RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL5A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000204262

Ensembl transcript IDs: ENST00000374866.9, ENST00000470524.2, ENST00000618828.1, ENST00000649966.1

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCTCAGGATCAACTTCAAACAGTCAAAGTTCTTGTGAATGGCGGTaGTCATTGATGGTGGTGCTCATTGTCGATGTGTCTTGGCTTACT +
Preference number: 1 (lower is better)
Translates to: VSGSTSNSQSSCEWR*SLMVVLIVDVSWLT
Trigger: AGTAAGCCAAGACACATCGACAATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGAAGTTGATCCTGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR CCA 90 bp TCAAGAGTCTCAGGATCAACTTCAAACAGTCAAAGTTCTTGTGAATaGCGGTGGTCATTGATGGTGGTGCTCATTGTCGATGTGTCTTGG +
Preference number: 1 (lower is better)
Translates to: SRVSGSTSNSQSSCE*RWSLMVVLIVDVSW
Trigger: CCAAGACACATCGACAATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGAAGTTGATCCTGAGACTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR TCA 90 bp TACTTCAAGAGTCTCAGGATCAACTTCAAACAGTCAAAGTTCTTGTaGATGGCGGTGGTCATTGATGGTGGTGCTCATTGTCGATGTGTC +
Preference number: 1 (lower is better)
Translates to: YFKSLRINFKQSKFL*MAVVIDGGAHCRCV
Trigger: GACACATCGACAATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGAAGTTGATCCTGAGACTCTTGAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR TCA 90 bp CTGAAGGATAAGGAGGCCAGGCACTTAAGACCATATATACAATGCTaGTGCAGGATCAGCCATTACTTCAAGAGTCTCAGGATCAACTTC +
Preference number: 1 (lower is better)
Translates to: LKDKEARHLRPYIQC*CRISHYFKSLRINF
Trigger: GAAGTTGATCCTGAGACTCTTGAAGTAATGGCTGATCCTGCATCAGCATTGTATATATGGTCTTAAGTGCCTGGCCTCCTTATCCTTCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR TCA 90 bp GCAAGTATTACAAAGCATTCCAGATACAGTATGACAGAGGAACAGTaGACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGT +
Preference number: 1 (lower is better)
Translates to: ASITKHSRYSMTEEQ*TSIGTMLFLSETGS
Trigger: ACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCCTCTGTCATACTGTATCTGGAATGCTTTGTAATACTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR TCA 90 bp GGTCTAAGAAGCATGCAAGTATTACAAAGCATTCCAGATACAGTATaGCAGAGGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTT +
Preference number: 1 (lower is better)
Translates to: GLRSMQVLQSIPDTV*QRNSEQALERCSFF
Trigger: AAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCCTCTGTCATACTGTATCTGGAATGCTTTGTAATACTTGCATGCTTCTTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR CCA 90 bp TCCATCCCAGCTTCTAGAGATGAGGTAGCTCATGCTAAGAAATGTTaGGTCATTTTTCCTATGAAAGTTCAAAGGCCAAATGGTCTAATT +
Preference number: 1 (lower is better)
Translates to: SIPASRDEVAHAKKC*VIFPMKVQRPNGLI
Trigger: AATTAGACCATTTGGCCTTTGAACTTTCATAGGAAAAATGACCCAACATTTCTTAGCATGAGCTACCTCATCTCTAGAAGCTGGGATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCTTGTGAATGGCGGTaGTCATTGATGGTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSCEWR*SLMVVL
Trigger: GAGCACCACCATCAATGACCACCGCCATTCACAAGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCAGTCAAAGTTCTTGTaGATGGCGGTGGTCATTGAT +
Preference number: 2 (lower is better)
Translates to: YTPLFKLPARKKNFLINTQSKFL*MAVVID
Trigger: ATCAATGACCACCGCCATTCACAAGAACTTTGACTG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCAAAGTTCTTGTGAATaGCGGTGGTCATTGATGGTG +
Preference number: 2 (lower is better)
Translates to: YTPLFKLPARKKNFLINTQSSCE*RWSLMV
Trigger: CACCATCAATGACCACCGCCATTCACAAGAACTTTG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGCCTATCTCCAGTCTTaGAATAATAACAGAAGCATA +
Preference number: 2 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSAYLQS*NNNRSI
Trigger: TATGCTTCTGTTATTATTCCAAGACTGGAGATAGGC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCCATATATACAATGCTaGTGCAGGATCAGCCATTAC +
Preference number: 2 (lower is better)
Translates to: YTPLFKLPARKKNFLINTPYIQC*CRISHY
Trigger: GTAATGGCTGATCCTGCATCAGCATTGTATATATGG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTAATCAGTTTACTTTCTaGAAAGGTGGTCATTGTCAT +
Preference number: 2 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSNQFTF*KGGHCH
Trigger: ATGACAATGACCACCTTTGCAGAAAGTAAACTGATT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTATGAGATTGTACATGTaGAAGAGTCTCAATTTAGAG +
Preference number: 2 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSMRLYM*KSLNLE
Trigger: CTCTAAATTGAGACTCTTCCACATGTACAATCTCAT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGCATGGCTTGTCTTTTaGGATGGTCCCAGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKAWLVF*DGPSCL
Trigger: TAAACAGCTGGGACCATCCCAAAAGACAAGCCATGC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCAGTCAAAGTTCTTGTaGATGGCGGTGGTCATTGAT +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKQSKFL*MAVVID
Trigger: ATCAATGACCACCGCCATTCACAAGAACTTTGACTG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTTGACAATCTTGGAATaGGAGGTCACAAAAGGGCAC +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLTILE*EVTKGH
Trigger: GTGCCCTTTTGTGACCTCTCATTCCAAGATTGTCAA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGATGACAGAGGAACAGTaGACAAGCATTGGAACGATG +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKMTEEQ*TSIGTM
Trigger: CATCGTTCCAATGCTTGTTCACTGTTCCTCTGTCAT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCAAAGTTCTTGTGAATaGCGGTGGTCATTGATGGTG +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKQSSCE*RWSLMV
Trigger: CACCATCAATGACCACCGCCATTCACAAGAACTTTG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGGGACCTACATGTTCTaGTCTAAGAAGCATGCAAGT +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKGTYMF*SKKHAS
Trigger: ACTTGCATGCTTCTTAGACCAGAACATGTAGGTCCC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCAAGCATTGGAACGATaGTCTTTCTTTCAGAAACGG +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKQALER*SFFQKR
Trigger: CCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCCAATCATCACATTTaGTTAGAGTCAGCTCCACAA +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSNHHI*LESAPQ
Trigger: TTGTGGAGCTGACTCTAATCAAATGTGATGATTGGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGGGTCATTTTTCCTATaGAAGTTCAAAGGCCAAATG +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKGSFFL*KFKGQM
Trigger: CATTTGGCCTTTGAACTTTCATAGGAAAAATGACCC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGATTCCAGATACAGTATaGCAGAGGAACAGTGAACAA +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKIPDTV*QRNSEQ
Trigger: TTGTTCACTGTTCCTCTGTCATACTGTATCTGGAAT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTACTTTCTGCAAAGGTaGTCATTGTCATTGGTCATC +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKYFLQR*SLSLVI
Trigger: GATGACCAATGACAATGACCACCTTTGCAGAAAGTA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGACAGTGAACAAGCATTaGAACGATGCTCTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKTVNKH*NDALSF
Trigger: GAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGCTTGTCTTTTGGGATaGTCCCAGCTGTTTATTTTA +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKACLLG*SQLFIL
Trigger: TAAAATAAACAGCTGGGACCATCCCAAAAGACAAGC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGCCTATCTCCAGTCTTaGAATAATAACAGAAGCATA +
Preference number: 2 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKAYLQS*NNNRSI
Trigger: TATGCTTCTGTTATTATTCCAAGACTGGAGATAGGC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR TCA 72 bp AAGGAGGCCAGGCACTTAAGACCATATATACAATGCTaGTGCAGGATCAGCCATTACTTCAAGAGTCTCAGG +
Preference number: 3 (lower is better)
Translates to: KEARHLRPYIQC*CRISHYFKSLR
Trigger: CCTGAGACTCTTGAAGTAATGGCTGATCCTGCATCAGCATTGTATATATGGTCTTAAGTGCCTGGCCTCCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGAATGGCGGTGGTCATaGATGGTGGTGCTCATTGTC +
Preference number: 3 (lower is better)
Translates to: YTPLFKLPARKKNFLINTEWRWS*MVVLIV
Trigger: GACAATGAGCACCACCATCAATGACCACCGCCATTC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR TCA 72 bp AGTCTCAGGATCAACTTCAAACAGTCAAAGTTCTTGTaGATGGCGGTGGTCATTGATGGTGGTGCTCATTGT +
Preference number: 3 (lower is better)
Translates to: SLRINFKQSKFL*MAVVIDGGAHC
Trigger: ACAATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGAAGTTGATCCTGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR CCA 72 bp TCAACTTCAAACAGTCAAAGTTCTTGTGAATGGCGGTaGTCATTGATGGTGGTGCTCATTGTCGATGTGTCT +
Preference number: 3 (lower is better)
Translates to: STSNSQSSCEWR*SLMVVLIVDVS
Trigger: AGACACATCGACAATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGAAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR CCA 72 bp TCAGGATCAACTTCAAACAGTCAAAGTTCTTGTGAATaGCGGTGGTCATTGATGGTGGTGCTCATTGTCGAT +
Preference number: 3 (lower is better)
Translates to: SGSTSNSQSSCE*RWSLMVVLIVD
Trigger: ATCGACAATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGAAGTTGATCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR GCA 72 bp TTTGATGCTTTGCAGAGATACATGACCAAAGTTGTATaGATGGCTTGTCTTTTGGGATGGTCCCAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: FDALQRYMTKVV*MACLLGWSQLF
Trigger: AAACAGCTGGGACCATCCCAAAAGACAAGCCATGCATACAACTTTGGTCATGTATCTCTGCAAAGCATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTTCCAATCATCACATTaGATTAGAGTCAGCTCCACA +
Preference number: 3 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSFQSSH*IRVSST
Trigger: TGTGGAGCTGACTCTAATCAAATGTGATGATTGGAA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR TCA 72 bp AGCATGCAAGTATTACAAAGCATTCCAGATACAGTATaGCAGAGGAACAGTGAACAAGCATTGGAACGATGC +
Preference number: 3 (lower is better)
Translates to: SMQVLQSIPDTV*QRNSEQALERC
Trigger: GCATCGTTCCAATGCTTGTTCACTGTTCCTCTGTCATACTGTATCTGGAATGCTTTGTAATACTTGCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTGCATGGCTTGTCTTTaGGGATGGTCCCAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKCMACL*GWSQLF
Trigger: AAACAGCTGGGACCATCCCAAAAGACAAGCCATGCA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAGTTGTATGCATGGCTaGTCTTTTGGGATGGTCCCA +
Preference number: 3 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSCMHG*SFGMVP
Trigger: TGGGACCATCCCAAAAGACAAGCCATGCATACAACT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR CCA 72 bp TACTCTGACATTTTTAAGGGCAGAGGCAGTGATAATTaGTGTCATGTTGCCTTTGTGGGTAATGTTGTAGAT +
Preference number: 3 (lower is better)
Translates to: YSDIFKGRGSDN*CHVAFVGNVVD
Trigger: ATCTACAACATTACCCACAAAGGCAACATGACACCAATTATCACTGCCTCTGCCCTTAAAAATGTCAGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR CCA 72 bp TTCATTATAGGCTTCAGGATGATGAGATTGTACATGTaGAAGAGTCTCAATTTAGAGTCCTTGGACATATGT +
Preference number: 3 (lower is better)
Translates to: FIIGFRMMRLYM*KSLNLESLDIC
Trigger: ACATATGTCCAAGGACTCTAAATTGAGACTCTTCCACATGTACAATCTCATCATCCTGAAGCCTATAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGGCACCCTGAGAGCCTaGCAGACCTGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIGTLRA*QTCRPR
Trigger: CCTGGGCCTGCAGGTCTGCCAGGCTCTCAGGGTGCC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGGCACCCTGAGAGCCTaGCAGACCTGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSGTLRA*QTCRPR
Trigger: CCTGGGCCTGCAGGTCTGCCAGGCTCTCAGGGTGCC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCTCCCACACGCCCATaGGAGCCAGGGTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSPTRP*EPGSPR
Trigger: TCGTGGGGACCCTGGCTCTCATGGGCGTGTGGGAGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGGAGCCTGGAGGACCTaGACGGCCATCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSGAWRT*TAIFPW
Trigger: CCAGGGGAAGATGGCCGTCCAGGTCCTCCAGGCTCC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGGAGCCTGGAGGACCTaGACGGCCATCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIGAWRT*TAIFPW
Trigger: CCAGGGGAAGATGGCCGTCCAGGTCCTCCAGGCTCC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTAGCTCCAGCAGGGCCTaGAGGTCCAACTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISSSRA*RSNSAR
