RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL5A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130635

Ensembl transcript IDs: ENST00000371817.8, ENST00000371820.3, ENST00000460264.5, ENST00000463925.1, ENST00000464187.1, ENST00000465877.1, ENST00000469093.1, ENST00000618395.4

Found 904 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCACTGTCCAGGGTCAGGACGTGCACGGGACACTCACGAACGAATaGCATGCTGAGGTCACGAGGTTGCTCTCGGGAGCCCGGGCTCGG +
Preference number: 1 (lower is better)
Translates to: FTVQGQDVHGTLTNE*HAEVTRLLSGARAR
Trigger: CCGAGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCACGTCCTGACCCTGGACAGTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 90 bp AGGTGGGAGGGGAGGGAGAAGCCTTCACTGTCCAGGGTCAGGACGTaGACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGT +
Preference number: 1 (lower is better)
Translates to: RWEGREKPSLSRVRT*TGHSRTNGMLRSRG
Trigger: ACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCACGTCCTGACCCTGGACAGTGAAGGCTTCTCCCTCCCCTCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 90 bp CGCACCGGGGCGGGAGAGCGCAGGAGGGAGTGTGCTTGGCTATCCTaGCCAGTGGAAAGGAAAGTGACGTGCATTGATCTTAGAGTCCTT +
Preference number: 1 (lower is better)
Translates to: RTGAGERRRECAWLS*PVERKVTCIDLRVL
Trigger: AAGGACTCTAAGATCAATGCACGTCACTTTCCTTTCCACTGGGCAGGATAGCCAAGCACACTCCCTCCTGCGCTCTCCCGCCCCGGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR TCA 90 bp CCCGCCCCGAGCTCTGGAGCCGCTGACGCTCGCATCCAGGACATTTaGGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAG +
Preference number: 1 (lower is better)
Translates to: PAPSSGAADARIQDI*DGNPNRLLGKDVLQ
Trigger: CTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCTGGATGCGAGCGTCAGCGGCTCCAGAGCTCGGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 90 bp CCCAAGGGCCCAGCCTGCATTTCCCATGGTAGAAGGAAAAGGCGCTaGACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGC +
Preference number: 1 (lower is better)
Translates to: PKGPACISHGRRKRR*TRATFHSEEIAFPG
Trigger: GCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATGGGAAATGCAGGCTGGGCCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 90 bp AAATCCACGCTGGCGGTGTTTTGTTCCTCCTGGGTGGCTTGTTTGTaGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCGG +
Preference number: 1 (lower is better)
Translates to: KSTLAVFCSSWVACL*LPKLELHSGGGGGR
Trigger: CCGACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCACCCAGGAGGAACAAAACACCGCCAGCGTGGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR TCA 90 bp GCAGGAGGGAGTGTGCTTGGCTATCCTGCCCAGTGGAAAGGAAAGTaGCGTGCATTGATCTTAGAGTCCTTGGCAACAGACTGTGGAGGC +
Preference number: 1 (lower is better)
Translates to: AGGSVLGYPAQWKGK*RALILESLATDCGG
Trigger: GCCTCCACAGTCTGTTGCCAAGGACTCTAAGATCAATGCACGTCACTTTCCTTTCCACTGGGCAGGATAGCCAAGCACACTCCCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 90 bp AGACTTCCTATTTCTAATCAGAACGGTACTGCAACCCAGAATCCATaGCTCGCCCATTCTGTCCGTGGGACTGAGACTGGGTTTCCGTGC +
Preference number: 1 (lower is better)
Translates to: RLPISNQNGTATQNP*LAHSVRGTETGFPC
Trigger: GCACGGAAACCCAGTCTCAGTCCCACGGACAGAATGGGCGAGGCATGGATTCTGGGTTGCAGTACCGTTCTGATTAGAAATAGGAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 90 bp GGGGCAAACTTCCAATTTATTGCACGTTCTTGGCCAGGGCGGGGGTaGGGAGACTTCCTATTTCTAATCAGAACGGTACTGCAACCCAGA +
Preference number: 1 (lower is better)
Translates to: GANFQFIARSWPGRG*GDFLFLIRTVLQPR
Trigger: TCTGGGTTGCAGTACCGTTCTGATTAGAAATAGGAAGTCTCCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAATTGGAAGTTTGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 90 bp GGAAATTTGGAAAATCCACGCTGGCGGTGTTTTGTTCCTCCTGGGTaGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTG +
Preference number: 1 (lower is better)
Translates to: GNLENPRWRCFVPPG*LVCGFLSWNCILVV
Trigger: CACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCACCCAGGAGGAACAAAACACCGCCAGCGTGGATTTTCCAAATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 90 bp CCAGGGAAATTTGGAAAATCCACGCTGGCGGTGTTTTGTTCCTCCTaGGTGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGT +
Preference number: 1 (lower is better)
Translates to: PGKFGKSTLAVFCSS*VACLWLPKLELHSG
Trigger: ACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCACCCAGGAGGAACAAAACACCGCCAGCGTGGATTTTCCAAATTTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTaGAGAGACTCATGGAGTTCATTGTACATTACTCCATCTACCGAG +
Preference number: 1 (lower is better)
Translates to: GIQIGYLEKTCCRQP*RDSWSSLYITPSTE
Trigger: CTCGGTAGATGGAGTAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 90 bp CCATGCCTCGCCCATTCTGTCCGTGGGACTGAGACTGGGTTTCCGTaGATGATTGAAAGCCAGGCACACTTAACATTTATAACAATACAA +
Preference number: 1 (lower is better)
Translates to: PCLAHSVRGTETGFP*MIESQAHLTFITIQ
Trigger: TTGTATTGTTATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGTCCCACGGACAGAATGGGCGAGGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTaGTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATT +
Preference number: 1 (lower is better)
Translates to: RTFEMGIQIGYLEKT*CRQPWRDSWSSLYI
Trigger: AATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 90 bp ACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTaGAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTACT +
Preference number: 1 (lower is better)
Translates to: TFEMGIQIGYLEKTC*RQPWRDSWSSLYIT
Trigger: AGTAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 90 bp ATAAGCACCTTTAATCCATCGGGAAGGCACCTGCAGAATGACATTTaGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCT +
Preference number: 1 (lower is better)
Translates to: ISTFNPSGRHLQNDI*PLNGSCWRLLKTEA
Trigger: AGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGGATTAAAGGTGCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR TCA 90 bp CAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTaGAGTTCAGTACAAATTATAACAACTTTGAAGGGACCACAGAGG +
Preference number: 1 (lower is better)
Translates to: QYTVARVVWGERDTF*SSVQIITTLKGPQR
Trigger: CCTCTGTGGTCCCTTCAAAGTTGTTATAATTTGTACTGAACTTCAAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGAACGAATGGCATGCTaGGGTCACGAGGTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLERMAC*GHEVAL
Trigger: GAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTC...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTCCCCTCGGGTCCTCCTaGCCACAGACGGCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAPLGSS*PQTAAP
Trigger: GGGGGCTGCCGTCTGTGGGCAGGAGGACCCGAGGGG...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGAACGAATGGCATGCTaGGGTCACGAGGTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAERMAC*GHEVAL
Trigger: GAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACGCTCCCGGGGCGCGTaGGTGTGGACAGAGCGTGGG +
Preference number: 2 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTRSRGA*VWTERG
Trigger: CCCACGCTCTGTCCACACCCACGCGCCCCGGGAGCG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACATGGGTCGGGCGAGCTaGGGGGCTGGAGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDMGRAS*GAGGMA
Trigger: GGCCATGCCTCCAGCCCCCCAGCTCGCCCGACCCAT...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCATGGGTCGGGCGAGCTaGGGGGCTGGAGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSMGRAS*GAGGMA
Trigger: GGCCATGCCTCCAGCCCCCCAGCTCGCCCGACCCAT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACCTGAGGTCACGAGGTTaGTCTCGGGAGCCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYLRSRG*SREPGL
Trigger: GAGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAG...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGCGCTCCCGGGGCGCGTaGGTGTGGACAGAGCGTGGG +
Preference number: 2 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVRSRGA*VWTERG
Trigger: CCCACGCTCTGTCCACACCCACGCGCCCCGGGAGCG...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCCCTCCCCCAACCCCTaGGACCTATTCACGAACAGG +
Preference number: 2 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDPSPNP*DLFTNR
Trigger: CCTGTTCGTGAATAGGTCTCAGGGGTTGGGGGAGGG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGGGCGGGCCCAGGCGCTaGGGTGCAGCTAGGTCATGT +
Preference number: 2 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTGGPRR*GAARSC
Trigger: ACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCC...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCTTTATTGCACGTTCTTaGCCAGGGCGGGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVFIARS*PGRGWG
Trigger: TCCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAA...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACATCCAGGGTCAGGACGTaGACGGGACACTCACGAACG +
Preference number: 2 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTSRVRT*TGHSRT
Trigger: CGTTCGTGAGTGTCCCGTGCACGTCCTGACCCTGGA...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACATCCCACACCCCGTGGTaGCGAGGCGTAGATGAAGTC +
Preference number: 2 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTSHTPW*RGVDEV
Trigger: GACTTCATCTACGCCTCGGCACCACGGGGTGTGGGA...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTTCTGTCCGTGGGACTaGGACTGGGTTTCCGTGCAT +
Preference number: 2 (lower is better)
Translates to: PNRLLGKDVLQAALERLMFCPWD*DWVSVH
Trigger: ATGCACGGAAACCCAGTCTCAGTCCCACGGACAGAA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCATCGGGAAGGCACCTaGAGAATGACATTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVHREGT*RMTFGL
Trigger: GAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTTACTTGGAAAAGACGTaGTGCAGGCAGCCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAYLEKT*CRQPWR
Trigger: TCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTA...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGGGTCCCACACCCCGTaGTGCCGAGGCGTAGATGAA +
Preference number: 2 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLGSHTP*CRGVDE
Trigger: TTCATCTACGCCTCGGCACCACGGGGTGTGGGACCC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGCTGTTCTCTCCGGGCTaGGGTCCCACACCCCGTGGT +
Preference number: 2 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVLFSPG*GPTPRG
Trigger: ACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAG...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCTATAGTGTCCAAATCTaGCAGTCCCTCCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVYSVQI*QSLPQP
Trigger: GGGTTGGGGGAGGGACTGCCAGATTTGGACACTATA...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGCCCTCCCCCAACCCCTaGGACCTATTCACGAACAGG +
Preference number: 2 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTPSPNP*DLFTNR
Trigger: CCTGTTCGTGAATAGGTCTCAGGGGTTGGGGGAGGG...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACACACTCACGAACGAATaGCATGCTGAGGTCACGAGG +
Preference number: 2 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDTLTNE*HAEVTR
Trigger: CCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGT...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTATAGTGTCCAAATCTaGCAGTCCCTCCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: PNRLLGKDVLQAALERLMYSVQI*QSLPQP
Trigger: GGGTTGGGGGAGGGACTGCCAGATTTGGACACTATA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATGCTGGAACTGCATTCTaGTGGTGGTGGGGGTCGGGG +
Preference number: 2 (lower is better)
Translates to: LSKPDFSLARARLTFQGNAGTAF*WWWGSG
Trigger: CCCCGACCCCCACCACCACCAGAATGCAGTTCCAGC...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CAA 90 bp GAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATaGTACATTACTCCATCTACCGAGGCAGCGCATGGCATGACTGAA +
Preference number: 2 (lower is better)
Translates to: EKTCCRQPWRDSWSS*YITPSTEAAHGMTE
Trigger: TTCAGTCATGCCATGCGCTGCCTCGGTAGATGGAGTAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CAA 90 bp ACGCTCGCATCCAGGACATTTGAGATGGGAATCCAAATAGGCTACTaGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGT +
Preference number: 2 (lower is better)
Translates to: TLASRTFEMGIQIGY*EKTCCRQPWRDSWS
Trigger: ACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCTGGATGCGAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGAAACGGAGGCTTTGGTaGTGGTGGGATGACCTTTAC +
Preference number: 2 (lower is better)
Translates to: PNRLLGKDVLQAALERLMKRRLW*WWDDLY
Trigger: GTAAAGGTCATCCCACCATCACCAAAGCCTCCGTTT...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTAAGGCACCTGCAGAATaGCATTTGGCCTCTAAATGG +
Preference number: 2 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAKAPAE*HLASKW
Trigger: CCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTT...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACTGGGTTTCCGTGCATaGTTGAAAGCCAGGCACACT +
Preference number: 2 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTLGFRA*LKARHT
Trigger: AGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTCGCATCCAGGACATTTaGGATGGGAATCCAAATAGG +
Preference number: 2 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLARIQDI*DGNPNR
Trigger: CCTATTTGGATTCCCATCTCAAATGTCCTGGATGCG...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTCTGAGGTCACGAGGTTaGTCTCGGGAGCCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: FYCNILWLEWSGENGTHFLRSRG*SREPGL
Trigger: GAGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAG...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGTCCAGGGTCAGGACGTaGACGGGACACTCACGAACG +
Preference number: 2 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRSRVRT*TGHSRT
Trigger: CGTTCGTGAGTGTCCCGTGCACGTCCTGACCCTGGA...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGGCAGCATAAATTCTTaGTGCCCCGGGGCAAACTTC +
Preference number: 2 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIGSINS*CPGANF
Trigger: GAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTATTTATTGCACGTTCTTaGCCAGGGCGGGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLFIARS*PGRGWG
Trigger: TCCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAA...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATACTGCATTCTGGTGGTaGTGGGGGTCGGGGACAGCA +
Preference number: 2 (lower is better)
Translates to: LSKPDFSLARARLTFQGNTAFWW*WGSGTA
Trigger: TGCTGTCCCCGACCCCCACCACCACCAGAATGCAGT...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGTTTCCGTGCATGATTaGAAGCCAGGCACACTTAAC +
Preference number: 2 (lower is better)
Translates to: PNRLLGKDVLQAALERLMVSVHD*KPGTLN
Trigger: GTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAAC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTAAACTTCCAATTTATTaGACGTTCTTGGCCAGGGCG +
Preference number: 2 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAKLPIY*TFLARA
Trigger: CGCCCTGGCCAAGAACGTGCAATAAATTGGAAGTTT...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGGGTCCCACACCCCGTaGTGCCGAGGCGTAGATGAA +
Preference number: 2 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEGSHTP*CRGVDE
Trigger: TTCATCTACGCCTCGGCACCACGGGGTGTGGGACCC...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAGTTTCCGTGCATGATTaGAAGCCAGGCACACTTAAC +
Preference number: 2 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTVSVHD*KPGTLN
Trigger: GTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAAC...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCGAATCAAAAACTGTCTaGAAAGGGGCACTGGTACCT +
Preference number: 2 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSESKTV*KGALVP
Trigger: AGGTACCAGTGCCCCTTTTCAGACAGTTTTTGATTC...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCAGTGGAAAGGAAAGTaGCGTGCATTGATCTTAGAG +
Preference number: 2 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDQWKGK*RALILE
Trigger: CTCTAAGATCAATGCACGTCACTTTCCTTTCCACTG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGAGGCAGCGCATGGCATaGCTGAACGGCTTGGAACAA +
Preference number: 2 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRRQRMA*LNGLEQ
Trigger: TTGTTCCAAGCCGTTCAGTCATGCCATGCGCTGCCT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTGGCCAGGGTCCCCAGTaGGCCTTCAAGGAGACCTTA +
Preference number: 2 (lower is better)
Translates to: FYCNILWLEWSGENGTHFGQGPQ*AFKETL
Trigger: TAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCC...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCTGCAGAATGACATTTaGCCTCTAAATGGATCGTGT +
Preference number: 2 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVLQNDI*PLNGSC
Trigger: ACACGATCCATTTAGAGGCCAAATGTCATTCTGCAG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGGTGGTTTCCCTGCCCTaGACATTCTCCCATCAGGCT +
Preference number: 2 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRVVSLP*TFSHQA
Trigger: AGCCTGATGGGAGAATGTCCAGGGCAGGGAAACCAC...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGTTGGTGATGGTGGGATaGCCTTTACGAGGCTTACCT +
Preference number: 2 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTLVMVG*PLRGLP
Trigger: AGGTAAGCCTCGTAAAGGTCATCCCACCATCACCAA...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGAGCGCATGGCATGACTaGACGGCTTGGAACAAACAC +
Preference number: 2 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRSAWHD*TAWNKH
Trigger: GTGTTTGTTCCAAGCCGTTCAGTCATGCCATGCGCT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGAACCAAATATAATCTaGTATGGTCACACCACAGAC +
Preference number: 2 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAEPNII*YGHTTD
Trigger: GTCTGTGGTGTGACCATAGCAGATTATATTTGGTTC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGACACTCACGAACGAATaGCATGCTGAGGTCACGAGG +
Preference number: 2 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRTLTNE*HAEVTR
Trigger: CCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCCATTTGGCCTCTAAATaGATCGTGTTGGAGGTTGTT +
Preference number: 2 (lower is better)
Translates to: FKSSRHNPVLITALGSGRHLASK*IVLEVV
Trigger: AACAACCTCCAACACGATCCATTTAGAGGCCAAATG...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCTGCAGAATGACATTTaGCCTCTAAATGGATCGTGT +
Preference number: 2 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDLQNDI*PLNGSC
Trigger: ACACGATCCATTTAGAGGCCAAATGTCATTCTGCAG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR TCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGAAGGCACCTGCAGAATaGCATTTGGCCTCTAAATGG +
Preference number: 2 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTKAPAE*HLASKW
Trigger: CCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTT...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATGAGACTGGGTTTCCGTaGATGATTGAAAGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: LSKPDFSLARARLTFQGNETGFP*MIESQA
Trigger: TGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTC...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATTGTGCTTGGCTATCCTaGCCAGTGGAAAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: LSKPDFSLARARLTFQGNCAWLS*PVERKV
Trigger: CACTTTCCTTTCCACTGGGCAGGATAGCCAAGCACA...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTCATCGGGAAGGCACCTaGAGAATGACATTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: FYCNILWLEWSGENGTHFHREGT*RMTFGL
Trigger: GAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATG...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTTTCCTAAGCTGGAACTaGATTCTGGTGGTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: FYCNILWLEWSGENGTHFFLSWN*ILVVVG
Trigger: CCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAA...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCCTAAATGGATCGTGTTaGAGGTTGTTAAAAACGGAG +
Preference number: 2 (lower is better)
Translates to: HGRRKRRCTRATFHSEEILNGSC*RLLKTE
Trigger: CTCCGTTTTTAACAACCTCCAACACGATCCATTTAG...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATTTGGAAAATCCACGCTaGCGGTGTTTTGTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LSKPDFSLARARLTFQGNLENPR*RCFVPP
Trigger: AGGAGGAACAAAACACCGCCAGCGTGGATTTTCCAA...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CAA 90 bp ATCTGCTATGGTCACACCACAGACAATGCAGGAAGAGGCTTTTTATaGCTTGTGTGTGTTTTCAAATCAAGTAGGCACAACCCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: ICYGHTTDNAGRGFL*LVCVFKSSRHNPVL
Trigger: GAGGACTGGGTTGTGCCTACTTGATTTGAAAACACACACAAGCAATAAAAAGCCTCTTCCTGCATTGTCTGTGGTGTGACCATAGCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTTTTGTTCCTCCTGGGTaGCTTGTTTGTGGCTTCCTA +
Preference number: 2 (lower is better)
Translates to: FYCNILWLEWSGENGTHFFVPPG*LVCGFL
Trigger: TAGGAAGCCACAAACAAGCCACCCAGGAGGAACAAA...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGGAAAGGAAAGTGACGTaGATTGATCTTAGAGTCCTT +
Preference number: 2 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRERKVT*IDLRVL
Trigger: AAGGACTCTAAGATCAATGCACGTCACTTTCCTTTC...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATTCACACCACAGACAATaGAGGAAGAGGCTTTTTATT +
Preference number: 2 (lower is better)
Translates to: LSKPDFSLARARLTFQGNSHHRQ*RKRLFI
Trigger: AATAAAAAGCCTCTTCCTGCATTGTCTGTGGTGTGA...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGAAATATAATCTGCTATaGTCACACCACAGACAATGC +
Preference number: 2 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRKYNLL*SHHRQC
Trigger: GCATTGTCTGTGGTGTGACCATAGCAGATTATATTT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTCCCTGGAGAGACTCATaGAGTTCATTGTACATTACT +
Preference number: 2 (lower is better)
Translates to: FYCNILWLEWSGENGTHFPWRDS*SSLYIT
Trigger: AGTAATGTACAATGAACTCCATGAGTCTCTCCAGGG...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGCTGAGGTCACGAGGTaGCTCTCGGGAGCCCGGGCT +
Preference number: 3 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGAEVTR*LSGARA
Trigger: AGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp GTGGGTGTGGACAGAGCGTGGGGCGGGCCCAGGCGCTaGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: VGVDRAWGGPRR*GAARSCDSAPG
Trigger: ACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCTGTCCACACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR TCA 72 bp GGACGTGCACGGGACACTCACGAACGAATGGCATGCTaGGGTCACGAGGTTGCTCTCGGGAGCCCGGGCTCG +
Preference number: 3 (lower is better)
Translates to: GRARDTHERMAC*GHEVALGSPGS
Trigger: CGAGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCACGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 72 bp TGGACGCACCGGGGCGGGAGAGCGCAGGAGGGAGTGTaGTTGGCTATCCTGCCCAGTGGAAAGGAAAGTGAC +
Preference number: 3 (lower is better)
Translates to: WTHRGGRAQEGV*LAILPSGKESD
Trigger: GTCACTTTCCTTTCCACTGGGCAGGATAGCCAAGCACACTCCCTCCTGCGCTCTCCCGCCCCGGTGCGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR TCA 72 bp AAAGGGGACCTCACCCGCCCCGAGCTCTGGAGCCGCTaGCGCTCGCATCCAGGACATTTGAGATGGGAATCC +
Preference number: 3 (lower is better)
Translates to: KGDLTRPELWSR*RSHPGHLRWES
Trigger: GGATTCCCATCTCAAATGTCCTGGATGCGAGCGTCAGCGGCTCCAGAGCTCGGGGCGGGTGAGGTCCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp CAGGGTCAGGACGTGCACGGGACACTCACGAACGAATaGCATGCTGAGGTCACGAGGTTGCTCTCGGGAGCC +
Preference number: 3 (lower is better)
Translates to: QGQDVHGTLTNE*HAEVTRLLSGA
Trigger: GGCTCCCGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCACGTCCTGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGCTGAGGTCACGAGGTaGCTCTCGGGAGCCCGGGCT +
Preference number: 3 (lower is better)
Translates to: PNRLLGKDVLQAALERLMAEVTR*LSGARA
Trigger: AGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp GTTCCTCCTGGGTGGCTTGTTTGTGGCTTCCTAAGCTaGAACTGCATTCTGGTGGTGGTGGGGGTCGGGGAC +
Preference number: 3 (lower is better)
Translates to: VPPGWLVCGFLS*NCILVVVGVGD
Trigger: GTCCCCGACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCACCCAGGAGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATGGCAGCATAAATTCTaGCTGCCCCGGGGCAAACTT +
Preference number: 3 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKWQHKF*LPRGKL
Trigger: AAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCAGGAGGGAGTGTGCTaGGCTATCCTGCCCAGTGGA +
Preference number: 3 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDQEGVC*AILPSG
Trigger: TCCACTGGGCAGGATAGCCAAGCACACTCCCTCCTG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 72 bp GCGGGAGAGCGCAGGAGGGAGTGTGCTTGGCTATCCTaGCCAGTGGAAAGGAAAGTGACGTGCATTGATCTT +
Preference number: 3 (lower is better)
Translates to: AGERRRECAWLS*PVERKVTCIDL
Trigger: AAGATCAATGCACGTCACTTTCCTTTCCACTGGGCAGGATAGCCAAGCACACTCCCTCCTGCGCTCTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCATTTATTGCACGTTCTaGGCCAGGGCGGGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIIYCTF*ARAGVG
Trigger: CCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAAT...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 72 bp CCAGCCTGCATTTCCCATGGTAGAAGGAAAAGGCGCTaGACCCGGGCAACTTTTCACAGTGAAGAGATCGCC +
Preference number: 3 (lower is better)
Translates to: PACISHGRRKRR*TRATFHSEEIA
Trigger: GGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATGGGAAATGCAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp CTGGCGGTGTTTTGTTCCTCCTGGGTGGCTTGTTTGTaGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGT +
Preference number: 3 (lower is better)
Translates to: LAVFCSSWVACL*LPKLELHSGGG
Trigger: ACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCACCCAGGAGGAACAAAACACCGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 72 bp ATTTCTAATCAGAACGGTACTGCAACCCAGAATCCATaGCTCGCCCATTCTGTCCGTGGGACTGAGACTGGG +
Preference number: 3 (lower is better)
Translates to: ISNQNGTATQNP*LAHSVRGTETG
Trigger: CCCAGTCTCAGTCCCACGGACAGAATGGGCGAGGCATGGATTCTGGGTTGCAGTACCGTTCTGATTAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp TTTGAAGAGATGAAGGTGACAGTCATTGGCACATGCTaGCATCCTGGGCTCCAGAGACTCTCCAAGCCAGAC +
Preference number: 3 (lower is better)
Translates to: FEEMKVTVIGTC*HPGLQRLSKPD
Trigger: GTCTGGCTTGGAGAGTCTCTGGAGCCCAGGATGCCAGCATGTGCCAATGACTGTCACCTTCATCTCTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGGATCGTGTTGGAGGTaGTTAAAAACGGAGGCTTTG +
Preference number: 3 (lower is better)
Translates to: PNRLLGKDVLQAALERLMGSCWR*LKTEAL
Trigger: CAAAGCCTCCGTTTTTAACAACCTCCAACACGATCC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR TCA 72 bp AGCTCTGGAGCCGCTGACGCTCGCATCCAGGACATTTaGGATGGGAATCCAAATAGGCTACTTGGAAAAGAC +
Preference number: 3 (lower is better)
Translates to: SSGAADARIQDI*DGNPNRLLGKD
Trigger: GTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCTGGATGCGAGCGTCAGCGGCTCCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 72 bp GCTTGGCTATCCTGCCCAGTGGAAAGGAAAGTGACGTaGATTGATCTTAGAGTCCTTGGCAACAGACTGTGG +
Preference number: 3 (lower is better)
Translates to: AWLSCPVERKVT*IDLRVLGNRLW
Trigger: CCACAGTCTGTTGCCAAGGACTCTAAGATCAATGCACGTCACTTTCCTTTCCACTGGGCAGGATAGCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp GAAAATCCACGCTGGCGGTGTTTTGTTCCTCCTGGGTaGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATT +
Preference number: 3 (lower is better)
Translates to: ENPRWRCFVPPG*LVCGFLSWNCI
Trigger: AATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCACCCAGGAGGAACAAAACACCGCCAGCGTGGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTATTTATTGCACGTTCTaGGCCAGGGCGGGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: FYCNILWLEWSGENGTHFIYCTF*ARAGVG
Trigger: CCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAAT...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR TCA 72 bp AGTGTGCTTGGCTATCCTGCCCAGTGGAAAGGAAAGTaGCGTGCATTGATCTTAGAGTCCTTGGCAACAGAC +
Preference number: 3 (lower is better)
Translates to: SVLGYPAQWKGK*RALILESLATD
Trigger: GTCTGTTGCCAAGGACTCTAAGATCAATGCACGTCACTTTCCTTTCCACTGGGCAGGATAGCCAAGCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTACCTTGGAACATTTTTaGAAGGTCAGGGGAAATACA +
Preference number: 3 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLATLEHF*KVRGNT
