5 (lower is better)
Translates to: GFSNVNSRSVWVVRG*SNGKLCRFQMGITR
Trigger: CCTGGTAATTCCCATTTGAAATCTGCATAATTTCCCATTTGACCATCCCCTAACCACCCACACAGACCTCGAGTTCACATTTGAGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461214.1
CDS GCA 72 bp GGGCGGCTGCGGGGCGCGGCGACTTCTCGGGCTCGGTaGAGTCACTCGCGGCGGCCGCTCCTCTCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: GRLRGAATSRAR*SHSRRPLLSGS
Trigger: GGACCCTGAGAGGAGCGGCCGCCGCGAGTGACTGCACCGAGCCCGAGAAGTCGCCGCGCCCCGCAGCCGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp TCACACCCGGGCGACCCGTGGGGCCAGGAGAGCCTCTaGGGCCAAGCAGTCCTCGTGGACCCGGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: SHPGDPWGQESL*GQAVLVDPAPQ
Trigger: CTGGGGAGCCGGGTCCACGAGGACTGCTTGGCCCCAGAGGCTCTCCTGGCCCCACGGGTCGCCCGGGTGTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp CTCCTCCAGGCCGCCCTCCACGACTGGAAGCGGGACTaGGACGAAGCGCCGGCGCCTGCGCAGCCCATGCAG +
Preference number: 6 (lower is better)
Translates to: LLQAALHDWKRD*DEAPAPAQPMQ
Trigger: CTGCATGGGCTGCGCAGGCGCCGGCGCTTCGTCCCAGTCCCGCTTCCAGTCGTGGAGGGCGGCCTGGAGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp CCATCAGGCAGGTGCGGGTGGTTGCGGTGCAGCTCGTaGCACACGAGGCCCGGGCGCTCCGCAGTGCCGGGA +
Preference number: 6 (lower is better)
Translates to: PSGRCGWLRCSS*HTRPGRSAVPG
Trigger: TCCCGGCACTGCGGAGCGCCCGGGCCTCGTGTGCCACGAGCTGCACCGCAACCACCCGCACCTGCCTGATGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp CCTGGCCCACATCGCCCTTGGGGCCTGGTTGCCCTGTaGCACCCGGTTGCCCCCTCTCTCCACGGGAACCTG +
Preference number: 6 (lower is better)
Translates to: PGPHRPWGLVAL*HPVAPSLHGNL
Trigger: CAGGTTCCCGTGGAGAGAGGGGGCAACCGGGTGCCACAGGGCAACCAGGCCCCAAGGGCGATGTGGGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 72 bp CTTCACTCCCCGAGGTCCAGGATAGCCCGGAGGGCCTaGCGACCCTGGTGGACCCTGAGCCCCTTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: LHSPRSRIARRA*RPWWTLSPFLS
Trigger: GGAGAGAAAGGGGCTCAGGGTCCACCAGGGTCGGCAGGCCCTCCGGGCTATCCTGGACCTCGGGGAGTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp CGGGGGACCTGGGTGTCCTGCAGGACCCCGTATCCCTaGTTGTCCAGGTGGGCCCGCGTCTCCTTTATCGCC +
Preference number: 6 (lower is better)
Translates to: RGTWVSCRTPYP*LSRWARVSFIA
Trigger: GGCGATAAAGGAGACGCGGGCCCACCTGGACAACCAGGGATACGGGGTCCTGCAGGACACCCAGGTCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 90 bp GGACCCCTTCTTGCCTGCAGGGCCAACGGGGCCTTCGCTGCCACTTaGGCCAGGAAGTCCAATGCCTCCTGCTGGGCCCAAAGGACCGCG +
Preference number: 6 (lower is better)
Translates to: GPLLACRANGAFAAT*ARKSNASCWAQRTA
Trigger: CGCGGTCCTTTGGGCCCAGCAGGAGGCATTGGACTTCCTGGCCAAAGTGGCAGCGAAGGCCCCGTTGGCCCTGCAGGCAAGAAGGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 72 bp CGGGGCCTTCGCTGCCACTTTGGCCAGGAAGTCCAATaGCTCCTGCTGGGCCCAAAGGACCGCGCTCACCAG +
Preference number: 6 (lower is better)
Translates to: RGLRCHFGQEVQ*LLLGPKDRAHQ
Trigger: CTGGTGAGCGCGGTCCTTTGGGCCCAGCAGGAGGCATTGGACTTCCTGGCCAAAGTGGCAGCGAAGGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp GGGTCAATCCAGTATTCCCCATCAGGCAGGTGCGGGTaGTTGCGGTGCAGCTCGTGGCACACGAGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: GSIQYSPSGRCG*LRCSSWHTRPG