Trigger: GCGGGCAGAGTTGGACCTCCAGGCCCTGCTGGAGCT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGTCCCCACGAAGACCTaGAGGTCCCTCCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSVPTKT*RSLLPG
Trigger: CCCGGGAAGGAGGGACCTCCAGGTCTTCGTGGGGAC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTAGAGCAGCTGTAAGGTaGCCAGGGGGACCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSRAAVR*PGGPGG
Trigger: CCCTCCGGGTCCCCCTGGCCACCTTACAGCTGCTCT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGGACCCCGTTCTCCTTaGGCACCCTTTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSGPRSP*APFGPG
Trigger: ACCTGGGCCAAAGGGTGCTCAAGGAGAACGGGGTCC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCCCGGGCTGCCCTCTaGTTCCTATGGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISRAAL*FLWSLE
Trigger: CTCCAGGCTCCATAGGAATCAGAGGGCAGCCCGGGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGGACCAGGAAGCCCCTaGAAACCTGTGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIGPGSP*KPVGPG
Trigger: TCCAGGCCCCACAGGTTTTCAGGGGCTTCCTGGTCC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCTGGTAGGCCGGGCATaGCTCTCTCTCCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSLVGRA*LSLHVA
Trigger: GGCAACGTGGAGAGAGAGGCATGCCCGGCCTACCAG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCACGTGCGGGCTGGGTaGTTTTTCGAGCCATCGGGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIHVRAG*FFEPSG
Trigger: CCCCGATGGCTCGAAAAAGCACCCAGCCCGCACGTG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCCATCGGGTCCTGGGTaGGACGGATGTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIPSGPG*DGCPGG
Trigger: ACCTCCTGGACATCCGTCCCACCCAGGACCCGATGG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGGTCCCGCAGGTCCTaGAGCTCCAGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGSRRS*SSSRAW
Trigger: CCAGGCCCTGCTGGAGCTCCAGGACCTGCGGGACCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGCCCTCTGGTCCACGTaGACCAATCGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIALWST*TNRTHW
Trigger: CCAATGGGTCCGATTGGTTCACGTGGACCAGAGGGC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCCCATGCTCCCGGGCTaGCCTCTGATTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIPMLPG*PLIPME
Trigger: CTCCATAGGAATCAGAGGGCAGCCCGGGAGCATGGG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTAGGTCCTGCCGGTCCTaGACGACCACGTATGCCTGT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIRSCRS*TTTYAC
Trigger: ACAGGCATACGTGGTCGTCCAGGACCGGCAGGACCT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGTGACCCTTCAGACCTaGAAGACCAGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIVTLQT*KTRSPR
Trigger: CCTGGGGCTCCTGGTCTTCCAGGTCTGAAGGGTCAC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCACCCATTGGACCAGTaGGGCCAGCTTCACCCTTGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIHPLDQ*GQLHPW
Trigger: CCAAGGGTGAAGCTGGCCCCACTGGTCCAATGGGTG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCCAGGAGCACCCTGTaGCCCAAGTCTCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISRSTL*PKSPSL
Trigger: GAGAGAGGGAGACTTGGGCCACAGGGTGCTCCTGGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACCTGGAGAGCCCGTTaGGCCTTTGGCACCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTWRAR*AFGTRS
Trigger: ACTCCTGGTGCCAAAGGCCCAACGGGCTCTCCAGGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACGGCCATCTTCCCCTaGCGCACCCAAAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTAIFP*RTQRSK
Trigger: CTTGGACCTTTGGGTGCGCCAGGGGAAGATGGCCGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCACCACTGCTACCTTTaGGGCCTGGAAGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSHHCYL*GLEGPC
Trigger: GCATGGGCCTTCCAGGCCCCAAAGGTAGCAGTGGTG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGCCAGCTGGACCTTCTaGTCCAGGTTCCCCTACAGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSASWTF*SRFPYR
Trigger: CCTGTAGGGGAACCTGGACCAGAAGGTCCAGCTGGC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTTGTCCTGCATCTCCTaGAGCACCCACAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSLSCIS*STHRAR
Trigger: CCTGGCCCTGTGGGTGCTCCAGGAGATGCAGGACAA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTTGTCCTGCATCTCCTaGAGCACCCACAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILSCIS*STHRAR
Trigger: CCTGGCCCTGTGGGTGCTCCAGGAGATGCAGGACAA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCCCAGCTCGACCAGGTaGTCCTATAGGACCCCGAGA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIPSSTR*SYRTPR
Trigger: TCTCGGGGTCCTATAGGACCACCTGGTCGAGCTGGG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCCAGCTCGACCAGGTaGTCCTATAGGACCCCGAGA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPSSTR*SYRTPR
Trigger: TCTCGGGGTCCTATAGGACCACCTGGTCGAGCTGGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCCTGGGTCACCCATTaGACCAGTGGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSWVTH*TSGASF
Trigger: GAAGCTGGCCCCACTGGTCCAATGGGTGACCCAGGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCTCCATCAATTCCCTaGGGTCCACGAGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSPSIP*GPRGPG
Trigger: ACCTGGCCCTCGTGGACCTCAGGGAATTGATGGAGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCCAGCCATTTGAGCTaGAAACGGCCTGCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPSHLS*KRPAQA
Trigger: GGCTTGAGCAGGCCGTTTTCAGCTCAAATGGCTGGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGTTCCAGGGGCACCCTaGGAGCCTGGCAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTVPGAP*EPGRPA
Trigger: TGCAGGTCTGCCAGGCTCTCAGGGTGCCCCTGGAAC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCTCTGGGACCTCTTTTaGCTTCTTCACCGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSLWDLF*LLHRVG
Trigger: GCCCACCCGGTGAAGAAGGCAAAAGAGGTCCCAGAG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCCAGGAGCTCCCCTCTaGCCAGGAACTCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIPGAPL*PGTPAF
Trigger: AAATGCTGGAGTTCCTGGGCAGAGGGGAGCTCCTGG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCCATCTGGACCAGGTTaGCCATCTTCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIPSGPG*PSSPGS
Trigger: GGACCCAGGAGAAGATGGGCAACCTGGTCCAGATGG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCATCTGGACCAGGTTaGCCATCTTCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPSGPG*PSSPGS
Trigger: GGACCCAGGAGAAGATGGGCAACCTGGTCCAGATGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTAGCCCGTTGGGCCTTTaGCACCAGGAGTACCATCAG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSPLGL*HQEYHQ
Trigger: CTGATGGTACTCCTGGTGCCAAAGGCCCAACGGGCT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTAGGACCAGAGGTACCTaGAGAGCCCGTTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIRTRGT*RARWAF
Trigger: AAAGGCCCAACGGGCTCTCCAGGTACCTCTGGTCCT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGAAACCTGGAACTCCTaGATCACCCGGTTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIETWNS*ITRLAS
Trigger: CGAGGCCAACCGGGTGATCCAGGAGTTCCAGGTTTC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGATTCCTATGGAGCCTaGAGGACCTGGACGGCCATC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSDSYGA*RTWTAI
Trigger: GATGGCCGTCCAGGTCCTCCAGGCTCCATAGGAATC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGCCCCTGAAAACCTGTaGGGCCTGGAGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSAPENL*GLEVLV
Trigger: AACAAGGACCTCCAGGCCCCACAGGTTTTCAGGGGC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGGTCCCAGATGGACCTaGACTGCCTTTTGGGCCATC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSGPRWT*TAFWAI
Trigger: GATGGCCCAAAAGGCAGTCCAGGTCCATCTGGGACC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTGTCCGTCAGGACCCTaGGGTCCGGCAAAACCAACA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLICPSGP*GPAKPT
Trigger: TGTTGGTTTTGCCGGACCCCAGGGTCCTGACGGACA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGCACCAGGCGGACCTTaGGTTCCTCGACCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIAPGGP*VPRPPF
Trigger: AAAAGGTGGTCGAGGAACCCAAGGTCCGCCTGGTGC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAGCTCCAGCAGGGCCTaGAGGTCCAACTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSSSRA*RSNSAR
Trigger: GCGGGCAGAGTTGGACCTCCAGGCCCTGCTGGAGCT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGGGTCCCGCAGGTCCTaGAGCTCCAGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKGSRRS*SSSRAW
Trigger: CCAGGCCCTGCTGGAGCTCCAGGACCTGCGGGACCC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTGGTCCTACTTTTCCTaGTGTTCCCGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIWSYFS*CSRWAW
Trigger: CCAGGCCCAGCGGGAACACCAGGAAAAGTAGGACCA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTAGCACCATCCCGTCCTaGGGTACCATCATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISTIPS*GTIIAS
Trigger: GCTGGCAATGATGGTACCCCAGGACGGGATGGTGCT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACCTGGAGGTCCAATTaGCCCAAGTGGCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTWRSN*PKWPRV
Trigger: AACCCTGGGCCACTTGGGCCAATTGGACCTCCAGGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTACCTGGAGGTCCAATTaGCCCAAGTGGCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLITWRSN*PKWPRV
Trigger: AACCCTGGGCCACTTGGGCCAATTGGACCTCCAGGT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAGAGCAGCTGTAAGGTaGCCAGGGGGACCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTRAAVR*PGGPGG
Trigger: CCCTCCGGGTCCCCCTGGCCACCTTACAGCTGCTCT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCCAACCCAGCCATTTaGGCTGAAAACGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSNPAI*AENGLL
Trigger: GAGCAGGCCGTTTTCAGCTCAAATGGCTGGGTTGGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCTTTGTGTCCTCGGTaGCCCTTCAGACCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPLCPR*PFRPGR
Trigger: TCTTCCAGGTCTGAAGGGTCACCGAGGACACAAAGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGACCCCGTTCTCCTTaGGCACCCTTTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGPRSP*APFGPG
Trigger: ACCTGGGCCAAAGGGTGCTCAAGGAGAACGGGGTCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCCCGGGCTGCCCTCTaGTTCCTATGGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSRAAL*FLWSLE
Trigger: CTCCAGGCTCCATAGGAATCAGAGGGCAGCCCGGGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGACTTCAGGGTAGCATaGACCCCTGGGTCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSDFRVA*TPGSVL
Trigger: CAAAACGGACCCAGGGGTTCATGCTACCCTGAAGTC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTAGGTCCTGTAGGTCCTaGACCACCTTGCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSRSCRS*TTLLSL
Trigger: CAAGGACAGCAAGGTGGTGCAGGACCTACAGGACCT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTAGCTCCCGGAGATCCTaGAAATCCCACTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISSRRS*KSHFTR
Trigger: CCTGGTGAAGTGGGATTTGCAGGATCTCCGGGAGCT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCCAGGCATACCATGTaGACCTCGTTGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSRHTM*TSLSRS
Trigger: GCTCCTGGACAACGAGGTGCACATGGTATGCCTGGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCAACAATTCCTCTCTaGCCGGTCGTTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPTIPL*PVVPAG
Trigger: TCCAGCTGGAACGACCGGGCAGAGAGGAATTGTTGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCTGGGGTACCATCATTaGCAGCTGGACCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSLGYHH*QLDLLV
Trigger: GACCAGAAGGTCCAGCTGGCAATGATGGTACCCCAG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCTGGGGTACCATCATTaGCAGCTGGACCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILGYHH*QLDLLV
Trigger: GACCAGAAGGTCCAGCTGGCAATGATGGTACCCCAG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCTGCTTCTCCTACACTaGCTCGTACACCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSLLLLH*LVHLEV