Trigger: TGTATTTCCCCTGACCTTCAAAAAATGTTCCAAGGT...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 72 bp GCCCATTCTGTCCGTGGGACTGAGACTGGGTTTCCGTaGATGATTGAAAGCCAGGCACACTTAACATTTATA +
Preference number: 3 (lower is better)
Translates to: AHSVRGTETGFP*MIESQAHLTFI
Trigger: TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGTCCCACGGACAGAATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp ATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTaGAGAGACTCATGGAGTTCATTGTACATTACTCCA +
Preference number: 3 (lower is better)
Translates to: IGYLEKTCCRQP*RDSWSSLYITP
Trigger: TGGAGTAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp CTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATTTaGAAAATCCACGCTGGCGGTGTTTTGTTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: LWQERDLLSREI*KIHAGGVLFLL
Trigger: CAGGAGGAACAAAACACCGCCAGCGTGGATTTTCCAAATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCTCTAAATGGATCGTGTaGGAGGTTGTTAAAAACGGA +
Preference number: 3 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSSKWIV*EVVKNG
Trigger: TCCGTTTTTAACAACCTCCAACACGATCCATTTAGA...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGTTGATCTTAGAGTCCTaGGCAACAGACTGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRLILES*ATDCGG
Trigger: GCCTCCACAGTCTGTTGCCAAGGACTCTAAGATCAA...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR-3UTR CAA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGACCTTGGAACATTTTTaGAAGGTCAGGGGAAATACA +
Preference number: 3 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWTLEHF*KVRGNT
Trigger: TGTATTTCCCCTGACCTTCAAAAAATGTTCCAAGGT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR TCA 72 bp TGTACATTACTCCATCTACCGAGGCAGCGCATGGCATaGCTGAACGGCTTGGAACAAACACAGAAATTAGCA +
Preference number: 3 (lower is better)
Translates to: CTLLHLPRQRMA*LNGLEQTQKLA
Trigger: TGCTAATTTCTGTGTTTGTTCCAAGCCGTTCAGTCATGCCATGCGCTGCCTCGGTAGATGGAGTAATGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 72 bp TGGTACCTGCTTTTCAATGGCAGCATAAATTCTTGCTaGCCCGGGGCAAACTTCCAATTTATTGCACGTTCT +
Preference number: 3 (lower is better)
Translates to: WYLLFNGSINSC*PGANFQFIARS
Trigger: AGAACGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTGAAAAGCAGGTACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp CTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTaGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTG +
Preference number: 3 (lower is better)
Translates to: LQNDIWPLNGSC*RLLKTEALVMV
Trigger: CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR GCA 72 bp ATTAGCACCACAAACATTCAGGAACCAAATATAATCTaGTATGGTCACACCACAGACAATGCAGGAAGAGGC +
Preference number: 3 (lower is better)
Translates to: ISTTNIQEPNII*YGHTTDNAGRG
Trigger: GCCTCTTCCTGCATTGTCTGTGGTGTGACCATAGCAGATTATATTTGGTTCCTGAATGTTTGTGGTGCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CCA 72 bp TTTAATCCATCGGGAAGGCACCTGCAGAATGACATTTaGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAA +
Preference number: 3 (lower is better)
Translates to: FNPSGRHLQNDI*PLNGSCWRLLK
Trigger: TTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGGATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGTTCGGCCCCAGCGCCTaGGTCTGTGGGCTGGTCGGG +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAFGPSA*VCGLVG
Trigger: CCCGACCAGCCCACAGACCCAGGCGCTGGGGCCGAA...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCCCGTTGGGCCTCGCTaGCCCCGCGGTCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLPVGPR*PRGPGF
Trigger: AAAGCCAGGACCGCGGGGGCAGCGAGGCCCAACGGG...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGCCTGGGTCTGTGGGCTaGTCGGGGTTCTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAPGSVG*SGFSSP
Trigger: GGGGGAGGAGAACCCCGACCAGCCCACAGACCCAGG...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCAGGTCCGGGAGGACCTaGGGGCCCCTTCGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLRSGRT*GPLRPK
Trigger: CTTGGGCCGAAGGGGCCCCCAGGTCCTCCCGGACCT...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCCAGGGGGCCCAGGGTaGCCACGCTCACCCATTGGG +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLPGGPG*PRSPIG
Trigger: CCCAATGGGTGAGCGTGGCCACCCTGGGCCCCCTGG...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGCGACATCCGGGCCTTTaGAAGATCGCCGCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEARHPGL*KIAAWR
Trigger: GCGCCACGCGGCGATCTTCCAAAGGCCCGGATGTCG...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTTGCACCCTGGGGGCCTaGAAGACCCTGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSACTLGA*KTLGAW
Trigger: CCAGGCGCCCAGGGTCTTCCAGGCCCCCAGGGTGCA...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTACCCACAGGGCCAGCTaGACCCGGGAGCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSATHRAS*TREPHR
Trigger: CCTGTGGGGCTCCCGGGTCCAGCTGGCCCTGTGGGT...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCTCCGGGAGGGCCTTTaGGTCCAGGGGGTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSALREGL*VQGVRQ
Trigger: CTGCCGGACCCCCTGGACCCAAAGGCCCTCCCGGAG...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCTGCCATCGGCCCCCTTaGCTCCTCGAGGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGCHRPP*LLEDLG
Trigger: ACCCAGGTCCTCGAGGAGTCAAGGGGGCCGATGGCA...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGCGGCTCCTAGCCCATaGAGCAAGCCGGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGAAPSP*SKPAPL
Trigger: AAGTGGGGCCGGCTTGCTTCATGGGCTAGGAGCCGC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGCTTTCCAGCGGGTATaGACGTCCATGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLAFQRV*TSMPAG
Trigger: CCCCGCCGGCATGGACGTCCATACCCGCTGGAAAGC...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCTGTCGGCGGTGCTGGTaGGAATTTCGGCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGCRRCW*EFRPQR
Trigger: GCGCTGGGGCCGAAATTCCCACCAGCACCGCCGACA...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGGGACCCATGGTTCCTaGAGGTCCGGGAAGACCCGC +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLGTHGS*RSGKTR
Trigger: GCGGGTCTTCCCGGACCTCCAGGAACCATGGGTCCC...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGAGGCCTGCAGGGCCTaGGTCACCCTTCGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGEACRA*VTLRPF
Trigger: GAAGGGACGAAGGGTGACCCAGGCCCTGCAGGCCTC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGGGACCGTCCGGGCCTaGGGATCCTGGGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAGTVRA*GSWETL
Trigger: CAAGGTCTCCCAGGATCCCCAGGCCCGGACGGTCCC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGGCATTCTGGTGGTGGTaGGGGTCGGGGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAAFWWW*GSGTAP
Trigger: TGGTGCTGTCCCCGACCCCCACCACCACCAGAATGC...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGCCCCCTCGCCATAGGTaGGGTCATCATACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAPPRHR*GHHTVR
Trigger: CCTCACCGTATGATGACCTCACCTATGGCGAGGGGG...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCTGGAGGTGTCGGCGGTaGTGGTGGGAATTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLWRCRR*WWEFRP
Trigger: GGGCCGAAATTCCCACCAGCACCGCCGACACCTCCA...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGGGCCAGGGTCCCCAGTaGGCCTTCAAGGAGACCTTA +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAGQGPQ*AFKETL
Trigger: TAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCC...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGACATCCGGGCCTTTaGAAGATCGCCGCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSARHPGL*KIAAWR
Trigger: GCGCCACGCGGCGATCTTCCAAAGGCCCGGATGTCG...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGCACTGGTTTCAGGCATaGGAGCAGCTTCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAHWFQA*EQLPWG
Trigger: CCCCCACGGAAGCTGCTCCCATGCCTGAAACCAGTG...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCCCCGACTTGGCCAGTaGGACCCATGGTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLPRLGQ*DPWFLE
Trigger: CTCCAGGAACCATGGGTCCCACTGGCCAAGTCGGGG...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGGGGCCGGTCTTGCCTTaGAAACCAGTCTCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAGPVLP*KPVSPL
Trigger: GAGAGGCGAGACTGGTTTCCAAGGCAAGACCGGCCC...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGGGCCCAGGTCTCCCTaGAATTCCGATGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAGPRSP*NSDGPS
Trigger: GCTGGGCCCATCGGAATTCCAGGGAGACCTGGGCCC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGCCAGCTGGGCCTTGTaGGCCTTTCTCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAASWAL*AFLARS
Trigger: GCTCCTGGCGAGAAAGGCCCACAAGGCCCAGCTGGC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTACCCTGCAGCCCCACTaGCCCAGGGGGTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSATLQPH*PRGSRK
Trigger: TTTCCTGGACCCCCTGGGCCAGTGGGGCTGCAGGGT...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCACCTGGGGGACCTTGTaGGCCATCAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLTWGTL*AISTWS
Trigger: GCTCCAGGTGCTGATGGCCCACAAGGTCCCCCAGGT...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGCCTGGATGCCTGGATTaGCAGGGGCTGGATGACCTC +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAPGCLD*QGLDDL
Trigger: GAGGTCATCCAGCCCCTGCCAATCCAGGCATCCAGG...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCTGTTCCGCCGCGTCCTaGATGCCTGGATTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGCSAAS*MPGLAG
Trigger: CCCTGCCAATCCAGGCATCCAGGACGCGGCGGAACA...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCAGAGATCGCCTTTCCTaGCTGCCCCTCGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLRDRLS*LPLGSS
Trigger: GGAGGACCCGAGGGGCAGCCAGGAAAGGCGATCTCT...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGCTGGAACTGCATTCTaGTGGTGGTGGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGAGTAF*WWWGSG
Trigger: CCCCGACCCCCACCACCACCAGAATGCAGTTCCAGC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGTCCTGCCAGGCCACTaGCTGGTAGCAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLVLPGH*LVAVVG
Trigger: ACCTACCACTGCTACCAGTCAGTGGCCTGGCAGGAC...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCTCCACGATGGGCACCTaGTCCACTTTGGGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLSTMGT*STLGVS
Trigger: CGACACCCCCAAAGTGGAGCAGGTGCCCATCGTGGA...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTAGGTGTCGGCGGTGCTaGTGGGAATTTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSARCRRC*WEFRPQ
Trigger: CTGGGGCCGAAATTCCCACCAGCACCGCCGACACCT...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTTCCCTGGAATTCCGATaGGCCCAGCGGCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSASLEFR*AQRLQL
Trigger: CAGCTGGAGCCGCTGGGCCCATCGGAATTCCAGGGA...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAACGCTCCCGGGGCGCGTaGGTGTGGACAGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKRSRGA*VWTERG
Trigger: CCCACGCTCTGTCCACACCCACGCGCCCCGGGAGCG...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGCCGGGCGGAGCGCGCTaGGCGCTTTCCAGCGGGTAT +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSPGGAR*ALSSGY
Trigger: ATACCCGCTGGAAAGCGCGCAGCGCGCTCCGCCCGG...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCTGGGGTGTCAGGTACTaGGGTGTCACAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGWGVRY*GVTVRA
Trigger: AGCCCTGACTGTGACACCGCAGTACCTGACACCCCA...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGTTGGAAAAGACGTGCTaGAGGCAGCCCTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEALEKTC*RQPWRD
Trigger: GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCCCCCGTTCTTCTTTGTaGCGGCGGCTGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGPRSSL*RRLFWK
Trigger: CTTCCAGAACAGCCGCCGCCACAAAGAAGAACGGGG...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCCCTGCTCGTTGTAGATaGAGACCAGGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGPARCR*RPGRPG
Trigger: GCCAGGCCTTCCTGGTCTCCATCTACAACGAGCAGG...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGATGTCGATCATGGGGTaGTCGCTGCGGTCGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAMSIMG*SLRSRN
Trigger: ATTCCTCGACCGCAGCGACCACCCCATGATCGACAT...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGACCTCCTTTCTCTCCTaGAGGGCCTTCTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEATSFLS*RAFFAR
Trigger: CCTGGCAAAGAAGGCCCTCCAGGAGAGAAAGGAGGT...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGACCCACAGGGCCAGCTaGACCCGGGAGCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSTHRAS*TREPHR
Trigger: CCTGTGGGGCTCCCGGGTCCAGCTGGCCCTGTGGGT...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAACCCCCTGGGGGCCGATaGGGCCAGTCTTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKPPGGR*GQSSQE
Trigger: CTCCTGGGAAGACTGGCCCCATCGGCCCCCAGGGGG...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CAA 72 bp ACGCACCGGGGCGGGAGAGCGCAGGAGGGAGTGTGCTaGGCTATCCTGCCCAGTGGAAAGGAAAGTGACGTG +
Preference number: 4 (lower is better)
Translates to: THRGGRAQEGVC*AILPSGKESDV
Trigger: CACGTCACTTTCCTTTCCACTGGGCAGGATAGCCAAGCACACTCCCTCCTGCGCTCTCCCGCCCCGGTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGTGCCACTTGCCATCTaGCAGGTTGATGCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAVPLAI*QVDAPE
Trigger: TTCCGGGGCATCAACCTGTCAGATGGCAAGTGGCAC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAGGCCAGGCTTCCCAGTaGTGCCCCGGGGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKGQASQ*CPGGLF
Trigger: AAAGAGGCCCCCGGGGCATCACTGGGAAGCCTGGCC...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGAACGAATGGCATGCTaGGGTCACGAGGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGERMAC*GHEVAL
Trigger: GAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCAGGCAGCGCATGGCATaGCTGAACGGCTTGGAACAA +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGRQRMA*LNGLEQ
Trigger: TTGTTCCAAGCCGTTCAGTCATGCCATGCGCTGCCT...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCCAGGAAGGCCTGGCTaGCTTTCTTGGCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLPGRPG*LSWLSQ
Trigger: CTGTGAAAGCCAAGAAAGGCAGCCAGGCCTTCCTGG...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCAGTCATAGTCCCCGATaGCGACGTCCTCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGSHSPR*RRPLPS
Trigger: GGAAGGAAGAGGACGTCGGCATCGGGGACTATGACT...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCCAGGGGGCCCTTCATTaGCTTTCAGTCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGQGALH*LSVQEL
Trigger: GAGCTCTTGGACTGAAAGGCAATGAAGGGCCCCCTG...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGGGTCCTGGCAAACCCTaGAGCCCCACTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSGPGKP*SPTGPG
Trigger: CCCTGGGCCAGTGGGGCTGCAGGGTTTGCCAGGACC...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGCAACCCAGAATCCATaGCTCGCCCATTCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGATQNP*LAHSVR
Trigger: ACGGACAGAATGGGCGAGGCATGGATTCTGGGTTGC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCTGGAAGGCTGCTCTTTaGGCCAGCGGGCCATTTTAC +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGWKAAL*ASGPFY
Trigger: GTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCA...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCCTCGGGGACCTCTGTaGTTTCTTTGGCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLPRGPL*FLWQLP
Trigger: TGGAAGCTGCCAAAGAAACCACAGAGGTCCCCGAGG...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCCTCAGTGCCAACCTaGCCTGCTGGAGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAPSVPT*PAGEWL
Trigger: AAGCCATTCTCCAGCAGGCCAGGTTGGCACTGAGGG...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCATTCCTGGAAGGCCTaGTTTCCCCAAGGGACCCTT +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLHSWKA*FPQGTL
Trigger: AAGGGTCCCTTGGGGAAACCAGGCCTTCCAGGAATG...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCTGGGTTTCCGTGCATaGTTGAAAGCCAGGCACACT +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLLGFRA*LKARHT
Trigger: AGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAG...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCAGCGCATGGCATGACTaGACGGCTTGGAACAAACAC +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGSAWHD*TAWNKH
Trigger: GTGTTTGTTCCAAGCCGTTCAGTCATGCCATGCGCT...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGCTCGAGTGAGGTCCTaGGCCAGCCGCGGGGACGGA +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAARVRS*ASRGDG
Trigger: TCCGTCCCCGCGGCTGGCGCAGGACCTCACTCGAGC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCTTCATCACCTTTCTaGCCGAAAAGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAPSSPF*PKRPCW
Trigger: CCAGCAGGGCCTTTTCGGGCAGAAAGGTGATGAAGG...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAACTGAGGTCACGAGGTTaGTCTCGGGAGCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKLRSRG*SREPGL
Trigger: GAGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAG...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGGCAGCATAAATTCTTaGTGCCCCGGGGCAAACTTC +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGGSINS*CPGANF
Trigger: GAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCCCCCTCGGGTCCTCCTaGCCACAGACGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRPLGSS*PQTAAP
Trigger: GGGGGCTGCCGTCTGTGGGCAGGAGGACCCGAGGGG...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGTCCCTGGAGCATCCTTaGTTAGGATCGACCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEASLEHP*LGSTQY
Trigger: ATACTGGGTCGATCCTAACCAAGGATGCTCCAGGGA...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGCGACCCGCTCCCCGTaGGCGCTCCGCTCGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMATRSP*ALRSSE
Trigger: CTCACTCGAGCGGAGCGCCCACGGGGAGCGGGTCGC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCTGGCGGCGGCTGTTCTaGAAGGGGCGGCTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSWRRLF*KGRLAR
Trigger: GCGCGCCAGCCGCCCCTTCCAGAACAGCCGCCGCCA...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGCAGCGCCTGGGTCTGTaGGCTGGTCGGGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSQRLGL*AGRGSP
Trigger: AGGAGAACCCCGACCAGCCCACAGACCCAGGCGCTG...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTAGGTCCGGGAGGACCTaGGGGCCCCTTCGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLARSGRT*GPLRPK
Trigger: CTTGGGCCGAAGGGGCCCCCAGGTCCTCCCGGACCT...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGGGCCATCTTCTCCCCTaGGACCGGGTGGGCCGATCT +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSGHLLP*DRVGRS
Trigger: AGATCGGCCCACCCGGTCCCAGGGGAGAAGATGGCC...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACCAGGAGGGCCAGCTaGGCCGTCACCTCCGGAGTT +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKTRRAS*AVTSGV
Trigger: AACTCCGGAGGTGACGGCCCAGCTGGCCCTCCTGGT...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATGGACCTCTCTCCCCTaGAGATCCCGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKWTSLP*RSRRAW
Trigger: CCAGGCCCTGCGGGATCTCCAGGGGAGAGAGGTCCA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGAGCTCCAGAGGGGCCTaGCTGTCCGATGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSSSRGA*LSDGAL
Trigger: CAAGGCCCCATCGGACAGCCAGGCCCCTCTGGAGCT...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCCCCCTGGGGGCCGATaGGGCCAGTCTTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVPPGGR*GQSSQE
Trigger: CTCCTGGGAAGACTGGCCCCATCGGCCCCCAGGGGG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCCCAGCTTCAGAGAGTTaGGAGAGCCGAAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGPASES*ESRRSL
Trigger: AAGAGATCTTCGGCTCTCTCAACTCTCTGAAGCTGG...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGAAAACAGAATCACATaGCCTAGACGCAGTCCACGG +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGENRIT*PRRSPR
Trigger: CCGTGGACTGCGTCTAGGTCATGTGATTCTGTTTTC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATACCAGGTGGAAGGCTaGTCTTTGGGCCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKYQVEG*SLGQRA
Trigger: GGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618395.4
CDS-3UTR GCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGAGACAAAGAGCAGCTaGTGGATGTCACCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLETKSS*WMSPSN
Trigger: GTTTGAGGGTGACATCCAGCAGCTGCTCTTTGTCTC...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTAGCCCCTTTCTCTCCTaGCGGCCCTGGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLASPFLS*RPWGSL
Trigger: CAGGGACCCCCAGGGCCGGCAGGAGAGAAAGGGGCT...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGAGACTGGGTTTCCGTaGATGATTGAAAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLETGFP*MIESQA
Trigger: TGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTC...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGAGCATAAATTCTTGCTaGCCCGGGGCAAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEASINSC*PGANFQ
Trigger: TTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCT...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGGCGACCCGCTCCCCGTaGGCGCTCCGCTCGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWATRSP*ALRSSE
Trigger: CTCACTCGAGCGGAGCGCCCACGGGGAGCGGGTCGC...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAACCACGGGCTTCTTGCTaGGGGTGGGCTCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKPRASC*GWAPSL
Trigger: TAGGGAAGGAGCCCACCCCCAGCAAGAAGCCCGTGG...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAGCCAACCTGGCCTGCTaGAGAATGGCTTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKANLAC*RMACAW
Trigger: CCAGGCGCAAGCCATTCTCCAGCAGGCCAGGTTGGC...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGACCCATCGGGCCAGCTaGTCCCCTCAGTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSTHRAS*SPQCQP
Trigger: AGGTTGGCACTGAGGGGACCAGCTGGCCCGATGGGT...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGTCTCCCGGAGGTCCTaGTGGGCCGGAAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAVSRRS*WAGRTR
Trigger: CCTGGTCCTTCCGGCCCACCAGGACCTCCGGGAGAC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGGCCCGTTTCTCCCGTaGGACCCTGAGGGCCGACCA +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAGPFLP*DPEGRP
Trigger: TGGTCGGCCCTCAGGGTCCCACGGGAGAAACGGGCC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGTCCCTGGAATTCCGATaGGCCCAGCGGCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSSLEFR*AQRLQL
Trigger: CAGCTGGAGCCGCTGGGCCCATCGGAATTCCAGGGA...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAGCCCTTAGCACCTTTTaGACCAGGCGGACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKALSTF*TRRTRQ
Trigger: CTGCCGGGTCCGCCTGGTCCAAAAGGTGCTAAGGGC...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGACCCTTCGGGCCAGTTaGACCCGAGGAGCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSTLRAS*TRGALS
Trigger: GCTAAGGGCTCCTCGGGTCCAACTGGCCCGAAGGGT...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAGGGTCCCACACCCCGTaGTGCCGAGGCGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKGSHTP*CRGVDE
Trigger: TTCATCTACGCCTCGGCACCACGGGGTGTGGGACCC...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGCCCTCCCCCAACCCCTaGGACCTATTCACGAACAGG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSPSPNP*DLFTNR
Trigger: CCTGTTCGTGAATAGGTCTCAGGGGTTGGGGGAGGG...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCTCGAGTGAGGTCCTaGGCCAGCCGCGGGGACGGA +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIARVRS*ASRGDG
Trigger: TCCGTCCCCGCGGCTGGCGCAGGACCTCACTCGAGC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACCCCGTTGGGCCTCGCTaGCCCCGCGGTCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYPVGPR*PRGPGF
Trigger: AAAGCCAGGACCGCGGGGGCAGCGAGGCCCAACGGG...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGGTCCTGGCAAACCCTaGAGCCCCACTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMGPGKP*SPTGPG
Trigger: CCCTGGGCCAGTGGGGCTGCAGGGTTTGCCAGGACC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGGGTCCTGGGTGGCCTaGCTCACCCTTCGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRGSWVA*LTLRAS
Trigger: ACTGGCCCGAAGGGTGAGGCAGGCCACCCAGGACCC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGTTCGGCCCCAGCGCCTaGGTCTGTGGGCTGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWFGPSA*VCGLVG
Trigger: CCCGACCAGCCCACAGACCCAGGCGCTGGGGCCGAA...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAAACCCCGGTCACCCTTaGGGCCAGTTTGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKNPGHP*GQFVQA
Trigger: TGCCTGGACAAACTGGCCCCAAGGGTGACCGGGGTT...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCTCCCGGAGGTCCTGGTaGGCCGGAAGGACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRSRRSW*AGRTRV
Trigger: GACCCTGGTCCTTCCGGCCCACCAGGACCTCCGGGA...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGAAGACCCTGGGCGCCTaGATTACCCTGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSKTLGA*ITLLSW
Trigger: CCAGGACAGCAGGGTAATCCAGGCGCCCAGGGTCTT...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCAGCTCCAGAGGGGCCTaGCTGTCCGATGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVSSRGA*LSDGAL
Trigger: CAAGGCCCCATCGGACAGCCAGGCCCCTCTGGAGCT...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACCTCCGGGAGGGCCTTTaGGTCCAGGGGGTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYLREGL*VQGVRQ
Trigger: CTGCCGGACCCCCTGGACCCAAAGGCCCTCCCGGAG...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCGGCGGGCCCAGGCGCTaGGGTGCAGCTAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSGGPRR*GAARSC
Trigger: ACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCC...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGGCCAGGTCTCCCTGTaGGACCCATCGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIGQVSL*DPSGQL
Trigger: CAGCTGGCCCGATGGGTCTCACAGGGAGACCTGGCC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTTGTCCGATGGGGCCTTaGGGACCTGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLACPMGP*GPVGPG
Trigger: TCCTGGGCCTACAGGTCCTCAAGGCCCCATCGGACA...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGCGGCTCCTAGCCCATaGAGCAAGCCGGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRAAPSP*SKPAPL
Trigger: AAGTGGGGCCGGCTTGCTTCATGGGCTAGGAGCCGC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGTTTCCGTGCATGATTaGAAGCCAGGCACACTTAAC +
Preference number: 4 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAVSVHD*KPGTLN
Trigger: GTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAAC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCGGGGTTCTGCTGCGTaGCCAGGGGCCGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVRGSAA*PGAVSS
Trigger: AGATGAAACGGCCCCTGGGCACGCAGCAGAACCCCG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGTGGGGTGTCAGGTACTaGGGTGTCACAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSWGVRY*GVTVRA
Trigger: AGCCCTGACTGTGACACCGCAGTACCTGACACCCCA...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCTGGAGGGCCTTCTTTaGCAGGGTGTCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDLEGLL*QGVPGV
Trigger: GACCCCCGGGACACCCTGGCAAAGAAGGCCCTCCAG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCAAGGCCAGGCTCACCTaGTTCGCCAGGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVKARLT*FARLAL
Trigger: AAGGGCGAGCCTGGCGAAGCAGGTGAGCCTGGCCTT...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCCTTTCTCTCCCTGTCTaGCTTCGGGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRLSLPV*LRGLRG
Trigger: GCCCCGCAGGCCCCGAAGGCAGACAGGGAGAGAAAG...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGCTTTCTCTCCCTGTCTaGCTTCGGGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMLSLPV*LRGLRG
Trigger: GCCCCGCAGGCCCCGAAGGCAGACAGGGAGAGAAAG...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAGGGTCCTGGGTGGCCTaGCTCACCCTTCGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTGSWVA*LTLRAS