Trigger: CCCGGGCCTCGTGTGCCACGAGCTGCACCGCAACCACCCGCACCTGCCTGATGGGGAATACTGGATTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 72 bp TCAATCCAGTATTCCCCATCAGGCAGGTGCGGGTGGTaGCGGTGCAGCTCGTGGCACACGAGGCCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: SIQYSPSGRCGW*RCSSWHTRPGR
Trigger: GCGCCCGGGCCTCGTGTGCCACGAGCTGCACCGCAACCACCCGCACCTGCCTGATGGGGAATACTGGATTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS TCA 72 bp ACGTGGGGATGCCGAGCGTGCTGGCCTGGCCAATTCTaGATGCCCGGTCACCCTCTGGAGTCCTCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: TWGCRACWPGQF*MPGHPLESSGD
Trigger: GTCCCCAGAGGACTCCAGAGGGTGACCGGGCATTCAGAATTGGCCAGGCCAGCACGCTCGGCATCCCCACGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 72 bp TTCGCTGCCACTTTGGCCAGGAAGTCCAATGCCTCCTaGTGGGCCCAAAGGACCGCGCTCACCAGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: FAATLARKSNAS*WAQRTALTRGA
Trigger: GGCTCCCCTGGTGAGCGCGGTCCTTTGGGCCCAGCAGGAGGCATTGGACTTCCTGGCCAAAGTGGCAGCGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp TGCCAAGGAAGCGGGCGGAGTGGCTGTAGTCACCCGTaGCTTCGTCCAGCCAGGCAGCTGCATTCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: CQGSGRSGCSHP*LRPARQLHSGR
Trigger: CCTGCCAGAATGCAGCTGCCTGGCTGGACGAAGCCACGGGTGACTACAGCCACTCCGCCCGCTTCCTTGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 72 bp GGGGATGCCGAGCGTGCTGGCCTGGCCAATTCTGAATaGCCGGTCACCCTCTGGAGTCCTCTGGGGACAGAA +
Preference number: 6 (lower is better)
Translates to: GDAERAGLANSE*PVTLWSPLGTE
Trigger: TTCTGTCCCCAGAGGACTCCAGAGGGTGACCGGGCATTCAGAATTGGCCAGGCCAGCACGCTCGGCATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp GTCTTCGTCTGTCCTTTCCGGAGCCGGCAGCCATCCTaGGGGACGCTGACAGTGGCTGCTGTCGTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: VFVCPFRSRQPS*GTLTVAAVVWL
Trigger: CAACCAGACGACAGCAGCCACTGTCAGCGTCCCCCAGGATGGCTGCCGGCTCCGGAAAGGACAGACGAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 90 bp CGGCAGCCATCCTGGGGGACGCTGACAGTGGCTGCTGTCGTCTGGTaGAAAGACAGCTCCTCTCCATTGGTGCCAAGGAAGCGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: RQPSWGTLTVAAVVW*KDSSSPLVPRKRAE
Trigger: CTCCGCCCGCTTCCTTGGCACCAATGGAGAGGAGCTGTCTTTCAACCAGACGACAGCAGCCACTGTCAGCGTCCCCCAGGATGGCTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp AAGAGTTCCCACGTGGGGATGCCGAGCGTGCTGGCCTaGCCAATTCTGAATGCCCGGTCACCCTCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: KSSHVGMPSVLA*PILNARSPSGV
Trigger: GACTCCAGAGGGTGACCGGGCATTCAGAATTGGCCAGGCCAGCACGCTCGGCATCCCCACGTGGGAACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 72 bp GAGCCGGCAGCCATCCTGGGGGACGCTGACAGTGGCTaGTGTCGTCTGGTTGAAAGACAGCTCCTCTCCATT +
Preference number: 6 (lower is better)
Translates to: EPAAILGDADSG*CRLVERQLLSI
Trigger: AATGGAGAGGAGCTGTCTTTCAACCAGACGACAGCAGCCACTGTCAGCGTCCCCCAGGATGGCTGCCGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp CTGATCACCTTTGAGCCCCACATCGCCCTTGAAGCCTaGGAAGCCGTCCTCTCCCTTCTCGCCTTTCTCCCC +
Preference number: 6 (lower is better)
Translates to: LITFEPHIALEA*EAVLSLLAFLP