Trigger: GACCTCCAGGTGTACGAGGCAGTGTAGGAGAAGCAG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCGAGCCATCGGGGCTaGGCATGGTTTCAATCTGAC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISSHRG*AWFQSD
Trigger: GTCAGATTGAAACCATGCGCAGCCCCGATGGCTCGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCGAGCCATCGGGGCTaGGCATGGTTTCAATCTGAC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSSHRG*AWFQSD
Trigger: GTCAGATTGAAACCATGCGCAGCCCCGATGGCTCGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCAAGCCATCGGGTCCTaGGTGGGACGGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTQAIGS*VGRMSR
Trigger: CCTGGACATCCGTCCCACCCAGGACCCGATGGCTTG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGGCCAGCTTCACCCTTaGAACCAGGTGCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSGQLHP*NQVLQL
Trigger: AAGTTGGAGCACCTGGTTCCAAGGGTGAAGCTGGCC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTAGGACCAACTGTTCCTaGGTCACCTCTGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSRTNCS*VTSGTS
Trigger: AGAGGTCCCAGAGGTGACCCAGGAACAGTTGGTCCT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAAGCCCAGGTTCCCCTaGACGTCCTGGATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTKPRFP*TSWIPL
Trigger: CAGGGGGATCCAGGACGTCCAGGGGAACCTGGGCTT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCAAACCCCGAGCACCTaGAAGCCCAGGTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTQTPST*KPRFPW
Trigger: CCAGGGGAACCTGGGCTTCCAGGTGCTCGGGGTTTG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACCTGGACTGCCTTTTaGGCCATCAGGACCATGTCC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTWTAF*AIRTMS
Trigger: GGACATGGTCCTGATGGCCCAAAAGGCAGTCCAGGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTACCTTGAAGACCTGGTaGGCCTGTATCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLITLKTW*ACISRG
Trigger: ACCCCTGGAGATACAGGCCCACCAGGTCTTCAAGGT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTAGGGCCCAAAGGACCTaGAAGACCTCTTGCACCATC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSRAQRT*KTSCTI
Trigger: GATGGTGCAAGAGGTCTTCCAGGTCCTTTGGGCCCT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACTGCCTCGTACACCTaGAGGTCCAATTGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTASYT*RSNWPK
Trigger: CTTGGGCCAATTGGACCTCCAGGTGTACGAGGCAGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTATCACACGTGCGGGCTaGGTGCTTTTTCGAGCCATC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSITRAG*VLFRAI
Trigger: GATGGCTCGAAAAAGCACCCAGCCCGCACGTGTGAT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCAACGCCGAATTCCTaGTCTGTGCCGCCAACATCC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSTPNS*SVPPTS
Trigger: GGATGTTGGCGGCACAGACCAGGAATTCGGCGTTGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGCCCTCTGGTCCACGTaGACCAATCGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTALWST*TNRTHW
Trigger: CCAATGGGTCCGATTGGTTCACGTGGACCAGAGGGC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGGCCTATCGGACCCTaGATACCATGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGPIGP*IPCGPG
Trigger: ACCAGGGCCACATGGTATTCAGGGTCCGATAGGCCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCTCCCACACGCCCATaGGAGCCAGGGTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSPTRP*EPGSPR
Trigger: TCGTGGGGACCCTGGCTCTCATGGGCGTGTGGGAGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGTTCCAGGGGCACCCTaGGAGCCTGGCAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKVPGAP*EPGRPA
Trigger: TGCAGGTCTGCCAGGCTCTCAGGGTGCCCCTGGAAC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCACCTCGGTCTCCATaGTCACCTTTGTCACCACGA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSPRSP*SPLSPR
Trigger: TCGTGGTGACAAAGGTGATCATGGAGACCGAGGTGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCATCATAGTGCCCCATaGTATCCCCAAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIHHSAP*YPQEQL
Trigger: CAGCTGCTCTTGGGGATATCATGGGGCACTATGATG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCATCATAGTGCCCCATaGTATCCCCAAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSHHSAP*YPQEQL
Trigger: CAGCTGCTCTTGGGGATATCATGGGGCACTATGATG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCAGGAGCAAGATCTATaGTGGGCAAGCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIQEQDL*WASVPH
Trigger: ATGTGGCACGCTTGCCCATCATAGATCTTGCTCCTG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTTCTCCAGTAGGACCTaGCGGACCTGGAGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTFSSRT*RTWRAQ
Trigger: TTGGGCCCTCCAGGTCCGGCAGGTCCTACTGGAGAA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCCTCTCTCTCCACGTTaGCCAGGCATGCCAACAATT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIPLSPR*PGMPTI
Trigger: AATTGTTGGCATGCCTGGGCAACGTGGAGAGAGAGG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTATCTCCTCTTTGTCCTaGATCTCCTGGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIISSLS*ISWSTH
Trigger: GTGGGTGCTCCAGGAGATGCAGGACAAAGAGGAGAT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAGGGCCCTCAGGTCCTaGTTCTCCTACACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTRALRS*FSYTAS
Trigger: CGAGGCAGTGTAGGAGAAGCAGGACCTGAGGGCCCT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTTAGGTCATCACACGTaGGGGCTGGGTGCTTTTTCG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILGHHT*GLGAFS
Trigger: CGAAAAAGCACCCAGCCCGCACGTGTGATGACCTAA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACCAATCGGACCCATTaGTCCAGGATCACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTNRTH*SRITRF
Trigger: GAACCTGGTGATCCTGGACCAATGGGTCCGATTGGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGTGACCCTTCAGACCTaGAAGACCAGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTVTLQT*KTRSPR
Trigger: CCTGGGGCTCCTGGTCTTCCAGGTCTGAAGGGTCAC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTACCCATGGCACCCATTaGACCAGTGGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTTHGTH*TSGASF
Trigger: GAAGCTGGCCCCACTGGTCCAATGGGTGCCATGGGT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCCAAGAGGACCCATTaGTCCAGGTTTTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPKRTH*SRFSRH
Trigger: ATGCCTGGAAAACCTGGACCAATGGGTCCTCTTGGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTACGGCCATCTTCCCCTaGCGCACCCAAAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTTAIFP*RTQRSK
Trigger: CTTGGACCTTTGGGTGCGCCAGGGGAAGATGGCCGT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGCTACCTTTGGGGCCTaGAAGGCCCATGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKATFGA*KAHAPG
Trigger: CCCGGGAGCATGGGCCTTCCAGGCCCCAAAGGTAGC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCACCACTGCTACCTTTaGGGCCTGGAAGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTHHCYL*GLEGPC
Trigger: GCATGGGCCTTCCAGGCCCCAAAGGTAGCAGTGGTG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTAAAACCTGTGGGGCCTaGAGGTCCTTGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIKTCGA*RSLFSS
Trigger: AGAGGAGAACAAGGACCTCCAGGCCCCACAGGTTTT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCATACCTTGAAGACCTaGTGGGCCTGTATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIHTLKT*WACISR
Trigger: CCTGGAGATACAGGCCCACCAGGTCTTCAAGGTATG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAGGACCTGCCGGACCTaGAGGGCCCAAAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKRTCRT*RAQRTW
Trigger: CCAGGTCCTTTGGGCCCTCCAGGTCCGGCAGGTCCT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGTCCCCACGAAGACCTaGAGGTCCCTCCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKVPTKT*RSLLPG
Trigger: CCCGGGAAGGAGGGACCTCCAGGTCTTCGTGGGGAC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTACCATCATTGCCAGCTaGACCTTCTGGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLITIIAS*TFWSRF
Trigger: GAACCTGGACCAGAAGGTCCAGCTGGCAATGATGGT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCCTTGTTCACCATTTaGACCAGGAGGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISLFTI*TRRARK
Trigger: CTTCCTGGCCCTCCTGGTCCAAATGGTGAACAAGGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACCTCTTGGGCCAAATaGTCCAGGGATTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTSWAK*SRDSST
Trigger: AGTGCTGGAATCCCTGGACCATTTGGCCCAAGAGGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCACAGACACAGATCTaGCAAGGGGCAGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISQTQI*QGAGFQ
Trigger: TTGGAAACCTGCCCCTTGTCAGATCTGTGTCTGTGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTACCTCCAGGTGTTTGTaGACAGACAGGACAGCATTC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLITSRCL*TDRTAF
Trigger: GAATGCTGTCCTGTCTGTTCACAAACACCTGGAGGT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGGACCAGGAAGCCCCTaGAAACCTGTGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKGPGSP*KPVGPG
Trigger: TCCAGGCCCCACAGGTTTTCAGGGGCTTCCTGGTCC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCTCCAGGAACACCTTaGTCACCTGGTTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISPGTP*SPGFPP
Trigger: AGGTGGAAAACCAGGTGATCAAGGTGTTCCTGGAGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCTCCCGGCATACCTTaGAGACCTGGTGGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSPGIP*RPGGPV
Trigger: TACAGGCCCACCAGGTCTTCAAGGTATGCCGGGAGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGGCCAGGAAGACCCTaGAGACCAGTAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGPGRP*RPVKPL
Trigger: CAGAGGCTTTACTGGTCTTCAGGGTCTTCCTGGCCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCATCAGGAGCCGCCTaGTCTTCAGTAAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSSGAA*SSVNSG
Trigger: TCCTGAGTTTACTGAAGATCAGGCGGCTCCTGATGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTAATGAGGAGAGGTCTTaGTTCCGCCCAGTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSNEERS*FRPVCH
Trigger: ATGGCAAACTGGGCGGAAGCAAGACCTCTCCTCATT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCTGGACGACCACGTATaGCTGTTACAACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILDDHV*LLQQAL
Trigger: TAGTGCCTGTTGTAACAGGCATACGTGGTCGTCCAG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACCCTTGGAACCAGGTaGTCCAACTTCACCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTLGTR*SNFTFR
Trigger: CCTAAAGGTGAAGTTGGAGCACCTGGTTCCAAGGGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCCCAGGGTCACCACTaGTACCTTTGGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSQGHH*YLWGLE
Trigger: TTCCAGGCCCCAAAGGTAGCAGTGGTGACCCTGGGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCACCTTTTTCTCCTATaGCACCTCTGTCACCCTTGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSHLFLL*HLCHPW
Trigger: CCAAGGGTGACAGAGGTGGCATAGGAGAAAAAGGTG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTGGTAGGCCGGGCATaGCTCTCTCTCCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLVGRA*LSLHVA
Trigger: GGCAACGTGGAGAGAGAGGCATGCCCGGCCTACCAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCAAGCCATCGGGTCCTaGGTGGGACGGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKQAIGS*VGRMSR
Trigger: CCTGGACATCCGTCCCACCCAGGACCCGATGGCTTG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAGAGCCAACTGGACCTaGGGGCCCAGTTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTRANWT*GPSFTS
Trigger: AGAGGTGAAACTGGGCCCCCAGGTCCAGTTGGCTCT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTTCTCCTTTGAAACCTaGAACTCCTGGATCACCCGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIFSFET*NSWITR
Trigger: CCGGGTGATCCAGGAGTTCCAGGTTTCAAAGGAGAA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAAGCCCAGGTTCCCCTaGACGTCCTGGATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKKPRFP*TSWIPL
Trigger: CAGGGGGATCCAGGACGTCCAGGGGAACCTGGGCTT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGCCCCTGAAAACCTGTaGGGCCTGGAGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTAPENL*GLEVLV