Trigger: ACTGGCCCGAAGGGTGAGGCAGGCCACCCAGGACCC...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCATCGCCTTTCCTGGCTaGCCCTCGGGTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSIAFPG*PSGPPA
Trigger: GGCAGGAGGACCCGAGGGGCAGCCAGGAAAGGCGAT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACCGTCCAGCAGCTGGCTaGCGTCGATGTTCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYRPAAG*RRCSAA
Trigger: CGCGGCGGAACATCGACGCCAGCCAGCTGCTGGACG...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTGGGAGCAGCTTCCGTaGGGGTCGGGGTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMWEQLP*GSGSAP
Trigger: AGGAGCTGACCCCGACCCCCACGGAAGCTGCTCCCA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGTCCCAGCCCCTTCACTaGTTTCAGGCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSSQPLH*FQAWEQ
Trigger: CTGCTCCCATGCCTGAAACCAGTGAAGGGGCTGGGA...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACCCTGGGTCTGTGGGCTaGTCGGGGTTCTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYPGSVG*SGFSSP
Trigger: GGGGGAGGAGAACCCCGACCAGCCCACAGACCCAGG...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGGCTGGTTCTCCCTTTTaGCCTTTCTCGCCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSAGSPF*PFSPRG
Trigger: ACCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGC...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGACCCGCGGGGCCTTCTaGGCCAGGCGGGCCCTCGAT +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTTRGAF*ARRALD
Trigger: ATCGAGGGCCCGCCTGGCCCAGAAGGCCCCGCGGGT...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCCAGGGTCCCCGACTTaGCCAGTGGGACCCATGGTT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVPGSPT*PVGPMV
Trigger: AACCATGGGTCCCACTGGCCAAGTCGGGGACCCTGG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCAGACCATGGGGCCTTTaGAGCCCGCATCGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSRPWGL*SPHRRH
Trigger: GTGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGTGGCCCTTCTCGCCTaGCAACCCAGCCAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIVALLA*QPSQAV
Trigger: GACGGCCTGGCTGGGTTGCCAGGCGAGAAGGGCCAC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAGTCTCCCGGAGGTCCTaGTGGGCCGGAAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTVSRRS*WAGRTR
Trigger: CCTGGTCCTTCCGGCCCACCAGGACCTCCGGGAGAC...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCGGGCCTGGAAGACCCTaGGCGCCTGGATTACCCTGC +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSGPGRP*APGLPC
Trigger: GCAGGGTAATCCAGGCGCCCAGGGTCTTCCAGGCCC...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGACCAGGAGGGCCAGCTaGGCCGTCACCTCCGGAGTT +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMTRRAS*AVTSGV
Trigger: AACTCCGGAGGTGACGGCCCAGCTGGCCCTCCTGGT...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACGGCCCGTTTCTCCCGTaGGACCCTGAGGGCCGACCA +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYGPFLP*DPEGRP
Trigger: TGGTCGGCCCTCAGGGTCCCACGGGAGAAACGGGCC...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTGGACCTCTCTCCCCTaGAGATCCCGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDWTSLP*RSRRAW
Trigger: CCAGGCCCTGCGGGATCTCCAGGGGAGAGAGGTCCA...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGCTCGCCTGGAGGTCCTaGCAAACCCTGCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMLAWRS*QTLQPH
Trigger: GTGGGGCTGCAGGGTTTGCCAGGACCTCCAGGCGAG...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTGGGCCATCAGCACCTaGAGCTCCGGAGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDWAIST*SSGGSS
Trigger: CGAGGACCCTCCGGAGCTCCAGGTGCTGATGGCCCA...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCTGTTCTCTCCGGGCTaGGGTCCCACACCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDLFSPG*GPTPRG
Trigger: ACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGCTGCAGAATGACATTTaGCCTCTAAATGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEALQNDI*PLNGSC
Trigger: ACACGATCCATTTAGAGGCCAAATGTCATTCTGCAG...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATTTATTGCACGTTCTTaGCCAGGGCGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKFIARS*PGRGWG
Trigger: TCCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCTATTGCAATATACTGTaGCTAGAGTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLYCNIL*LEWSGE
Trigger: CTCCCCAGACCACTCTAGCCACAGTATATTGCAATA...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGGCGCTCCGCTCGAGTaGGGTCCTGCGCCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGGAPLE*GPAPAA
Trigger: CGCGGCTGGCGCAGGACCTCACTCGAGCGGAGCGCC...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGGAGGTCATCATACGGTaGGGGCGTGTAGTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSEVIIR*GRVVVL
Trigger: GAGGACTACTACACGCCCTCACCGTATGATGACCTC...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCCCCCTCGCCATAGGTaGGGTCATCATACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVPPRHR*GHHTVR
Trigger: CCTCACCGTATGATGACCTCACCTATGGCGAGGGGG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCTGGGACTCCTGGGCTaGGACCATGGGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDLGLLG*DHGAFG
Trigger: TCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTGTCCGATGGGGCCTTaGGGACCTGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMCPMGP*GPVGPG
Trigger: TCCTGGGCCTACAGGTCCTCAAGGCCCCATCGGACA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGAGAGCTGCAGGTCCTTaGAGGTGCGGGCGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMRAAGP*RCGRGS
Trigger: AGAACCCCGCCCGCACCTGCAAGGACCTGCAGCTCT...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGTGGGTGCGCTGAGCTaGGCGTCTTTGGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAVGALS*ASLVTL
Trigger: CAGAGTCACCAAAGACGCGCAGCTCAGCGCACCCAC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACGACGCAGGGTACAGCTaGTTGGTGGGTGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDDAGYS*LVGALS
Trigger: GCTCAGCGCACCCACCAAGCAGCTGTACCCTGCGTC...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGGAAGTCCTCGGGAAATaGAGACGCAGGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSEVLGK*RRRVQL
Trigger: CAGCTGTACCCTGCGTCTGCATTTCCCGAGGACTTC...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGCCAGGAAGGCCTGGCTaGCTTTCTTGGCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSPGRPG*LSWLSQ
Trigger: CTGTGAAAGCCAAGAAAGGCAGCCAGGCCTTCCTGG...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCCTTCCACGGGCTTCTTaGTGGGGGTGGGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRLPRAS*WGWAPS
Trigger: GGAAGGAGCCCACCCCCAGCAAGAAGCCCGTGGAAG...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCAGTGCCAACCTGGCCTaGTGGAGAATGGCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVSANLA*WRMACA
Trigger: GGCGCAAGCCATTCTCCAGCAGGCCAGGTTGGCACT...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCTTCCAGGGGTCCCCCTaGCGCCCTTCTCTCCATTGG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRFQGSP*RPSLHW
Trigger: CCAATGGAGAGAAGGGCGGCAGGGGGACCCCTGGAA...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGCAGGGGGCCCTTCATTaGCTTTCAGTCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSQGALH*LSVQEL
Trigger: GAGCTCTTGGACTGAAAGGCAATGAAGGGCCCCCTG...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCCCGGGGGATCCCGTCTaGCCGGGTTCACCATCATCT +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRPGDPV*PGSPSS
Trigger: AGATGATGGTGAACCCGGGCAGACGGGATCCCCCGG...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGGAACCAAATATAATCTaGTATGGTCACACCACAGAC +
Preference number: 4 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAEPNII*YGHTTD
Trigger: GTCTGTGGTGTGACCATAGCAGATTATATTTGGTTC...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATCCCCTCGGGTCCTCCTaGCCACAGACGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNPLGSS*PQTAAP
Trigger: GGGGGCTGCCGTCTGTGGGCAGGAGGACCCGAGGGG...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAATCGCCTTTCCTGGCTaGCCCTCGGGTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTIAFPG*PSGPPA
Trigger: GGCAGGAGGACCCGAGGGGCAGCCAGGAAAGGCGAT...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACCGTCGTCCAGCAGCTaGCTGGCGTCGATGTTCCGC +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTPSSSS*LASMFR
Trigger: GCGGAACATCGACGCCAGCCAGCTGCTGGACGACGG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACATGTCGTAGCTGCCCGTaGCTGCGTCCTGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTCRSCP*LRPARP
Trigger: TGGCCTGGCAGGACGCAGCCACGGGCAGCTACGACA...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGTGGCGGCGGCTGTTCTaGAAGGGGCGGCTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRWRRLF*KGRLAR
Trigger: GCGCGCCAGCCGCCCCTTCCAGAACAGCCGCCGCCA...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACGCTTTCCAGCGGGTATaGACGTCCATGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYAFQRV*TSMPAG
Trigger: CCCCGCCGGCATGGACGTCCATACCCGCTGGAAAGC...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCCTTCAGGAGATCTGCTaGCTGAGCTGCGCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRLQEIC*LSCAAR
Trigger: CCGAGCCGCGCAGCTCAGCCAGCAGATCTCCTGAAG...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATGGAAGATCGCCGCGTaGCGCAAAAGCCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKWKIAA*RKSLLS
Trigger: AGACAACAGGCTTTTGCGCCACGCGGCGATCTTCCA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCTGCGGTCGAGGAATTTaGTGGTCTTCTTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGCGRGI*WSSFYS
Trigger: ACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCA...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGCCTCGGGGACCTCTGTaGTTTCTTTGGCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSPRGPL*FLWQLP
Trigger: TGGAAGCTGCCAAAGAAACCACAGAGGTCCCCGAGG...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCACTGGTTTCAGGCATaGGAGCAGCTTCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVHWFQA*EQLPWG
Trigger: CCCCCACGGAAGCTGCTCCCATGCCTGAAACCAGTG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGGGACCCATGGTTCCTaGAGGTCCGGGAAGACCCGC +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIGTHGS*RSGKTR
Trigger: GCGGGTCTTCCCGGACCTCCAGGAACCATGGGTCCC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCCCCCGACTTGGCCAGTaGGACCCATGGTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSPRLGQ*DPWFLE
Trigger: CTCCAGGAACCATGGGTCCCACTGGCCAAGTCGGGG...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCCTGGGCTGAGACCATaGGGCCTTTGGAGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDPGLRP*GLWSPH
Trigger: ATGCGGGCTCCAAAGGCCCCATGGTCTCAGCCCAGG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACACCCATCGGGCCAGCTaGTCCCCTCAGTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDTHRAS*SPQCQP
Trigger: AGGTTGGCACTGAGGGGACCAGCTGGCCCGATGGGT...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCATTACCCTGCTGTCCTaGGGGGCCAGGCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRITLLS*GARLSL
Trigger: CAGGGAGAGCCTGGCCCCCCAGGACAGCAGGGTAAT...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTATGCACCCTGGGGGCCTaGAAGACCCTGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLCTLGA*KTLGAW
Trigger: CCAGGCGCCCAGGGTCTTCCAGGCCCCCAGGGTGCA...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGGACCAATTGCACCCTaGGGGCCTGGAAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMGPIAP*GPGRPW
Trigger: CCAGGGTCTTCCAGGCCCCCAGGGTGCAATTGGTCC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACGGACCAATTGCACCCTaGGGGCCTGGAAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDGPIAP*GPGRPW
Trigger: CCAGGGTCTTCCAGGCCCCCAGGGTGCAATTGGTCC...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCGACTCCTCGAGGACCTaGGTAGCCAATCGGACCCTG +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVDSSRT*VANRTL
Trigger: CAGGGTCCGATTGGCTACCCAGGTCCTCGAGGAGTC...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACGCCACGCTCACCCATTaGGCCCGTTTCTCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYATLTH*ARFSRG
Trigger: CCCACGGGAGAAACGGGCCCAATGGGTGAGCGTGGC...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGCCAGGGGGCCCAGGGTaGCCACGCTCACCCATTGGG +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTPGGPG*PRSPIG
Trigger: CCCAATGGGTGAGCGTGGCCACCCTGGGCCCCCTGG...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACCCAGCGGCTCCAGCTaGACCTCTCTCCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTPSGSS*TSLPWR
Trigger: TCTCCAGGGGAGAGAGGTCCAGCTGGAGCCGCTGGG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGGCCAGCTGGGCCTTGTaGGCCTTTCTCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWASWAL*AFLARS
Trigger: GCTCCTGGCGAGAAAGGCCCACAAGGCCCAGCTGGC...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGACCGTCTCGGCCAGCTaGGCCTTGTGGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMTVSAS*ALWAFL
Trigger: GAGAAAGGCCCACAAGGCCCAGCTGGCCGAGACGGT...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCCTCGCCTGGAGGTCCTaGCAAACCCTGCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEILAWRS*QTLQPH
Trigger: GTGGGGCTGCAGGGTTTGCCAGGACCTCCAGGCGAG...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCTGGGGGACCTTGTaGGCCATCAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSTWGTL*AISTWS
Trigger: GCTCCAGGTGCTGATGGCCCACAAGGTCCCCCAGGT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGGCCAGGGCTGCCTTTaGGACCATCATCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMGQGCL*DHHLRE
Trigger: CTCCCGGAGATGATGGTCCCAAAGGCAGCCCTGGCC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGGCCAGGGCTGCCTTTaGGACCATCATCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRGQGCL*DHHLRE
Trigger: CTCCCGGAGATGATGGTCCCAAAGGCAGCCCTGGCC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGCCCTTAGCACCTTTTaGACCAGGCGGACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMALSTF*TRRTRQ
Trigger: CTGCCGGGTCCGCCTGGTCCAAAAGGTGCTAAGGGC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGCGCGTCCTGGATGCCTaGATTGGCAGGGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMRVLDA*IGRGWM
Trigger: CATCCAGCCCCTGCCAATCCAGGCATCCAGGACGCG...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCCTGTTCTCTCCGGGCTaGGGTCCCACACCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEILFSPG*GPTPRG
Trigger: ACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAG...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATGCTGCAGGCAGCCCTaGAGAGACTCATGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKCCRQP*RDSWSS
Trigger: TGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACGCATTCTGGTGGTGGTaGGGGTCGGGGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDAFWWW*GSGTAP
Trigger: TGGTGCTGTCCCCGACCCCCACCACCACCAGAATGC...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGCTGGAACTGCATTCTaGTGGTGGTGGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRAGTAF*WWWGSG
Trigger: CCCCGACCCCCACCACCACCAGAATGCAGTTCCAGC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAGGCGCTCCGCTCGAGTaGGGTCCTGCGCCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIGAPLE*GPAPAA
Trigger: CGCGGCTGGCGCAGGACCTCACTCGAGCGGAGCGCC...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACACCGGAAGGGCAGCATaGGCATGGTTCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDTGRAA*AWFLED
Trigger: GTCCTCCAGGAACCATGCTCATGCTGCCCTTCCGGT...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGACCAGAATCTCCTTTaGGGCCGGGAAGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRDQNLL*GREVLG
Trigger: CCCCAGGACTTCCCGGCCTCAAAGGAGATTCTGGTC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAACTGGGTTTCCGTGCATaGTTGAAAGCCAGGCACACT +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKLGFRA*LKARHT
Trigger: AGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAG...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACCGGGGTTCTGCTGCGTaGCCAGGGGCCGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYRGSAA*PGAVSS
Trigger: AGATGAAACGGCCCCTGGGCACGCAGCAGAACCCCG...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACCACACCCACAGGGTTaGCCTCGGCGTCCACATAGG +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTPHPQG*PRRPHR
Trigger: CCTATGTGGACGCCGAGGGCAACCCTGTGGGTGTGG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCGTGGGTGCGCTGAGCTaGGCGTCTTTGGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSVGALS*ASLVTL
Trigger: CAGAGTCACCAAAGACGCGCAGCTCAGCGCACCCAC...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCCAGCTGCTTGGTGGGTaGGCTGAGCTGCGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSQLLGG*AELRVF
Trigger: AAAGACGCGCAGCTCAGCGCACCCACCAAGCAGCTG...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACTTCCACGGGCTTCTTaGTGGGGGTGGGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTLPRAS*WGWAPS
Trigger: GGAAGGAGCCCACCCCCAGCAAGAAGCCCGTGGAAG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCAGTGCCAACCTGGCCTaGTGGAGAATGGCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRSANLA*WRMACA
Trigger: GGCGCAAGCCATTCTCCAGCAGGCCAGGTTGGCACT...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTCCTTCTCGCCCTTTGTaGCCTTCAGACCACGGATGC +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAPSRPL*PSDHGC
Trigger: GCATCCGTGGTCTGAAGGGCACAAAGGGCGAGAAGG...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCCAGGGTCAGGACGTaGACGGGACACTCACGAACG +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDSRVRT*TGHSRT
Trigger: CGTTCGTGAGTGTCCCGTGCACGTCCTGACCCTGGA...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGGCCAGGGTCCCCAGTaGGCCTTCAAGGAGACCTTA +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRGQGPQ*AFKETL
Trigger: TAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGAAAGGAAAGTGACGTaGATTGATCTTAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLERKVT*IDLRVL
Trigger: AAGGACTCTAAGATCAATGCACGTCACTTTCCTTTC...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGCGCAGGAGGGAGTGTaGTTGGCTATCCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRAQEGV*LAILPS
Trigger: ACTGGGCAGGATAGCCAAGCACACTCCCTCCTGCGC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATACTTGGAAAAGACGTaGTGCAGGCAGCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKYLEKT*CRQPWR
Trigger: TCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATTCCTAAGCTGGAACTaGATTCTGGTGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKFLSWN*ILVVVG
Trigger: CCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTACGTCCAGCAGCTGGCTaGCGTCGATGTTCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLRPAAG*RRCSAA
Trigger: CGCGGCGGAACATCGACGCCAGCCAGCTGCTGGACG...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGGGGTCCTGCGACTGTaGGGTGTCAGGTACTGCGGT +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIGVLRL*GVRYCG
Trigger: ACCGCAGTACCTGACACCCCACAGTCGCAGGACCCC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGCTGGATTGGAGGAGTTaGAGGTGTCGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMLDWRS*RCRRCW
Trigger: CCAGCACCGCCGACACCTCCAACTCCTCCAATCCAG...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCCCTCAGTGCCAACCTaGCCTGCTGGAGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVPSVPT*PAGEWL
Trigger: AAGCCATTCTCCAGCAGGCCAGGTTGGCACTGAGGG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGTGGCCCTTCTCGCCTaGCAACCCAGCCAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLVALLA*QPSQAV
Trigger: GACGGCCTGGCTGGGTTGCCAGGCGAGAAGGGCCAC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACGTCCTTGGGGTCCATTaGGTCCCCGTTCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDVLGVH*VPVHQE
Trigger: CTCCTGGTGAACGGGGACCCAATGGACCCCAAGGAC...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTCCAAGAGCTCCCACTaGACCAGGAAGCCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMSKSSH*TRKPSV
Trigger: GACCGAGGGCTTCCTGGTCCAGTGGGAGCTCTTGGA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTCCTGGAGGCCCCGATaGACCTGGTTCACCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMSWRPR*TWFTSR
Trigger: CCTACTGGTGAACCAGGTCCATCGGGGCCTCCAGGA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCAGCCGGCTTCTCCCTTaGCCCCTTTCTCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSSRLLP*PLSLPV
Trigger: GACAGGGAGAGAAAGGGGCCAAGGGAGAAGCCGGCT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGGGACCGTCCGGGCCTaGGGATCCTGGGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLGTVRA*GSWETL
Trigger: CAAGGTCTCCCAGGATCCCCAGGCCCGGACGGTCCC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCACCCTTCGGGCCAGTTaGACCCGAGGAGCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEITLRAS*TRGALS
Trigger: GCTAAGGGCTCCTCGGGTCCAACTGGCCCGAAGGGT...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGCCTGGATGCCTGGATTaGCAGGGGCTGGATGACCTC +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMPGCLD*QGLDDL
Trigger: GAGGTCATCCAGCCCCTGCCAATCCAGGCATCCAGG...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACGCGTCCTGGATGCCTaGATTGGCAGGGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTRVLDA*IGRGWM
Trigger: CATCCAGCCCCTGCCAATCCAGGCATCCAGGACGCG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCTGTTCCGCCGCGTCCTaGATGCCTGGATTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEICSAAS*MPGLAG
Trigger: CCCTGCCAATCCAGGCATCCAGGACGCGGCGGAACA...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACACTCACGAACGAATaGCATGCTGAGGTCACGAGG +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKTLTNE*HAEVTR
Trigger: CCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGT...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAAACAGCCCTCGGGAGTaGACGCACCGGGGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLNSPRE*THRGGR
Trigger: TCTCCCGCCCCGGTGCGTCCACTCCCGAGGGCTGTT...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACAGAGATCGCCTTTCCTaGCTGCCCCTCGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYRDRLS*LPLGSS
Trigger: GGAGGACCCGAGGGGCAGCCAGGAAAGGCGATCTCT...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAGTGGCTAGAGTGGTCTaGGGAGAACGGGACACATTT +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKVARVV*GERDTF
Trigger: AAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCAC...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGGTAGCAGTGGTAGGTaGCGTTCTGGTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIGSSGR*RSGGQR
Trigger: CCTCTGCCCACCAGAACGTCACCTACCACTGCTACC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGGTCCTGCCAGGCCACTaGCTGGTAGCAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWVLPGH*LVAVVG
Trigger: ACCTACCACTGCTACCAGTCAGTGGCCTGGCAGGAC...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGCTGCGCGTCTTTGGTaGCTCTGTAAGCGACATCCG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMAARLW*LCKRHP
Trigger: CGGATGTCGCTTACAGAGTCACCAAAGACGCGCAGC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACATGCCATCTGACAGGTTaGTGCCCCGGAAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTCHLTG*CPGRGG
Trigger: ACCCCCTCTTCCGGGGCATCAACCTGTCAGATGGCA...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCTGCCATCTGACAGGTTaGTGCCCCGGAAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEICHLTG*CPGRGG
Trigger: ACCCCCTCTTCCGGGGCATCAACCTGTCAGATGGCA...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGACCGGAAGGGCAGCATaGGCATGGTTCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWTGRAA*AWFLED
Trigger: GTCCTCCAGGAACCATGCTCATGCTGCCCTTCCGGT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGACCAGAATCTCCTTTaGGGCCGGGAAGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIDQNLL*GREVLG
Trigger: CCCCAGGACTTCCCGGCCTCAAAGGAGATTCTGGTC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTCCGATCAGGCCTGGATaGCCCTTTTCACCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAPIRPG*PFSPLG
Trigger: TCCCAAAGGTGAAAAGGGTCATCCAGGCCTGATCGG...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCCCCTCCCCCAACCCCTaGGACCTATTCACGAACAGG +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIPSPNP*DLFTNR
Trigger: CCTGTTCGTGAATAGGTCTCAGGGGTTGGGGGAGGG...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGTTGGTGATGGTGGGATaGCCTTTACGAGGCTTACCT +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSLVMVG*PLRGLP
Trigger: AGGTAAGCCTCGTAAAGGTCATCCCACCATCACCAA...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCTTCTGTCCGTGGGACTaGGACTGGGTTTCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVFCPWD*DWVSVH
Trigger: ATGCACGGAAACCCAGTCTCAGTCCCACGGACAGAA...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGGGCAACTTTTCACAGTaGAGAGATCGCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSGNFSQ*RDRLSW
Trigger: CCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCC...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCAACCTTCAGGAGATCTaGTGGCTGAGCTGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSNLQEI*WLSCAA
Trigger: AGCCGCGCAGCTCAGCCAGCAGATCTCCTGAAGGTT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTCATGGGGTGGTCGCTaGGGTCGAGGAATTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMSWGGR*GRGIWW
Trigger: CCACCAAATTCCTCGACCGCAGCGACCACCCCATGA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGTGCTGGAGAATGGCTTaGGCCTGGGACTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWCWRMA*AWDSWA
Trigger: AGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCA...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGCCTTCTCGCCCTTTGTaGCCTTCAGACCACGGATGC +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMPSRPL*PSDHGC
Trigger: GCATCCGTGGTCTGAAGGGCACAAAGGGCGAGAAGG...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCCTGGAGGGCCGGTCTTaGCTTGGAAACCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEILEGRS*LGNQSR
Trigger: GCGAGACTGGTTTCCAAGGCAAGACCGGCCCTCCAG...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATAGCCCCTTTCTCTCCTaGCGGCCCTGGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNSPFLS*RPWGSL
Trigger: CAGGGACCCCCAGGGCCGGCAGGAGAGAAAGGGGCT...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCCCCTTGCTTCCTTTCTaGCCCGGCTCCCCGATCTCT +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIPLLPF*PGSPIS
Trigger: AGAGATCGGGGAGCCGGGGCAGAAAGGAAGCAAGGG...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCCTCCTTTGTCCCCCTTaGTTCCTTTCTGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRLLCPP*FLSAPA
Trigger: AGCCGGGGCAGAAAGGAAGCAAGGGGGACAAAGGAG...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGTCCCACACCCCGTGGTaGCGAGGCGTAGATGAAGTC +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWSHTPW*RGVDEV
Trigger: GACTTCATCTACGCCTCGGCACCACGGGGTGTGGGA...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCGCAACCCAGAATCCATaGCTCGCCCATTCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVATQNP*LAHSVR
Trigger: ACGGACAGAATGGGCGAGGCATGGATTCTGGGTTGC...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACGCGCAGGAGGGAGTGTaGTTGGCTATCCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYAQEGV*LAILPS
Trigger: ACTGGGCAGGATAGCCAAGCACACTCCCTCCTGCGC...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGAGGCGGAGCTGGATTaGAGGAGTTGGAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIEAELD*RSWRCR
Trigger: CCGACACCTCCAACTCCTCCAATCCAGCTCCGCCTC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAGAGGCGGAGCTGGATTaGAGGAGTTGGAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTEAELD*RSWRCR
Trigger: CCGACACCTCCAACTCCTCCAATCCAGCTCCGCCTC...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGCCCTGGAGGCGGAGCTaGATTGGAGGAGTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWPWRRS*IGGVGG
