RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL4A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000169031

Ensembl transcript IDs: ENST00000304990.8, ENST00000396578.8, ENST00000468753.5, ENST00000469504.2, ENST00000471862.2, ENST00000487633.1, ENST00000643388.1, ENST00000682257.1, ENST00000683077.1, ENST00000684413.1, ENST00000684724.1

Found 453 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTaGAAATCCAGTTCTATACACAATGCTCCAGGATACCACATGCCC +
Preference number: 1 (lower is better)
Translates to: SSVLCSIRPYGPQQV*KSSSIHNAPGYHMP
Trigger: GGGCATGTGGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR CCA 90 bp ACCTTAGAGTCACCTGTGAGTTTGAACTTTAAAAAGAGGCACGGATaGAGCAGTTGTAGCCAGCCGTACTTGGTAACTGCCTGCGGAGTT +
Preference number: 1 (lower is better)
Translates to: TLESPVSLNFKKRHG*SSCSQPYLVTACGV
Trigger: AACTCCGCAGGCAGTTACCAAGTACGGCTGGCTACAACTGCTCCATCCGTGCCTCTTTTTAAAGTTCAAACTCACAGGTGACTCTAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR TCA 90 bp CACCGTAGTGACAGTGCCTTGGATGTAAGTGGAATAGGTTTTTGGTaGTATTTTGTGAATAGTTGCTGCTTTGCCACAGAGAACTTTGAA +
Preference number: 1 (lower is better)
Translates to: HRSDSALDVSGIGFW*YFVNSCCFATENFE
Trigger: TTCAAAGTTCTCTGTGGCAAAGCAGCAACTATTCACAAAATATCACCAAAAACCTATTCCACTTACATCCAAGGCACTGTCACTACGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR GCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAACTCCAGGATACCACATaGCCCCTTCTCTTCCCCTAC +
Preference number: 2 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSELQDTT*PLLFPY
Trigger: GTAGGGGAAGAGAAGGGGGCATGTGGTATCCTGGAG...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR GCA 90 bp TGCACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCACCAGTGCTTGCCCGGTaGCCTCAGAACCTGCACTTG +
Preference number: 2 (lower is better)
Translates to: CTFLFHDILEMGWLGILPPVLAR*PQNLHL
Trigger: CAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACTGG...TGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
3UTR-3UTR GCA 90 bp AAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCACGTTCCTCTTCCATGGGGAGGCCAGTGCTTaGCCGGTGCCCTCAGAACCT +
Preference number: 2 (lower is better)
Translates to: KPARNCRNLNSSCTFLFHGEASA*PVPSEP
Trigger: AGGTTCTGAGGGCACCGGGCAAGCACTGGCCTCCCC...ATGGAAGAGGAACGTGCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
3UTR-3UTR TCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACCCCTACCCAGGGTCTaGAGTTTCAGGAAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSPLPRV*SFRKGW
Trigger: CCAACCCTTCCTGAAACTTCAGACCCTGGGTAGGGG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR CCA 90 bp TGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATCCTTTCCCAGCCGTGAGGACATaGAGGAATGTCAGTGGTTTG +
Preference number: 2 (lower is better)
Translates to: CPVPSEPALVNMMNENPFPAVRT*RNVSGL
Trigger: CAAACCACTGACATTCCTCCATGTCCTCACGGCTGG...GAAAGGATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
3UTR-3UTR TCA 90 bp TGCACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCAAGAGAAATCCAGCCGTaGGGACATGGAGGAATGTCA +
Preference number: 2 (lower is better)
Translates to: CTFLFHDILEMGWLGILPREIQP*GHGGMS
Trigger: TGACATTCCTCCATGTCCTCACGGCTGGATTTCTCT...TGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
3UTR-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAGAAAGAAGACAAATGTaGGAATCCAGCGGGCCAAAT +
Preference number: 2 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEERRQM*ESSGPN
Trigger: ATTTGGCCCGCTGGATTCCCACATTTGTCTTCTTTC...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR GCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATTTGTGAATAGTTGCTaGTTTGCCACAGAGAACTTT +
Preference number: 2 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEFVNSC*FATENF