Trigger: AACAAGGACCTCCAGGCCCCACAGGTTTTCAGGGGC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCCAGGGGTCCCAGATaGACCTGGACTGCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSRGPR*TWTAFW
Trigger: CCAAAAGGCAGTCCAGGTCCATCTGGGACCCCTGGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTACCAACAGCTCCAGTTaGCCCATTTTCACCTCGAGA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLITNSSS*PIFTSR
Trigger: TCTCGAGGTGAAAATGGGCCAACTGGAGCTGTTGGT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAGCACCATCCCGTCCTaGGGTACCATCATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSTIPS*GTIIAS
Trigger: GCTGGCAATGATGGTACCCCAGGACGGGATGGTGCT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGCCTGGAGGACCTCTTaGGCCAAATGGTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTAWRTS*AKWSRD
Trigger: ATCCCTGGACCATTTGGCCCAAGAGGTCCTCCAGGC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGTTATTGTAGCACCATaGAGTCAGCTGTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIVIVAP*SQLWAL
Trigger: AAGAGCCCACAGCTGACTTCATGGTGCTACAATAAC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCGCATGGTTTCAATCTaGCTACTGAGTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSRMVSI*LLSDFR
Trigger: CCTGAAGTCACTCAGTAGTCAGATTGAAACCATGCG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCAGGATTTCCATTTCTaGCAGGTTCACCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIQDFHF*QVHHLP
Trigger: GGGAAGATGGTGAACCTGGCAGAAATGGAAATCCTG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCCCATGCTCCCGGGCTaGCCTCTGATTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKPMLPG*PLIPME
Trigger: CTCCATAGGAATCAGAGGGCAGCCCGGGAGCATGGG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACCTGGAAGACCTCTTaGACCATCATTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTWKTS*TIISSC
Trigger: ACAGCTGGAAATGATGGTGCAAGAGGTCTTCCAGGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTACCTGGAAGACCTCTTaGACCATCATTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLITWKTS*TIISSC
Trigger: ACAGCTGGAAATGATGGTGCAAGAGGTCTTCCAGGT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCTGGAGGTCCAACTCTaGCCGCAGAACCAGGAAATC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTLEVQL*PQNQEI
Trigger: GATTTCCTGGTTCTGCGGGCAGAGTTGGACCTCCAG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAGGGCCCTCAGGTCCTaGTTCTCCTACACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKRALRS*FSYTAS
Trigger: CGAGGCAGTGTAGGAGAAGCAGGACCTGAGGGCCCT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGAAGTGGATCTGGCATaGTTTCATCATAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIEVDLA*FHHSAP
Trigger: TGGGGCACTATGATGAAAGCATGCCAGATCCACTTC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCAGTATTCACCACTCTaGTTTGCGGAATGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIQYSPL*FAEWQS
Trigger: GCTTTGCCATTCCGCAAAGCAGAGTGGTGAATACTG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCAGTCCAGCACATCCTaGCATTCTATCTTGTCACAG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSQSSTS*HSILSQ
Trigger: CTGTGACAAGATAGAATGCCAGGATGTGCTGGACTG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAGGTCCTGCCGGTCCTaGACGACCACGTATGCCTGT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKRSCRS*TTTYAC
Trigger: ACAGGCATACGTGGTCGTCCAGGACCGGCAGGACCT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCACCCATTGGACCAGTaGGGCCAGCTTCACCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKHPLDQ*GQLHPW
Trigger: CCAAGGGTGAAGCTGGCCCCACTGGTCCAATGGGTG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGACCCAGAGGACCCATaGCACCCATTGGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKDPEDP*HPLDQW
Trigger: CCACTGGTCCAATGGGTGCCATGGGTCCTCTGGGTC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCATTCCAGGATTTCCTaGAAAACCAGAAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSHSRIS*KTRRAW
Trigger: CCAGGCTCTTCTGGTTTTCCAGGAAATCCTGGAATG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGACCTGGAGAGCCAACTaGACCTGGGGGCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKTWRAN*TWGPSF
Trigger: GAAACTGGGCCCCCAGGTCCAGTTGGCTCTCCAGGT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAATACCATGTGGCCCTaGTTCCCCTTTTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTNTMWP*FPFWAS
Trigger: GCTGGCCCAAAAGGGGAACCAGGGCCACATGGTATT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAGGGCCCAAAGGACCTaGAAGACCTCTTGCACCATC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTRAQRT*KTSCTI
Trigger: GATGGTGCAAGAGGTCTTCCAGGTCCTTTGGGCCCT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCCTGTTGCACCAGTTaGTCCTACTTTTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISCCTS*SYFSWC
Trigger: ACACCAGGAAAAGTAGGACCAACTGGTGCAACAGGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGCCAGCTGGACCTTCTaGTCCAGGTTCCCCTACAGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKASWTF*SRFPYR
Trigger: CCTGTAGGGGAACCTGGACCAGAAGGTCCAGCTGGC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCACCACGAGGTCCTTaGGGTCCAGGTAATCCACGT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSPRGP*GPGNPR
Trigger: ACGTGGATTACCTGGACCCCAAGGACCTCGTGGTGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTACTGCCTCGTACACCTaGAGGTCCAATTGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTTASYT*RSNWPK
Trigger: CTTGGGCCAATTGGACCTCCAGGTGTACGAGGCAGT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTATCACACGTGCGGGCTaGGTGCTTTTTCGAGCCATC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTITRAG*VLFRAI
Trigger: GATGGCTCGAAAAAGCACCCAGCCCGCACGTGTGAT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGCATGGCTTGTCTTTTaGGATGGTCCCAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSAWLVF*DGPSCL
Trigger: TAAACAGCTGGGACCATCCCAAAAGACAAGCCATGC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR CAA 72 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATaGATGGTGGTGCTCATTGTCGATGTGTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWS*MVVLIVDVSWL
Trigger: AAGCCAAGACACATCGACAATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTACATCTGGCCATTCTaGGTGCAGGCTATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSYIWPF*VQAISS
Trigger: TGAAGAAATAGCCTGCACTCAGAATGGCCAGATGTA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGGCATTAGTCCTACTTaGCTCCCAAGTCCAGATTTT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSGISPT*LPSPDF
Trigger: AAAATCTGGACTTGGGAGTCAAGTAGGACTAATGCC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGCCAGCTTCTCCTTTaGAACCTGGAACTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGQLLL*NLELLD
Trigger: ATCCAGGAGTTCCAGGTTTCAAAGGAGAAGCTGGCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCTCCCGGCATACCTTaGAGACCTGGTGGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSPGIP*RPGGPV
Trigger: TACAGGCCCACCAGGTCTTCAAGGTATGCCGGGAGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGTTTCCTTCTTTACCTaGAGGACCAACTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTVSFFT*RTNWAW
Trigger: CCAGGCCCAGTTGGTCCTTCAGGTAAAGAAGGAAAC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCAGTCAAAGTTCTTGTaGATGGCGGTGGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSQSKFL*MAVVID
Trigger: ATCAATGACCACCGCCATTCACAAGAACTTTGACTG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTTGACAATCTTGGAATaGGAGGTCACAAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSLTILE*EVTKGH
Trigger: GTGCCCTTTTGTGACCTCTCATTCCAAGATTGTCAA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTATGACAGAGGAACAGTaGACAAGCATTGGAACGATG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIMTEEQ*TSIGTM
Trigger: CATCGTTCCAATGCTTGTTCACTGTTCCTCTGTCAT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCTGGCCATTCTGAGTaGAGGCTATTTCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISGHSE*RLFLHH
Trigger: ATGGTGAAGAAATAGCCTGCACTCAGAATGGCCAGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCGCCCCTGTAGGACCTaGTTCTCCCTTCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKRPCRT*FSLHSR
Trigger: CCTGGAATGAAGGGAGAAGCAGGTCCTACAGGGGCG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCCAGGAGCTCCCCTCTaGCCAGGAACTCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKPGAPL*PGTPAF
Trigger: AAATGCTGGAGTTCCTGGGCAGAGGGGAGCTCCTGG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTATCTCCTCTTTGTCCTaGATCTCCTGGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTISSLS*ISWSTH
Trigger: GTGGGTGCTCCAGGAGATGCAGGACAAAGAGGAGAT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTTAGGTCATCACACGTaGGGGCTGGGTGCTTTTTCG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTLGHHT*GLGAFS
Trigger: CGAAAAAGCACCCAGCCCGCACGTGTGATGACCTAA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCTTGTCACAGAGAATaGCTCCATTGTCACAGACAC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISCHRE*LHCHRH
Trigger: GTGTCTGTGACAATGGAGCCATTCTCTGTGACAAGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTGCACCAGGAAGACCTaGAGAGCCAACTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKCTRKT*RANWTW
Trigger: CCAGGTCCAGTTGGCTCTCCAGGTCTTCCTGGTGCA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGCCTTCTTCACCGGGTaGGCCTATCGGACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKAFFTG*AYRTLN
Trigger: ATTCAGGGTCCGATAGGCCCACCCGGTGAAGAAGGC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGATTCCTATGGAGCCTaGAGGACCTGGACGGCCATC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKDSYGA*RTWTAI
Trigger: GATGGCCGTCCAGGTCCTCCAGGCTCCATAGGAATC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCCAGGGGTCCCAGATaGACCTGGACTGCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSRGPR*TWTAFW
Trigger: CCAAAAGGCAGTCCAGGTCCATCTGGGACCCCTGGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCATACCTTGAAGACCTaGTGGGCCTGTATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTHTLKT*WACISR
Trigger: CCTGGAGATACAGGCCCACCAGGTCTTCAAGGTATG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTGTCCGTCAGGACCCTaGGGTCCGGCAAAACCAACA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKCPSGP*GPAKPT
Trigger: TGTTGGTTTTGCCGGACCCCAGGGTCCTGACGGACA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGCACCAGGCGGACCTTaGGTTCCTCGACCACCTTTT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKAPGGP*VPRPPF
Trigger: AAAAGGTGGTCGAGGAACCCAAGGTCCGCCTGGTGC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGCCTGGAGGACCTCTTaGGCCAAATGGTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKAWRTS*AKWSRD
Trigger: ATCCCTGGACCATTTGGCCCAAGAGGTCCTCCAGGC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAGGACCAACTGGGCCTaGAGGACCTCTTGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKRTNWA*RTSWAK
Trigger: TTTGGCCCAAGAGGTCCTCCAGGCCCAGTTGGTCCT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCTCTGCTTTGCGGAATaGCAAAGCTTTAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSLCFAE*QSFRSS
Trigger: TGATGACCTAAAGCTTTGCCATTCCGCAAAGCAGAG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCAAAGTTCTTGTGAATaGCGGTGGTCATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSQSSCE*RWSLMV
Trigger: CACCATCAATGACCACCGCCATTCACAAGAACTTTG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCCTTTGTGTCCTCGGTaGCCCTTCAGACCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKPLCPR*PFRPGR
Trigger: TCTTCCAGGTCTGAAGGGTCACCGAGGACACAAAGG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCATCAGGAGCCGCCTaGTCTTCAGTAAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSSGAA*SSVNSG
Trigger: TCCTGAGTTTACTGAAGATCAGGCGGCTCCTGATGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGACTTCAGGGTAGCATaGACCCCTGGGTCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKDFRVA*TPGSVL