Trigger: ACCTCCAACTCCTCCAATCCAGCTCCGCCTCCAGGG...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAACCCGCGGGGCCTTCTaGGCCAGGCGGGCCCTCGAT +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFITRGAF*ARRALD
Trigger: ATCGAGGGCCCGCCTGGCCCAGAAGGCCCCGCGGGT...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGTCCCGGAGGTCCTGGTaGGCCGGAAGGACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRSRRSW*AGRTRV
Trigger: GACCCTGGTCCTTCCGGCCCACCAGGACCTCCGGGA...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCCACATTTCCTTTTaGCCCCGGCTGGCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSTHISF*PRLAVH
Trigger: ATGGACGGCCAGCCGGGGCCAAAAGGAAATGTGGGT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACAGCACCGGGCATTCCTaGAAGGCCTGGTTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDSTGHS*KAWFPQ
Trigger: TTGGGGAAACCAGGCCTTCCAGGAATGCCCGGTGCT...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGGGCCATCTTCTCCCCTaGGACCGGGTGGGCCGATCT +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTGHLLP*DRVGRS
Trigger: AGATCGGCCCACCCGGTCCCAGGGGAGAAGATGGCC...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAGGGCCGGTCTTGCCTTaGAAACCAGTCTCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTGPVLP*KPVSPL
Trigger: GAGAGGCGAGACTGGTTTCCAAGGCAAGACCGGCCC...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACATCCAAGAGCTCCCACTaGACCAGGAAGCCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTSKSSH*TRKPSV
Trigger: GACCGAGGGCTTCCTGGTCCAGTGGGAGCTCTTGGA...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGCCCAGCGGCTCCAGCTaGACCTCTCTCCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTPSGSS*TSLPWR
Trigger: TCTCCAGGGGAGAGAGGTCCAGCTGGAGCCGCTGGG...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAGGCCCTGGGGGTCCCTaGGGCCCAGGTCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIGPGGP*GPGLPG
Trigger: TCCAGGGAGACCTGGGCCCCAGGGACCCCCAGGGCC...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACAGCCGGCTTCTCCCTTaGCCCCTTTCTCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYSRLLP*PLSLPV
Trigger: GACAGGGAGAGAAAGGGGCCAAGGGAGAAGCCGGCT...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCGCACCTGCTCCACTTTaGGGGTGTCGATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVAPAPL*GCRSPE
Trigger: TTCTGGAGATCGACACCCCCAAAGTGGAGCAGGTGC...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTATGGGTCGGGCGAGCTaGGGGGCTGGAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGMGRAS*GAGGMA
Trigger: GGCCATGCCTCCAGCCCCCCAGCTCGCCCGACCCAT...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CAA 72 bp TGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATaGTACATTACTCCATCTACCGAGGCAGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: CCRQPWRDSWSS*YITPSTEAAHG
Trigger: GCCATGCGCTGCCTCGGTAGATGGAGTAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGAGTTGCAGTAAACCTTaGAGGAATCCCTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSSCSKP*RNPWSI
Trigger: GATGCTCCAGGGATTCCTTCAAGGTTTACTGCAACT...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATTTTCTTGTGGACGCTaGGAGCAATTCTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKFSCGR*EQFCAT
Trigger: AGTGGCACAGAATTGCTCTCAGCGTCCACAAGAAAA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTACTGGGACTCCTGGGCTaGGACCATGGGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLLGLLG*DHGAFG
Trigger: TCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAG...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGGGGCCAGGTGGACCCTaGCCTCCTTTCTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTGPGGP*PPFSPG
Trigger: TCCAGGAGAGAAAGGAGGTCAGGGTCCACCTGGCCC...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGGCCAGGCTTCCCAGTaGTGCCCCGGGGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGGQASQ*CPGGLF
Trigger: AAAGAGGCCCCCGGGGCATCACTGGGAAGCCTGGCC...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCCGATCAGGCCTGGATaGCCCTTTTCACCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDPIRPG*PFSPLG
Trigger: TCCCAAAGGTGAAAAGGGTCATCCAGGCCTGATCGG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGCGCATCCAGGACATTTaGGATGGGAATCCAAATAGG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSRIQDI*DGNPNR
Trigger: CCTATTTGGATTCCCATCTCAAATGTCCTGGATGCG...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGCCACACCCACAGGGTTaGCCTCGGCGTCCACATAGG +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTPHPQG*PRRPHR
Trigger: CCTATGTGGACGCCGAGGGCAACCCTGTGGGTGTGG...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTCCGGGCGGAGCGCGCTaGGCGCTTTCCAGCGGGTAT +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFPGGAR*ALSSGY
Trigger: ATACCCGCTGGAAAGCGCGCAGCGCGCTCCGCCCGG...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACTCTGGATTGGGGTCCTaGGACTGTGGGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYSGLGS*DCGVSG
Trigger: ACCTGACACCCCACAGTCGCAGGACCCCAATCCAGA...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCTGGAGGGCCTTCTTTaGCAGGGTGTCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRLEGLL*QGVPGV
Trigger: GACCCCCGGGACACCCTGGCAAAGAAGGCCCTCCAG...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGTTTCCCAGGGAGGCCTaGAGGGCCTGGGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTFPREA*RAWVTL
Trigger: AAGGGTGACCCAGGCCCTGCAGGCCTCCCTGGGAAA...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTATTTCCCAGGGAGGCCTaGAGGGCCTGGGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLFPREA*RAWVTL
Trigger: AAGGGTGACCCAGGCCCTGCAGGCCTCCCTGGGAAA...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACTCCTTTGTCCCCCTTaGTTCCTTTCTGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTLLCPP*FLSAPA
Trigger: AGCCGGGGCAGAAAGGAAGCAAGGGGGACAAAGGAG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCCGCCGCGTCCTGGATaGCTGGATTGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGPPRPG*LDWQGL
Trigger: CAGCCCCTGCCAATCCAGGCATCCAGGACGCGGCGG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGCCCAAGGGCCCAGCCTaGATTTCCCATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWPKGPA*ISHGRR
Trigger: CCTTCTACCATGGGAAATGCAGGCTGGGCCCTTGGG...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCACAGTCATTGGCACATaGTGGCATCCTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRTVIGT*WHPGLQ
Trigger: CTGGAGCCCAGGATGCCAGCATGTGCCAATGACTGT...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCTGGAAGATCGCCGCGTaGCGCAAAAGCCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSWKIAA*RKSLLS
Trigger: AGACAACAGGCTTTTGCGCCACGCGGCGATCTTCCA...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGGGGGTCCTGCGACTGTaGGGTGTCAGGTACTGCGGT +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTGVLRL*GVRYCG
Trigger: ACCGCAGTACCTGACACCCCACAGTCGCAGGACCCC...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCCTCTGTGGTTTCTTTaGCAGCTTCCACGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVPLWFL*QLPRAS
Trigger: AGAAGCCCGTGGAAGCTGCCAAAGAAACCACAGAGG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACATCCCAGCCCCTTCACTaGTTTCAGGCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTSQPLH*FQAWEQ
Trigger: CTGCTCCCATGCCTGAAACCAGTGAAGGGGCTGGGA...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGTGTCGGCGGTGCTGGTaGGAATTTCGGCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRCRRCW*EFRPQR
Trigger: GCGCTGGGGCCGAAATTCCCACCAGCACCGCCGACA...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGAGGTGTCGGCGGTGCTaGTGGGAATTTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTRCRRC*WEFRPQ
Trigger: CTGGGGCCGAAATTCCCACCAGCACCGCCGACACCT...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGAGACCATGGGGCCTTTaGAGCCCGCATCGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVRPWGL*SPHRRH
Trigger: GTGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCT...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGCCAACCTGGCCTGCTaGAGAATGGCTTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLANLAC*RMACAW
Trigger: CCAGGCGCAAGCCATTCTCCAGCAGGCCAGGTTGGC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCAGCACCGGGCATTCCTaGAAGGCCTGGTTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEISTGHS*KAWFPQ
Trigger: TTGGGGAAACCAGGCCTTCCAGGAATGCCCGGTGCT...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGTGGGCCATCAGCACCTaGAGCTCCGGAGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVWAIST*SSGGSS
Trigger: CGAGGACCCTCCGGAGCTCCAGGTGCTGATGGCCCA...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGAGGCCCCGATGGACCTaGTTCACCAGTAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRRPRWT*FTSRAG
Trigger: CCCGGCCCTACTGGTGAACCAGGTCCATCGGGGCCT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGGCGGGCCCAGGCGCTaGGGTGCAGCTAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGGGPRR*GAARSC
Trigger: ACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCC...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGTTTATTGCACGTTCTTaGCCAGGGCGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWFIARS*PGRGWG
Trigger: TCCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAA...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGTGGTTTCCCTGCCCTaGACATTCTCCCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMVVSLP*TFSHQA
Trigger: AGCCTGATGGGAGAATGTCCAGGGCAGGGAAACCAC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGTGGTTTCCCTGCCCTaGACATTCTCCCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRVVSLP*TFSHQA
Trigger: AGCCTGATGGGAGAATGTCCAGGGCAGGGAAACCAC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTATACTGTGGCTAGAGTaGTCTGGGGAGAACGGGACA +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAILWLE*SGENGT
Trigger: TGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTAT...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CAA 72 bp ACGCTGGCGGTGTTTTGTTCCTCCTGGGTGGCTTGTTaGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLAVFCSSWVAC*WLPKLELHSGG
Trigger: ACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCACCCAGGAGGAACAAAACACCGCCAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGCCATCAGGCAAGTTGTaGAAATCTAGAACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSPSGKL*KSRTFR
Trigger: CCTGAAGGTTCTAGATTTTCACAACTTGCCTGATGG...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAGGCCAGGTCTCCCTGTaGGACCCATCGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIGQVSL*DPSGQL
Trigger: CAGCTGGCCCGATGGGTCTCACAGGGAGACCTGGCC...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCACCCGGAGGACCGATaGGCCCGATCAGGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGHPEDR*ARSGLD
Trigger: ATCCAGGCCTGATCGGGCTCATCGGTCCTCCGGGTG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAAGGCAGCGCATGGCATaGCTGAACGGCTTGGAACAA +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTRQRMA*LNGLEQ
Trigger: TTGTTCCAAGCCGTTCAGTCATGCCATGCGCTGCCT...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCCGAAGATCTCTTCCATaGCGTCCGCGTAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIRRSLP*RPRSPR
Trigger: ACGTGGACTACGCGGACGGCATGGAAGAGATCTTCG...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAGCAGGTCCTTGCAGGTaGGGGCGGGGTTCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIAGPCR*GRGSAA
Trigger: CGCAGCAGAACCCCGCCCGCACCTGCAAGGACCTGC...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGCCTTCATCACCTTTCTaGCCGAAAAGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWPSSPF*PKRPCW
Trigger: CCAGCAGGGCCTTTTCGGGCAGAAAGGTGATGAAGG...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGGCCCTTCTCTCCCACTaGACCAGGGTTTCCTATTCC +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWALLSH*TRVSYS
Trigger: GGAATAGGAAACCCTGGTGCAGTGGGAGAGAAGGGC...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAGCCCTTCTCTCCCACTaGACCAGGGTTTCCTATTCC +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTALLSH*TRVSYS
Trigger: GGAATAGGAAACCCTGGTGCAGTGGGAGAGAAGGGC...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATAAGGCCAGGCTCACCTaGTTCGCCAGGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNKARLT*FARLAL
Trigger: AAGGGCGAGCCTGGCGAAGCAGGTGAGCCTGGCCTT...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCCGGGGGATCCCGTCTaGCCGGGTTCACCATCATCT +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRPGDPV*PGSPSS
Trigger: AGATGATGGTGAACCCGGGCAGACGGGATCCCCCGG...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGCCGCCGCGTCCTGGATaGCTGGATTGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEPPRPG*LDWQGL
Trigger: CAGCCCCTGCCAATCCAGGCATCCAGGACGCGGCGG...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGCATCGGGAAGGCACCTaGAGAATGACATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMHREGT*RMTFGL
Trigger: GAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATG...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACATTGGAAAAGACGTGCTaGAGGCAGCCCTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTLEKTC*RQPWRD
Trigger: GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCAGAAGGAAAAGGCGCTaGACCCGGGCAACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSRRKRR*TRATFH
Trigger: GTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCTCCCTGGAGCATCCTTaGTTAGGATCGACCCAGTAT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVSLEHP*LGSTQY
Trigger: ATACTGGGTCGATCCTAACCAAGGATGCTCCAGGGA...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCTTCAGGAGATCTGCTaGCTGAGCTGCGCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRLQEIC*LSCAAR
Trigger: CCGAGCCGCGCAGCTCAGCCAGCAGATCTCCTGAAG...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTAATATTCATCTGGATTaGGGTCCTGCGACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLANIHLD*GPATVG
Trigger: CCCCACAGTCGCAGGACCCCAATCCAGATGAATATT...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGCCACGGGCTTCTTGCTaGGGGTGGGCTCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVPRASC*GWAPSL
Trigger: TAGGGAAGGAGCCCACCCCCAGCAAGAAGCCCGTGG...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTTGTAGTAGTCCTCACTaGGCACGTAGTCATAGTCCC +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLACSSPH*ARSHSP
Trigger: GGGACTATGACTACGTGCCCAGTGAGGACTACTACA...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAATCCGCACCTTCCCCTaGAGGCGGAGCTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLIRTFP*RRSWIG
Trigger: TCCAATCCAGCTCCGCCTCCAGGGGAAGGTGCGGAT...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAAACCCCGGTCACCCTTaGGGCCAGTTTGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLNPGHP*GQFVQA
Trigger: TGCCTGGACAAACTGGCCCCAAGGGTGACCGGGGTT...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGCCTTTTGGCCCCGGCTaGCCGTCCATACCCGTGACA +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVPFGPG*PSIPVT
Trigger: TGTCACGGGTATGGACGGCCAGCCGGGGCCAAAAGG...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACGGGACCCTTTTCTCCTaGAGGACCAATTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYGTLFS*RTNCTL
Trigger: CAGGGTGCAATTGGTCCTCCAGGAGAAAAGGGTCCC...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAGGGACCCTTTTCTCCTaGAGGACCAATTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTGTLFS*RTNCTL
Trigger: CAGGGTGCAATTGGTCCTCCAGGAGAAAAGGGTCCC...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACATTCCTGGAAGGCCTaGTTTCCCCAAGGGACCCTT +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTHSWKA*FPQGTL
Trigger: AAGGGTCCCTTGGGGAAACCAGGCCTTCCAGGAATG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACACCTCCTTTCTCTCCTaGAGGGCCTTCTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYTSFLS*RAFFAR
Trigger: CCTGGCAAAGAAGGCCCTCCAGGAGAGAAAGGAGGT...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGACTCCTCGAGGACCTaGGTAGCCAATCGGACCCTG +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLDSSRT*VANRTL
Trigger: CAGGGTCCGATTGGCTACCCAGGTCCTCGAGGAGTC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGGACCGGGGTCACCATTaGGACCTCCGCGACCCTTTG +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVDRGHH*DLRDPL
Trigger: CAAAGGGTCGCGGAGGTCCCAATGGTGACCCCGGTC...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATGACCGGGGTCACCATTaGGACCTCCGCGACCCTTTG +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNDRGHH*DLRDPL
Trigger: CAAAGGGTCGCGGAGGTCCCAATGGTGACCCCGGTC...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAATCCAATAGAGCCCTTTaGTCCTTGTCTTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKSNRAL*SLSSWI
Trigger: TATCCAGGAAGACAAGGACCAAAGGGCTCTATTGGA...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTATCCAGGAAAACCCACTaGGCCAGGGCTGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLSRKTH*ARAAFG
Trigger: CCCAAAGGCAGCCCTGGCCCAGTGGGTTTTCCTGGA...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTATAGTGTCCAAATCTaGCAGTCCCTCCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDYSVQI*QSLPQP
Trigger: GGGTTGGGGGAGGGACTGCCAGATTTGGACACTATA...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGAGGGAGTGTGCTTaGCTATCCTGCCCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWRRECA*LSCPVE
Trigger: TTCCACTGGGCAGGATAGCCAAGCACACTCCCTCCT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCAGGAGGGAGTGTGCTTaGCTATCCTGCCCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIRRECA*LSCPVE
Trigger: TTCCACTGGGCAGGATAGCCAAGCACACTCCCTCCT...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCTGCTGCAGGCAGCCCTaGAGAGACTCATGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEICCRQP*RDSWSS
Trigger: TGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCA...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAACTGCATTCTGGTGGTaGTGGGGGTCGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLTAFWW*WGSGTA
Trigger: TGCTGTCCCCGACCCCCACCACCACCAGAATGCAGT...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCATACTGTGGCTAGAGTaGTCTGGGGAGAACGGGACA +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRILWLE*SGENGT
Trigger: TGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTAT...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGGGTAGCAGTGGTAGGTaGCGTTCTGGTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRGSSGR*RSGGQR
Trigger: CCTCTGCCCACCAGAACGTCACCTACCACTGCTACC...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTTGCCATCGGCCCCCTTaGCTCCTCGAGGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFCHRPP*LLEDLG
Trigger: ACCCAGGTCCTCGAGGAGTCAAGGGGGCCGATGGCA...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACACCCGGAGGACCGATaGGCCCGATCAGGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIHPEDR*ARSGLD
Trigger: ATCCAGGCCTGATCGGGCTCATCGGTCCTCCGGGTG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTTGGTGATGGTGGGATaGCCTTTACGAGGCTTACCT +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMLVMVG*PLRGLP
Trigger: AGGTAAGCCTCGTAAAGGTCATCCCACCATCACCAA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCGAAAACAGAATCACATaGCCTAGACGCAGTCCACGG +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSENRIT*PRRSPR
Trigger: CCGTGGACTGCGTCTAGGTCATGTGATTCTGTTTTC...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGACGCAGGGTACAGCTaGTTGGTGGGTGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGDAGYS*LVGALS
Trigger: GCTCAGCGCACCCACCAAGCAGCTGTACCCTGCGTC...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGCTGAGAGCAATTCTGTaGCACTTGCCATCTGACAGG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMLRAIL*HLPSDR
Trigger: CCTGTCAGATGGCAAGTGGCACAGAATTGCTCTCAG...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGAGACAAAGAGCAGCTaGTGGATGTCACCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRETKSS*WMSPSN
Trigger: GTTTGAGGGTGACATCCAGCAGCTGCTCTTTGTCTC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGCCCTTGCTTCCTTTCTaGCCCGGCTCCCCGATCTCT +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVPLLPF*PGSPIS
Trigger: AGAGATCGGGGAGCCGGGGCAGAAAGGAAGCAAGGG...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATTCCACGATGGGCACCTaGTCCACTTTGGGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNSTMGT*STLGVS
Trigger: CGACACCCCCAAAGTGGAGCAGGTGCCCATCGTGGA...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGAGACTGGGTTTCCGTaGATGATTGAAAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRETGFP*MIESQA
Trigger: TGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCTGTGCTTGGCTATCCTaGCCAGTGGAAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRCAWLS*PVERKV
Trigger: CACTTTCCTTTCCACTGGGCAGGATAGCCAAGCACA...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTGTGCTTGGCTATCCTaGCCAGTGGAAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMCAWLS*PVERKV
Trigger: CACTTTCCTTTCCACTGGGCAGGATAGCCAAGCACA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACCGTCGTCCAGCAGCTaGCTGGCGTCGATGTTCCGC +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIPSSSS*LASMFR
Trigger: GCGGAACATCGACGCCAGCCAGCTGCTGGACGACGG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAACTGACTATACCAGGTaGAAGGCTGCTCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTTDYTR*KAALWA
Trigger: GGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGT...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGTGGGAGCAGCTTCCGTaGGGGTCGGGGTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEWEQLP*GSGSAP
Trigger: AGGAGCTGACCCCGACCCCCACGGAAGCTGCTCCCA...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACAGCGCCTGGGTCTGTaGGCTGGTCGGGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIQRLGL*AGRGSP
Trigger: AGGAGAACCCCGACCAGCCCACAGACCCAGGCGCTG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCCAATCCCTTCATAGATaGTATCCTGGTTCGCCGGCA +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSQSLHR*YPGSPA
Trigger: TGCCGGCGAACCAGGATACCATCTATGAAGGGATTG...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCGGCTCGATAATCGCTaGTTCTCCCTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDRLDNR*FSLLAF
Trigger: AAAGGCCAAAAGGGAGAACCAGCGATTATCGAGCCG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCCTGGGCTGAGACCATaGGGCCTTTGGAGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGPGLRP*GLWSPH
Trigger: ATGCGGGCTCCAAAGGCCCCATGGTCTCAGCCCAGG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCCTTTTGGCCCCGGCTaGCCGTCCATACCCGTGACA +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGPFGPG*PSIPVT
Trigger: TGTCACGGGTATGGACGGCCAGCCGGGGCCAAAAGG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAAATCCTGTGGGTCCTTaGGGTCCATTGGGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLNPVGP*GPLGPR
Trigger: ACGGGGACCCAATGGACCCCAAGGACCCACAGGATT...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCCACGCTCACCCATTaGGCCCGTTTCTCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEATLTH*ARFSRG
Trigger: CCCACGGGAGAAACGGGCCCAATGGGTGAGCGTGGC...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAGAGGCCTGCAGGGCCTaGGTCACCCTTCGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIEACRA*VTLRPF
Trigger: GAAGGGACGAAGGGTGACCCAGGCCCTGCAGGCCTC...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAGGGCCCAGGTCTCCCTaGAATTCCGATGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIGPRSP*NSDGPS
Trigger: GCTGGGCCCATCGGAATTCCAGGGAGACCTGGGCCC...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTACCGTCTCGGCCAGCTaGGCCTTGTGGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGTVSAS*ALWAFL
Trigger: GAGAAAGGCCCACAAGGCCCAGCTGGCCGAGACGGT...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGAGGCCCCGATGGACCTaGTTCACCAGTAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTERPRWT*FTSRAG
Trigger: CCCGGCCCTACTGGTGAACCAGGTCCATCGGGGCCT...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACGAGCCCGATCAGGCCTaGATGACCCTTTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYEPDQA*MTLFTF
Trigger: AAAGGTGAAAAGGGTCATCCAGGCCTGATCGGGCTC...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACACACTCACGAACGAATaGCATGCTGAGGTCACGAGG +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYTLTNE*HAEVTR
Trigger: CCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGT...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGGGTCCCACACCCCGTaGTGCCGAGGCGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGGSHTP*CRGVDE
Trigger: TTCATCTACGCCTCGGCACCACGGGGTGTGGGACCC...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTGTGGCTTCCTAAGCTaGAACTGCATTCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDCGFLS*NCILVV
Trigger: CACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACA...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGTGTTTTGTTCCTCCTaGGTGGCTTGTTTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAVFCSS*VACLWL
Trigger: AAGCCACAAACAAGCCACCCAGGAGGAACAAAACAC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTTTGGAAAATCCACGCTaGCGGTGTTTTGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLALENPR*RCFVPP
Trigger: AGGAGGAACAAAACACCGCCAGCGTGGATTTTCCAA...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCTTTCCAGGGAAATTTaGAAAATCCACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVLSREI*KIHAGG
Trigger: ACCGCCAGCGTGGATTTTCCAAATTTCCCTGGAAAG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGAAGGTGACAGTCATTaGCACATGCTGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIEGDSH*HMLASW
Trigger: CCAGGATGCCAGCATGTGCCAATGACTGTCACCTTC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACAGTTGCAGTAAACCTTaGAGGAATCCCTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDSCSKP*RNPWSI
Trigger: GATGCTCCAGGGATTCCTTCAAGGTTTACTGCAACT...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTTTTCTTGTGGACGCTaGGAGCAATTCTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMFSCGR*EQFCAT
Trigger: AGTGGCACAGAATTGCTCTCAGCGTCCACAAGAAAA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGAGGTCATCATACGGTaGGGGCGTGTAGTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLEVIIR*GRVVVL
Trigger: GAGGACTACTACACGCCCTCACCGTATGATGACCTC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTGGGCCAGGTGGACCCTaGCCTCCTTTCTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFGPGGP*PPFSPG
Trigger: TCCAGGAGAGAAAGGAGGTCAGGGTCCACCTGGCCC...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAAACGGAGGCTTTGGTaGTGGTGGGATGACCTTTAC +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWKRRLW*WWDDLY
Trigger: GTAAAGGTCATCCCACCATCACCAAAGCCTCCGTTT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCAAGGCACCTGCAGAATaGCATTTGGCCTCTAAATGG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRKAPAE*HLASKW
Trigger: CCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTT...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCGAATCAAAAACTGTCTaGAAAGGGGCACTGGTACCT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVESKTV*KGALVP
Trigger: AGGTACCAGTGCCCCTTTTCAGACAGTTTTTGATTC...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACGGCAACTTTTCACAGTaGAGAGATCGCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYGNFSQ*RDRLSW
Trigger: CCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCC...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGAGAGCTGCAGGTCCTTaGAGGTGCGGGCGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTERAAGP*RCGRGS
Trigger: AGAACCCCGCCCGCACCTGCAAGGACCTGCAGCTCT...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATTCTGGATTGGGGTCCTaGGACTGTGGGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNSGLGS*DCGVSG