Trigger: GGGGAGAAAGGCGAGAAGGGAGAGGACGGCTTCCCAGGCTTCAAGGGCGATGTGGGGCTCAAAGGTGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp AATAGATCCCTTAGGTCCAGGGCGTCCTGGATAACCTaGGAGGCCTGGCACCCCAAGCTTGCCCTTCTCCCC +
Preference number: 6 (lower is better)
Translates to: NRSLRSRASWIT*EAWHPKLALLP
Trigger: GGGGAGAAGGGCAAGCTTGGGGTGCCAGGCCTCCCAGGTTATCCAGGACGCCCTGGACCTAAGGGATCTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp CCAGGCCCAACTGCCGGGCACCCCTTTCATCATAAATaGACAGCAGGACAGACTGATTGGCTGGCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: PGPTAGHPFHHK*TAGQTDWLAVP
Trigger: GGGGACAGCCAGCCAATCAGTCTGTCCTGCTGTCCATTTATGATGAAAGGGGTGCCCGGCAGTTGGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp TGCAAACTGGAACGGCATCATGATCACAGTGCCCGGTaGGCCTCGGATCCCATCAATGCCGGGGATTCCTGG +
Preference number: 6 (lower is better)
Translates to: CKLERHHDHSAR*ASDPINAGDSW
Trigger: CCAGGAATCCCCGGCATTGATGGGATCCGAGGCCCACCGGGCACTGTGATCATGATGCCGTTCCAGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp GGGAAATCCAATAGATCCCTTAGGTCCAGGGCGTCCTaGATAACCTGGGAGGCCTGGCACCCCAAGCTTGCC +
Preference number: 6 (lower is better)
Translates to: GKSNRSLRSRAS*ITWEAWHPKLA
Trigger: GGCAAGCTTGGGGTGCCAGGCCTCCCAGGTTATCCAGGACGCCCTGGACCTAAGGGATCTATTGGATTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp CCATCCTGGGGGACGCTGACAGTGGCTGCTGTCGTCTaGTTGAAAGACAGCTCCTCTCCATTGGTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: PSWGTLTVAAVV*LKDSSSPLVPR
Trigger: CCTTGGCACCAATGGAGAGGAGCTGTCTTTCAACCAGACGACAGCAGCCACTGTCAGCGTCCCCCAGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 90 bp CTCTCAGCTGCTGAAGCAGACGGGGCCCAGTTCAAACCCAAACTTTaGGTTCGTCTGGCCAAAGTCAGTGGCCGCCACATCCCACAGGGG +
Preference number: 6 (lower is better)
Translates to: LSAAEADGAQFKPKL*VRLAKVSGRHIPQG
Trigger: CCCCTGTGGGATGTGGCGGCCACTGACTTTGGCCAGACGAACCAAAAGTTTGGGTTTGAACTGGGCCCCGTCTGCTTCAGCAGCTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 72 bp TCCTGGGGGACGCTGACAGTGGCTGCTGTCGTCTGGTaGAAAGACAGCTCCTCTCCATTGGTGCCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: SWGTLTVAAVVW*KDSSSPLVPRK
Trigger: CTTCCTTGGCACCAATGGAGAGGAGCTGTCTTTCAACCAGACGACAGCAGCCACTGTCAGCGTCCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp CAAACCCAAACTTTTGGTTCGTCTGGCCAAAGTCAGTaGCCGCCACATCCCACAGGGGCAGAAATCCCGCTC +
Preference number: 6 (lower is better)
Translates to: QTQTFGSSGQSQ*PPHPTGAEIPL
Trigger: GAGCGGGATTTCTGCCCCTGTGGGATGTGGCGGCCACTGACTTTGGCCAGACGAACCAAAAGTTTGGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp CTGAAGCAGACGGGGCCCAGTTCAAACCCAAACTTTTaGTTCGTCTGGCCAAAGTCAGTGGCCGCCACATCC +
Preference number: 6 (lower is better)
Translates to: LKQTGPSSNPNF*FVWPKSVAATS
Trigger: GGATGTGGCGGCCACTGACTTTGGCCAGACGAACCAAAAGTTTGGGTTTGAACTGGGCCCCGTCTGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 72 bp GCTGAAGCAGACGGGGCCCAGTTCAAACCCAAACTTTaGGTTCGTCTGGCCAAAGTCAGTGGCCGCCACATC +
Preference number: 6 (lower is better)
Translates to: AEADGAQFKPKL*VRLAKVSGRHI