Trigger: AAAGTTCTCTGTGGCAAAGCAGCAACTATTCACAAA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACAGTTCTATACACAATaGTCCAGGATACCACATGCC +
Preference number: 2 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSQFYTQ*SRIPHA
Trigger: GGCATGTGGTATCCTGGAGCATTGTGTATAGAACTG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR TCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACCCAGATCACAGAACTaGCTTGAAAGAATTGCTTTG +
Preference number: 2 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSPRSQN*LERIAL
Trigger: CAAAGCAATTCTTTCAAGTCAGTTCTGTGATCTGGG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR CAA 90 bp ACAGTATTTCCAAGGGTATTATGGTTCCATCAGGGAATCCCCCTTTaGCCGTTAGTAATGGGCATGTTTGAAACAGTCCTGGAAAATCCA +
Preference number: 2 (lower is better)
Translates to: TVFPRVLWFHQGIPL*PLVMGMFETVLENP
Trigger: TGGATTTTCCAGGACTGTTTCAAACATGCCCATTACTAACGGCAAAAGGGGGATTCCCTGATGGAACCATAATACCCTTGGAAATACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR CCA 90 bp AAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGACACTTGGAAAACACTaGAAGAAGATAGCCATCCAC +
Preference number: 2 (lower is better)
Translates to: KMRSVGWALIQCEWCLYKTLGKH*KKIAIH
Trigger: GTGGATGGCTATCTTCTTCCAGTGTTTTCCAAGTGT...CTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
3UTR-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTAGTTTCAGGAAGGGTTaGCGGGGCAATCAAACACTG +
Preference number: 2 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFSFRKG*RGNQTL
Trigger: CAGTGTTTGATTGCCCCGCCAACCCTTCCTGAAACT...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR CCA 90 bp GATGGAATAGGCTTTCTGAACATTCTTTCTGGGTTTAATGAAGCCAGCCAGAAAATTCTAGAAATGGGCTaGCTCGGAATTCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: DGIGFLNILSGFNEASQKILEMG*LGILPG
Trigger: GCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAAT...TTTCTGGCTGGCTTCATTAAACCCAGAAAGAATGTTCAGAAAGCCTATTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
3UTR-3UTR TCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGGGGCAATCAAACACTaGTTTAGCCTCCCTGAGTCT +
Preference number: 2 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSGAIKH*FSLPES
Trigger: AGACTCAGGGAGGCTAAATCAGTGTTTGATTGCCCC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR TCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGGTCCTCAGCAGGTCTaGAAATCCAGTTCTATACAC +
Preference number: 2 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSGPQQV*KSSSIH
Trigger: GTGTATAGAACTGGATTTTCAGACCTGCTGAGGACC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR GCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCCCCTTACATAAGGTATaGACCGACATTTATGGAATG +
Preference number: 2 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFPLHKV*TDIYGM
Trigger: CATTCCATAAATGTCGGTGCATACCTTATGTAAGGG...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR CCA 90 bp TCAATCCAGAAATGGGTTCGAAAAAGAGTCACAGCACAGTGTTGTAGTTTGAATGAAGATTCAGACACTTaGAAAACACTGGAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: SIQKWVRKRVTAQCCSLNEDSDT*KTLEED
Trigger: ATCTTCTTCCAGTGTTTTCCAAGTGTCTGAATCTTC...ATTCAAACTACAACACTGTGCTGTGACTCTTTTTCGAACCCATTTCTGGATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304990.8
3UTR TCA 72 bp CTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTaGAAATCCAGTTCTATACACAATGCTCCAGGATAC +
Preference number: 3 (lower is better)
Translates to: LCSIRPYGPQQV*KSSSIHNAPGY
Trigger: GTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCGTAGTGACAGTGCCTaGGATGTAAGTGGAATAGGT +
Preference number: 3 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTRSDSA*DVSGIG