Trigger: ACCTGACACCCCACAGTCGCAGGACCCCAATCCAGA...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATATGGAGGTGTCGGCGGTaGTGGTGGGAATTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIWRCRR*WWEFRP
Trigger: GGGCCGAAATTCCCACCAGCACCGCCGACACCTCCA...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGTTCCAGGGGTCCCCCTaGCGCCCTTCTCTCCATTGG +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEFQGSP*RPSLHW
Trigger: CCAATGGAGAGAAGGGCGGCAGGGGGACCCCTGGAA...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCTGGAGGGCCGGTCTTaGCTTGGAAACCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGLEGRS*LGNQSR
Trigger: GCGAGACTGGTTTCCAAGGCAAGACCGGCCCTCCAG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTTCCCACACCCCGTGGTaGCGAGGCGTAGATGAAGTC +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGSHTPW*RGVDEV
Trigger: GACTTCATCTACGCCTCGGCACCACGGGGTGTGGGA...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCCTGCTCGTTGTAGATaGAGACCAGGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRPARCR*RPGRPG
Trigger: GCCAGGCCTTCCTGGTCTCCATCTACAACGAGCAGG...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGACAAAGAGCAGCTGCTaGATGTCACCCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWTKSSC*MSPSNT
Trigger: GGTGTTTGAGGGTGACATCCAGCAGCTGCTCTTTGT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCCGTGTAATATTCATCTaGATTGGGGTCCTGCGACTG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRRVIFI*IGVLRL
Trigger: CAGTCGCAGGACCCCAATCCAGATGAATATTACACG...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGGCTGGTTCTCCCTTTTaGCCTTTCTCGCCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRAGSPF*PFSPRG
Trigger: ACCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGC...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGCCAGGGTCCCCGACTTaGCCAGTGGGACCCATGGTT +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEPGSPT*PVGPMV
Trigger: AACCATGGGTCCCACTGGCCAAGTCGGGGACCCTGG...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTATTACCCTGCTGTCCTaGGGGGCCAGGCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFITLLS*GARLSL
Trigger: CAGGGAGAGCCTGGCCCCCCAGGACAGCAGGGTAAT...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATAATCCTGTGGGTCCTTaGGGTCCATTGGGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNNPVGP*GPLGPR
Trigger: ACGGGGACCCAATGGACCCCAAGGACCCACAGGATT...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGCACCTGCTCCACTTTaGGGGTGTCGATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLAPAPL*GCRSPE
Trigger: TTCTGGAGATCGACACCCCCAAAGTGGAGCAGGTGC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTACTGCATTCTGGTGGTaGTGGGGGTCGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGTAFWW*WGSGTA
Trigger: TGCTGTCCCCGACCCCCACCACCACCAGAATGCAGT...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCTTTGTTCCTCCTGGGTaGCTTGTTTGTGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSFVPPG*LVCGFL
Trigger: TAGGAAGCCACAAACAAGCCACCCAGGAGGAACAAA...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCTTTGTTCCTCCTGGGTaGCTTGTTTGTGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRFVPPG*LVCGFL
Trigger: TAGGAAGCCACAAACAAGCCACCCAGGAGGAACAAA...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
3UTR CAA 72 bp TCCAGGACATTTGAGATGGGAATCCAAATAGGCTACTaGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SRTFEMGIQIGY*EKTCCRQPWRD
Trigger: GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATCTTTGGGCCAAGAAGTaGTTCTGGCCCCTTCGGACT +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNLWAKK*FWPLRT
Trigger: AGTCCGAAGGGGCCAGAATCACTTCTTGGCCCAAAG...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371817.8
CDS-3UTR TCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGTTCTGTCCGTGGGACTaGGACTGGGTTTCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVFCPWD*DWVSVH
Trigger: ATGCACGGAAACCCAGTCTCAGTCCCACGGACAGAA...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATCGAAGATCTCTTCCATaGCGTCCGCGTAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNRRSLP*RPRSPR
Trigger: ACGTGGACTACGCGGACGGCATGGAAGAGATCTTCG...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTAACCTTCAGGAGATCTaGTGGCTGAGCTGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGNLQEI*WLSCAA
Trigger: AGCCGCGCAGCTCAGCCAGCAGATCTCCTGAAGGTT...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACAGCTGCTTGGTGGGTaGGCTGAGCTGCGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIQLLGG*AELRVF
Trigger: AAAGACGCGCAGCTCAGCGCACCCACCAAGCAGCTG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATAGCTCCAGCCCAATCTaGTGGATACCCTGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNSSSPI*WIPCSL
Trigger: CAACGAGCAGGGTATCCAGCAGATTGGGCTGGAGCT...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGAGTCATAGTCCCCGATaGCGACGTCCTCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRSHSPR*RRPLPS
Trigger: GGAAGGAAGAGGACGTCGGCATCGGGGACTATGACT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATATGCTGGAGAATGGCTTaGGCCTGGGACTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFICWRMA*AWDSWA
Trigger: AGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCA...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGAAACTTCCAATTTATTaGACGTTCTTGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMKLPIY*TFLARA
Trigger: CGCCCTGGCCAAGAACGTGCAATAAATTGGAAGTTT...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGCATAAATTCTTGCTaGCCCGGGGCAAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWSINSC*PGANFQ
Trigger: TTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGCCAGTATTCACCATCTaGGAAGTCGGGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVPVFTI*EVGVAE
Trigger: CTCTGCCACCCCGACTTCCCAGATGGTGAATACTGG...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCCCCGTTCTTCTTTGTaGCGGCGGCTGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGPRSSL*RRLFWK
Trigger: CTTCCAGAACAGCCGCCGCCACAAAGAAGAACGGGG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGTCACAGTTGTTAGGATaGAGAAGTCCTCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: PNRLLGKDVLQAALERLMSQLLG*RSPREM
Trigger: CATTTCCCGAGGACTTCTCCATCCTAACAACTGTGA...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACGTGTAATATTCATCTaGATTGGGGTCCTGCGACTG +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTRVIFI*IGVLRL
Trigger: CAGTCGCAGGACCCCAATCCAGATGAATATTACACG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGCCCTGGAGGCGGAGCTaGATTGGAGGAGTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEPWRRS*IGGVGG
Trigger: ACCTCCAACTCCTCCAATCCAGCTCCGCCTCCAGGG...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTATCCGCACCTTCCCCTaGAGGCGGAGCTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFIRTFP*RRSWIG
Trigger: TCCAATCCAGCTCCGCCTCCAGGGGAAGGTGCGGAT...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACATGAGCATGGTTCCTaGAGGACCGGGCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIHEHGS*RTGQAI
Trigger: GATGGCCTGCCCGGTCCTCCAGGAACCATGCTCATG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTCATGAGCATGGTTCCTaGAGGACCGGGCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFHEHGS*RTGQAI
Trigger: GATGGCCTGCCCGGTCCTCCAGGAACCATGCTCATG...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGAAGACCCTGGGCGCCTaGATTACCCTGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEKTLGA*ITLLSW
Trigger: CCAGGACAGCAGGGTAATCCAGGCGCCCAGGGTCTT...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCTCCAATAGAGCCCTTTaGTCCTTGTCTTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRSNRAL*SLSSWI
Trigger: TATCCAGGAAGACAAGGACCAAAGGGCTCTATTGGA...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGTCCTTGGGGTCCATTaGGTCCCCGTTCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEVLGVH*VPVHQE
Trigger: CTCCTGGTGAACGGGGACCCAATGGACCCCAAGGAC...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATATCCAGGAAAACCCACTaGGCCAGGGCTGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFISRKTH*ARAAFG
Trigger: CCCAAAGGCAGCCCTGGCCCAGTGGGTTTTCCTGGA...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCATTTGGCCTCTAAATaGATCGTGTTGGAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVHLASK*IVLEVV
Trigger: AACAACCTCCAACACGATCCATTTAGAGGCCAAATG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGTTGGAAAATCCACGCTaGCGGTGTTTTGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWLENPR*RCFVPP
Trigger: AGGAGGAACAAAACACCGCCAGCGTGGATTTTCCAA...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGCTTTCCAGGGAAATTTaGAAAATCCACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWLSREI*KIHAGG
Trigger: ACCGCCAGCGTGGATTTTCCAAATTTCCCTGGAAAG...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCTATTGCAATATACTGTaGCTAGAGTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRYCNIL*LEWSGE
Trigger: CTCCCCAGACCACTCTAGCCACAGTATATTGCAATA...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTGACCCCCGCTTGTACTaGCTATACCAGGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFDPRLY*LYQVEG
Trigger: GCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTC...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000618395.4
CDS-3UTR TCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAGTGCCACTTGCCATCTaGCAGGTTGATGCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIVPLAI*QVDAPE
Trigger: TTCCGGGGCATCAACCTGTCAGATGGCAAGTGGCAC...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGGGATCGTTTCCTCAGTaGACTCCCCCTCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVGSFPQ*TPPPSH
Trigger: ATGACTTGGAGGGGGAGTTCACTGAGGAAACGATCC...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGGGATCGTTTCCTCAGTaGACTCCCCCTCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRGSFPQ*TPPPSH
Trigger: ATGACTTGGAGGGGGAGTTCACTGAGGAAACGATCC...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCCAGTGGAAAGGAAAGTaGCGTGCATTGATCTTAGAG +
Preference number: 4 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIQWKGK*RALILE
Trigger: CTCTAAGATCAATGCACGTCACTTTCCTTTCCACTG...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGAAGTCCTCGGGAAATaGAGACGCAGGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGEVLGK*RRRVQL
Trigger: CAGCTGTACCCTGCGTCTGCATTTCCCGAGGACTTC...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTTCATGGGGTGGTCGCTaGGGTCGAGGAATTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFSWGGR*GRGIWW
Trigger: CCACCAAATTCCTCGACCGCAGCGACCACCCCATGA...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACAAACTTCCAATTTATTaGACGTTCTTGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYKLPIY*TFLARA
Trigger: CGCCCTGGCCAAGAACGTGCAATAAATTGGAAGTTT...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTCCCAAGGGCCCAGCCTaGATTTCCCATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFPKGPA*ISHGRR
Trigger: CCTTCTACCATGGGAAATGCAGGCTGGGCCCTTGGG...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTACAGTCATTGGCACATaGTGGCATCCTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGTVIGT*WHPGLQ
Trigger: CTGGAGCCCAGGATGCCAGCATGTGCCAATGACTGT...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACGTGACATTTTTCTTGTaGACGCTGAGAGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDVTFFL*TLRAIL
Trigger: CAGAATTGCTCTCAGCGTCCACAAGAAAAATGTCAC...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTATGTCGATCATGGGGTaGTCGCTGCGGTCGAGGAAT +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGMSIMG*SLRSRN
Trigger: ATTCCTCGACCGCAGCGACCACCCCATGATCGACAT...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGCCTCTGTGGTTTCTTTaGCAGCTTCCACGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVPLWFL*QLPRAS
Trigger: AGAAGCCCGTGGAAGCTGCCAAAGAAACCACAGAGG...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGCAATCCCTTCATAGATaGTATCCTGGTTCGCCGGCA +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTQSLHR*YPGSPA
Trigger: TGCCGGCGAACCAGGATACCATCTATGAAGGGATTG...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGGAGCCCGATCAGGCCTaGATGACCCTTTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVEPDQA*MTLFTF
Trigger: AAAGGTGAAAAGGGTCATCCAGGCCTGATCGGGCTC...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGTGTGGCTTCCTAAGCTaGAACTGCATTCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTCGFLS*NCILVV
Trigger: CACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACA...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATGTGGCTAGAGTGGTCTaGGGAGAACGGGACACATTT +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNVARVV*GERDTF
Trigger: AAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCAC...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATCCAGCTTCAGAGAGTTaGGAGAGCCGAAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNPASES*ESRRSL
Trigger: AAGAGATCTTCGGCTCTCTCAACTCTCTGAAGCTGG...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGAACGAATGGCATGCTaGGGTCACGAGGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEERMAC*GHEVAL
Trigger: GAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTC...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCCTATGGCTTTTCTTTTaGAGAGATGAAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSLWLFF*RDEGDS
Trigger: ACTGTCACCTTCATCTCTTCAAAAGAAAAGCCATAG...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGTATTTCAAAAGGCCTaGTGTCCTCGAAACTTTATC +
Preference number: 4 (lower is better)
Translates to: FKSSRHNPVLITALGSGRVFQKA*CPRNFI
Trigger: GATAAAGTTTCGAGGACATCAGGCCTTTTGAAATAC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAAGCTCCAGCCCAATCTaGTGGATACCCTGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFISSSPI*WIPCSL
Trigger: CAACGAGCAGGGTATCCAGCAGATTGGGCTGGAGCT...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATCTGAGAGCAATTCTGTaGCACTTGCCATCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNLRAIL*HLPSDR
Trigger: CCTGTCAGATGGCAAGTGGCACAGAATTGCTCTCAG...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCATCGGGAAGGCACCTaGAGAATGACATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGHREGT*RMTFGL
Trigger: GAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCACACCACAGACAATaGAGGAAGAGGCTTTTTATT +
Preference number: 4 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDSHHRQ*RKRLFI
Trigger: AATAAAAAGCCTCTTCCTGCATTGTCTGTGGTGTGA...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTAGAAGGAAAAGGCGCTaGACCCGGGCAACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGRRKRR*TRATFH
Trigger: GTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCT...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGACAAAGAGCAGCTGCTaGATGTCACCCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRTKSSC*MSPSNT
Trigger: GGTGTTTGAGGGTGACATCCAGCAGCTGCTCTTTGT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTGTTTCCTATTCCACCTaGGGGACCTTGTGGGCCATC +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFVSYST*GTLWAI
Trigger: GATGGCCCACAAGGTCCCCCAGGTGGAATAGGAAAC...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAGTTTCCTATTCCACCTaGGGGACCTTGTGGGCCATC +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIVSYST*GTLWAI
Trigger: GATGGCCCACAAGGTCCCCCAGGTGGAATAGGAAAC...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACACCCTGGAGAGACTCATaGAGTTCATTGTACATTACT +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTPWRDS*SSLYIT
Trigger: AGTAATGTACAATGAACTCCATGAGTCTCTCCAGGG...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGTGGGTGGCTTGTTTGTaGCTTCCTAAGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRWVACL*LPKLEL
Trigger: CAGTTCCAGCTTAGGAAGCCACAAACAAGCCACCCA...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATTGGGTGGCTTGTTTGTaGCTTCCTAAGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNWVACL*LPKLEL
Trigger: CAGTTCCAGCTTAGGAAGCCACAAACAAGCCACCCA...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGGTGTTTTGTTCCTCCTaGGTGGCTTGTTTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTVFCSS*VACLWL
Trigger: AAGCCACAAACAAGCCACCCAGGAGGAACAAAACAC...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGAGTCGAGGATCAAGGTaGCATTTTTCTTGTGGACGC +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRSRGSR*HFSCGR
Trigger: GCGTCCACAAGAAAAATGTCACCTTGATCCTCGACT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAAATCCAAATTTCTGTaGCGCTTCACCGAAGTCATT +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWKSKFL*RFTEVI
Trigger: AATGACTTCGGTGAAGCGTCACAGAAATTTGGATTT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGAAGGCACCTGCAGAATaGCATTTGGCCTCTAAATGG +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRKAPAE*HLASKW
Trigger: CCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATGTTTCCGTGCATGATTaGAAGCCAGGCACACTTAAC +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNVSVHD*KPGTLN
Trigger: GTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAAC...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTAGCGCATGGCATGACTaGACGGCTTGGAACAAACAC +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFSAWHD*TAWNKH
Trigger: GTGTTTGTTCCAAGCCGTTCAGTCATGCCATGCGCT...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAGTATTTCAAAAGGCCTaGTGTCCTCGAAACTTTATC +
Preference number: 4 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTVFQKA*CPRNFI
Trigger: GATAAAGTTTCGAGGACATCAGGCCTTTTGAAATAC...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGGAAAGGAAAGTGACGTaGATTGATCTTAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWERKVT*IDLRVL
Trigger: AAGGACTCTAAGATCAATGCACGTCACTTTCCTTTC...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATATTCCTAAGCTGGAACTaGATTCTGGTGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIFLSWN*ILVVVG
Trigger: CCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAA...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGTCACAGTTGTTAGGATaGAGAAGTCCTCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTSQLLG*RSPREM
Trigger: CATTTCCCGAGGACTTCTCCATCCTAACAACTGTGA...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTAATATTCATCTGGATTaGGGTCCTGCGACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGNIHLD*GPATVG
Trigger: CCCCACAGTCGCAGGACCCCAATCCAGATGAATATT...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTTATAGTGTCCAAATCTaGCAGTCCCTCCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFYSVQI*QSLPQP
Trigger: GGGTTGGGGGAGGGACTGCCAGATTTGGACACTATA...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCAAATATAATCTGCTATaGTCACACCACAGACAATGC +
Preference number: 4 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSKYNLL*SHHRQC
Trigger: GCATTGTCTGTGGTGTGACCATAGCAGATTATATTT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGAAGGTGACAGTCATTaGCACATGCTGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEEGDSH*HMLASW
Trigger: CCAGGATGCCAGCATGTGCCAATGACTGTCACCTTC...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAAAACGGAGGCTTTGGTaGTGGTGGGATGACCTTTAC +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIKRRLW*WWDDLY
Trigger: GTAAAGGTCATCCCACCATCACCAAAGCCTCCGTTT...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTATGCGGTCGAGGAATTTaGTGGTCTTCTTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLCGRGI*WSSFYS
Trigger: ACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCA...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGTGTAGTAGTCCTCACTaGGCACGTAGTCATAGTCCC +
Preference number: 4 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTECSSPH*ARSHSP
Trigger: GGGACTATGACTACGTGCCCAGTGAGGACTACTACA...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACGGCTCGATAATCGCTaGTTCTCCCTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIRLDNR*FSLLAF
Trigger: AAAGGCCAAAAGGGAGAACCAGCGATTATCGAGCCG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCCATCAGGCAAGTTGTaGAAATCTAGAACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGPSGKL*KSRTFR
Trigger: CCTGAAGGTTCTAGATTTTCACAACTTGCCTGATGG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAAGTCGAGGATCAAGGTaGCATTTTTCTTGTGGACGC +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFISRGSR*HFSCGR
Trigger: GCGTCCACAAGAAAAATGTCACCTTGATCCTCGACT...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTCGCATCCAGGACATTTaGGATGGGAATCCAAATAGG +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFRIQDI*DGNPNR
Trigger: CCTATTTGGATTCCCATCTCAAATGTCCTGGATGCG...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTACAGTAATCATAAGCTaGCCGGTGGTCCGAGACAAA +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFTVIIS*PVVRDK
Trigger: TTTGTCTCGGACCACCGGGCAGCTTATGATTACTGT...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAACAGTAATCATAAGCTaGCCGGTGGTCCGAGACAAA +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFITVIIS*PVVRDK
Trigger: TTTGTCTCGGACCACCGGGCAGCTTATGATTACTGT...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGAACCAAATATAATCTaGTATGGTCACACCACAGAC +
Preference number: 4 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLEPNII*YGHTTD
Trigger: GTCTGTGGTGTGACCATAGCAGATTATATTTGGTTC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGGTGACATTTTTCTTGTaGACGCTGAGAGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRVTFFL*TLRAIL
Trigger: CAGAATTGCTCTCAGCGTCCACAAGAAAAATGTCAC...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATCATTTGGCCTCTAAATaGATCGTGTTGGAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: LSKPDFSLARARLTFQGNHLASK*IVLEVV
Trigger: AACAACCTCCAACACGATCCATTTAGAGGCCAAATG...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCTGCAGAATGACATTTaGCCTCTAAATGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRLQNDI*PLNGSC
Trigger: ACACGATCCATTTAGAGGCCAAATGTCATTCTGCAG...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCTATGGCTTTTCTTTTaGAGAGATGAAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRLWLFF*RDEGDS
Trigger: ACTGTCACCTTCATCTCTTCAAAAGAAAAGCCATAG...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR GCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGTCACACCACAGACAATaGAGGAAGAGGCTTTTTATT +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVSHHRQ*RKRLFI
Trigger: AATAAAAAGCCTCTTCCTGCATTGTCTGTGGTGTGA...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGCTAAATGGATCGTGTTaGAGGTTGTTAAAAACGGAG +
Preference number: 4 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVLNGSC*RLLKTE
Trigger: CTCCGTTTTTAACAACCTCCAACACGATCCATTTAG...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACCCTGGAGAGACTCATaGAGTTCATTGTACATTACT +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIPWRDS*SSLYIT
Trigger: AGTAATGTACAATGAACTCCATGAGTCTCTCCAGGG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTAGCCAGACTTTTCTTTaGCAAGAGCGAGACTTACTT +
Preference number: 4 (lower is better)
Translates to: FYCNILWLEWSGENGTHFSQTFL*QERDLL
Trigger: AAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCT...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAAGCCAGACTTTTCTTTaGCAAGAGCGAGACTTACTT +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFISQTFL*QERDLL
Trigger: AAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCT...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR TCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAAAATCCAAATTTCTGTaGCGCTTCACCGAAGTCATT +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFIKSKFL*RFTEVI
Trigger: AATGACTTCGGTGAAGCGTCACAGAAATTTGGATTT...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CCA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACTAAATGGATCGTGTTaGAGGTTGTTAAAAACGGAG +
Preference number: 4 (lower is better)
Translates to: TETGFPCMIESQAHLTFILNGSC*RLLKTE
Trigger: CTCCGTTTTTAACAACCTCCAACACGATCCATTTAG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 90 bp GGGTGCCATGCAGAGCCGCGAGCCAGCCGTGCCGCAAGCAGGCAGTaGCGAGGTGGCCGGGCCGAGGTGGCCACTTACCAGGGACCCCCG +
Preference number: 5 (lower is better)
Translates to: GCHAEPRASRAASRQ*RGGRAEVATYQGPP
Trigger: CGGGGGTCCCTGGTAAGTGGCCACCTCGGCCCGGCCACCTCGGCACTGCCTGCTTGCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS GCA 90 bp CACACATGGCAGCGATGGGTGCCATGCAGAGCCGCGAGCCAGCCGTaGCGCAAGCAGGCAGTGCCGAGGTGGCCGGGCCGAGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: HTWQRWVPCRAASQP*RKQAVPRWPGRGGH
Trigger: GTGGCCACCTCGGCCCGGCCACCTCGGCACTGCCTGCTTGCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CCA 90 bp TGCAGAGCCGCGAGCCAGCCGTGCCGCAAGCAGGCAGTGCCGAGGTaGCCGGGCCGAGGTGGCCACTTACCAGGGACCCCCGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: CRAASQPCRKQAVPR*PGRGGHLPGTPACT
Trigger: AGTACAAGCGGGGGTCCCTGGTAAGTGGCCACCTCGGCCCGGCCACCTCGGCACTGCCTGCTTGCGGCACGGCTGGCTCGCGGCTCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS-3UTR CAA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCACCAGGGGGACCATCTaGACCCGCGGGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLTRGTI*TRGARL
Trigger: GAGCCTGGCCCCGCGGGTCAAGATGGTCCCCCTGGT...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp ATCGCCGCCACCTCCAAACCGGAAGGGCAGCATGAGCATGGTTCCTaGAGGACCGGGCAGGCCATCGGCCCCAGGAAGGCCTGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: IAATSKPEGQHEHGS*RTGQAIGPRKAWAS
Trigger: GGACGCCCAGGCCTTCCTGGGGCCGATGGCCTGCCCGGTCCTCCAGGAACCATGCTCATGCTGCCCTTCCGGTTTGGAGGTGGCGGCGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGAGACCATGGGGCCTTaGGAGCCCGCATCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGETMGP*EPASPP
Trigger: TGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCTC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCCTCCGGAGTTGCCCTaGGGGCCAGGCTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLPPELP*GPGFPV
Trigger: CACTGGGAAGCCTGGCCCCAAGGGCAACTCCGGAGG...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGGGGCCAGGGCTGCCTTaGGGACCATCATCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAGPGLP*GPSSPG
Trigger: TCCCGGAGATGATGGTCCCAAAGGCAGCCCTGGCCC...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 90 bp GGTTTGGCAAGAGCGGTGTGGCACACATGGCAGCGATGGGTGCCATaGAGAGCCGCGAGCCAGCCGTGCCGCAAGCAGGCAGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GLARAVWHTWQRWVP*RAASQPCRKQAVPR
Trigger: CCTCGGCACTGCCTGCTTGCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS GCA 90 bp GGAGCGGTTTGGCAAGAGCGGTGTGGCACACATGGCAGCGATGGGTaGCATGCAGAGCCGCGAGCCAGCCGTGCCGCAAGCAGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GAVWQERCGTHGSDG*HAEPRASRAASRQC
Trigger: GCACTGCCTGCTTGCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACCGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CCA 90 bp GAGGCGGAGCTGGATTGGAGGAGTTGGAGGTGTCGGCGGTGCTGGTaGGAATTTCGGCCCCAGCGCCTGGGTCTGTGGGCTGGTCGGGGT +
Preference number: 5 (lower is better)
Translates to: EAELDWRSWRCRRCW*EFRPQRLGLWAGRG
Trigger: ACCCCGACCAGCCCACAGACCCAGGCGCTGGGGCCGAAATTCCCACCAGCACCGCCGACACCTCCAACTCCTCCAATCCAGCTCCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp CTGGAGGCGGAGCTGGATTGGAGGAGTTGGAGGTGTCGGCGGTGCTaGTGGGAATTTCGGCCCCAGCGCCTGGGTCTGTGGGCTGGTCGG +
Preference number: 5 (lower is better)
Translates to: LEAELDWRSWRCRRC*WEFRPQRLGLWAGR
Trigger: CCGACCAGCCCACAGACCCAGGCGCTGGGGCCGAAATTCCCACCAGCACCGCCGACACCTCCAACTCCTCCAATCCAGCTCCGCCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCTCCAGGGTCCCCGACTaGGCCAGTGGGACCCATGGT +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGSRVPD*ASGTHG
Trigger: ACCATGGGTCCCACTGGCCAAGTCGGGGACCCTGGA...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCATGCCATCGGCCCCCTaGACTCCTCGAGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGMPSAP*TPRGPG