Trigger: CAAAACGGACCCAGGGGTTCATGCTACCCTGAAGTC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTACTGGATGGGTTTGCTaGAATACATGTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLITGWVC*NTCFSC
Trigger: ACAGGAGAAACATGTATTTCAGCAAACCCATCCAGT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTTGAGGTTCTTAGCTTaGTCGTCCATGTATCCTACA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILRFLA*SSMYPT
Trigger: TGTAGGATACATGGACGATCAAGCTAAGAACCTCAA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTTGAGGTTCTTAGCTTaGTCGTCCATGTATCCTACA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSLRFLA*SSMYPT
Trigger: TGTAGGATACATGGACGATCAAGCTAAGAACCTCAA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCATATATACAATGCTaGTGCAGGATCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPYIQC*CRISHY
Trigger: GTAATGGCTGATCCTGCATCAGCATTGTATATATGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCTTTGCAGAGATACATaGCCAAAGTTGTATGCATGG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILCRDT*PKLYAW
Trigger: CCATGCATACAACTTTGGTCATGTATCTCTGCAAAG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCTTTGCAGAGATACATaGCCAAAGTTGTATGCATGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSLCRDT*PKLYAW
Trigger: CCATGCATACAACTTTGGTCATGTATCTCTGCAAAG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTACCAAAATTGGTATTaGCACCTCCAGGTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSYQNWY*HLQVFV
Trigger: CACAAACACCTGGAGGTGGCAATACCAATTTTGGTA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAGGTCCTGTAGGTCCTaGACCACCTTGCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKRSCRS*TTLLSL
Trigger: CAAGGACAGCAAGGTGGTGCAGGACCTACAGGACCT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAGCTCCCGGAGATCCTaGAAATCCCACTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSSRRS*KSHFTR
Trigger: CCTGGTGAAGTGGGATTTGCAGGATCTCCGGGAGCT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTGGAGGTCCAACTCTaGCCGCAGAACCAGGAAATC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLEVQL*PQNQEI
Trigger: GATTTCCTGGTTCTGCGGGCAGAGTTGGACCTCCAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCCAACAATTCCTCTCTaGCCGGTCGTTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKPTIPL*PVVPAG
Trigger: TCCAGCTGGAACGACCGGGCAGAGAGGAATTGTTGG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTGCTTCTCCTACACTaGCTCGTACACCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLLLLH*LVHLEV
Trigger: GACCTCCAGGTGTACGAGGCAGTGTAGGAGAAGCAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTATTCAAAGACAGTCTTaGCCACATTTCCATTCCGCT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIIQRQS*PHFHSA
Trigger: AGCGGAATGGAAATGTGGGCAAGACTGTCTTTGAAT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTATGATGGGCAAGCGTaGCACATTCTGTGTTCTATA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSYDGQA*HILCSI
Trigger: TATAGAACACAGAATGTGGCACGCTTGCCCATCATA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCAAGCATTGGAACGATaGTCTTTCTTTCAGAAACGG +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSQALER*SFFQKR
Trigger: CCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGGCCAGCTTCACCCTTaGAACCAGGTGCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKGQLHP*NQVLQL
Trigger: AAGTTGGAGCACCTGGTTCCAAGGGTGAAGCTGGCC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTACCAACAGCTCCAGTTaGCCCATTTTCACCTCGAGA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTTNSSS*PIFTSR
Trigger: TCTCGAGGTGAAAATGGGCCAACTGGAGCTGTTGGT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCACCACGAGGTCCTTaGGGTCCAGGTAATCCACGT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSPRGP*GPGNPR
Trigger: ACGTGGATTACCTGGACCCCAAGGACCTCGTGGTGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCCAATTGGCCCAAGTaGCCCAGGGTTTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSNWPK*PRVSFF
Trigger: AAAGAAGGAAACCCTGGGCCACTTGGGCCAATTGGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCAACGCCGAATTCCTaGTCTGTGCCGCCAACATCC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSTPNS*SVPPTS
Trigger: GGATGTTGGCGGCACAGACCAGGAATTCGGCGTTGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCCAAAGTTGTATGCATaGCTTGTCTTTTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIPKLYA*LVFWDG
Trigger: ACCATCCCAAAAGACAAGCCATGCATACAACTTTGG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCAAAGTTGTATGCATaGCTTGTCTTTTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPKLYA*LVFWDG
Trigger: ACCATCCCAAAAGACAAGCCATGCATACAACTTTGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGTGAAAAGTAGATTCTaGGGTTATTGTAGCACCATG +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIVKSRF*GYCSTM
Trigger: CATGGTGCTACAATAACCTCAGAATCTACTTTTCAC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGTTTCCTTCTTTACCTaGAGGACCAACTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKVSFFT*RTNWAW
Trigger: CCAGGCCCAGTTGGTCCTTCAGGTAAAGAAGGAAAC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTTTTACAGATGTAAGTaGTGTTCTGGGAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSFYRCK*CSGRLL
Trigger: AAGAAGCCTCCCAGAACATCACTTACATCTGTAAAA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTTAGAGCAAGTGTCTTaGAGAACGATATACCGGAAT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILEQVS*RTIYRN
Trigger: ATTCCGGTATATCGTTCTTCAAGACACTTGCTCTAA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCAGGAGCAAGATCTATaGTGGGCAAGCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKQEQDL*WASVPH
Trigger: ATGTGGCACGCTTGCCCATCATAGATCTTGCTCCTG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTCCAATCATCACATTTaGTTAGAGTCAGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLISNHHI*LESAPQ
Trigger: TTGTGGAGCTGACTCTAATCAAATGTGATGATTGGA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTATTCCAGATACAGTATaGCAGAGGAACAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSIPDTV*QRNSEQ
Trigger: TTGTTCACTGTTCCTCTGTCATACTGTATCTGGAAT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTGGAAAACCACGATTaGCAGGAGCACCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLENHD*QEHPFL
Trigger: GAGAAAGGGGTGCTCCTGGCAATCGTGGTTTTCCAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCCTCTCTCTCCACGTTaGCCAGGCATGCCAACAATT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKPLSPR*PGMPTI
Trigger: AATTGTTGGCATGCCTGGGCAACGTGGAGAGAGAGG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCAGTATTCACCACTCTaGTTTGCGGAATGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTQYSPL*FAEWQS
Trigger: GCTTTGCCATTCCGCAAAGCAGAGTGGTGAATACTG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAAAACCTGTGGGGCCTaGAGGTCCTTGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKKTCGA*RSLFSS
Trigger: AGAGGAGAACAAGGACCTCCAGGCCCCACAGGTTTT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCCTGTTGCACCAGTTaGTCCTACTTTTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSCCTS*SYFSWC
Trigger: ACACCAGGAAAAGTAGGACCAACTGGTGCAACAGGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCCTTGTTCACCATTTaGACCAGGAGGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSLFTI*TRRARK
Trigger: CTTCCTGGCCCTCCTGGTCCAAATGGTGAACAAGGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTACTTTCTGCAAAGGTaGTCATTGTCATTGGTCATC +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIYFLQR*SLSLVI
Trigger: GATGACCAATGACAATGACCACCTTTGCAGAAAGTA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTACAGTGAACAAGCATTaGAACGATGCTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSTVNKH*NDALSF
Trigger: GAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAGGACCAACTGTTCCTaGGTCACCCATTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKRTNCS*VTHWTS
Trigger: ACTGGTCCAATGGGTGACCCAGGAACAGTTGGTCCT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCACAGACACAGATCTaGCAAGGGGCAGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSQTQI*QGAGFQ
Trigger: TTGGAAACCTGCCCCTTGTCAGATCTGTGTCTGTGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGCATTAGTCCTACTTaGCTCCCAAGTCCAGATTTT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGISPT*LPSPDF
Trigger: AAAATCTGGACTTGGGAGTCAAGTAGGACTAATGCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCTCCAGGAACACCTTaGTCACCTGGTTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSPGTP*SPGFPP
Trigger: AGGTGGAAAACCAGGTGATCAAGGTGTTCCTGGAGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAATCTGACTACTGAGTaGCTTCAGGGTAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTNLTTE*LQGSMN
Trigger: GTTCATGCTACCCTGAAGTCACTCAGTAGTCAGATT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTATGACAGAGGAACAGTaGACAAGCATTGGAACGATG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTMTEEQ*TSIGTM
Trigger: CATCGTTCCAATGCTTGTTCACTGTTCCTCTGTCAT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTAGCGTGCATTTAATTTaGTGCTTTGCAGAGATACAT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSVHLI*CFAEIH
Trigger: ATGTATCTCTGCAAAGCATCAAATTAAATGCACGCT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTGGACGACCACGTATaGCTGTTACAACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLDDHV*LLQQAL
Trigger: TAGTGCCTGTTGTAACAGGCATACGTGGTCGTCCAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCTTGTCACAGAGAATaGCTCCATTGTCACAGACAC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSCHRE*LHCHRH
Trigger: GTGTCTGTGACAATGGAGCCATTCTCTGTGACAAGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTTCCTGGGTCACCTCTaGGACCTCTTTTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKFLGHL*DLFCLL
Trigger: AAGAAGGCAAAAGAGGTCCCAGAGGTGACCCAGGAA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCCAATTGGCCCAAGTaGCCCAGGGTTTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSNWPK*PRVSFF
Trigger: AAAGAAGGAAACCCTGGGCCACTTGGGCCAATTGGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCTTCAACAGATCCTTaGTTAGGATCAATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSSTDP*LGSIQY
Trigger: ATACTGGATTGATCCTAACCAAGGATCTGTTGAAGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCCACCAGGTTTTACGTaGTACACTGGATGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKPPGFT*YTGWVC
Trigger: GCAAACCCATCCAGTGTACCACGTAAAACCTGGTGG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCTTGTGAATGGCGGTaGTCATTGATGGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSCEWR*SLMVVL
Trigger: GAGCACCACCATCAATGACCACCGCCATTCACAAGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTAATAAACATGTGTTGTaGCTCTATATACCCCACTCT +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLINKHVL*LYIPHS
Trigger: AGAGTGGGGTATATAGAGCCACAACACATGTTTATT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGCCTATCTCCAGTCTTaGAATAATAACAGAAGCATA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIAYLQS*NNNRSI
Trigger: TATGCTTCTGTTATTATTCCAAGACTGGAGATAGGC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGGACCTACATGTTCTaGTCTAAGAAGCATGCAAGT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGTYMF*SKKHAS
Trigger: ACTTGCATGCTTCTTAGACCAGAACATGTAGGTCCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGTTATTGTAGCACCATaGAGTCAGCTGTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKVIVAP*SQLWAL
Trigger: AAGAGCCCACAGCTGACTTCATGGTGCTACAATAAC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCGCATGGTTTCAATCTaGCTACTGAGTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKRMVSI*LLSDFR
Trigger: CCTGAAGTCACTCAGTAGTCAGATTGAAACCATGCG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTACCAAAATTGGTATTaGCACCTCCAGGTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTYQNWY*HLQVFV
Trigger: CACAAACACCTGGAGGTGGCAATACCAATTTTGGTA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGAAGTGGATCTGGCATaGTTTCATCATAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKEVDLA*FHHSAP