Trigger: ACCTATTCCACTTACATCCAAGGCACTGTCACTACG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR CAA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAAAGTTTCAGGAAGGGTaGGCGGGGCAATCAAACACT +
Preference number: 3 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSKFQEG*AGQSNT
Trigger: AGTGTTTGATTGCCCCGCCAACCCTTCCTGAAACTT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAACTGACTTGAAAGAATaGCTTTGTTTTGTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSETDLKE*LCFVGK
Trigger: TTTCCCCACAAAACAAAGCAATTCTTTCAAGTCAGT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR GCA 72 bp AAGGATGTAAACCATGTGAGCCATGGCCATAGTCTGTaGTGTCCTCTGGGTCATGTTTTTCACTTACAAAGC +
Preference number: 3 (lower is better)
Translates to: KDVNHVSHGHSL*CPLGHVFHLQS
Trigger: GCTTTGTAAGTGAAAAACATGACCCAGAGGACAGCACAGACTATGGCCATGGCTCACATGGTTTACATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR CAA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTCAGGGAATCCCCCTTTaGCCGTTAGTAATGGGCATG +
Preference number: 3 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFQGIPL*PLVMGM
Trigger: CATGCCCATTACTAACGGCAAAAGGGGGATTCCCTG...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR TCA 72 bp GGGTTCGAAAAAGAGTCACAGCACAGTGTTGTAGTTTaGATTGTGTTGTCCCCAAATTCATATGCTGAAGTC +
Preference number: 3 (lower is better)
Translates to: GFEKESQHSVVV*IVLSPNSYAEV
Trigger: GACTTCAGCATATGAATTTGGGGACAACACAATTCAAACTACAACACTGTGCTGTGACTCTTTTTCGAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304990.8
3UTR GCA 72 bp AATGTGGGAATCCAGCGGGCCAAATATTTCATAACTTaGAGCATTCAAACTTCATACAATCACCGTAGTGAC +
Preference number: 3 (lower is better)
Translates to: NVGIQRAKYFIT*SIQTSYNHRSD
Trigger: GTCACTACGGTGATTGTATGAAGTTTGAATGCTGCAAGTTATGAAATATTTGGCCCGCTGGATTCCCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR-3UTR CAA 90 bp CCAAATTCATATGCTGAAGTCCTAACCTTCAGTACTTCGGAACATGACTCTGTAAGAAGATTCAGACACTaGGAAAACACTGGAAGAAGA +
Preference number: 3 (lower is better)
Translates to: PNSYAEVLTFSTSEHDSVRRFRH*ENTGRR
Trigger: TCTTCTTCCAGTGTTTTCCAAGTGTCTGAATCTTCT...TACAGAGTCATGTTCCGAAGTACTGAAGGTTAGGACTTCAGCATATGAATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
3UTR-3UTR CAA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTTGCCACAGAGAACTTaGAAACAGCACAGATTAGAG +
Preference number: 3 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFLPQRT*KQHRLE
Trigger: CTCTAATCTGTGCTGTTTCAAAGTTCTCTGTGGCAA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GGAGGCCAGTGCTTGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAAGGCCCAGGTTCTCCCTaGATCCCTGGTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGQCLPGALRTCTCEHDEGPGSP*IPGSPG
Trigger: ACCTGGAGAACCAGGGATGCAGGGAGAACCTGGGCC...TTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACTGGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATACAGACACAACCCTTaGTGGCTGCGGGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEYRHNP*WLRAPP
Trigger: CGGCGGCGCCCGCAGCCAGCAAGGGTTGTGTCTGTA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAGCACCCGGGATCCCTaGGTAGCCCAGTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSESTRDP*VAQCPW
Trigger: CCAGGGACACTGGGCTACCCAGGGATCCCGGGTGCT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCGCCGGCTTCTCCGGGTaGTCCGGGGGCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTAGFSG*SGGSRN
Trigger: GTTCCTGGAGCCCCCGGACCACCCGGAGAAGCCGGC...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGAGGCCAGTGCTTGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAAGGCTGTGAACGGCTATaGCGATCGCAGGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: GGQCLPGALRTCTCEHDEGCERL*RSQDLH