Trigger: CCCAGGTCCTCGAGGAGTCAAGGGGGCCGATGGCAT...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGGGCCAGGGCTGCCTTaGGGACCATCATCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGGPGLP*GPSSPG
Trigger: TCCCGGAGATGATGGTCCCAAAGGCAGCCCTGGCCC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp CCAGGGTCAGGACGTGCACGGGACACTCACGAACGAATGGCATGCTaGGGTCACGAGGTTGCTCTCGGGAGCCCGGGCTCGGCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: PGSGRARDTHERMAC*GHEVALGSPGSAAP
Trigger: AGGAGCCGCCGAGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCACGTCCTGACCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 90 bp CCAGCTGGTCCCCTCAGTGCCAACCTGGCCTGCTGGAGAATGGCTTaGGCCTGGGACTCCTGGGCTGAGACCATGGGGCCTTTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PAGPLSANLACWRMA*AWDSWAETMGPLEP
Trigger: GGGCTCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCAGGCCAGGTTGGCACTGAGGGGACCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp GGTCCCCTCAGTGCCAACCTGGCCTGCTGGAGAATGGCTTGCGCCTaGGACTCCTGGGCTGAGACCATGGGGCCTTTGGAGCCCGCATCG +
Preference number: 5 (lower is better)
Translates to: GPLSANLACWRMACA*DSWAETMGPLEPAS
Trigger: CGATGCGGGCTCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCAGGCCAGGTTGGCACTGAGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp TTCTCCGTCGTCACCCCTTTCTCCATCGTCTCCCGGAGGTCCTGGTaGGCCGGAAGGACCAGGGTCACCCCTGTGGCCCTTCTCGCCTGG +
Preference number: 5 (lower is better)
Translates to: FSVVTPFSIVSRRSW*AGRTRVTPVALLAW
Trigger: CCAGGCGAGAAGGGCCACAGGGGTGACCCTGGTCCTTCCGGCCCACCAGGACCTCCGGGAGACGATGGAGAAAGGGGTGACGACGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp CTCTCCCACTGCACCAGGGTTTCCTATTCCACCTGGGGGACCTTGTaGGCCATCAGCACCTGGAGCTCCGGAGGGTCCTCGGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LSHCTRVSYSTWGTL*AISTWSSGGSSGAR
Trigger: CCTGGCCCCCGAGGACCCTCCGGAGCTCCAGGTGCTGATGGCCCACAAGGTCCCCCAGGTGGAATAGGAAACCCTGGTGCAGTGGGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGCTTCCACGGGCTTCTaGCTGGGGGTGGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAASTGF*LGVGSF
Trigger: GAAGGAGCCCACCCCCAGCAAGAAGCCCGTGGAAGC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGACCCTTGGGGCCAGTTaGTCCAGGCATTCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEATLGAS*SRHSSG
Trigger: GCCAGAGGAATGCCTGGACAAACTGGCCCCAAGGGT...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGACCCACATTTCCTTTaGGCCCCGGCTGGCCGTCCA +
Preference number: 5 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLDPHFL*APAGRP
Trigger: TGGACGGCCAGCCGGGGCCAAAAGGAAATGTGGGTC...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGCAGGAGGGAGTGTGCTaGGCTATCCTGCCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAQEGVC*AILPSG
Trigger: TCCACTGGGCAGGATAGCCAAGCACACTCCCTCCTG...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp CAACCTGGCCTGCTGGAGAATGGCTTGCGCCTGGGACTCCTGGGCTaGGACCATGGGGCCTTTGGAGCCCGCATCGCCGCCACCTCCAAA +
Preference number: 5 (lower is better)
Translates to: QPGLLENGLRLGLLG*DHGAFGARIAATSK
Trigger: TTTGGAGGTGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCAGGCCAGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp AACTTCTCCGTCGTCACCCCTTTCTCCATCGTCTCCCGGAGGTCCTaGTGGGCCGGAAGGACCAGGGTCACCCCTGTGGCCCTTCTCGCC +
Preference number: 5 (lower is better)
Translates to: NFSVVTPFSIVSRRS*WAGRTRVTPVALLA
Trigger: GGCGAGAAGGGCCACAGGGGTGACCCTGGTCCTTCCGGCCCACCAGGACCTCCGGGAGACGATGGAGAAAGGGGTGACGACGGAGAAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp CACAAGTCCTGGGGACAAGTGGTGCGTGGACTCCACGAGACCAGGTaGTTGCTCGAAGTGACCCAGTGCGCGCAGGTGCAGGGGCCCACG +
Preference number: 5 (lower is better)
Translates to: HKSWGQVVRGLHETR*LLEVTQCAQVQGPT
Trigger: CGTGGGCCCCTGCACCTGCGCGCACTGGGTCACTTCGAGCAACCACCTGGTCTCGTGGAGTCCACGCACCACTTGTCCCCAGGACTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 90 bp ATGTGGAGCGGTTTGGCAAGAGCGGTGTGGCACACATGGCAGCGATaGGTGCCATGCAGAGCCGCGAGCCAGCCGTGCCGCAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: MWSGLARAVWHTWQR*VPCRAASQPCRKQA
Trigger: TGCCTGCTTGCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACCGCTCCACAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CCA 90 bp TGTCACGTGATGTGGAGCGGTTTGGCAAGAGCGGTGTGGCACACATaGCAGCGATGGGTGCCATGCAGAGCCGCGAGCCAGCCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: CHVMWSGLARAVWHT*QRWVPCRAASQPCR
Trigger: GCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACCGCTCCACATCACGTGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS-3UTR CAA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGCTGGATTGGAGGAGTaGGAGGTGTCGGCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAAGLEE*EVSAVL
Trigger: CAGCACCGCCGACACCTCCAACTCCTCCAATCCAGC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCAAATCCTGTGGGTCCTaGGGGTCCATTGGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLKSCGS*GSIGSP
Trigger: CGGGGACCCAATGGACCCCAAGGACCCACAGGATTT...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCATTTATTGCACGTTCTaGGCCAGGGCGGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGIYCTF*ARAGVG
Trigger: CCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAAT...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp GTGGCCGGGCCGAGGTGGCCACTTACCAGGGACCCCCGCTTGTACTaGCTATACCAGGTGGAAGGCTGCTCTTTGGGCCAGCGGGCCATT +
Preference number: 5 (lower is better)
Translates to: VAGPRWPLTRDPRLY*LYQVEGCSLGQRAI
Trigger: AATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCCTGGTAAGTGGCCACCTCGGCCCGGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS GCA 90 bp GTGCGTGGACTCCACGAGACCAGGTGGTTGCTCGAAGTGACCCAGTaGGCGCAGGTGCAGGGGCCCACGGACCTGTTCACACCCTACACA +
Preference number: 5 (lower is better)
Translates to: VRGLHETRWLLEVTQ*AQVQGPTDLFTPYT
Trigger: TGTGTAGGGTGTGAACAGGTCCGTGGGCCCCTGCACCTGCGCGCACTGGGTCACTTCGAGCAACCACCTGGTCTCGTGGAGTCCACGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 90 bp CCTGGTTCGCCGGCATTCCCGGCCCGATCTCCGACGGGGAGCTGGTaGGGTCGTAGTAGGGGTCGTAGTAGTTCTCGTCAAGGTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PGSPAFPARSPTGSW*GRSRGRSSSRQGSG
Trigger: TCCGGAACCTTGACGAGAACTACTACGACCCCTACTACGACCCCACCAGCTCCCCGTCGGAGATCGGGCCGGGAATGCCGGCGAACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp CGTAGTCCACGTAGTTCTCGCCATTCCCGTCGTCCAGCAGCTGGCTaGCGTCGATGTTCCGCCGCGTCCTGGATGCCTGGATTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RSPRSSRHSRRPAAG*RRCSAASWMPGLAG
Trigger: CCCTGCCAATCCAGGCATCCAGGACGCGGCGGAACATCGACGCCAGCCAGCTGCTGGACGACGGGAATGGCGAGAACTACGTGGACTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000460264.5
ENST00000618395.4
CDS CCA 90 bp GACACAGGGGGAAGAGAGAGGCTGTGTAAAGACGGAGGCAGAAGCTaGGGCGACGTGGCCACAAGCCAAGGAGTGTCTGGGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: DTGGRERLCKDGGRS*GDVATSQGVSGATR
Trigger: CCGGGTGGCCCCAGACACTCCTTGGCTTGTGGCCACGTCGCCCCAGCTTCTGCCTCCGTCTTTACACAGCCTCTCTCTTCCCCCTGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS GCA 90 bp GTTGGACCCGAGGAGCCCTTAGCACCTTTTGGACCAGGCGGACCCTaGAGAGAGAGGAGGGCAGAACGTCAGCAAGCCGGGTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: VGPEEPLAPFGPGGP*RERRAERQQAGSQL
Trigger: GAGCTGAGACCCGGCTTGCTGACGTTCTGCCCTCCTCTCTCTGCAGGGTCCGCCTGGTCCAAAAGGTGCTAAGGGCTCCTCGGGTCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS-3UTR CAA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAACAGAGCTGCAGGTCCTaGCAGGTGCGGGCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKQSCRS*QVRAGF
Trigger: GAACCCCGCCCGCACCTGCAAGGACCTGCAGCTCTG...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCCTCCCTTCGGACTTCTaGTCAGGGAAGACGCATGTC +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGLPSDF*SGKTHV
Trigger: GACATGCGTCTTCCCTGACAAGAAGTCCGAAGGGAG...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618395.4
CDS TCA 90 bp CTGGGTCTGTGGGCTGGTCGGGGTTCTCCTCCCCCTCGCCATAGGTaGGGTCATCATACGGTGAGGGCGTGTAGTAGTCCTCACTGGGCA +
Preference number: 5 (lower is better)
Translates to: LGLWAGRGSPPPRHR*GHHTVRACSSPHWA
Trigger: TGCCCAGTGAGGACTACTACACGCCCTCACCGTATGATGACCTCACCTATGGCGAGGGGGAGGAGAACCCCGACCAGCCCACAGACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp GGAGACCACGGTCGCCCTTCTCACCCTGTTCACCCGGAGGACCGATaGGCCCGATCAGGCCTGGATGACCCTTTTCACCTTTGGGACCAG +
Preference number: 5 (lower is better)
Translates to: GDHGRPSHPVHPEDR*ARSGLDDPFHLWDQ
Trigger: CTGGTCCCAAAGGTGAAAAGGGTCATCCAGGCCTGATCGGGCTCATCGGTCCTCCGGGTGAACAGGGTGAGAAGGGCGACCGTGGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp GGGTGGGGTCTGGGCTGCCACACAGGTGGCCTGAGACAGCGGAGGTaGATCCTACAGAAAGCACCAGTGGATGCTAAGGAGACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GWGLGCHTGGLRQRR*ILQKAPVDAKETAG
Trigger: CCCTGCTGTCTCCTTAGCATCCACTGGTGCTTTCTGTAGGATCCACCTCCGCTGTCTCAGGCCACCTGTGTGGCAGCCCAGACCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 90 bp GAGTCTTGCTGTCACGTGATGTGGAGCGGTTTGGCAAGAGCGGTGTaGCACACATGGCAGCGATGGGTGCCATGCAGAGCCGCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ESCCHVMWSGLARAV*HTWQRWVPCRAASQ
Trigger: CTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACCGCTCCACATCACGTGACAGCAAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGCCTGGCTGCCTTTCTaGGCTTTCACAGTTGTTAGG +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGAWLPF*AFTVVR
Trigger: CCTAACAACTGTGAAAGCCAAGAAAGGCAGCCAGGC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCGCCTGGCTGCCTTTCTaGGCTTTCACAGTTGTTAGG +
Preference number: 5 (lower is better)
Translates to: ERGAGPGAGVQLGHVIQLAWLPF*AFTVVR
Trigger: CCTAACAACTGTGAAAGCCAAGAAAGGCAGCCAGGC...GAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGGCAATTCTGTGCCACTaGCCATCTGACAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAAILCH*PSDRLM
Trigger: CATCAACCTGTCAGATGGCAAGTGGCACAGAATTGC...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAGGACCGGGGTCACCATaGGGACCTCCGCGACCCTTT +
Preference number: 5 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKGPGSP*GPPRPF
Trigger: AAAGGGTCGCGGAGGTCCCAATGGTGACCCCGGTCC...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCTGGCAGCATAAATTCTaGCTGCCCCGGGGCAAACTT +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGWQHKF*LPRGKL
Trigger: AAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCA...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp CACGAGGTTGCTCTCGGGAGCCCGGGCTCGGCGGCTCCTAGCCCATaGAGCAAGCCGGCCCCACTTCAAATCCAAATTTCTGTGACGCTT +
Preference number: 5 (lower is better)
Translates to: HEVALGSPGSAAPSP*SKPAPLQIQISVTL
Trigger: AAGCGTCACAGAAATTTGGATTTGAAGTGGGGCCGGCTTGCTTCATGGGCTAGGAGCCGCCGAGCCCGGGCTCCCGAGAGCAACCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTCAGAGCTGCAGGTCCTaGCAGGTGCGGGCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAQSCRS*QVRAGF
Trigger: GAACCCCGCCCGCACCTGCAAGGACCTGCAGCTCTG...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTCCTCCGGAGTTGCCCTaGGGGCCAGGCTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAPPELP*GPGFPV
Trigger: CACTGGGAAGCCTGGCCCCAAGGGCAACTCCGGAGG...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCTCTCCGGGAGGGCCTTaGGGTCCAGGGGGTCCGGCA +
Preference number: 5 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSSPGGP*GPGGPA
Trigger: TGCCGGACCCCCTGGACCCAAAGGCCCTCCCGGAGA...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTTCACCATCATCTCCTTaGTCACCAGGGGGACCATCT +
Preference number: 5 (lower is better)
Translates to: RAWGGPRRWGAARSCDSASPSSP*SPGGPS
Trigger: AGATGGTCCCCCTGGTGACAAAGGAGATGATGGTGA...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAGGATCCTGGGAGACCTaGTTCTCCCACAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKGSWET*FSHRAR
Trigger: CCTGGCCCTGTGGGAGAACAAGGTCTCCCAGGATCC...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCAGCAGTTTCCCACGCTaGAATTCACTGAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGSSFPR*NSLNQE
Trigger: CTCCTGGTTCAGTGAATTCAAGCGTGGGAAACTGCT...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371817.8
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGCTGAGGTCACGAGGTaGCTCTCGGGAGCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAAEVTR*LSGARA
Trigger: AGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp CTGACCAGCACTGAGATGCCCAGAGCTTGGGTGCAGGACCGGCTTTaGTCAGCACCTATCCCGCCCCCTCCATCACAGTCCAGAACATCC +
Preference number: 5 (lower is better)
Translates to: LTSTEMPRAWVQDRL*SAPIPPPPSQSRTS
Trigger: GGATGTTCTGGACTGTGATGGAGGGGGCGGGATAGGTGCTGATCAAAGCCGGTCCTGCACCCAAGCTCTGGGCATCTCAGTGCTGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 90 bp GCACGGCCCCGCCCACACCTCGATCTTGGAATTCTGGCCCAGAGCTaGGAGAGGATAAATCTCTGCTGTTTGCCACCGGGCTGTGACAGT +
Preference number: 5 (lower is better)
Translates to: ARPRPHLDLGILAQS*ERINLCCLPPGCDS
Trigger: ACTGTCACAGCCCGGTGGCAAACAGCAGAGATTTATCCTCTCCCAGCTCTGGGCCAGAATTCCAAGATCGAGGTGTGGGCGGGGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 90 bp GGGGAGAGGACTCCACACCTAGCTGAGTCTTGCTGTCACGTGATGTaGAGCGGTTTGGCAAGAGCGGTGTGGCACACATGGCAGCGATGG +
Preference number: 5 (lower is better)
Translates to: GERTPHLAESCCHVM*SGLARAVWHTWQRW
Trigger: CCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACCGCTCCACATCACGTGACAGCAAGACTCAGCTAGGTGTGGAGTCCTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS-3UTR CAA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCCCGTCACCTCCGGAGTaGCCCTTGGGGCCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSPSPPE*PLGPGF
Trigger: GAAGCCTGGCCCCAAGGGCAACTCCGGAGGTGACGG...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGACCAGGGGGACCATCTaGACCCGCGGGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWTRGTI*TRGARL
Trigger: GAGCCTGGCCCCGCGGGTCAAGATGGTCCCCCTGGT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AGGGAGAACGAGGCATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAATTTATTGCACGTTCTaGGCCAGGGCGGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RENEAWPGSPVRLQGDLKIYCTF*ARAGVG
Trigger: CCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAAT...TTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCTCGTTCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TCCTTCCCTCTGTTCTCTCCGGGCTGGGGTCCCACACCCCGTGGTGCCGAGGCGAAGCCAGACTTTTCTTaGGCAAGAGCGAGACTTACT +
Preference number: 5 (lower is better)
Translates to: SFPLFSPGWGPTPRGAEAKPDFS*ARARLT
Trigger: AGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTT...CGCCTCGGCACCACGGGGTGTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 90 bp AGGGCGTGTAGTAGTCCTCACTGGGCACGTAGTCATAGTCCCCGATaGCGACGTCCTCTTCCTTCCCAGCCCCTTCACTGGTTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: RACSSPHWARSHSPR*RRPLPSQPLHWFQA
Trigger: TGCCTGAAACCAGTGAAGGGGCTGGGAAGGAAGAGGACGTCGGCATCGGGGACTATGACTACGTGCCCAGTGAGGACTACTACACGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp CCCCCACCAGCTCATTACCCAAGAGAGGGATCCGCTGGCAGGAAGTaGGAGTTGGTGAGGGTGACCGTCCCCACAGTCCTAATGGATTTC +
Preference number: 5 (lower is better)
Translates to: PPPAHYPREGSAGRK*ELVRVTVPTVLMDF
Trigger: GAAATCCATTAGGACTGTGGGGACGGTCACCCTCACCAACTCCCACTTCCTGCCAGCGGATCCCTCTCTTGGGTAATGAGCTGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463925.1
CDS-3UTR CAA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGCAGGGTACAGCTGCTaGGTGGGTGCGCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: PNRLLGKDVLQAALERLMAGYSC*VGALSC
Trigger: GCAGCTCAGCGCACCCACCAAGCAGCTGTACCCTGC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCGCTTCCACGGGCTTCTaGCTGGGGGTGGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSASTGF*LGVGSF
Trigger: GAAGGAGCCCACCCCCAGCAAGAAGCCCGTGGAAGC...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTAAACCCCGGTCACCCTaGGGGCCAGTTTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAKPRSP*GPVCPG
Trigger: GCCTGGACAAACTGGCCCCAAGGGTGACCGGGGTTT...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACGGCCACGCTCACCCATaGGGCCCGTTTCTCCCGTGG +
Preference number: 5 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYGHAHP*GPFLPW
Trigger: CCACGGGAGAAACGGGCCCAATGGGTGAGCGTGGCC...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACATCGGCCAGCTGGGCCTaGTGGGCCTTTCTCGCCAGG +
Preference number: 5 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTSASWA*WAFLAR
Trigger: CCTGGCGAGAAAGGCCCACAAGGCCCAGCTGGCCGA...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCTCCACCTGGGGGACCTaGTGGGCCATCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSSTWGT*WAISTW
Trigger: CCAGGTGCTGATGGCCCACAAGGTCCCCCAGGTGGA...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCTGAGGTCACGAGGTaGCTCTCGGGAGCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIAEVTR*LSGARA
Trigger: AGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGGATCGTGTTGGAGGTaGTTAAAAACGGAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RAWGGPRRWGAARSCDSAGSCWR*LKTEAL
Trigger: CAAAGCCTCCGTTTTTAACAACCTCCAACACGATCC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCAAGCCAGACTTTTCTTaGGCAAGAGCGAGACTTACT +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGKPDFS*ARARLT
Trigger: AGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTT...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp GGGACCCCCGCTTGTACTGACTATACCAGGTGGAAGGCTGCTCTTTaGGCCAGCGGGCCATTTTACTCCCTTCGGACTTCTTGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: GTPACTDYTRWKAAL*ASGPFYSLRTSCQG
Trigger: TCCCTGACAAGAAGTCCGAAGGGAGTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371820.3
ENST00000618395.4
CDS CCA 90 bp GGGACCCCCGCTTGTACTGACTATACCAGGTGGAAGGCTGCTCTTTaGGCCAGCGGGCCATTTTACTCTGTAAGATACGAGATGGGCGGG +
Preference number: 5 (lower is better)
Translates to: GTPACTDYTRWKAAL*ASGPFYSVRYEMGG
Trigger: CCCGCCCATCTCGTATCTTACAGAGTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460264.5
ENST00000465877.1
CDS CCA 90 bp GCACGGGAGATTTTCACAGCATGTCCCGCTAGTCATCAGCAACGTTaGAAGAGAACGTGCATGGCACACGGCCTACAGCCTGCGACGAGG +
Preference number: 5 (lower is better)
Translates to: AREIFTACPASHQQR*KRTCMAHGLQPATR
Trigger: CCTCGTCGCAGGCTGTAGGCCGTGTGCCATGCACGTTCTCTTCCAACGTTGCTGATGACTAGCGGGACATGCTGTGAAAATCTCCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463925.1
CDS-3UTR CAA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCAGGGTACAGCTGCTaGGTGGGTGCGCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIAGYSC*VGALSC
Trigger: GCAGCTCAGCGCACCCACCAAGCAGCTGTACCCTGC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTTTGCCATCTGACAGGTaGATGCCCCGGAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLALPSDR*MPRKRG
Trigger: CCCCCTCTTCCGGGGCATCAACCTGTCAGATGGCAA...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACGCTGGATTGGAGGAGTaGGAGGTGTCGGCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDAGLEE*EVSAVL
Trigger: CAGCACCGCCGACACCTCCAACTCCTCCAATCCAGC...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCCGCTGGTTCTCCCTTTaGGCCTTTCTCGCCCCGAGG +
Preference number: 5 (lower is better)
Translates to: FKSSRHNPVLITALGSGRRWFSL*AFLAPR
Trigger: CCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGCG...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCTCCAGGGTCCCCGACTaGGCCAGTGGGACCCATGGT +
Preference number: 5 (lower is better)
Translates to: HGRRKRRCTRATFHSEEISRVPD*ASGTHG
Trigger: ACCATGGGTCCCACTGGCCAAGTCGGGGACCCTGGA...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGACCCACATTTCCTTTaGGCCCCGGCTGGCCGTCCA +
Preference number: 5 (lower is better)
Translates to: PNRLLGKDVLQAALERLMDPHFL*APAGRP
Trigger: TGGACGGCCAGCCGGGGCCAAAAGGAAATGTGGGTC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCCACCCTTCTCGCCCTTaGTGCCCTTCAGACCACGGA +
Preference number: 5 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVHPSRP*CPSDHG
Trigger: TCCGTGGTCTGAAGGGCACAAAGGGCGAGAAGGGTG...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTTCTCCTTTGTCCCCCTaGCTTCCTTTCTGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLASPLSP*LPFCPG
Trigger: GCCGGGGCAGAAAGGAAGCAAGGGGGACAAAGGAGA...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACCTGTCCGATGGGGCCTaGAGGACCTGTAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYLSDGA*RTCRPR
Trigger: CCTGGGCCTACAGGTCCTCAAGGCCCCATCGGACAG...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGCTGTCCGATGGGGCCTaGAGGACCTGTAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWLSDGA*RTCRPR
Trigger: CCTGGGCCTACAGGTCCTCAAGGCCCCATCGGACAG...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGGCACCTGCTCCACTTaGGGGGTGTCGATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAGTCST*GVSISR
Trigger: TCTGGAGATCGACACCCCCAAAGTGGAGCAGGTGCC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp TGCCCAGGGGCCGTTTCATCTGCTCAATCTCCAGCTTCAGAGAGTTaGGAGAGCCGAAGATCTCTTCCATGCCGTCCGCGTAGTCCACGT +
Preference number: 5 (lower is better)
Translates to: CPGAVSSAQSPASES*ESRRSLPCRPRSPR
Trigger: ACGTGGACTACGCGGACGGCATGGAAGAGATCTTCGGCTCTCTCAACTCTCTGAAGCTGGAGATTGAGCAGATGAAACGGCCCCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371817.8
ENST00000371820.3
ENST00000460264.5
ENST00000618395.4
CDS GCA 90 bp GTGCCAATACTTACCTGTTCTCCTTTGTCCCCCTTGCTTCCTTTCTaGCCCGGCTCCCCGATCTCTCCCTTATCTCCGTCTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: VPILTCSPLSPLLPF*PGSPISPLSPSSPG
Trigger: CCCTGGAGAAGACGGAGATAAGGGAGAGATCGGGGAGCCGGGGCAGAAAGGAAGCAAGGGGGACAAAGGAGAACAGGTAAGTATTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463925.1
CDS CCA 90 bp GGATCCTACAGAAAGCACCAGTGGATGCTAAGGAGACAGCAGGGCTaGGTAGATGCGGGTCTTGGACCGAGGACCTCAAACACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GSYRKHQWMLRRQQG*VDAGLGPRTSNTSS
Trigger: TGAGGAGGTGTTTGAGGTCCTCGGTCCAAGACCCGCATCTACCCAGCCCTGCTGTCTCCTTAGCATCCACTGGTGCTTTCTGTAGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 90 bp GGTGGCCACTTACCAGGGACCCCCGCTTGTACTGACTATACCAGGTaGAAGGCTGCTCTTTGGGCCAGCGGGCCATTTTACTCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: GGHLPGTPACTDYTR*KAALWASGPFYSVR
Trigger: TCTTACAGAGTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCCTGGTAAGTGGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS-3UTR CAA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGGCGACATCCGGGCCTTaGGAAGATCGCCGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTATSGP*EDRRVA
Trigger: CGCCACGCGGCGATCTTCCAAAGGCCCGGATGTCGC...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCCTTGGGGCCAGTTaGTCCAGGCATTCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSTLGAS*SRHSSG
Trigger: GCCAGAGGAATGCCTGGACAAACTGGCCCCAAGGGT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAAACCCCGGTCACCCTaGGGGCCAGTTTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWKPRSP*GPVCPG
Trigger: GCCTGGACAAACTGGCCCCAAGGGTGACCGGGGTTT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCCTCCTGGAGGACCAATaGCACCCTGGGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HGRRKRRCTRATFHSEEILLEDQ*HPGGLE
Trigger: TTCCAGGCCCCCAGGGTGCAATTGGTCCTCCAGGAG...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGGTCCTTGGGGTCCATaGGGTCCCCGTTCACCAGGA +
Preference number: 5 (lower is better)
Translates to: HGRRKRRCTRATFHSEEIGPWGP*GPRSPG
Trigger: TCCTGGTGAACGGGGACCCAATGGACCCCAAGGACC...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCAAATCCTGTGGGTCCTaGGGGTCCATTGGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSKSCGS*GSIGSP
Trigger: CGGGGACCCAATGGACCCCAAGGACCCACAGGATTT...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCTCCTTTGTCCCCCTaGCTTCCTTTCTGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDSPLSP*LPFCPG
Trigger: GCCGGGGCAGAAAGGAAGCAAGGGGGACAAAGGAGA...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGAAGCCGGCTTCTCCCTaGGCCCCTTTCTCTCCCTGT +
Preference number: 5 (lower is better)
Translates to: PNRLLGKDVLQAALERLMKPASP*APFSPC
Trigger: ACAGGGAGAGAAAGGGGCCAAGGGAGAAGCCGGCTT...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGGACCAGAATCTCCTTaGAGGCCGGGAAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: FKSSRHNPVLITALGSGRGPESP*RPGSPG
Trigger: CCCAGGACTTCCCGGCCTCAAAGGAGATTCTGGTCC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGCCCCTTCGGACTTCTaGTCAGGGAAGACGCATGTC +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAAPSDF*SGKTHV
Trigger: GACATGCGTCTTCCCTGACAAGAAGTCCGAAGGGGC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371817.8
CDS-3UTR CAA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGGCACCTGCTCCACTTaGGGGGTGTCGATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PNRLLGKDVLQAALERLMGTCST*GVSISR
Trigger: TCTGGAGATCGACACCCCCAAAGTGGAGCAGGTGCC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTGACTCATGGAGTTCATaGTACATTACTCCATCTACC +
Preference number: 5 (lower is better)
Translates to: RAWGGPRRWGAARSCDSADSWSS*YITPST
Trigger: GGTAGATGGAGTAATGTACAATGAACTCCATGAGTC...AGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGCACGCTGGCGGTGTTTaGTTCCTCCTGGGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: PNRLLGKDVLQAALERLMHAGGV*FLLGGL
Trigger: CAAGCCACCCAGGAGGAACAAAACACCGCCAGCGTG...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp GATAGCTCTGAGCTGCTTTTCATCCCAGGTGAAACTGACCAGCACTaGGATGCCCAGAGCTTGGGTGCAGGACCGGCTTTGATCAGCACC +
Preference number: 5 (lower is better)
Translates to: DSSELLFIPGETDQH*DAQSLGAGPALIST
Trigger: GGTGCTGATCAAAGCCGGTCCTGCACCCAAGCTCTGGGCATCTCAGTGCTGGTCAGTTTCACCTGGGATGAAAAGCAGCTCAGAGCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS GCA 90 bp CTCGATCTTGGAATTCTGGCCCAGAGCTGGGAGAGGATAAATCTCTaGTGTTTGCCACCGGGCTGTGACAGTTGGTTGCAGCAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LDLGILAQSWERINL*CLPPGCDSWLQQSQ
Trigger: CTGGGACTGCTGCAACCAACTGTCACAGCCCGGTGGCAAACAGCAGAGATTTATCCTCTCCCAGCTCTGGGCCAGAATTCCAAGATCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 90 bp GTCTCCTTCCGTGTAATATTCATCTGGATTGGGGTCCTGCGACTGTaGGGTGTCAGGTACTGCGGTGTCACAGTCAGGGCTGTAGTGCTC +
Preference number: 5 (lower is better)
Translates to: VSFRVIFIWIGVLRL*GVRYCGVTVRAVVL
Trigger: GAGCACTACAGCCCTGACTGTGACACCGCAGTACCTGACACCCCACAGTCGCAGGACCCCAATCCAGATGAATATTACACGGAAGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp CTTACGGGCAAACCAGGGACCCCCGCTTGTACTGACTATACCAGGTaGAAGGCTGCTCTTTGGGCCAGCGGGCCATTTTACTCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: LTGKPGTPACTDYTR*KAALWASGPFYSVR
Trigger: TCTTACAGAGTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCCTGGTTTGCCCGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465877.1
CDS-3UTR CAA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGTCCAGCTTCAGAGAGTaGAGAGAGCCGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSSSFRE*REPKIS
Trigger: AGAGATCTTCGGCTCTCTCAACTCTCTGAAGCTGGA...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGGCGACATCCGGGCCTTaGGAAGATCGCCGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVATSGP*EDRRVA
Trigger: CGCCACGCGGCGATCTTCCAAAGGCCCGGATGTCGC...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGTAGAAGGAAAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCTTGCCATCTGACAGGTaGATGCCCCGGAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: HGRRKRRCTRATFHSEEILPSDR*MPRKRG
Trigger: CCCCCTCTTCCGGGGCATCAACCTGTCAGATGGCAA...GATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATGAGACCATGGGGCCTTaGGAGCCCGCATCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LSKPDFSLARARLTFQGNETMGP*EPASPP
Trigger: TGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCTC...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACCACCCTTCTCGCCCTTaGTGCCCTTCAGACCACGGA +
Preference number: 5 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYHPSRP*CPSDHG