Trigger: TGGGGCACTATGATGAAAGCATGCCAGATCCACTTC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTATTCAAAGACAGTCTTaGCCACATTTCCATTCCGCT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTIQRQS*PHFHSA
Trigger: AGCGGAATGGAAATGTGGGCAAGACTGTCTTTGAAT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCAAGCATTGGAACGATaGTCTTTCTTTCAGAAACGG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTQALER*SFFQKR
Trigger: CCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCAGTCCAGCACATCCTaGCATTCTATCTTGTCACAG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKQSSTS*HSILSQ
Trigger: CTGTGACAAGATAGAATGCCAGGATGTGCTGGACTG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTGTCAGGAGATTTACTaGCCCACCAGGTTTTACGTG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKCQEIY*PTRFYV
Trigger: CACGTAAAACCTGGTGGGCCAGTAAATCTCCTGACA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTATTGTCGATGTGTCTTaGCTTACTTTACACAAAACA +
Preference number: 4 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIIVDVS*LTLHKT
Trigger: TGTTTTGTGTAAAGTAAGCCAAGACACATCGACAAT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAGAGGCAGTGATAATTaGTGTCATGTTGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTRGSDN*CHVAFV
Trigger: CACAAAGGCAACATGACACCAATTATCACTGCCTCT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGTGAAAAGTAGATTCTaGGGTTATTGTAGCACCATG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTVKSRF*GYCSTM
Trigger: CATGGTGCTACAATAACCTCAGAATCTACTTTTCAC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAATCTGACTACTGAGTaGCTTCAGGGTAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKNLTTE*LQGSMN
Trigger: GTTCATGCTACCCTGAAGTCACTCAGTAGTCAGATT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGGTCATTTTTCCTATaGAAGTTCAAAGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGSFFL*KFKGQM
Trigger: CATTTGGCCTTTGAACTTTCATAGGAAAAATGACCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTATTCCAGATACAGTATaGCAGAGGAACAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTIPDTV*QRNSEQ
Trigger: TTGTTCACTGTTCCTCTGTCATACTGTATCTGGAAT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCTGGCCATTCTGAGTaGAGGCTATTTCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSGHSE*RLFLHH
Trigger: ATGGTGAAGAAATAGCCTGCACTCAGAATGGCCAGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTCTGCTTTGCGGAATaGCAAAGCTTTAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLCFAE*QSFRSS
Trigger: TGATGACCTAAAGCTTTGCCATTCCGCAAAGCAGAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTTTTACGTGGTACACTaGATGGGTTTGCTGAAATAC +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTFYVVH*MGLLKY
Trigger: GTATTTCAGCAAACCCATCCAGTGTACCACGTAAAA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTTACACAAAACAAACTaGCCCAATTTCAACGCCGAA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTLHKTN*PNFNAE
Trigger: TTCGGCGTTGAAATTGGGCCAGTTTGTTTTGTGTAA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
3UTR CAA 72 bp TTTGCAGAGATACATGACCAAAGTTGTATGCATGGCTaGTCTTTTGGGATGGTCCCAGCTGTTTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: FAEIHDQSCMHG*SFGMVPAVYFK
Trigger: TTTAAAATAAACAGCTGGGACCATCCCAAAAGACAAGCCATGCATACAACTTTGGTCATGTATCTCTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCCATATATACAATGCTaGTGCAGGATCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKPYIQC*CRISHY
Trigger: GTAATGGCTGATCCTGCATCAGCATTGTATATATGG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTATGATGGGCAAGCGTaGCACATTCTGTGTTCTATA +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKYDGQA*HILCSI
Trigger: TATAGAACACAGAATGTGGCACGCTTGCCCATCATA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCTTCAACAGATCCTTaGTTAGGATCAATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSSTDP*LGSIQY
Trigger: ATACTGGATTGATCCTAACCAAGGATCTGTTGAAGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAATAAACATGTGTTGTaGCTCTATATACCCCACTCT +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTNKHVL*LYIPHS
Trigger: AGAGTGGGGTATATAGAGCCACAACACATGTTTATT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGCCTATCTCCAGTCTTaGAATAATAACAGAAGCATA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTAYLQS*NNNRSI
Trigger: TATGCTTCTGTTATTATTCCAAGACTGGAGATAGGC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTTTTACAGATGTAAGTaGTGTTCTGGGAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKFYRCK*CSGRLL
Trigger: AAGAAGCCTCCCAGAACATCACTTACATCTGTAAAA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTTAGAGCAAGTGTCTTaGAGAACGATATACCGGAAT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLEQVS*RTIYRN
Trigger: ATTCCGGTATATCGTTCTTCAAGACACTTGCTCTAA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCCTCGTCTTCTTCCTaGGCTTTTATTGAGACAAAT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSSSSS*AFIETN
Trigger: ATTTGTCTCAATAAAAGCCCAGGAAGAAGACGAGGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTATTGTCGATGTGTCTTaGCTTACTTTACACAAAACA +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTIVDVS*LTLHKT
Trigger: TGTTTTGTGTAAAGTAAGCCAAGACACATCGACAAT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTATGAGATTGTACATGTaGAAGAGTCTCAATTTAGAG +
Preference number: 4 (lower is better)
Translates to: YTPLFKLPARKKNFLINTMRLYM*KSLNLE
Trigger: CTCTAAATTGAGACTCTTCCACATGTACAATCTCAT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAGCGTGCATTTAATTTaGTGCTTTGCAGAGATACAT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSVHLI*CFAEIH
Trigger: ATGTATCTCTGCAAAGCATCAAATTAAATGCACGCT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCAAAAACCACTGACATaGCAAAAGCGTGCATTTAAT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKQKPLT*QKRAFN
Trigger: ATTAAATGCACGCTTTTGTCATGTCAGTGGTTTTTG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR TCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCAGTTTATTCAGTCATaGAAAATCTATTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKQFIQS*KIYCLP
Trigger: GGGCAAGCAATAGATTTTTCATGACTGAATAAACTG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR GCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGAATCAGTTTACTTTCTaGAAAGGTGGTCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKNQFTF*KGGHCH
Trigger: ATGACAATGACCACCTTTGCAGAAAGTAAACTGATT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CCA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGATGAGATTGTACATGTaGAAGAGTCTCAATTTAGAG +
Preference number: 4 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKMRLYM*KSLNLE
Trigger: CTCTAAATTGAGACTCTTCCACATGTACAATCTCAT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 90 bp TGGAGCACCCACAGGGCCAGGAGTTCCAGGGGCACCCTGAGAGCCTaGCAGACCTGCAGGCCCAGGGTCTCCACGATCACCACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: WSTHRARSSRGTLRA*QTCRPRVSTITTFS
Trigger: GGAGAACGTGGTGATCGTGGAGACCCTGGGCCTGCAGGTCTGCCAGGCTCTCAGGGTGCCCCTGGAACTCCTGGCCCTGTGGGTGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 90 bp TGGAAGGCCCATGCTCCCGGGCTGCCCTCTGATTCCTATGGAGCCTaGAGGACCTGGACGGCCATCTTCCCCTGGCGCACCCAAAGGTCC +
Preference number: 5 (lower is better)
Translates to: WKAHAPGLPSDSYGA*RTWTAIFPWRTQRS
Trigger: GGACCTTTGGGTGCGCCAGGGGAAGATGGCCGTCCAGGTCCTCCAGGCTCCATAGGAATCAGAGGGCAGCCCGGGAGCATGGGCCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS GCA 90 bp GTTCCCGCTGGGCCTGGTAGGCCGGGCATGCCTCTCTCTCCACGTTaGCCAGGCATGCCAACAATTCCTCTCTGCCCGGTCGTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: VPAGPGRPGMPLSPR*PGMPTIPLCPVVPA
Trigger: AGCTGGAACGACCGGGCAGAGAGGAATTGTTGGCATGCCTGGGCAACGTGGAGAGAGAGGCATGCCCGGCCTACCAGGCCCAGCGGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 90 bp AGGAGCACCCCTTTCTCCCACTGGCCCTGGAGGACCAACTGTTCCTaGGTCACCTCTGGGACCTCTTTTGCCTTCTTCACCGGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: RSTPFSHWPWRTNCS*VTSGTSFAFFTGWA
Trigger: GGCCCACCCGGTGAAGAAGGCAAAAGAGGTCCCAGAGGTGACCCAGGAACAGTTGGTCCTCCAGGGCCAGTGGGAGAAAGGGGTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS CCA 90 bp CGGATGTCCAGGAGGTCCTGGAGCACCAGGTTGACCAGGAACACCTaGTTCTCCATCAATTCCCTGAGGTCCACGAGGGCCAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: RMSRRSWSTRLTRNT*FSINSLRSTRARSS
Trigger: GGAAGACCTGGCCCTCGTGGACCTCAGGGAATTGATGGAGAACCAGGTGTTCCTGGTCAACCTGGTGCTCCAGGACCTCCTGGACATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS CCA 90 bp GCTCAAGCCATCGGGTCCTGGGTGGGACGGATGTCCAGGAGGTCCTaGAGCACCAGGTTGACCAGGAACACCTGGTTCTCCATCAATTCC +
Preference number: 5 (lower is better)
Translates to: AQAIGSWVGRMSRRS*STRLTRNTWFSINS
Trigger: GGAATTGATGGAGAACCAGGTGTTCCTGGTCAACCTGGTGCTCCAGGACCTCCTGGACATCCGTCCCACCCAGGACCCGATGGCTTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS CCA 90 bp AGGGTCTCCACGATCACCACGTTCTCCAACAGCACCATCCCGTCCTaGGGTACCATCATTGCCAGCTGGACCTTCTGGTCCAGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: RVSTITTFSNSTIPS*GTIIASWTFWSRFP
Trigger: GGGGAACCTGGACCAGAAGGTCCAGCTGGCAATGATGGTACCCCAGGACGGGATGGTGCTGTTGGAGAACGTGGTGATCGTGGAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 90 bp AGGAGGGCCCTCAGGTCCTGCTTCTCCTACACTGCCTCGTACACCTaGAGGTCCAATTGGCCCAAGTGGCCCAGGGTTTCCTTCTTTACC +
Preference number: 5 (lower is better)
Translates to: RRALRSCFSYTASYT*RSNWPKWPRVSFFT
Trigger: GGTAAAGAAGGAAACCCTGGGCCACTTGGGCCAATTGGACCTCCAGGTGTACGAGGCAGTGTAGGAGAAGCAGGACCTGAGGGCCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 90 bp TGTTCCTGGGTCACCTCTGGGACCTCTTTTGCCTTCTTCACCGGGTaGGCCTATCGGACCCTGAATACCATGTGGCCCTGGTTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: CSWVTSGTSFAFFTG*AYRTLNTMWPWFPF
Trigger: AAAGGGGAACCAGGGCCACATGGTATTCAGGGTCCGATAGGCCCACCCGGTGAAGAAGGCAAAAGAGGTCCCAGAGGTGACCCAGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS CCA 90 bp TCGAGGACCAGGTTCACCCTTTTCTCCAGTAGGACCTGCCGGACCTaGAGGGCCCAAAGGACCTGGAAGACCTCTTGCACCATCATTTCC +
Preference number: 5 (lower is better)
Translates to: SRTRFTLFSSRTCRT*RAQRTWKTSCTIIS
Trigger: GGAAATGATGGTGCAAGAGGTCTTCCAGGTCCTTTGGGCCCTCCAGGTCCGGCAGGTCCTACTGGAGAAAAGGGTGAACCTGGTCCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 90 bp CATTCCCCAGGGGGCGTTACAGGGTCGGCACAGTCCAGCACATCCTaGCATTCTATCTTGTCACAGAGAATGGCTCCATTGTCACAGACA +
Preference number: 5 (lower is better)
Translates to: HSPGGVTGSAQSSTS*HSILSQRMAPLSQT
Trigger: TGTCTGTGACAATGGAGCCATTCTCTGTGACAAGATAGAATGCCAGGATGTGCTGGACTGTGCCGACCCTGTAACGCCCCCTGGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGCCCTCGCTCTCCTCTaGGTCCCTGTGATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIALALL*VPVILE
Trigger: CTCCAGGATCACAGGGACCAAGAGGAGAGCGAGGGC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTACCTGGAGAGCCCGTaGGGCCTTTGGCACCAGGAG +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIYLESP*GLWHQE
Trigger: CTCCTGGTGCCAAAGGCCCAACGGGCTCTCCAGGTA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTAGGACCCCGTTCTCCTaGAGCACCCTTTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIRTPFS*STLWPR
Trigger: CCTGGGCCAAAGGGTGCTCAAGGAGAACGGGGTCCT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCACCTCTGTCACCCTaGGGGCCAGGAGTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPPLSP*GPGVPA
Trigger: TGCAGGAACTCCTGGCCCCAAGGGTGACAGAGGTGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 90 bp GTCATCAGGAGCCGCCTGATCTTCAGTAAACTCAGGAAGTGGATCTaGCATGCTTTCATCATAGTGCCCCATGATATCCCCAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VIRSRLIFSKLRKWI*HAFIIVPHDIPKSS
Trigger: GCTGCTCTTGGGGATATCATGGGGCACTATGATGAAAGCATGCCAGATCCACTTCCTGAGTTTACTGAAGATCAGGCGGCTCCTGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGGGCCAGCTTCACCCTaGGAACCAGGTGCTCCAACT +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSGPASP*EPGAPT