Trigger: GTGAAGGTCCTGCGATCGCCATAGCCGTTCACAGCC...TTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACTGGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp TGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATCCTTTCGCCAGGGGAGGCCAGTaGTTGCCCGGTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: CPVPSEPALVNMMNENPFARGGQ*LPGALR
Trigger: TCTGAGGGCACCGGGCAAGCACTGGCCTCCCCTGGC...GAAAGGATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAGTCCTGGAAAGCCCTTaGGTCCCTGCGGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEVLESP*VPAVQA
Trigger: TGCCTGGACCGCAGGGACCCAAGGGCTTTCCAGGAC...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCGGGTCCTGGAGCCCCTaGCAACCCGGGGTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTGSWSP*QPGVAF
Trigger: AAAGGCGACCCCGGGTTGCCAGGGGCTCCAGGACCC...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAGACCTGGAGGGCCTCTaGTTCCTGGAGGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTDLEGL*FLEGPG
Trigger: TCCTGGGCCCTCCAGGAATCAGAGGCCCTCCAGGTC...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGGGCCACCGCGTCTCCTaGGCAGCGCGGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLGHRVS*AARLWE
Trigger: CTCCCAGAGCCGCGCTGCGCAGGAGACGCGGTGGCC...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCAGGCCTGGTTCTCCAGGTGTaGCAGGTGGCCCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TFLFHDILEMGWLGILPGLVLQV*QVALGF
Trigger: GAAGCCCAGGGCCACCTGGCACACCTGGAGAACCAG...GCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAGGGGAGGCCAGTGCTTaGCCGGTGCCCTCAGAACCT +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTGEASA*PVPSEP
Trigger: AGGTTCTGAGGGCACCGGGCAAGCACTGGCCTCCCC...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAGCCAGGGGAGGCCAGTaGTTGCCCGGTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSARGGQ*LPGALR
Trigger: TCTGAGGGCACCGGGCAAGCACTGGCCTCCCCTGGC...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCATCTCCTCTGGGGCCTaGTGGTCCTGCTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTISSGA*WSCWSG
Trigger: CCCGGACCAGCAGGACCACCAGGCCCCAGAGGAGAT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACATCCTGGATCCCCCGTTaGTCCCGGTGGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTSWIPR*SRWSWP
Trigger: AGGCCAGGACCACCGGGACCAACGGGGGATCCAGGA...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAGAGCCCCGGGTCACCTaGGACACCCACTTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSEPRVT*DTHLPL
Trigger: GAGGGGCAAGTGGGTGTCCCAGGTGACCCGGGGCTC...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAAGCCTGGAAGTCCTTaGGCTCCCCTGGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEKPGSP*APLGPS
Trigger: AGAGGGTCCCAGGGGAGCCCAAGGACTTCCAGGCTT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAGTTCCCAGGGGGCCCTaGAGGGCCAATGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSVPRGP*RANGSR
Trigger: CCTGGAGCCATTGGCCCTCCAGGGCCCCCTGGGAAC...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCAGGCGTTTCCAGGTGGCCCTaGTGGCCCAGGTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TFLFHDILEMGWLGILPGVSRWP*WPRFSL
Trigger: CAGGGAGAACCTGGGCCACCAGGGCCACCTGGAAAC...GCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CCA 90 bp GGAGGCCAGTGCTTGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAATGGTCCAGGAGTTCCTaGTTTTCCATCCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGQCLPGALRTCTCEHDEWSRSS*FSILAW
Trigger: CCAGGCAAGGATGGAAAACCAGGAACTCCTGGACCA...TTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACTGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAACCCCTGTTGCCCTTaGCTCCCTCACTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSENPCCP*LPHFQG
Trigger: TCCCTGGAAGTGAGGGAGTCAAGGGCAACAGGGGTT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GGAGGCCAGTGCTTGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAATTTGACTGTGTCGGGTaGAGACAAAGCCTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GGQCLPGALRTCTCEHDEFDCVG*RQSLSL