Trigger: TCCGTGGTCTGAAGGGCACAAAGGGCGAGAAGGGTG...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACAGGGCCGGTCTTGCCTaGGAAACCAGTCTCGCCTCT +
Preference number: 5 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYRAGLA*ETSLAS
Trigger: AGAGGCGAGACTGGTTTCCAAGGCAAGACCGGCCCT...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCCAGGGGGCCCTTCATaGCCTTTCAGTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDPGGPS*PFSPRA
Trigger: AGCTCTTGGACTGAAAGGCAATGAAGGGCCCCCTGG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGTCGGCCAGCTGGGCCTaGTGGGCCTTTCTCGCCAGG +
Preference number: 5 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRSASWA*WAFLAR
Trigger: CCTGGCGAGAAAGGCCCACAAGGCCCAGCTGGCCGA...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGCAGGAGGGAGTGTGCTaGGCTATCCTGCCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWQEGVC*AILPSG
Trigger: TCCACTGGGCAGGATAGCCAAGCACACTCCCTCCTG...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGGCCCAGGCGCTGGGGTGCAGCTAGGTCATGTGATTCAGCTCCAGGTGGGGGCGGAAGAGGCTTTTTATaGCTTGTGTGTGTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: GPRRWGAARSCDSAPGGGGRGFL*LVCVFK
Trigger: TTTGAAAACACACACAAGCAATAAAAAGCCTCTTCC...GCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp CCAGAGCTGGGAGAGGATAAATCTCTGCTGTTTGCCACCGGGCTGTaGCAGTTGGTTGCAGCAGTCCCAGGAGATCATGCAGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: PELGEDKSLLFATGL*QLVAAVPGDHAECN
Trigger: ATTGCACTCTGCATGATCTCCTGGGACTGCTGCAACCAACTGTCACAGCCCGGTGGCAAACAGCAGAGATTTATCCTCTCCCAGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS-3UTR CAA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAGTGGAAGGCTGCTCTTaGGGCCAGCGGGCCATTTTA +
Preference number: 5 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTVEGCS*GQRAIL
Trigger: TAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCAC...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGGAGGCGGAGCTGGATaGGAGGAGTTGGAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLGGGAG*EELEVS
Trigger: CGACACCTCCAACTCCTCCAATCCAGCTCCGCCTCC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACGGACCAGGCGGGCCTaGCACACCTCGAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: TETGFPCMIESQAHLTFIRTRRA*HTSRTL
Trigger: CAGGGTCCTCGAGGTGTGCAAGGCCCGCCTGGTCCG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGATGCCATCGGCCCCCTaGACTCCTCGAGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVMPSAP*TPRGPG
Trigger: CCCAGGTCCTCGAGGAGTCAAGGGGGCCGATGGCAT...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGGACCCTGTTCTCCTTaGTCCCCCTTGCTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: PNRLLGKDVLQAALERLMGPCSP*SPLLPF
Trigger: GAAAGGAAGCAAGGGGGACAAAGGAGAACAGGGTCC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGGACCCTGTTCTCCTTaGTCCCCCTTGCTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: FKSSRHNPVLITALGSGRGPCSP*SPLLPF
Trigger: GAAAGGAAGCAAGGGGGACAAAGGAGAACAGGGTCC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGTCTCCGGGAGGGCCTTaGGGTCCAGGGGGTCCGGCA +
Preference number: 5 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTESPGGP*GPGGPA
Trigger: TGCCGGACCCCCTGGACCCAAAGGCCCTCCCGGAGA...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTTCACCATCATCTCCTTaGTCACCAGGGGGACCATCT +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLASPSSP*SPGGPS
Trigger: AGATGGTCCCCCTGGTGACAAAGGAGATGATGGTGA...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTAGGATCCTGGGAGACCTaGTTCTCCCACAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLGSWET*FSHRAR
Trigger: CCTGGCCCTGTGGGAGAACAAGGTCTCCCAGGATCC...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGCAAACTTCCAATTTATaGCACGTTCTTGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSQTSNL*HVLGQG
Trigger: GCCCTGGCCAAGAACGTGCAATAAATTGGAAGTTTG...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp TGGGAGAGGATAAATCTCTGCTGTTTGCCACCGGGCTGTGACAGTTaGTTGCAGCAGTCCCAGGAGATCATGCAGAGTGCAATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: WERINLCCLPPGCDS*LQQSQEIMQSAMSL
Trigger: CAAGGACATTGCACTCTGCATGATCTCCTGGGACTGCTGCAACCAACTGTCACAGCCCGGTGGCAAACAGCAGAGATTTATCCTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS-3UTR CAA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCTCCAGCTTCAGAGAGTaGAGAGAGCCGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVSSFRE*REPKIS
Trigger: AGAGATCTTCGGCTCTCTCAACTCTCTGAAGCTGGA...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGACCTCTGTGGTTTCTTaGGCAGCTTCCACGGGCTTC +
Preference number: 5 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWTSVVS*AASTGF
Trigger: GAAGCCCGTGGAAGCTGCCAAAGAAACCACAGAGGT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGCCGTCACCTCCGGAGTaGCCCTTGGGGCCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEPSPPE*PLGPGF
Trigger: GAAGCCTGGCCCCAAGGGCAACTCCGGAGGTGACGG...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGGGTCCTTGGGGTCCATaGGGTCCCCGTTCACCAGGA +
Preference number: 5 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRGPWGP*GPRSPG
Trigger: TCCTGGTGAACGGGGACCCAATGGACCCCAAGGACC...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTGGCCACGCTCACCCATaGGGCCCGTTTCTCCCGTGG +
Preference number: 5 (lower is better)
Translates to: FYCNILWLEWSGENGTHFGHAHP*GPFLPW
Trigger: CCACGGGAGAAACGGGCCCAATGGGTGAGCGTGGCC...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTTCCACCTGGGGGACCTaGTGGGCCATCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGSTWGT*WAISTW
Trigger: CCAGGTGCTGATGGCCCACAAGGTCCCCCAGGTGGA...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTGGCAGCATAAATTCTaGCTGCCCCGGGGCAAACTT +
Preference number: 5 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDWQHKF*LPRGKL
Trigger: AAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCA...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 90 bp CCAGAGGGTTTAATTAACTGTGGCAGGTGCCGCCCCACGACTGGGTaGCAGGGACAACTTGGATGCTGTATCTTAGAGCTAATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PEGLINCGRCRPTTG*QGQLGCCILELMLL
Trigger: AAGCAGCATTAGCTCTAAGATACAGCATCCAAGTTGTCCCTGTCACCCAGTCGTGGGGCGGCACCTGCCACAGTTAATTAAACCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS GCA 90 bp ACAGACGCAGAGAGGTACGACCACGTGTTAACTATTCCCTACCACTaGCGCGCGCATCTTTTACACGGAATGGGCCATTTACATCCTCTC +
Preference number: 5 (lower is better)
Translates to: TDAERYDHVLTIPYH*RAHLLHGMGHLHPL
Trigger: GAGAGGATGTAAATGGCCCATTCCGTGTAAAAGATGCGCGCGGCAGTGGTAGGGAATAGTTAACACGTGGTCGTACCTCTCTGCGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 90 bp ATCCGGGTGCCAAACACGATGATGCCATTGATGTCGATCATGGGGTaGTCGCTGCGGTCGAGGAATTTGGTGGTCTTCTTTTTACAGTCG +
Preference number: 5 (lower is better)
Translates to: IRVPNTMMPLMSIMG*SLRSRNLVVFFLQS
Trigger: CGACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAGCGACCACCCCATGATCGACATCAATGGCATCATCGTGTTTGGCACCCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000464187.1
ENST00000618395.4
CDS-3UTR CAA 90 bp CCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGCAATTCTGTGCCACTaGCCATCTGACAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: PNRLLGKDVLQAALERLMAILCH*PSDRLM
Trigger: CATCAACCTGTCAGATGGCAAGTGGCACAGAATTGC...CATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTTGCTCTCGAAGGTGACATTTTTCTaGTGGACGCTGAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: VHGTLTNEWHAEVTRLLSKVTFF*WTLRAI
Trigger: AATTGCTCTCAGCGTCCACAAGAAAAATGTCACCTT...CGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGGAGGCGGAGCTGGATaGGAGGAGTTGGAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGGGGAG*EELEVS
Trigger: CGACACCTCCAACTCCTCCAATCCAGCTCCGCCTCC...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCGCTGGTTCTCCCTTTaGGCCTTTCTCGCCCCGAGG +
Preference number: 5 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGRWFSL*AFLAPR
Trigger: CCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGCG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTCTCCTGGAGGACCAATaGCACCCTGGGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGLLEDQ*HPGGLE
Trigger: TTCCAGGCCCCCAGGGTGCAATTGGTCCTCCAGGAG...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAGGACCGGGGTCACCATaGGGACCTCCGCGACCCTTT +
Preference number: 5 (lower is better)
Translates to: TETGFPCMIESQAHLTFIGPGSP*GPPRPF
Trigger: AAAGGGTCGCGGAGGTCCCAATGGTGACCCCGGTCC...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATAAGCCGGCTTCTCCCTaGGCCCCTTTCTCTCCCTGT +
Preference number: 5 (lower is better)
Translates to: LSKPDFSLARARLTFQGNKPASP*APFSPC
Trigger: ACAGGGAGAGAAAGGGGCCAAGGGAGAAGCCGGCTT...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGCTTCACCGAAGTCATaGAACATGATGTCCACGATG +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAASPKS*NMMSTM
Trigger: CATCGTGGACATCATGTTCAATGACTTCGGTGAAGC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCTTGATCTTAGAGTCCTaGGCAACAGACTGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: FKSSRHNPVLITALGSGRLILES*ATDCGG
Trigger: GCCTCCACAGTCTGTTGCCAAGGACTCTAAGATCAA...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TGGCTTGTTTGTGGCTTCCTAAGCTGGAACTGCATTCTGGTGGTGGTGGGGGTCATCCAAATAGGCTACTaGGAAAAGACGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WLVCGFLSWNCILVVVGVIQIGY*EKTCCR
Trigger: CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGAT...GACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGCACGCTGGCGGTGTTTaGTTCCTCCTGGGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVHAGGV*FLLGGL
Trigger: CAAGCCACCCAGGAGGAACAAAACACCGCCAGCGTG...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATGGCCAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCCTGCGGTCGAGGAATTaGGTGGTCTTCTTTTTACAG +
Preference number: 5 (lower is better)
Translates to: HGQGPQCAFKETLKQIDSLRSRN*VVFFLQ
Trigger: CTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAG...GCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACCTGCGGTCGAGGAATTaGGTGGTCTTCTTTTTACAG +
Preference number: 5 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDLRSRN*VVFFLQ
Trigger: CTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAG...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCGCTTCACCGAAGTCATaGAACATGATGTCCACGATG +
Preference number: 5 (lower is better)
Translates to: FKSSRHNPVLITALGSGRASPKS*NMMSTM
Trigger: CATCGTGGACATCATGTTCAATGACTTCGGTGAAGC...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp GGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACGGATCGTGTTGGAGGTaGTTAAAAACGGAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GIQIGYLEKTCCRQPWRDGSCWR*LKTEAL
Trigger: CAAAGCCTCCGTTTTTAACAACCTCCAACACGATCC...GTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACATTGATCTTAGAGTCCTaGGCAACAGACTGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTLILES*ATDCGG
Trigger: GCCTCCACAGTCTGTTGCCAAGGACTCTAAGATCAA...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAAGGGCCGGTCTTGCCTaGGAAACCAGTCTCGCCTCT +
Preference number: 5 (lower is better)
Translates to: TETGFPCMIESQAHLTFIRAGLA*ETSLAS
Trigger: AGAGGCGAGACTGGTTTCCAAGGCAAGACCGGCCCT...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTGGACCAGAATCTCCTTaGAGGCCGGGAAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: FYCNILWLEWSGENGTHFGPESP*RPGSPG
Trigger: CCCAGGACTTCCCGGCCTCAAAGGAGATTCTGGTCC...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGTCCTGGGTGGCTTGTTaGTGGCTTCCTAAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTSWVAC*WLPKLE
Trigger: TTCCAGCTTAGGAAGCCACAAACAAGCCACCCAGGA...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACATTATCCTGGGTGGCTTGTTaGTGGCTTCCTAAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: KRRAAGSPGETHGVHCTLSWVAC*WLPKLE
Trigger: TTCCAGCTTAGGAAGCCACAAACAAGCCACCCAGGA...TAATGTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp CTGAATCAGAAAGAGGAGCTCATTTTAGTCCAGGCCATGAGCAAGTaGCTGGGTCAAGGCGATGAGGTTCTCCATCAACAGCTCGTTAAT +
Preference number: 5 (lower is better)
Translates to: LNQKEELILVQAMSK*LGQGDEVLHQQLVN
Trigger: ATTAACGAGCTGTTGATGGAGAACCTCATCGCCTTGACCCAGCCACTTGCTCATGGCCTGGACTAAAATGAGCTCCTCTTTCTGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS-3UTR CAA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGATCCCTGGAGCATCCTaGGTTAGGATCGACCCAGTA +
Preference number: 5 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVIPGAS*VRIDPV
Trigger: TACTGGGTCGATCCTAACCAAGGATGCTCCAGGGAT...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCAAGGTGACATTTTTCTaGTGGACGCTGAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: FKSSRHNPVLITALGSGRKVTFF*WTLRAI
Trigger: AATTGCTCTCAGCGTCCACAAGAAAAATGTCACCTT...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTACCTCTGTGGTTTCTTaGGCAGCTTCCACGGGCTTC +
Preference number: 5 (lower is better)
Translates to: HLASKWIVLEVVKNGGFGTSVVS*AASTGF
Trigger: GAAGCCCGTGGAAGCTGCCAAAGAAACCACAGAGGT...ACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTCAAATTATAACAACTTaGAAGGGACCACAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAQIITT*KGPQRK
Trigger: CTTCCTCTGTGGTCCCTTCAAAGTTGTTATAATTTG...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCACCTTGGAACATTTTTaGAAGGTCAGGGGAAATACA +
Preference number: 5 (lower is better)
Translates to: FKSSRHNPVLITALGSGRTLEHF*KVRGNT
Trigger: TGTATTTCCCCTGACCTTCAAAAAATGTTCCAAGGT...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTCAAATCAAGTAGGCACAACCCAGTCCTCATAACAGCCCTCGGGAGTGGACGCTCTAAATGGATCGTGTaGGAGGTTGTTAAAAACGGA +
Preference number: 5 (lower is better)
Translates to: FKSSRHNPVLITALGSGRSKWIV*EVVKNG
Trigger: TCCGTTTTTAACAACCTCCAACACGATCCATTTAGA...GCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTACTTGATTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp AAAGGCGCTGCACCCGGGCAACTTTTCACAGTGAAGAGATCGCCTTTCCTGGCTGGAAGAGGCTTTTTATaGCTTGTGTGTGTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: KGAAPGQLFTVKRSPFLAGRGFL*LVCVFK
Trigger: TTTGAAAACACACACAAGCAATAAAAAGCCTCTTCC...AGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 90 bp GTGGTCTTCTTTTTACAGTCGAGGATCAAGGTGACATTTTTCTTGTaGACGCTGAGAGCAATTCTGTGCCACTTGCCATCTGACAGGTTG +
Preference number: 5 (lower is better)
Translates to: VVFFLQSRIKVTFFL*TLRAILCHLPSDRL
Trigger: CAACCTGTCAGATGGCAAGTGGCACAGAATTGCTCTCAGCGTCCACAAGAAAAATGTCACCTTGATCCTCGACTGTAAAAAGAAGACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000464187.1
ENST00000618395.4
CDS-3UTR CAA 90 bp CAGGGTCCCCAGTGCGCCTTCAAGGAGACCTTAAAACAGATAGATAGCACCACAAAAAGCCTGTTGTCTTaGTTATTCCATCAGGCAAGT +
Preference number: 5 (lower is better)
Translates to: QGPQCAFKETLKQIDSTTKSLLS*LFHQAS
Trigger: ACTTGCCTGATGGAATAACAAAGACAACAGGCTTTT...TGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCATCGGGAAGGCACCTGCAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAAAAGCCTGTTGTCTTaGTTATTCCATCAGGCAAGT +
Preference number: 5 (lower is better)
Translates to: PSGRHLQNDIWPLNGSCWKSLLS*LFHQAS
Trigger: ACTTGCCTGATGGAATAACAAAGACAACAGGCTTTT...CCAACACGATCCATTTAGAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTGAGCCCGGGTTTTCTTaGGGCCAAGAAGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: FYCNILWLEWSGENGTHFEPGFS*GQEVIL
Trigger: CAGAATCACTTCTTGGCCCAAAGAAAACCCGGGCTC...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371817.8
CDS-3UTR CAA 90 bp AGGACATTTGAGATGGGAATCCAAATAGGCTACTTGGAAAAGACGTGCTGCAGGATCCAAATAGGCTACTaGGAAAAGACGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RTFEMGIQIGYLEKTCCRIQIGY*EKTCCR
Trigger: CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGAT...CCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTGGAAAAGACGTGCTGCAGGCAGCCCTGGAGAGACTCATGGAGTTCATTGTACCAAATTATAACAACTTaGAAGGGACCACAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LEKTCCRQPWRDSWSSLYQIITT*KGPQRK
Trigger: CTTCCTCTGTGGTCCCTTCAAAGTTGTTATAATTTG...GTACAATGAACTCCATGAGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATTGGCGCAAAAGCCTGTaGTCTTTGTTATTCCATCAG +
Preference number: 5 (lower is better)
Translates to: LSKPDFSLARARLTFQGNWRKSL*SLLFHQ
Trigger: CTGATGGAATAACAAAGACAACAGGCTTTTGCGCCA...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATAAACACGATGATGCCATaGATGTCGATCATGGGGTGG +
Preference number: 5 (lower is better)
Translates to: TETGFPCMIESQAHLTFINTMMP*MSIMGW
Trigger: CCACCCCATGATCGACATCAATGGCATCATCGTGTT...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGAACACGATGATGCCATaGATGTCGATCATGGGGTGG +
Preference number: 5 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTENTMMP*MSIMGW
Trigger: CCACCCCATGATCGACATCAATGGCATCATCGTGTT...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CAATGGCAGCATAAATTCTTGCTGCCCCGGGGCAAACTTCCAATTTATTGCACGGACTCATGGAGTTCATaGTACATTACTCCATCTACC +
Preference number: 5 (lower is better)
Translates to: QWQHKFLLPRGKLPIYCTDSWSS*YITPST
Trigger: GGTAGATGGAGTAATGTACAATGAACTCCATGAGTC...CGTGCAATAAATTGGAAGTTTGCCCCGGGGCAGCAAGAATTTATGCTGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp ACTGAGACTGGGTTTCCGTGCATGATTGAAAGCCAGGCACACTTAACATTTATACAAACTTCCAATTTATaGCACGTTCTTGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: TETGFPCMIESQAHLTFIQTSNL*HVLGQG
Trigger: GCCCTGGCCAAGAACGTGCAATAAATTGGAAGTTTG...TATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 90 bp AGTATTCCATGTTTCAACAGCTTCTGTAAACTTACTCCAAACGGTTaGATAACAGACGCAGAGAGGTACGACCACGTGTTAACTATTCCC +
Preference number: 5 (lower is better)
Translates to: SIPCFNSFCKLTPNG*ITDAERYDHVLTIP
Trigger: GGGAATAGTTAACACGTGGTCGTACCTCTCTGCGTCTGTTATGCAACCGTTTGGAGTAAGTTTACAGAAGCTGTTGAAACATGGAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS-3UTR CAA 90 bp CAGAATGACATTTGGCCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGTGGCGCAAAAGCCTGTaGTCTTTGTTATTCCATCAG +
Preference number: 5 (lower is better)
Translates to: QNDIWPLNGSCWRLLKTEWRKSL*SLLFHQ
Trigger: CTGATGGAATAACAAAGACAACAGGCTTTTGCGCCA...CTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGGCCAAATGTCATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CTCTCCAAGCCAGACTTTTCTTTGGCAAGAGCGAGACTTACTTTCCAGGGAAATACCTTGGAACATTTTTaGAAGGTCAGGGGAAATACA +
Preference number: 5 (lower is better)
Translates to: LSKPDFSLARARLTFQGNTLEHF*KVRGNT
Trigger: TGTATTTCCCCTGACCTTCAAAAAATGTTCCAAGGT...ATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp CCTCTAAATGGATCGTGTTGGAGGTTGTTAAAAACGGAGGCTTTGGTGATGGTGTGTCTAGCGGATTTTTaGAAACCGTACAATGTGTCA +
Preference number: 5 (lower is better)
Translates to: PLNGSCWRLLKTEALVMVCLADF*KPYNVS
Trigger: TGACACATTGTACGGTTTCAAAAAATCCGCTAGACA...CACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS-3UTR CAA 90 bp TTTTATTGCAATATACTGTGGCTAGAGTGGTCTGGGGAGAACGGGACACATTTTTGTCTAGCGGATTTTTaGAAACCGTACAATGTGTCA +
Preference number: 5 (lower is better)
Translates to: FYCNILWLEWSGENGTHFCLADF*KPYNVS
Trigger: TGACACATTGTACGGTTTCAAAAAATCCGCTAGACA...AAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAATAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp GCGAGCCAGCCGTGCCGCAAGCAGGCAGTGCCGAGGTaGCCGGGCCGAGGTGGCCACTTACCAGGGACCCCC +
Preference number: 6 (lower is better)
Translates to: ASQPCRKQAVPR*PGRGGHLPGTP
Trigger: GGGGGTCCCTGGTAAGTGGCCACCTCGGCCCGGCCACCTCGGCACTGCCTGCTTGCGGCACGGCTGGCTCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS GCA 72 bp GCAGAGCCGCGAGCCAGCCGTGCCGCAAGCAGGCAGTaGCGAGGTGGCCGGGCCGAGGTGGCCACTTACCAG +
Preference number: 6 (lower is better)
Translates to: AEPRASRAASRQ*RGGRAEVATYQ
Trigger: CTGGTAAGTGGCCACCTCGGCCCGGCCACCTCGGCACTGCCTGCTTGCGGCACGGCTGGCTCGCGGCTCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS GCA 72 bp CAGCGATGGGTGCCATGCAGAGCCGCGAGCCAGCCGTaGCGCAAGCAGGCAGTGCCGAGGTGGCCGGGCCGA +
Preference number: 6 (lower is better)
Translates to: QRWVPCRAASQP*RKQAVPRWPGR
Trigger: TCGGCCCGGCCACCTCGGCACTGCCTGCTTGCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCCATCGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CCA 72 bp GGGTCCAGGGGGCCCAGGGTGGCCACGCTCACCCATTaGGCCCGTTTCTCCCGTGGGACCCTGAGGGCCGAC +
Preference number: 6 (lower is better)
Translates to: GSRGPRVATLTH*ARFSRGTLRAD
Trigger: GTCGGCCCTCAGGGTCCCACGGGAGAAACGGGCCCAATGGGTGAGCGTGGCCACCCTGGGCCCCCTGGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CAA 72 bp CCGTCTTCCGGGCTTCCCGGCCGGACCAGGCGGGCCTaGCACACCTCGAGGACCCTGAGGCCCCACGTCTCC +
Preference number: 6 (lower is better)
Translates to: PSSGLPGRTRRA*HTSRTLRPHVS
Trigger: GGAGACGTGGGGCCTCAGGGTCCTCGAGGTGTGCAAGGCCCGCCTGGTCCGGCCGGGAAGCCCGGAAGACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp GTCCATACCCGTGACACCGGGAGGTCCGGGAGGACCTaGGGGCCCCTTCGGCCCAAGCAGACCACGTGGCCC +
Preference number: 6 (lower is better)
Translates to: VHTRDTGRSGRT*GPLRPKQTTWP
Trigger: GGGCCACGTGGTCTGCTTGGGCCGAAGGGGCCCCCAGGTCCTCCCGGACCTCCCGGTGTCACGGGTATGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp CTTCTTTGTGGCGGCGGCTGTTCTGGAAGGGGCGGCTaGCGCGCTCGCCCACGGGCGGGAGGGCTCGACTTT +
Preference number: 6 (lower is better)
Translates to: LLCGGGCSGRGG*RARPRAGGLDF
Trigger: AAAGTCGAGCCCTCCCGCCCGTGGGCGAGCGCGCCAGCCGCCCCTTCCAGAACAGCCGCCGCCACAAAGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp AGGGTCCCCGACTTGGCCAGTGGGACCCATGGTTCCTaGAGGTCCGGGAAGACCCGCGGGGCCTTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: RVPDLASGTHGS*RSGKTRGAFWA
Trigger: GGCCCAGAAGGCCCCGCGGGTCTTCCCGGACCTCCAGGAACCATGGGTCCCACTGGCCAAGTCGGGGACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp GGGTCCATTGGGTCCCCGTTCACCAGGAGGGCCAGCTaGGCCGTCACCTCCGGAGTTGCCCTTGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: GSIGSPFTRRAS*AVTSGVALGAR
Trigger: CCTGGCCCCAAGGGCAACTCCGGAGGTGACGGCCCAGCTGGCCCTCCTGGTGAACGGGGACCCAATGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp GCGCCTGGGACTCCTGGGCTGAGACCATGGGGCCTTTaGAGCCCGCATCGCCGCCACCTCCAAACCGGAAGG +
Preference number: 6 (lower is better)
Translates to: APGTPGLRPWGL*SPHRRHLQTGR
Trigger: CCTTCCGGTTTGGAGGTGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp AAGCTGGGGCGACGTGGCCACAAGCCAAGGAGTGTCTaGGGCCACCCGGGGCTGGAAGCGGCAGGCAGAGTC +
Preference number: 6 (lower is better)
Translates to: KLGRRGHKPRSV*GHPGLEAAGRV
Trigger: GACTCTGCCTGCCGCTTCCAGCCCCGGGTGGCCCCAGACACTCCTTGGCTTGTGGCCACGTCGCCCCAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS TCA 72 bp CTGCTGGAGAATGGCTTGCGCCTGGGACTCCTGGGCTaGGACCATGGGGCCTTTGGAGCCCGCATCGCCGCC +
Preference number: 6 (lower is better)
Translates to: LLENGLRLGLLG*DHGAFGARIAA
Trigger: GGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 72 bp CGTTGGAGCCCAGGAAGCGGAGGGCCTTGTCGTAGCTaGCCGTGGCTGCGTCCTGCCAGGCCACTGACTGGT +
Preference number: 6 (lower is better)
Translates to: RWSPGSGGPCRS*PWLRPARPLTG
Trigger: ACCAGTCAGTGGCCTGGCAGGACGCAGCCACGGGCAGCTACGACAAGGCCCTCCGCTTCCTGGGCTCCAACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000371820.3
ENST00000618395.4
CDS GCA 72 bp CAGCTGGCTGGCGTCGATGTTCCGCCGCGTCCTGGATaGCTGGATTGGCAGGGGCTGGATGACCTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: QLAGVDVPPRPG*LDWQGLDDLSR
Trigger: CCGGGAGAGGTCATCCAGCCCCTGCCAATCCAGGCATCCAGGACGCGGCGGAACATCGACGCCAGCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000460264.5
ENST00000618395.4
CDS GCA 72 bp TGGGGCCTGGGCCTTCCCAGGGGCGAGGGAACACGCTaGAGTCCCAGGGCTATCGGCGAACTCCACGCTTTC +
Preference number: 6 (lower is better)
Translates to: WGLGLPRGEGTR*SPRAIGELHAF
Trigger: GAAAGCGTGGAGTTCGCCGATAGCCCTGGGACTGCAGCGTGTTCCCTCGCCCCTGGGAAGGCCCAGGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465877.1
CDS GCA 72 bp AGAGCGGTGTGGCACACATGGCAGCGATGGGTGCCATaGAGAGCCGCGAGCCAGCCGTGCCGCAAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: RAVWHTWQRWVP*RAASQPCRKQA
Trigger: TGCCTGCTTGCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS GCA 72 bp TGGCAAGAGCGGTGTGGCACACATGGCAGCGATGGGTaGCATGCAGAGCCGCGAGCCAGCCGTGCCGCAAGC +
Preference number: 6 (lower is better)
Translates to: WQERCGTHGSDG*HAEPRASRAAS
Trigger: GCTTGCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CCA 72 bp GTCGTCACCCCTTTCTCCATCGTCTCCCGGAGGTCCTaGTGGGCCGGAAGGACCAGGGTCACCCCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: VVTPFSIVSRRS*WAGRTRVTPVA
Trigger: GGCCACAGGGGTGACCCTGGTCCTTCCGGCCCACCAGGACCTCCGGGAGACGATGGAGAAAGGGGTGACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp TCTCCCTGGAATTCCGATGGGCCCAGCGGCTCCAGCTaGACCTCTCTCCCCTGGAGATCCCGCAGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SPWNSDGPSGSS*TSLPWRSRRAW
Trigger: CCAGGCCCTGCGGGATCTCCAGGGGAGAGAGGTCCAGCTGGAGCCGCTGGGCCCATCGGAATTCCAGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp AGGCCCCTGGAGACCGTCTCGGCCAGCTGGGCCTTGTaGGCCTTTCTCGCCAGGAGCCCCTTTCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RPLETVSASWAL*AFLARSPFLSC
Trigger: GCAGGAGAGAAAGGGGCTCCTGGCGAGAAAGGCCCACAAGGCCCAGCTGGCCGAGACGGTCTCCAGGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp GGTTTGGCAAGAGCGGTGTGGCACACATGGCAGCGATaGGTGCCATGCAGAGCCGCGAGCCAGCCGTGCCGC +
Preference number: 6 (lower is better)
Translates to: GLARAVWHTWQR*VPCRAASQPCR
Trigger: GCGGCACGGCTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CAA 72 bp TGCGCCTGGGACTCCTGGGCTGAGACCATGGGGCCTTaGGAGCCCGCATCGCCGCCACCTCCAAACCGGAAG +
Preference number: 6 (lower is better)
Translates to: CAWDSWAETMGP*EPASPPPPNRK
Trigger: CTTCCGGTTTGGAGGTGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 72 bp GCGGAGCTGGATTGGAGGAGTTGGAGGTGTCGGCGGTaGTGGTGGGAATTTCGGCCCCAGCGCCTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: AELDWRSWRCRR*WWEFRPQRLGL
Trigger: CAGACCCAGGCGCTGGGGCCGAAATTCCCACCAGCACCGCCGACACCTCCAACTCCTCCAATCCAGCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 72 bp CCCCTCAGTGCCAACCTGGCCTGCTGGAGAATGGCTTaGGCCTGGGACTCCTGGGCTGAGACCATGGGGCCT +
Preference number: 6 (lower is better)
Translates to: PLSANLACWRMA*AWDSWAETMGP
Trigger: AGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCAGGCCAGGTTGGCACTGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp TTTCTCCAGGGTCCCCGACTTGGCCAGTGGGACCCATaGTTCCTGGAGGTCCGGGAAGACCCGCGGGGCCTT +
Preference number: 6 (lower is better)
Translates to: FLQGPRLGQWDP*FLEVREDPRGL
Trigger: AAGGCCCCGCGGGTCTTCCCGGACCTCCAGGAACCATGGGTCCCACTGGCCAAGTCGGGGACCCTGGAGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp ACCTCCAAACCGGAAGGGCAGCATGAGCATGGTTCCTaGAGGACCGGGCAGGCCATCGGCCCCAGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: TSKPEGQHEHGS*RTGQAIGPRKA
Trigger: GGCCTTCCTGGGGCCGATGGCCTGCCCGGTCCTCCAGGAACCATGCTCATGCTGCCCTTCCGGTTTGGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp GTCACCCCTTTCTCCATCGTCTCCCGGAGGTCCTGGTaGGCCGGAAGGACCAGGGTCACCCCTGTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: VTPFSIVSRRSW*AGRTRVTPVAL
Trigger: AAGGGCCACAGGGGTGACCCTGGTCCTTCCGGCCCACCAGGACCTCCGGGAGACGATGGAGAAAGGGGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CAA 90 bp AGAATGGCTTGCGCCTGGGACTCCTGGGCTGAGACCATGGGGCCTTaGGAGCCCGCATCGCCGCCACCTCCAAACCGGAAGGGCAGCATG +
Preference number: 6 (lower is better)
Translates to: RMACAWDSWAETMGP*EPASPPPPNRKGSM
Trigger: CATGCTGCCCTTCCGGTTTGGAGGTGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGCAAGCCATTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CAA 90 bp AAGTCCTGGGGACAAGTGGTGCGTGGACTCCACGAGACCAGGTGGTaGCTCGAAGTGACCCAGTGCGCGCAGGTGCAGGGGCCCACGGAC +
Preference number: 6 (lower is better)
Translates to: KSWGQVVRGLHETRW*LEVTQCAQVQGPTD