Trigger: GATGTGGCGGCCACTGACTTTGGCCAGACGAACCAAAAGTTTGGGTTTGAACTGGGCCCCGTCTGCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS TCA 72 bp GCAGGACAGACTGATTGGCTGGCTGTCCCCGCAAGGTaGTCAGCAAGGAGAAGTTCTCAGGAAAGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: AGQTDWLAVPAR*SARRSSQESGL
Trigger: AAGGCCACTTTCCTGAGAACTTCTCCTTGCTGATCACCTTGCGGGGACAGCCAGCCAATCAGTCTGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 72 bp CGTCCACGTAGGAGAACTTCTTCCCTCGACGGAATGTaGTATACCAGCCTCCAGGCTTTTCCTTGGACCAGG +
Preference number: 6 (lower is better)
Translates to: RPRRRTSSLDGM*YTSLQAFPWTR
Trigger: CCTGGTCCAAGGAAAAGCCTGGAGGCTGGTATAGCACATTCCGTCGAGGGAAGAAGTTCTCCTACGTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp TCCAGCACCAGGAAAGATCTGGAACTGAGTCCGAGATaGATATTCTGCTGCCCGGAAGTCAGGGCCCATGGT +
Preference number: 6 (lower is better)
Translates to: SSTRKDLELSPR*IFCCPEVRAHG
Trigger: ACCATGGGCCCTGACTTCCGGGCAGCAGAATATCCATCTCGGACTCAGTTCCAGATCTTTCCTGGTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS TCA 72 bp CATCCCACAGGGGCAGAAATCCCGCTCGAGAAGAGCTaGATTCGAAAAGGGTCTTCGTCTGTCCTTTCCGGA +
Preference number: 6 (lower is better)
Translates to: HPTGAEIPLEKS*IRKGSSSVLSG
Trigger: TCCGGAAAGGACAGACGAAGACCCTTTTCGAATTCAGCTCTTCTCGAGCGGGATTTCTGCCCCTGTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 72 bp CTGTCAGGGTCCAAGCTCCTCTCTAGGATCGTGGCATaGAGTCCAGTAGTCACAGTGGAGGTGACGACCAAA +
Preference number: 6 (lower is better)
Translates to: LSGSKLLSRIVA*SPVVTVEVTTK
Trigger: TTTGGTCGTCACCTCCACTGTGACTACTGGACTCAATGCCACGATCCTAGAGAGGAGCTTGGACCCTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 90 bp TGGTTCTCTGCGGAGTCAGGAGGTGGACTTGAGGTCCAAATTTCCTaGTTCTTTTTCCTGCCCTTCCCCTTGCGACCTCGCCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: WFSAESGGGLEVQIS*FFFLPFPLRPRPFF
Trigger: GAAGAAAGGGCGAGGTCGCAAGGGGAAGGGCAGGAAAAAGAACAAGGAAATTTGGACCTCAAGTCCACCTCCTGACTCCGCAGAGAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS GCA 72 bp AGGAAAGATCTGGAACTGAGTCCGAGATGGATATTCTaGTGCCCGGAAGTCAGGGCCCATGGTGGAATCATC +
Preference number: 6 (lower is better)
Translates to: RKDLELSPRWIF*CPEVRAHGGII
Trigger: GATGATTCCACCATGGGCCCTGACTTCCGGGCAGCAGAATATCCATCTCGGACTCAGTTCCAGATCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 72 bp CGACGGAATGTGCTATACCAGCCTCCAGGCTTTTCCTaGGACCAGGAGGCCAATTTCACGATCTCAAACTTC +
Preference number: 6 (lower is better)
Translates to: RRNVLYQPPGFS*DQEANFTISNF
Trigger: GAAGTTTGAGATCGTGAAATTGGCCTCCTGGTCCAAGGAAAAGCCTGGAGGCTGGTATAGCACATTCCGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CCA 72 bp TTCATCATAAATGGACAGCAGGACAGACTGATTGGCTaGCTGTCCCCGCAAGGTGATCAGCAAGGAGAAGTT +
Preference number: 6 (lower is better)
Translates to: FIINGQQDRLIG*LSPQGDQQGEV
Trigger: AACTTCTCCTTGCTGATCACCTTGCGGGGACAGCCAGCCAATCAGTCTGTCCTGCTGTCCATTTATGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264828.4
CDS CAA 72 bp TGTTTTAATGTCTCTGAAATCAGCTTCTTAACATCTTaGGCAAGTCATAGTTTACTTGGCAGAACTGTTTTC +
Preference number: 6 (lower is better)
Translates to: CFNVSEISFLTS*ASHSLLGRTVF
Trigger: GAAAACAGTTCTGCCAAGTAAACTATGACTTGCCAAAGATGTTAAGAAGCTGATTTCAGAGACATTAAAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461214.1