Trigger: AGTTGGAGCACCTGGTTCCAAGGGTGAAGCTGGCCC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTGAGCCCGTTGGGCCTTaGGCACCAGGAGTACCATCA +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSEPVGP*APGVPS
Trigger: TGATGGTACTCCTGGTGCCAAAGGCCCAACGGGCTC...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCCTCTGGGACCTCTTTaGCCTTCTTCACCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIPLGPL*PSSPGG
Trigger: CCCACCCGGTGAAGAAGGCAAAAGAGGTCCCAGAGG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCCTCGAGAACCAGGATaGCCCCGGGAGCCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTPREPG*PREPGG
Trigger: CCCTCCTGGCTCCCGGGGCAATCCTGGTTCTCGAGG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTAGCACCAGGCGGACCTaGGGTTCCTCGACCACCTTT +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSTRRT*GSSTTF
Trigger: AAAGGTGGTCGAGGAACCCAAGGTCCGCCTGGTGCT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGCCATCTGGACCAGGTaGCCCATCTTCTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIAIWTR*PIFSWV
Trigger: GACCCAGGAGAAGATGGGCAACCTGGTCCAGATGGC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGACCTGGACTGCCTTTaGGGCCATCAGGACCATGTC +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIDLDCL*GHQDHV
Trigger: GACATGGTCCTGATGGCCCAAAAGGCAGTCCAGGTC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTTCTCCCGGCATACCTaGAAGACCTGGTGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSFSRHT*KTWWAC
Trigger: ACAGGCCCACCAGGTCTTCAAGGTATGCCGGGAGAA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCCTGGGGTACCATCATaGCCAGCTGGACCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSPGVPS*PAGPSG
Trigger: ACCAGAAGGTCCAGCTGGCAATGATGGTACCCCAGG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCCTGGGGTACCATCATaGCCAGCTGGACCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIPGVPS*PAGPSG
Trigger: ACCAGAAGGTCCAGCTGGCAATGATGGTACCCCAGG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS TCA 90 bp GGGGCAGGTTTCCAAATGTCCCTGTTTAAGTACATCTGGCCATTCTaGGTGCAGGCTATTTCTTCACCATATCCTTCACCAGTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: GAGFQMSLFKYIWPF*VQAISSPYPSPVAR
Trigger: TCGAGCCACTGGTGAAGGATATGGTGAAGAAATAGCCTGCACTCAGAATGGCCAGATGTACTTAAACAGGGACATTTGGAAACCTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649966.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGCCCTCGCTCTCCTCTaGGTCCCTGTGATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTALALL*VPVILE
Trigger: CTCCAGGATCACAGGGACCAAGAGGAGAGCGAGGGC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTCCCAAGAGGACCCATaGGTCCAGGTTTTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSSQEDP*VQVFQA
Trigger: TGCCTGGAAAACCTGGACCAATGGGTCCTCTTGGGA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCTCCTTGAGCACCCTTaGGCCCAGGTAAACCATCAG +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILLEHP*AQVNHQ
Trigger: CTGATGGTTTACCTGGGCCAAAGGGTGCTCAAGGAG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAGGACCCCGTTCTCCTaGAGCACCCTTTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTRTPFS*STLWPR
Trigger: CCTGGGCCAAAGGGTGCTCAAGGAGAACGGGGTCCT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCCTCGAGAACCAGGATaGCCCCGGGAGCCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKPREPG*PREPGG
Trigger: CCCTCCTGGCTCCCGGGGCAATCCTGGTTCTCGAGG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGCCTGGAGGACCTCTaGGGCCAAATGGTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGLEDL*GQMVQG
Trigger: TCCCTGGACCATTTGGCCCAAGAGGTCCTCCAGGCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGCCAGGTCTTCCTTTaGGCCCTCGCTCTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGQVFL*ALALLL
Trigger: CAAGAGGAGAGCGAGGGCCAAAAGGAAGACCTGGCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGGGCCAGCTTCACCCTaGGAACCAGGTGCTCCAACT +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTGPASP*EPGAPT
Trigger: AGTTGGAGCACCTGGTTCCAAGGGTGAAGCTGGCCC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTACCATGTGCACCTCGTaGTCCAGGAGCACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTTMCTS*SRSTLW
Trigger: CCACAGGGTGCTCCTGGACAACGAGGTGCACATGGT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTGACCTGGAAGACCTCTaGCACCATCATTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIDLEDL*HHHFQL
Trigger: CAGCTGGAAATGATGGTGCAAGAGGTCTTCCAGGTC...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAGCACCAGGCGGACCTaGGGTTCCTCGACCACCTTT +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSTRRT*GSSTTF
Trigger: AAAGGTGGTCGAGGAACCCAAGGTCCGCCTGGTGCT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTTCCTGGGTCACCCATaGGACCAGTGGGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTFLGHP*DQWGQL
Trigger: AAGCTGGCCCCACTGGTCCAATGGGTGACCCAGGAA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618828.1
CDS TCA 90 bp GGGGCAGGTTTCCAAATGTCCCTGTTTAAGTACATCTGGCCATTCTaGGTGCAGGCTATTTCTTCACCATATCCTTCATCCTCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GAGFQMSLFKYIWPF*VQAISSPYPSSSSS
Trigger: AGAAGACGAGGATGAAGGATATGGTGAAGAAATAGCCTGCACTCAGAATGGCCAGATGTACTTAAACAGGGACATTTGGAAACCTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCCTGGAGCACCAGGTaGACCAGGAACACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSWSTR*TRNTWF
Trigger: GAACCAGGTGTTCCTGGTCAACCTGGTGCTCCAGGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTATCTCCAGGAACACCTaGATCACCTGGTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSISRNT*ITWFST
Trigger: GGTGGAAAACCAGGTGATCAAGGTGTTCCTGGAGAT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGACCTGGACTGCCTTTaGGGCCATCAGGACCATGTC +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTDLDCL*GHQDHV
Trigger: GACATGGTCCTGATGGCCCAAAAGGCAGTCCAGGTC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTTCTCCCGGCATACCTaGAAGACCTGGTGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTFSRHT*KTWWAC
Trigger: ACAGGCCCACCAGGTCTTCAAGGTATGCCGGGAGAA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGCCTCTCTCTCCACGTaGCCCAGGCATGCCAACAAT +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTASLST*PRHANN
Trigger: ATTGTTGGCATGCCTGGGCAACGTGGAGAGAGAGGC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTGCATGGCTTGTCTTTaGGGATGGTCCCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLICMACL*GWSQLF
Trigger: AAACAGCTGGGACCATCCCAAAAGACAAGCCATGCA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTTGCATGGCTTGTCTTTaGGGATGGTCCCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSCMACL*GWSQLF
Trigger: AAACAGCTGGGACCATCCCAAAAGACAAGCCATGCA...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCTGCCCCTTTTCAGCTaGTTCAGGCTCATAACCATC +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILPLFS*FRLITI
Trigger: GATGGTTATGAGCCTGAACAAGCTGAAAAGGGGCAG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGGCCAGGTCTTCCTTTaGGCCCTCGCTCTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKGQVFL*ALALLL
Trigger: CAAGAGGAGAGCGAGGGCCAAAAGGAAGACCTGGCC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCCTGGATCACCCGGTaGGCCTCGAATTCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSWITR*ASNSLR
Trigger: CCTCAGGGAATTCGAGGCCAACCGGGTGATCCAGGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCTCCTTGAGCACCCTTaGGCCCAGGTAAACCATCAG +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTLLEHP*AQVNHQ
Trigger: CTGATGGTTTACCTGGGCCAAAGGGTGCTCAAGGAG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTCCTGGAGCACCAGGTaGACCAGGAACACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKSWSTR*TRNTWF
Trigger: GAACCAGGTGTTCCTGGTCAACCTGGTGCTCCAGGA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTAACCAATCGGACCCATaGGTCCAGGATCACCAGGTT +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTNQSDP*VQDHQV
Trigger: AACCTGGTGATCCTGGACCAATGGGTCCGATTGGTT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTATTCACCACTCTGCTTaGCGGAATGGCAAAGCTTTA +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSIHHSA*RNGKAL
Trigger: TAAAGCTTTGCCATTCCGCAAAGCAGAGTGGTGAAT...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTTGCTTCCGCCCAGTTaGCCATCATGTCTAAATATT +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLILLPPS*PSCLNI
Trigger: AATATTTAGACATGATGGCAAACTGGGCGGAAGCAA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTACCATCAGTTCCTATaGCACCAGGAAGACCTGGAG +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTYHQFL*HQEDLE
Trigger: CTCCAGGTCTTCCTGGTGCAATAGGAACTGATGGTA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS TCA 90 bp TTTACTGGCCCACCAGGTTTTACGTGGTACACTGGATGGGTTTGCTaGAATACATGTTTCTCCTGTTTCCATGTTGCAGTAAACTTTGAT +
Preference number: 5 (lower is better)
Translates to: FTGPPGFTWYTGWVC*NTCFSCFHVAVNFD
Trigger: ATCAAAGTTTACTGCAACATGGAAACAGGAGAAACATGTATTTCAGCAAACCCATCCAGTGTACCACGTAAAACCTGGTGGGCCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS GCA 90 bp TATCCTTCATCCTCGTCTTCTTCCTGGGCTTTTATTGAGACAAATTaGCCTAATAAAACAATAAGAATGAGGAGAGGTCTTGCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: YPSSSSSSWAFIETN*PNKTIRMRRGLASA
Trigger: GGCGGAAGCAAGACCTCTCCTCATTCTTATTGTTTTATTAGGGCAATTTGTCTCAATAAAAGCCCAGGAAGAAGACGAGGATGAAGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTTCCTGGCATTCTATCTaGTCACAGAGAATGGCTCCA +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTSWHSI*SQRMAP
Trigger: TGGAGCCATTCTCTGTGACAAGATAGAATGCCAGGA...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCTTCCTCTACCAAAATaGGTATTGCCACCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTLPLPK*VLPPPG
Trigger: ACCTGGAGGTGGCAATACCAATTTTGGTAGAGGAAG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGACCTTTATCTCCTGTaGCACCAGTTGGTCCTACTT +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTDLYLL*HQLVLL
Trigger: AAGTAGGACCAACTGGTGCAACAGGAGATAAAGGTC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTATCTTCAACAGATCCTaGGTTAGGATCAATCCAGTA +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIIFNRS*VRINPV
Trigger: TACTGGATTGATCCTAACCAAGGATCTGTTGAAGAT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTCATTGTCGATGTGTCTaGGCTTACTTTACACAAAAC +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIHCRCV*AYFTQN
Trigger: GTTTTGTGTAAAGTAAGCCAAGACACATCGACAATG...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGAATGGCGGTGGTCATaGATGGTGGTGCTCATTGTC +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKEWRWS*MVVLIV
Trigger: GACAATGAGCACCACCATCAATGACCACCGCCATTC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp GGAACAGTGAACAAGCATTGGAACGATGCTCTTTCTTTCAGAAACGGGAAGTCTCAAAATAAACATGTGTaGTGGCTCTATATACCCCAC +
Preference number: 5 (lower is better)
Translates to: GTVNKHWNDALSFRNGKSQNKHV*WLYIPH
Trigger: GTGGGGTATATAGAGCCACAACACATGTTTATTTTG...AGACTTCCCGTTTCTGAAAGAAAGAGCATCGTTCCAATGCTTGTTCACTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTTTCCAATCATCACATTaGATTAGAGTCAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIFQSSH*IRVSST
Trigger: TGTGGAGCTGACTCTAATCAAATGTGATGATTGGAA...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATTGATGGTGGTGCTCATTATAATTGGTGTCATGTaGCCTTTGTGGGTAATGTTG +
Preference number: 5 (lower is better)
Translates to: SNSQSSCEWRWSLMVVLIIIGVM*PLWVML
Trigger: CAACATTACCCACAAAGGCAACATGACACCAATTAT...AATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGATCTCCAGGAACACCTaGATCACCTGGTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKISRNT*ITWFST
Trigger: GGTGGAAAACCAGGTGATCAAGGTGTTCCTGGAGAT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTATTCACCACTCTGCTTaGCGGAATGGCAAAGCTTTA +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTIHHSA*RNGKAL
Trigger: TAAAGCTTTGCCATTCCGCAAAGCAGAGTGGTGAAT...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGACCTTTATCTCCTGTaGCACCAGTTGGTCCTACTT +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKDLYLL*HQLVLL