Trigger: GTCCGTGGGCCCCTGCACCTGCGCGCACTGGGTCACTTCGAGCAACCACCTGGTCTCGTGGAGTCCACGCACCACTTGTCCCCAGGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS TCA 72 bp GTCGTAGCTGCCCGTGGCTGCGTCCTGCCAGGCCACTaGCTGGTAGCAGTGGTAGGTGACGTTCTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: VVAARGCVLPGH*LVAVVGDVLVG
Trigger: GCCCACCAGAACGTCACCTACCACTGCTACCAGTCAGTGGCCTGGCAGGACGCAGCCACGGGCAGCTACGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000371820.3
ENST00000618395.4
CDS GCA 72 bp CTCCACGAGACCAGGTGGTTGCTCGAAGTGACCCAGTaGGCGCAGGTGCAGGGGCCCACGGACCTGTTCACA +
Preference number: 6 (lower is better)
Translates to: LHETRWLLEVTQ*AQVQGPTDLFT
Trigger: TGTGAACAGGTCCGTGGGCCCCTGCACCTGCGCGCACTGGGTCACTTCGAGCAACCACCTGGTCTCGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 72 bp GAGCTGGATTGGAGGAGTTGGAGGTGTCGGCGGTGCTaGTGGGAATTTCGGCCCCAGCGCCTGGGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: ELDWRSWRCRRC*WEFRPQRLGLW
Trigger: CCACAGACCCAGGCGCTGGGGCCGAAATTCCCACCAGCACCGCCGACACCTCCAACTCCTCCAATCCAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp CGTAGTTCTCGCCATTCCCGTCGTCCAGCAGCTGGCTaGCGTCGATGTTCCGCCGCGTCCTGGATGCCTGGA +
Preference number: 6 (lower is better)
Translates to: RSSRHSRRPAAG*RRCSAASWMPG
Trigger: TCCAGGCATCCAGGACGCGGCGGAACATCGACGCCAGCCAGCTGCTGGACGACGGGAATGGCGAGAACTACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000460264.5
ENST00000618395.4
CDS CCA 72 bp CGGGCCAGTTGGACCCGAGGAGCCCTTAGCACCTTTTaGACCAGGCGGACCCTGCAGAGAGAGGAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: RASWTRGALSTF*TRRTLQREEGR
Trigger: TCTGCCCTCCTCTCTCTGCAGGGTCCGCCTGGTCCAAAAGGTGCTAAGGGCTCCTCGGGTCCAACTGGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CAA 72 bp ACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTaGCTCTCGGGAGCCCGGGCTCGGCGGCTCCTAGCC +
Preference number: 6 (lower is better)
Translates to: TLTNEWHAEVTR*LSGARARRLLA
Trigger: GGCTAGGAGCCGCCGAGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CAA 90 bp GTGCACGGGACACTCACGAACGAATGGCATGCTGAGGTCACGAGGTaGCTCTCGGGAGCCCGGGCTCGGCGGCTCCTAGCCCATGAAGCA +
Preference number: 6 (lower is better)
Translates to: VHGTLTNEWHAEVTR*LSGARARRLLAHEA
Trigger: TGCTTCATGGGCTAGGAGCCGCCGAGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCGTGAGTGTCCCGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 72 bp TGCCAGGGTGGGGTCTGGGCTGCCACACAGGTGGCCTaGGACAGCGGAGGTGGATCCTACAGAAAGCACCAG +
Preference number: 6 (lower is better)
Translates to: CQGGVWAATQVA*DSGGGSYRKHQ
Trigger: CTGGTGCTTTCTGTAGGATCCACCTCCGCTGTCTCAGGCCACCTGTGTGGCAGCCCAGACCCCACCCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS GCA 72 bp TTCCCGCTCCGGGCCAGGGTACAGCTGCTTGGTGGGTaGGCTGAGCTGCGCGTCTTTGGTGACTCTGTAAGC +
Preference number: 6 (lower is better)
Translates to: FPLRARVQLLGG*AELRVFGDSVS
Trigger: GCTTACAGAGTCACCAAAGACGCGCAGCTCAGCGCACCCACCAAGCAGCTGTACCCTGGCCCGGAGCGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp CCGGCATTCCCGGCCCGATCTCCGACGGGGAGCTGGTaGGGTCGTAGTAGGGGTCGTAGTAGTTCTCGTCAA +
Preference number: 6 (lower is better)
Translates to: PAFPARSPTGSW*GRSRGRSSSRQ
Trigger: TTGACGAGAACTACTACGACCCCTACTACGACCCCACCAGCTCCCCGTCGGAGATCGGGCCGGGAATGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp CGGGCCCTCGATGAGCATGCCCGGCTCGATAATCGCTaGTTCTCCCTTTTGGCCTTTCTCGCCCCGAGGTCC +
Preference number: 6 (lower is better)
Translates to: RALDEHARLDNR*FSLLAFLAPRS
Trigger: GGACCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGCGATTATCGAGCCGGGCATGCTCATCGAGGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp AGTGCCAACCTGGCCTGCTGGAGAATGGCTTGCGCCTaGGACTCCTGGGCTGAGACCATGGGGCCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: SANLACWRMACA*DSWAETMGPLE
Trigger: CTCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCAGGCCAGGTTGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp TGCACCAGGGTTTCCTATTCCACCTGGGGGACCTTGTaGGCCATCAGCACCTGGAGCTCCGGAGGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: CTRVSYSTWGTL*AISTWSSGGSS
Trigger: CGAGGACCCTCCGGAGCTCCAGGTGCTGATGGCCCACAAGGTCCCCCAGGTGGAATAGGAAACCCTGGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp TGGGGACAAGTGGTGCGTGGACTCCACGAGACCAGGTaGTTGCTCGAAGTGACCCAGTGCGCGCAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: WGQVVRGLHETR*LLEVTQCAQVQ
Trigger: CTGCACCTGCGCGCACTGGGTCACTTCGAGCAACCACCTGGTCTCGTGGAGTCCACGCACCACTTGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 72 bp ATGTGGAGCGGTTTGGCAAGAGCGGTGTGGCACACATaGCAGCGATGGGTGCCATGCAGAGCCGCGAGCCAG +
Preference number: 6 (lower is better)
Translates to: MWSGLARAVWHT*QRWVPCRAASQ
Trigger: CTGGCTCGCGGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACCGCTCCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CAA 72 bp AATGCTGCTTCCCGCTCCGGGCCAGGGTACAGCTGCTaGGTGGGTGCGCTGAGCTGCGCGTCTTTGGTGACT +
Preference number: 6 (lower is better)
Translates to: NAASRSGPGYSC*VGALSCASLVT
Trigger: AGTCACCAAAGACGCGCAGCTCAGCGCACCCACCAAGCAGCTGTACCCTGGCCCGGAGCGGGAAGCAGCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS TCA 72 bp GCTCTCGGGAGCCCGGGCTCGGCGGCTCCTAGCCCATaGAGCAAGCCGGCCCCACTTCAAATCCAAATTTCT +
Preference number: 6 (lower is better)
Translates to: ALGSPGSAAPSP*SKPAPLQIQIS
Trigger: AGAAATTTGGATTTGAAGTGGGGCCGGCTTGCTTCATGGGCTAGGAGCCGCCGAGCCCGGGCTCCCGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 72 bp TGGGCTGGTCGGGGTTCTCCTCCCCCTCGCCATAGGTaGGGTCATCATACGGTGAGGGCGTGTAGTAGTCCT +
Preference number: 6 (lower is better)
Translates to: WAGRGSPPPRHR*GHHTVRACSSP
Trigger: AGGACTACTACACGCCCTCACCGTATGATGACCTCACCTATGGCGAGGGGGAGGAGAACCCCGACCAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 72 bp GGTCGCCCTTCTCACCCTGTTCACCCGGAGGACCGATaGGCCCGATCAGGCCTGGATGACCCTTTTCACCTT +
Preference number: 6 (lower is better)
Translates to: GRPSHPVHPEDR*ARSGLDDPFHL
Trigger: AAGGTGAAAAGGGTCATCCAGGCCTGATCGGGCTCATCGGTCCTCCGGGTGAACAGGGTGAGAAGGGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS TCA 72 bp ACTGAGATGCCCAGAGCTTGGGTGCAGGACCGGCTTTaGTCAGCACCTATCCCGCCCCCTCCATCACAGTCC +
Preference number: 6 (lower is better)
Translates to: TEMPRAWVQDRL*SAPIPPPPSQS
Trigger: GGACTGTGATGGAGGGGGCGGGATAGGTGCTGATCAAAGCCGGTCCTGCACCCAAGCTCTGGGCATCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS TCA 72 bp CCGAGGTGGCCACTTACCAGGGACCCCCGCTTGTACTaGCTATACCAGGTGGAAGGCTGCTCTTTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: PRWPLTRDPRLY*LYQVEGCSLGQ
Trigger: CTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCCTGGTAAGTGGCCACCTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS GCA 72 bp CCTCTGTGGTTTCTTTGGCAGCTTCCACGGGCTTCTTaGTGGGGGTGGGCTCCTTCCCTAGGTCTTCGGGGT +
Preference number: 6 (lower is better)
Translates to: PLWFLWQLPRAS*WGWAPSLGLRG
Trigger: ACCCCGAAGACCTAGGGAAGGAGCCCACCCCCAGCAAGAAGCCCGTGGAAGCTGCCAAAGAAACCACAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 72 bp TGTCCCGCTAGTCATCAGCAACGTTGGAAGAGAACGTaGATGGCACACGGCCTACAGCCTGCGACGAGGCCC +
Preference number: 6 (lower is better)
Translates to: CPASHQQRWKRT*MAHGLQPATRP
Trigger: GGGCCTCGTCGCAGGCTGTAGGCCGTGTGCCATGCACGTTCTCTTCCAACGTTGCTGATGACTAGCGGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463925.1
CDS CCA 72 bp AGTGAACTCCCCCTCCAAGTCATCCGCACCTTCCCCTaGAGGCGGAGCTGGATTGGAGGAGTTGGAGGTGTC +
Preference number: 6 (lower is better)
Translates to: SELPLQVIRTFP*RRSWIGGVGGV
Trigger: GACACCTCCAACTCCTCCAATCCAGCTCCGCCTCCAGGGGAAGGTGCGGATGACTTGGAGGGGGAGTTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp GGAAGAGAGAGGCTGTGTAAAGACGGAGGCAGAAGCTaGGGCGACGTGGCCACAAGCCAAGGAGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: GRERLCKDGGRS*GDVATSQGVSG
Trigger: CCCAGACACTCCTTGGCTTGTGGCCACGTCGCCCCAGCTTCTGCCTCCGTCTTTACACAGCCTCTCTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp CCTTTTCCACGCTGGTGTAGGGAAGTGGCTGAATCATaGCCCCGAGGGATGGGTCCAGGTCGGAACTCCCAG +
Preference number: 6 (lower is better)
Translates to: PFPRWCREVAES*PRGMGPGRNSQ
Trigger: CTGGGAGTTCCGACCTGGACCCATCCCTCGGGGCCATGATTCAGCCACTTCCCTACACCAGCGTGGAAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp TGTCACGTGATGTGGAGCGGTTTGGCAAGAGCGGTGTaGCACACATGGCAGCGATGGGTGCCATGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: CHVMWSGLARAV*HTWQRWVPCRA
Trigger: GGCTCTGCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACCGCTCCACATCACGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS TCA 72 bp CTCCTCCCCCTCGCCATAGGTGAGGTCATCATACGGTaGGGGCGTGTAGTAGTCCTCACTGGGCACGTAGTC +
Preference number: 6 (lower is better)
Translates to: LLPLAIGEVIIR*GRVVVLTGHVV
Trigger: GACTACGTGCCCAGTGAGGACTACTACACGCCCTCACCGTATGATGACCTCACCTATGGCGAGGGGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS GCA 72 bp GGGAAATGCAGACGCAGGGTACAGCTGCTTGGTGGGTaGGCTGAGCTGCGCGTCTTTGGTGACTCTGTAAGC +
Preference number: 6 (lower is better)
Translates to: GKCRRRVQLLGG*AELRVFGDSVS
Trigger: GCTTACAGAGTCACCAAAGACGCGCAGCTCAGCGCACCCACCAAGCAGCTGTACCCTGCGTCTGCATTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp CTGGGCTGCCACACAGGTGGCCTGAGACAGCGGAGGTaGATCCTACAGAAAGCACCAGTGGATGCTAAGGAG +
Preference number: 6 (lower is better)
Translates to: LGCHTGGLRQRR*ILQKAPVDAKE
Trigger: CTCCTTAGCATCCACTGGTGCTTTCTGTAGGATCCACCTCCGCTGTCTCAGGCCACCTGTGTGGCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp GCTCATTACCCAAGAGAGGGATCCGCTGGCAGGAAGTaGGAGTTGGTGAGGGTGACCGTCCCCACAGTCCTA +
Preference number: 6 (lower is better)
Translates to: AHYPREGSAGRK*ELVRVTVPTVL
Trigger: TAGGACTGTGGGGACGGTCACCCTCACCAACTCCCACTTCCTGCCAGCGGATCCCTCTCTTGGGTAATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463925.1
CDS CAA 90 bp ACTCCACACCTAGCTGAGTCTTGCTGTCACGTGATGTGGAGCGGTTaGGCAAGAGCGGTGTGGCACACATGGCAGCGATGGGTGCCATGC +
Preference number: 6 (lower is better)
Translates to: TPHLAESCCHVMWSG*ARAVWHTWQRWVPC
Trigger: GCATGGCACCCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACCGCTCCACATCACGTGACAGCAAGACTCAGCTAGGTGTGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CAA 90 bp GCCCTCGATGAGCATGCCCGGCTCGATAATCGCTGGTTCTCCCTTTaGGCCTTTCTCGCCCCGAGGTCCTCCAATCCCTTCATAGATGGT +
Preference number: 6 (lower is better)
Translates to: ALDEHARLDNRWFSL*AFLAPRSSNPFIDG
Trigger: ACCATCTATGAAGGGATTGGAGGACCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGCGATTATCGAGCCGGGCATGCTCATCGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CAA 90 bp CCAGCTCATTACCCAAGAGAGGGATCCGCTGGCAGGAAGTGGGAGTaGGTGAGGGTGACCGTCCCCACAGTCCTAATGGATTTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: PAHYPREGSAGRKWE*VRVTVPTVLMDFSQ
Trigger: CTGGCTGAAATCCATTAGGACTGTGGGGACGGTCACCCTCACCAACTCCCACTTCCTGCCAGCGGATCCCTCTCTTGGGTAATGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463925.1
CDS TCA 72 bp GAACCTTACGGGCAAACCAGGGACCCCCGCTTGTACTaGCTATACCAGGTGGAAGGCTGCTCTTTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: EPYGQTRDPRLY*LYQVEGCSLGQ
Trigger: CTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCCTGGTTTGCCCGTAAGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465877.1
CDS GCA 72 bp CCAAGGGGATTCTTCACAAGTCCTGGGGACAAGTGGTaGGTGGACTCCACGAGACCAGGTGGTTGCTCGAAG +
Preference number: 6 (lower is better)
Translates to: PRGFFTSPGDKW*VDSTRPGGCSK
Trigger: CTTCGAGCAACCACCTGGTCTCGTGGAGTCCACGCACCACTTGTCCCCAGGACTTGTGAAGAATCCCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 72 bp AGAGCAGGGACCCCCGCTTGTACTGACTATACCAGGTaGAAGGCTGCTCTTTGGGCCAGCGGGCCATTTTAC +
Preference number: 6 (lower is better)
Translates to: RAGTPACTDYTR*KAALWASGPFY
Trigger: GTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371820.3
ENST00000618395.4
CDS CCA 72 bp CCTCGCCGTCTCCTTCCGTGTAATATTCATCTGGATTaGGGTCCTGCGACTGTGGGGTGTCAGGTACTGCGG +
Preference number: 6 (lower is better)
Translates to: PRRLLPCNIHLD*GPATVGCQVLR
Trigger: CCGCAGTACCTGACACCCCACAGTCGCAGGACCCCAATCCAGATGAATATTACACGGAAGGAGACGGCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp TTTCTTTGGCAGCTTCCACGGGCTTCTTGCTGGGGGTaGGCTCCTTCCCTAGGTCTTCGGGGTCTTCGTAGT +
Preference number: 6 (lower is better)
Translates to: FLWQLPRASCWG*APSLGLRGLRS
Trigger: ACTACGAAGACCCCGAAGACCTAGGGAAGGAGCCCACCCCCAGCAAGAAGCCCGTGGAAGCTGCCAAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp GGTCATCATACGGTGAGGGCGTGTAGTAGTCCTCACTaGGCACGTAGTCATAGTCCCCGATGCCGACGTCCT +
Preference number: 6 (lower is better)
Translates to: GHHTVRACSSPH*ARSHSPRCRRP
Trigger: AGGACGTCGGCATCGGGGACTATGACTACGTGCCCAGTGAGGACTACTACACGCCCTCACCGTATGATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp AGCATGCCCGGCTCGATAATCGCTGGTTCTCCCTTTTaGCCTTTCTCGCCCCGAGGTCCTCCAATCCCTTCA +
Preference number: 6 (lower is better)
Translates to: SMPGSIIAGSPF*PFSPRGPPIPS
Trigger: TGAAGGGATTGGAGGACCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGCGATTATCGAGCCGGGCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CCA 72 bp GTCCTCACCGGCTCGATAATCGCTGGTTCTCCCTTTTaGCCTTTCTCGCCCCGAGGTCCTCCAATCCCTTCA +
Preference number: 6 (lower is better)
Translates to: VLTGSIIAGSPF*PFSPRGPPIPS
Trigger: TGAAGGGATTGGAGGACCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGCGATTATCGAGCCGGTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 72 bp TACCCAAGGGGATTCTTCACAAGTCCTGGGGACAAGTaGTGCGTGGACTCCACGAGACCAGGTGGTTGCTCG +
Preference number: 6 (lower is better)
Translates to: YPRGFFTSPGDK*CVDSTRPGGCS
Trigger: CGAGCAACCACCTGGTCTCGTGGAGTCCACGCACCACTTGTCCCCAGGACTTGTGAAGAATCCCCTTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 72 bp CAGGTGCCGCCCCACGACTGGGTGACAGGGACAACTTaGATGCTGTATCTTAGAGCTAATGCTGCTTCCCGC +
Preference number: 6 (lower is better)
Translates to: QVPPHDWVTGTT*MLYLRANAASR
Trigger: GCGGGAAGCAGCATTAGCTCTAAGATACAGCATCCAAGTTGTCCCTGTCACCCAGTCGTGGGGCGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp CGCCCACACCTCGATCTTGGAATTCTGGCCCAGAGCTaGGAGAGGATAAATCTCTGCTGTTTGCCACCGGGC +
Preference number: 6 (lower is better)
Translates to: RPHLDLGILAQS*ERINLCCLPPG
Trigger: GCCCGGTGGCAAACAGCAGAGATTTATCCTCTCCCAGCTCTGGGCCAGAATTCCAAGATCGAGGTGTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp TTCAGAGGGAGCACGGCCCCGCCCACACCTCGATCTTaGAATTCTGGCCCAGAGCTGGGAGAGGATAAATCT +
Preference number: 6 (lower is better)
Translates to: FRGSTAPPTPRS*NSGPELGEDKS
Trigger: AGATTTATCCTCTCCCAGCTCTGGGCCAGAATTCCAAGATCGAGGTGTGGGCGGGGCCGTGCTCCCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CAA 72 bp TCATCCAGGATCCGGGTGCCAAACACGATGATGCCATaGATGTCGATCATGGGGTGGTCGCTGCGGTCGAGG +
Preference number: 6 (lower is better)
Translates to: SSRIRVPNTMMP*MSIMGWSLRSR
Trigger: CCTCGACCGCAGCGACCACCCCATGATCGACATCAATGGCATCATCGTGTTTGGCACCCGGATCCTGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000464187.1
ENST00000618395.4
CDS CAA 72 bp CTGGCCCAGAGCTGGGAGAGGATAAATCTCTGCTGTTaGCCACCGGGCTGTGACAGTTGGTTGCAGCAGTCC +
Preference number: 6 (lower is better)
Translates to: LAQSWERINLCC*PPGCDSWLQQS
Trigger: GGACTGCTGCAACCAACTGTCACAGCCCGGTGGCAAACAGCAGAGATTTATCCTCTCCCAGCTCTGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CAA 72 bp TACCCAAGAGAGGGATCCGCTGGCAGGAAGTGGGAGTaGGTGAGGGTGACCGTCCCCACAGTCCTAATGGAT +
Preference number: 6 (lower is better)
Translates to: YPREGSAGRKWE*VRVTVPTVLMD
Trigger: ATCCATTAGGACTGTGGGGACGGTCACCCTCACCAACTCCCACTTCCTGCCAGCGGATCCCTCTCTTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463925.1
CDS CAA 72 bp CTAGCTGAGTCTTGCTGTCACGTGATGTGGAGCGGTTaGGCAAGAGCGGTGTGGCACACATGGCAGCGATGG +
Preference number: 6 (lower is better)
Translates to: LAESCCHVMWSG*ARAVWHTWQRW
Trigger: CCATCGCTGCCATGTGTGCCACACCGCTCTTGCCAAACCGCTCCACATCACGTGACAGCAAGACTCAGCTAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS TCA 72 bp CTTCAGGAGATCTGCTGGCTGAGCGAAGAACGCAGCTaGTGTCAGGGACTGGCTTCAAAATCACCGGGTGCG +
Preference number: 6 (lower is better)
Translates to: LQEICWLSEERS*CQGLASKSPGA
Trigger: CGCACCCGGTGATTTTGAAGCCAGTCCCTGACATCAGCTGCGTTCTTCGCTCAGCCAGCAGATCTCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS GCA 72 bp AAAGGGGACTCCGCCTCCGCCTCGATAGCTCTGAGCTaGTTTTCATCCCAGGTGAAACTGACCAGCACTGAG +
Preference number: 6 (lower is better)
Translates to: KGDSASASIALS*FSSQVKLTSTE
Trigger: CTCAGTGCTGGTCAGTTTCACCTGGGATGAAAAGCAGCTCAGAGCTATCGAGGCGGAGGCGGAGTCCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS GCA 72 bp CAGTTGGTTGCAGCAGTCCCAGGAGATCATGCAGAGTaGAATGTCCTTGTCCCTTCCAGGGGCAAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: QLVAAVPGDHAE*NVLVPSRGKRR
Trigger: CCTCCTCTTGCCCCTGGAAGGGACAAGGACATTGCACTCTGCATGATCTCCTGGGACTGCTGCAACCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp AAACCAGGGACCCCCGCTTGTACTGACTATACCAGGTaGAAGGCTGCTCTTTGGGCCAGCGGGCCATTTTAC +
Preference number: 6 (lower is better)
Translates to: KPGTPACTDYTR*KAALWASGPFY
Trigger: GTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCCTGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465877.1
CDS CCA 72 bp TTACCAGGGACCCCCGCTTGTACTGACTATACCAGGTaGAAGGCTGCTCTTTGGGCCAGCGGGCCATTTTAC +
Preference number: 6 (lower is better)
Translates to: LPGTPACTDYTR*KAALWASGPFY
Trigger: GTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGCGGGGGTCCCTGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CCA 72 bp ACTCCACACCTAGCTGAGTCTTGCTGTCACGTGATGTaGAGCGGTTTGGCAAGAGCGGTGTGGCACACATGG +
Preference number: 6 (lower is better)
Translates to: TPHLAESCCHVM*SGLARAVWHTW
Trigger: CCATGTGTGCCACACCGCTCTTGCCAAACCGCTCCACATCACGTGACAGCAAGACTCAGCTAGGTGTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460264.5
CDS CAA 90 bp AACACCTCCTCATCCAGGATCCGGGTGCCAAACACGATGATGCCATaGATGTCGATCATGGGGTGGTCGCTGCGGTCGAGGAATTTGGTG +
Preference number: 6 (lower is better)
Translates to: NTSSSRIRVPNTMMP*MSIMGWSLRSRNLV
Trigger: CACCAAATTCCTCGACCGCAGCGACCACCCCATGATCGACATCAATGGCATCATCGTGTTTGGCACCCGGATCCTGGATGAGGAGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000464187.1
ENST00000618395.4
CDS CAA 90 bp AGTTGGTTGCAGCAGTCCCAGGAGATCATGCAGAGTGCAATGTCCTaGTCCCTTCCAGGGGCAAGAGGAGGTCTCAGCAAAGCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: SWLQQSQEIMQSAMS*SLPGARGGLSKAGR
Trigger: TCTGCCTGCTTTGCTGAGACCTCCTCTTGCCCCTGGAAGGGACAAGGACATTGCACTCTGCATGATCTCCTGGGACTGCTGCAACCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS GCA 72 bp TGGTCCCTGTGGCCCCAGGCAGAACACGACCTTTGCTaGGCTGTGTCTGAGCCTTCCCATAATAAGAACATC +
Preference number: 6 (lower is better)
Translates to: WSLWPQAEHDLC*AVSEPSHNKNI
Trigger: GATGTTCTTATTATGGGAAGGCTCAGACACAGCGCAGCAAAGGTCGTGTTCTGCCTGGGGCCACAGGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS GCA 72 bp GGAATTCTGGCCCAGAGCTGGGAGAGGATAAATCTCTaGTGTTTGCCACCGGGCTGTGACAGTTGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: GILAQSWERINL*CLPPGCDSWLQ
Trigger: CTGCAACCAACTGTCACAGCCCGGTGGCAAACAGCAGAGATTTATCCTCTCCCAGCTCTGGGCCAGAATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp CGTGTAATATTCATCTGGATTGGGGTCCTGCGACTGTaGGGTGTCAGGTACTGCGGTGTCACAGTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RVIFIWIGVLRL*GVRYCGVTVRA
Trigger: AGCCCTGACTGTGACACCGCAGTACCTGACACCCCACAGTCGCAGGACCCCAATCCAGATGAATATTACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CAA 72 bp GGCCGTTTCATCTGCTCAATCTCCAGCTTCAGAGAGTaGAGAGAGCCGAAGATCTCTTCCATGCCGTCCGCG +
Preference number: 6 (lower is better)
Translates to: GRFICSISSFRE*REPKISSMPSA
Trigger: CGCGGACGGCATGGAAGAGATCTTCGGCTCTCTCAACTCTCTGAAGCTGGAGATTGAGCAGATGAAACGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371817.8
ENST00000371820.3
ENST00000460264.5
ENST00000618395.4
CDS CAA 90 bp GACAACCGCAAAGACGCCAGAGGCCACCTTACCAGTTTCCCACGCTaGAATTCACTGAACCAGGAGCCCGGGTTTTCTTTGGGCCAAGAA +
Preference number: 6 (lower is better)
Translates to: DNRKDARGHLTSFPR*NSLNQEPGFSLGQE
Trigger: TTCTTGGCCCAAAGAAAACCCGGGCTCCTGGTTCAGTGAATTCAAGCGTGGGAAACTGGTAAGGTGGCCTCTGGCGTCTTTGCGGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460264.5
ENST00000465877.1
CDS TCA 72 bp GCCGTTTCATCTGCTCAATCTCCAGCTTCAGAGAGTTaGGAGAGCCGAAGATCTCTTCCATGCCGTCCGCGT +
Preference number: 6 (lower is better)
Translates to: AVSSAQSPASES*ESRRSLPCRPR
Trigger: ACGCGGACGGCATGGAAGAGATCTTCGGCTCTCTCAACTCTCTGAAGCTGGAGATTGAGCAGATGAAACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371817.8
ENST00000371820.3
ENST00000460264.5
ENST00000618395.4
CDS TCA 72 bp GGAGAGGATAAATCTCTGCTGTTTGCCACCGGGCTGTaGCAGTTGGTTGCAGCAGTCCCAGGAGATCATGCA +
Preference number: 6 (lower is better)
Translates to: GEDKSLLFATGL*QLVAAVPGDHA
Trigger: TGCATGATCTCCTGGGACTGCTGCAACCAACTGTCACAGCCCGGTGGCAAACAGCAGAGATTTATCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp GCTTGTACTGACTATACCAGGTGGAAGGCTGCTCTTTaGGCCAGCGGGCCATTTTACTCCCTTCGGACTTCT +
Preference number: 6 (lower is better)
Translates to: ACTDYTRWKAAL*ASGPFYSLRTS
Trigger: AGAAGTCCGAAGGGAGTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371820.3
ENST00000618395.4
CDS CAA 72 bp CGCTTGAATTCACTGAACCAGGAGCCCGGGTTTTCTTaGGGCCAAGAAGTGATTCTGGCCCCTTCGGACTTC +
Preference number: 6 (lower is better)
Translates to: RLNSLNQEPGFS*GQEVILAPSDF
Trigger: GAAGTCCGAAGGGGCCAGAATCACTTCTTGGCCCAAAGAAAACCCGGGCTCCTGGTTCAGTGAATTCAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000460264.5
ENST00000465877.1
CDS CAA 72 bp AATCTCTGCTGTTTGCCACCGGGCTGTGACAGTTGGTaGCAGCAGTCCCAGGAGATCATGCAGAGTGCAATG +
Preference number: 6 (lower is better)
Translates to: NLCCLPPGCDSW*QQSQEIMQSAM
Trigger: CATTGCACTCTGCATGATCTCCTGGGACTGCTGCAACCAACTGTCACAGCCCGGTGGCAAACAGCAGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CAA 90 bp AGTTTCCCACGCTTGAATTCACTGAACCAGGAGCCCGGGTTTTCTTaGGGCCAAGAAGTGATTCTGGCCCCTTCGGACTTCTTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: SFPRLNSLNQEPGFS*GQEVILAPSDFLSG
Trigger: CCCTGACAAGAAGTCCGAAGGGGCCAGAATCACTTCTTGGCCCAAAGAAAACCCGGGCTCCTGGTTCAGTGAATTCAAGCGTGGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000460264.5
ENST00000465877.1
CDS CAA 90 bp GAGAGGATAAATCTCTGCTGTTTGCCACCGGGCTGTGACAGTTGGTaGCAGCAGTCCCAGGAGATCATGCAGAGTGCAATGTCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: ERINLCCLPPGCDSW*QQSQEIMQSAMSLS
Trigger: GGACAAGGACATTGCACTCTGCATGATCTCCTGGGACTGCTGCAACCAACTGTCACAGCCCGGTGGCAAACAGCAGAGATTTATCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp TGTAAGCGACATCCGGGCCTTTGGAAGATCGCCGCGTaGCGCAAAAGCCTGTTGTCTTTGTTATTCCATCAG +
Preference number: 6 (lower is better)
Translates to: CKRHPGLWKIAA*RKSLLSLLFHQ
Trigger: CTGATGGAATAACAAAGACAACAGGCTTTTGCGCCACGCGGCGATCTTCCAAAGGCCCGGATGTCGCTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000464187.1
ENST00000618395.4
CDS CCA 72 bp ATAAATCTCTGCTGTTTGCCACCGGGCTGTGACAGTTaGTTGCAGCAGTCCCAGGAGATCATGCAGAGTGCA +
Preference number: 6 (lower is better)
Translates to: INLCCLPPGCDS*LQQSQEIMQSA
Trigger: TGCACTCTGCATGATCTCCTGGGACTGCTGCAACCAACTGTCACAGCCCGGTGGCAAACAGCAGAGATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CCA 72 bp ATTTTCACAGCATGTCCCGCTAGTCATCAGCAACGTTaGAAGAGAACGTGCATGGCACACGGCCTACAGCCT +
Preference number: 6 (lower is better)
Translates to: IFTACPASHQQR*KRTCMAHGLQP
Trigger: AGGCTGTAGGCCGTGTGCCATGCACGTTCTCTTCCAACGTTGCTGATGACTAGCGGGACATGCTGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463925.1
CDS CAA 72 bp AAAGACGCCAGAGGCCACCTTACCAGTTTCCCACGCTaGAATTCACTGAACCAGGAGCCCGGGTTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: KDARGHLTSFPR*NSLNQEPGFSL
Trigger: CAAAGAAAACCCGGGCTCCTGGTTCAGTGAATTCAAGCGTGGGAAACTGGTAAGGTGGCCTCTGGCGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460264.5
ENST00000465877.1
CDS CAA 90 bp ATGAGAAAATGTCCTCACCGGCTCGATAATCGCTGGTTCTCCCTTTaGGCCTTTCTCGCCCCGAGGTCCTCCAATCCCTTCATAGATGGT +
Preference number: 6 (lower is better)
Translates to: MRKCPHRLDNRWFSL*AFLAPRSSNPFIDG
Trigger: ACCATCTATGAAGGGATTGGAGGACCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGCGATTATCGAGCCGGTGAGGACATTTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS TCA 72 bp TTAATTAACTGTGGCAGGTGCCGCCCCACGACTGGGTaGCAGGGACAACTTGGATGCTGTATCTTAGAGCTA +
Preference number: 6 (lower is better)
Translates to: LINCGRCRPTTG*QGQLGCCILEL
Trigger: TAGCTCTAAGATACAGCATCCAAGTTGTCCCTGTCACCCAGTCGTGGGGCGGCACCTGCCACAGTTAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS GCA 72 bp GAGAGGTACGACCACGTGTTAACTATTCCCTACCACTaGCGCGCGCATCTTTTACACGGAATGGGCCATTTA +
Preference number: 6 (lower is better)
Translates to: ERYDHVLTIPYH*RAHLLHGMGHL
Trigger: TAAATGGCCCATTCCGTGTAAAAGATGCGCGCGGCAGTGGTAGGGAATAGTTAACACGTGGTCGTACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CCA 72 bp CCAAACACGATGATGCCATTGATGTCGATCATGGGGTaGTCGCTGCGGTCGAGGAATTTGGTGGTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: PNTMMPLMSIMG*SLRSRNLVVFF
Trigger: AAAGAAGACCACCAAATTCCTCGACCGCAGCGACCACCCCATGATCGACATCAATGGCATCATCGTGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000464187.1
ENST00000618395.4
CDS CCA 72 bp GCTTGTACTGACTATACCAGGTGGAAGGCTGCTCTTTaGGCCAGCGGGCCATTTTACTCTGTAAGATACGAG +
Preference number: 6 (lower is better)
Translates to: ACTDYTRWKAAL*ASGPFYSVRYE
Trigger: CTCGTATCTTACAGAGTAAAATGGCCCGCTGGCCCAAAGAGCAGCCTTCCACCTGGTATAGTCAGTACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460264.5
ENST00000465877.1
CDS CCA 72 bp AAAGAGGAGCTCATTTTAGTCCAGGCCATGAGCAAGTaGCTGGGTCAAGGCGATGAGGTTCTCCATCAACAG +
Preference number: 6 (lower is better)
Translates to: KEELILVQAMSK*LGQGDEVLHQQ
Trigger: CTGTTGATGGAGAACCTCATCGCCTTGACCCAGCCACTTGCTCATGGCCTGGACTAAAATGAGCTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS CAA 72 bp ATGTCGATCATGGGGTGGTCGCTGCGGTCGAGGAATTaGGTGGTCTTCTTTTTACAGTCGAGGATCAAGGTG +
Preference number: 6 (lower is better)
Translates to: MSIMGWSLRSRN*VVFFLQSRIKV
Trigger: CACCTTGATCCTCGACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAGCGACCACCCCATGATCGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000464187.1
ENST00000618395.4
CDS CAA 90 bp TTGGTGGTCTTCTTTTTACAGTCGAGGATCAAGGTGACATTTTTCTaGTGGACGCTGAGAGCAATTCTGTGCCACTTGCCATCTGACAGG +
Preference number: 6 (lower is better)
Translates to: LVVFFLQSRIKVTFF*WTLRAILCHLPSDR
Trigger: CCTGTCAGATGGCAAGTGGCACAGAATTGCTCTCAGCGTCCACAAGAAAAATGTCACCTTGATCCTCGACTGTAAAAAGAAGACCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000464187.1
ENST00000618395.4
CDS CAA 72 bp TCAAATCCAAATTTCTGTGACGCTTCACCGAAGTCATaGAACATGATGTCCACGATGGGCACCTGCTCCACT +
Preference number: 6 (lower is better)
Translates to: SNPNFCDASPKS*NMMSTMGTCST
Trigger: AGTGGAGCAGGTGCCCATCGTGGACATCATGTTCAATGACTTCGGTGAAGCGTCACAGAAATTTGGATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371817.8
ENST00000618395.4
CDS CAA 72 bp GGTCGGAACTCCCAGAATCTAGATCCACAGGTGACCTaGTCCAGAAATAAGATCACTGCAGATGGAATGAAG +
Preference number: 6 (lower is better)
Translates to: GRNSQNLDPQVT*SRNKITADGMK
Trigger: CTTCATTCCATCTGCAGTGATCTTATTTCTGGACAAGGTCACCTGTGGATCTAGATTCTGGGAGTTCCGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464187.1
CDS GCA 72 bp TGTTTCAACAGCTTCTGTAAACTTACTCCAAACGGTTaGATAACAGACGCAGAGAGGTACGACCACGTGTTA +
Preference number: 6 (lower is better)
Translates to: CFNSFCKLTPNG*ITDAERYDHVL
Trigger: TAACACGTGGTCGTACCTCTCTGCGTCTGTTATGCAACCGTTTGGAGTAAGTTTACAGAAGCTGTTGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469093.1
CDS CAA 72 bp TTCTTTTTACAGTCGAGGATCAAGGTGACATTTTTCTaGTGGACGCTGAGAGCAATTCTGTGCCACTTGCCA +
Preference number: 6 (lower is better)
Translates to: FFLQSRIKVTFF*WTLRAILCHLP
Trigger: TGGCAAGTGGCACAGAATTGCTCTCAGCGTCCACAAGAAAAATGTCACCTTGATCCTCGACTGTAAAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371817.8
ENST00000464187.1
ENST00000618395.4