Trigger: AAGTAGGACCAACTGGTGCAACAGGAGATAAAGGTC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTGTACACTGGATGGGTTaGCTGAAATACATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTVHWMG*LKYMFL
Trigger: GAGAAACATGTATTTCAGCAAACCCATCCAGTGTAC...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTGGGCAGGCTTTTATaGGTAGCATTCCCAAAATCC +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLGRLL*VAFPKS
Trigger: GGATTTTGGGAATGCTACCAATAAAAGCCTGCCCAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCTTCCTGGGCTTTTATaGAGACAAATTGCCCTAATA +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTLPGLL*RQIALI
Trigger: TATTAGGGCAATTTGTCTCAATAAAAGCCCAGGAAG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTACCAAAATTGGTATaGCCACCTCCAGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLPKLV*PPPGVC
Trigger: ACAAACACCTGGAGGTGGCAATACCAATTTTGGTAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTATTCAAAGACAGTCTaGCCCACATTTCCATTCCGC +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKYSKTV*PTFPFR
Trigger: GCGGAATGGAAATGTGGGCAAGACTGTCTTTGAATA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCATTGTCGATGTGTCTaGGCTTACTTTACACAAAAC +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTHCRCV*AYFTQN
Trigger: GTTTTGTGTAAAGTAAGCCAAGACACATCGACAATG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp TATACCCCACTCTTTAAGCTACCTGCCAGGAAGAAGAATTTCCTCATAAATACTCAAAATAAACATGTGTaGTGGCTCTATATACCCCAC +
Preference number: 5 (lower is better)
Translates to: YTPLFKLPARKKNFLINTQNKHV*WLYIPH
Trigger: GTGGGGTATATAGAGCCACAACACATGTTTATTTTG...AGTATTTATGAGGAAATTCTTCTTCCTGGCAGGTAGCTTAAAGAGTGGGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGTTGCTTCCGCCCAGTTaGCCATCATGTCTAAATATT +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLLPPS*PSCLNI
Trigger: AATATTTAGACATGATGGCAAACTGGGCGGAAGCAA...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGGTACACTGGATGGGTTaGCTGAAATACATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKVHWMG*LKYMFL
Trigger: GAGAAACATGTATTTCAGCAAACCCATCCAGTGTAC...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTTAGAGCAAGTGTCTaGAAGAACGATATACCGGAA +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLRASV*KNDIPE
Trigger: TTCCGGTATATCGTTCTTCAAGACACTTGCTCTAAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGCTTCCTGGGCTTTTATaGAGACAAATTGCCCTAATA +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKLPGLL*RQIALI
Trigger: TATTAGGGCAATTTGTCTCAATAAAAGCCCAGGAAG...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS-3UTR CAA 90 bp CCACCACATCTCCTTTTCACTATTGGAAATGAAATAGATCTAATATGGTCAAAGATCTTCAACAGATCCTaGGTTAGGATCAATCCAGTA +
Preference number: 5 (lower is better)
Translates to: PPHLLFTIGNEIDLIWSKIFNRS*VRINPV
Trigger: TACTGGATTGATCCTAACCAAGGATCTGTTGAAGAT...CTTTGACCATATTAGATCTATTTCATTTCCAATAGTGAAAAGGAGATGTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 72 bp CATGCTCCCGGGCTGCCCTCTGATTCCTATGGAGCCTaGAGGACCTGGACGGCCATCTTCCCCTGGCGCACC +
Preference number: 6 (lower is better)
Translates to: HAPGLPSDSYGA*RTWTAIFPWRT
Trigger: GGTGCGCCAGGGGAAGATGGCCGTCCAGGTCCTCCAGGCTCCATAGGAATCAGAGGGCAGCCCGGGAGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CAA 90 bp GAGGTCCACGAGGGCCAGGTCTTCCTTTTGGCCCTCGCTCTCCTCTaGGTCCCTGTGATCCTGGAGGTCCTGCCGGTCCTGGACGACCAC +
Preference number: 6 (lower is better)
Translates to: EVHEGQVFLLALALL*VPVILEVLPVLDDH
Trigger: GTGGTCGTCCAGGACCGGCAGGACCTCCAGGATCACAGGGACCAAGAGGAGAGCGAGGGCCAAAAGGAAGACCTGGCCCTCGTGGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS GCA 72 bp CTACCTTTGGGGCCTGGAAGGCCCATGCTCCCGGGCTaGCCTCTGATTCCTATGGAGCCTGGAGGACCTGGA +
Preference number: 6 (lower is better)
Translates to: LPLGPGRPMLPG*PLIPMEPGGPG
Trigger: TCCAGGTCCTCCAGGCTCCATAGGAATCAGAGGGCAGCCCGGGAGCATGGGCCTTCCAGGCCCCAAAGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 72 bp AGGTTTCCCAGGGTCACCACTGCTACCTTTGGGGCCTaGAAGGCCCATGCTCCCGGGCTGCCCTCTGATTCC +
Preference number: 6 (lower is better)
Translates to: RFPRVTTATFGA*KAHAPGLPSDS
Trigger: GGAATCAGAGGGCAGCCCGGGAGCATGGGCCTTCCAGGCCCCAAAGGTAGCAGTGGTGACCCTGGGAAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 72 bp TCGGACCCAGAGGACCCATGGCACCCATTGGACCAGTaGGGCCAGCTTCACCCTTGGAACCAGGTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: SDPEDPWHPLDQ*GQLHPWNQVLQ
Trigger: TTGGAGCACCTGGTTCCAAGGGTGAAGCTGGCCCCACTGGTCCAATGGGTGCCATGGGTCCTCTGGGTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS CAA 90 bp GGGTCCTGGGTGGGACGGATGTCCAGGAGGTCCTGGAGCACCAGGTaGACCAGGAACACCTGGTTCTCCATCAATTCCCTGAGGTCCACG +
Preference number: 6 (lower is better)
Translates to: GSWVGRMSRRSWSTR*TRNTWFSINSLRST
Trigger: CGTGGACCTCAGGGAATTGATGGAGAACCAGGTGTTCCTGGTCAACCTGGTGCTCCAGGACCTCCTGGACATCCGTCCCACCCAGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS TCA 72 bp TTCCCCAGGTTTACCAGGAGGGCCCTCTGGTCCACGTaGACCAATCGGACCCATTGGTCCAGGATCACCAGG +
Preference number: 6 (lower is better)
Translates to: FPRFTRRALWST*TNRTHWSRITR
Trigger: CCTGGTGATCCTGGACCAATGGGTCCGATTGGTTCACGTGGACCAGAGGGCCCTCCTGGTAAACCTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS GCA 72 bp GCCCAGGTAAACCATCAGAGCCTGGAAAACCACGATTaGCAGGAGCACCCCTTTCTCCCACTGGCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: AQVNHQSLENHD*QEHPFLPLALE
Trigger: CTCCAGGGCCAGTGGGAGAAAGGGGTGCTCCTGGCAATCGTGGTTTTCCAGGCTCTGATGGTTTACCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 72 bp CATACCATGTGCACCTCGTTGTCCAGGAGCACCCTGTaGCCCAAGTCTCCCTCTCTCTCCTGGCATTCCCCT +
Preference number: 6 (lower is better)
Translates to: HTMCTSLSRSTL*PKSPSLSWHSP
Trigger: AGGGGAATGCCAGGAGAGAGAGGGAGACTTGGGCCACAGGGTGCTCCTGGACAACGAGGTGCACATGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS CCA 72 bp GTCACCTCTGGGACCTCTTTTGCCTTCTTCACCGGGTaGGCCTATCGGACCCTGAATACCATGTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: VTSGTSFAFFTG*AYRTLNTMWPW
Trigger: CCAGGGCCACATGGTATTCAGGGTCCGATAGGCCCACCCGGTGAAGAAGGCAAAAGAGGTCCCAGAGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374866.9
CDS CCA 72 bp AGGTTCACCCTTTTCTCCAGTAGGACCTGCCGGACCTaGAGGGCCCAAAGGACCTGGAAGACCTCTTGCACC +
Preference number: 6 (lower is better)
Translates to: RFTLFSSRTCRT*RAQRTWKTSCT
Trigger: GGTGCAAGAGGTCTTCCAGGTCCTTTGGGCCCTCCAGGTCCGGCAGGTCCTACTGGAGAAAAGGGTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 72 bp AGGACCATTGGAGCCTGGGGGCCCCACAGGTCCAGGTaGACCTTTATCTCCTGTTGCACCAGTTGGTCCTAC +
Preference number: 6 (lower is better)
Translates to: RTIGAWGPHRSR*TFISCCTSWSY
Trigger: GTAGGACCAACTGGTGCAACAGGAGATAAAGGTCCACCTGGACCTGTGGGGCCCCCAGGCTCCAATGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 72 bp CTCAGGTCCTGCTTCTCCTACACTGCCTCGTACACCTaGAGGTCCAATTGGCCCAAGTGGCCCAGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: LRSCFSYTASYT*RSNWPKWPRVS
Trigger: GGAAACCCTGGGCCACTTGGGCCAATTGGACCTCCAGGTGTACGAGGCAGTGTAGGAGAAGCAGGACCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 72 bp ACGATCACCACGTTCTCCAACAGCACCATCCCGTCCTaGGGTACCATCATTGCCAGCTGGACCTTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: TITTFSNSTIPS*GTIIASWTFWS
Trigger: GGACCAGAAGGTCCAGCTGGCAATGATGGTACCCCAGGACGGGATGGTGCTGTTGGAGAACGTGGTGATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CCA 72 bp GGGGGCGTTACAGGGTCGGCACAGTCCAGCACATCCTaGCATTCTATCTTGTCACAGAGAATGGCTCCATTG +
Preference number: 6 (lower is better)
Translates to: GGVTGSAQSSTS*HSILSQRMAPL
Trigger: CAATGGAGCCATTCTCTGTGACAAGATAGAATGCCAGGATGTGCTGGACTGTGCCGACCCTGTAACGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS TCA 72 bp CTCCCAAGTCCAGATTTTTCATCCAACCCAGCCATTTaGGCTGAAAACGGCCTGCTCAAGCCATCGGGTCCT +
Preference number: 6 (lower is better)
Translates to: LPSPDFSSNPAI*AENGLLKPSGP
Trigger: AGGACCCGATGGCTTGAGCAGGCCGTTTTCAGCTCAAATGGCTGGGTTGGATGAAAAATCTGGACTTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS TCA 72 bp CCAACAGGACCCACAGAGCCAGGCATTAGTCCTACTTaGCTCCCAAGTCCAGATTTTTCATCCAACCCAGCC +
Preference number: 6 (lower is better)
Translates to: PTGPTEPGISPT*LPSPDFSSNPA
Trigger: GGCTGGGTTGGATGAAAAATCTGGACTTGGGAGTCAAGTAGGACTAATGCCTGGCTCTGTGGGTCCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS CCA 72 bp GGATCAATCCAGTATTCACCACTCTGCTTTGCGGAATaGCAAAGCTTTAGGTCATCACACGTGCGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: GSIQYSPLCFAE*QSFRSSHVRAG
Trigger: CCCAGCCCGCACGTGTGATGACCTAAAGCTTTGCCATTCCGCAAAGCAGAGTGGTGAATACTGGATTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CAA 72 bp GGGTCGGCACAGTCCAGCACATCCTGGCATTCTATCTaGTCACAGAGAATGGCTCCATTGTCACAGACACAG +
Preference number: 6 (lower is better)
Translates to: GSAQSSTSWHSI*SQRMAPLSQTQ
Trigger: CTGTGTCTGTGACAATGGAGCCATTCTCTGTGACAAGATAGAATGCCAGGATGTGCTGGACTGTGCCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS CCA 72 bp ATCAGGAGCCGCCTGATCTTCAGTAAACTCAGGAAGTaGATCTGGCATGCTTTCATCATAGTGCCCCATGAT +
Preference number: 6 (lower is better)
Translates to: IRSRLIFSKLRK*IWHAFIIVPHD
Trigger: ATCATGGGGCACTATGATGAAAGCATGCCAGATCCACTTCCTGAGTTTACTGAAGATCAGGCGGCTCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CAA 90 bp GAGATAGCAGCAACTCTAGGATCCAAAAGCCTAATAAGGCTGCTATaGGGTATAGCACAGATGAGTGGCAGGTGGCCAGAGTTCTCAAGA +
Preference number: 6 (lower is better)
Translates to: EIAATLGSKSLIRLL*GIAQMSGRWPEFSR
Trigger: TCTTGAGAACTCTGGCCACCTGCCACTCATCTGTGCTATACCCAATAGCAGCCTTATTAGGCTTTTGGATCCTAGAGTTGCTGCTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649966.1
CDS GCA 72 bp CCTTTTGTCCCTTTCTTCCTCTACCAAAATTGGTATTaGCACCTCCAGGTGTTTGTGAACAGACAGGACAGC +
Preference number: 6 (lower is better)
Translates to: PFVPFFLYQNWY*HLQVFVNRQDS
Trigger: GCTGTCCTGTCTGTTCACAAACACCTGGAGGTGGCAATACCAATTTTGGTAGAGGAAGAAAGGGACAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374866.9
ENST00000618828.1
ENST00000649966.1
CDS TCA 72 bp ATTTCTTCACCATATCCTTCACCAGTGGCTCGATGTTaGCTCTCAGCAGTCTTCCTAGAGAATCAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: ISSPYPSPVARC*LSAVFLENQKQ
Trigger: CTGCTTCTGATTCTCTAGGAAGACTGCTGAGAGTCAACATCGAGCCACTGGTGAAGGATATGGTGAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649966.1
CDS CAA 72 bp CTAGCCCAGCTAGAAAAGGAATACTTTCACTTACTCTaGCACCATCATTTCCAGCTGTGCCTTCAGCACCTT +
Preference number: 6 (lower is better)
Translates to: LAQLEKEYFHLL*HHHFQLCLQHL
Trigger: AAGGTGCTGAAGGCACAGCTGGAAATGATGGTGCAAGAGTAAGTGAAAGTATTCCTTTTCTAGCTGGGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470524.2
CDS CAA 90 bp GGATCAACTTCAAACAGTCAAAGTTCTTGTGAATGGCGGTGGTCATaGATGGTGGTGCTCATTGTCGATGTGTCTTGGCTTACTTTACAC +
Preference number: 6 (lower is better)
Translates to: GSTSNSQSSCEWRWS*MVVLIVDVSWLTLH
Trigger: GTGTAAAGTAAGCCAAGACACATCGACAATGAGCACCACCATCAATGACCACCGCCATTCACAAGAACTTTGACTGTTTGAAGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS CAA 72 bp TATTTCTTCACCATATCCTTCACCAGTGGCTCGATGTaGACTCTCAGCAGTCTTCCTAGAGAATCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: YFFTISFTSGSM*TLSSLPRESEA
Trigger: TGCTTCTGATTCTCTAGGAAGACTGCTGAGAGTCAACATCGAGCCACTGGTGAAGGATATGGTGAAGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649966.1
CDS TCA 72 bp TTCCAAATGTCCCTGTTTAAGTACATCTGGCCATTCTaGGTGCAGGCTATTTCTTCACCATATCCTTCATCC +
Preference number: 6 (lower is better)
Translates to: FQMSLFKYIWPF*VQAISSPYPSS
Trigger: GGATGAAGGATATGGTGAAGAAATAGCCTGCACTCAGAATGGCCAGATGTACTTAAACAGGGACATTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374866.9
ENST00000618828.1
CDS TCA 72 bp TTCCAAATGTCCCTGTTTAAGTACATCTGGCCATTCTaGGTGCAGGCTATTTCTTCACCATATCCTTCACCA +
Preference number: 6 (lower is better)
Translates to: FQMSLFKYIWPF*VQAISSPYPSP
Trigger: TGGTGAAGGATATGGTGAAGAAATAGCCTGCACTCAGAATGGCCAGATGTACTTAAACAGGGACATTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649966.1