Trigger: CAACGAGAGGCTTTGTCTTCACCCGACACAGTCAAA...TTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACTGGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACTGGTTCTCCAGGTGTaGCAGGTGGCCCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTLVLQV*QVALGF
Trigger: GAAGCCCAGGGCCACCTGGCACACCTGGAGAACCAG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCAGGCCCAGTGCTTGCCCGGTaGCCTCAGAACCTGCACTTG +
Preference number: 4 (lower is better)
Translates to: TFLFHDILEMGWLGILPGPVLAR*PQNLHL
Trigger: CAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACTGG...GCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CCA 90 bp ATCCACAAGCCAAGAACAGGGGCCCCACAAGAAACCAACGCTGCCGACAGCTTGATGAGGTCAGTAGGGTaGGCCCTAATCCAATGTGAG +
Preference number: 4 (lower is better)
Translates to: IHKPRTGAPQETNAADSLMRSVG*ALIQCE
Trigger: CTCACATTGGATTAGGGCCCACCCTACTGACCTCAT...CAAGCTGTCGGCAGCGTTGGTTTCTTGTGGGGCCCCTGTTCTTGGCTTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAGGGCCCTGGTGGGCCTaGAGTGCCTTCATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTGPWWA*SAFISL
Trigger: AAGGGAGATGAAGGCACTCCAGGCCCACCAGGGCCC...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAAAAACGATGTCACCTaGCGGTCCTGGAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEKNDVT*RSWRSR
Trigger: CCGGGACCTCCAGGACCGCCAGGTGACATCGTTTTT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAACTCCTTGCGTGCCCTaGAGACCAGGTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSETPCVP*RPGSPW
Trigger: CCAAGGAGAACCTGGTCTCCAGGGCACGCAAGGAGT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAACTGGTCCTCCAGGCATaGCTACTGCTGGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSELVLQA*LLLVLP
Trigger: AGGGAGAACCAGCAGTAGCCATGCCTGGAGGACCAG...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATCCTTGTTCTCCAGGTaGTCCAGGCTGCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSESLFSR*SRLPWI
Trigger: GATCCAGGGCAGCCTGGACCACCTGGAGAACAAGGA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR CAA 72 bp TCTTCCCCTACCCAGGGTCTGAAGTTTCAGGAAGGGTaGGCGGGGCAATCAAACACTGATTTAGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SSPTQGLKFQEG*AGQSNTDLASL
Trigger: CAGGGAGGCTAAATCAGTGTTTGATTGCCCCGCCAACCCTTCCTGAAACTTCAGACCCTGGGTAGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCAGGCACCTGGCAATCCATCTaGTCCAGCTGGTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TFLFHDILEMGWLGILPGTWQSI*SSWSWL
Trigger: GAGCCAGGACCAGCTGGATCAGATGGATTGCCAGGT...GCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCCCTGGGACCCTCTATaGACCTTCCTGGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTPWDPL*TFLGVL
Trigger: AAGGACCCCCAGGAAGGTGCATAGAGGGTCCCAGGG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCGGCCCAGGTTCTCCCTaGATCCCTGGTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTGPGSP*IPGSPG
Trigger: ACCTGGAGAACCAGGGATGCAGGGAGAACCTGGGCC...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAGTTCCCCATGCTTCCTaGTATACCACGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEVPHAS*YTTQSW
Trigger: CCAGGACTGCGTGGTATACCAGGAAGCATGGGGAAC...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACCCCGTTGGTCCCGGTaGTCCTGGCCTTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSPRWSR*SWPCTF
Trigger: GAAGGTACAAGGCCAGGACCACCGGGACCAACGGGG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACCCTTTCTCCCAGGTTaGCCTCTGAGCCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSPFLPG*PLSPGS
Trigger: TGACCCGGGGCTCAGAGGCCAACCTGGGAGAAAGGG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAACTCTATGCACCTTCCTaGGGGTCCTTGTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSELYAPS*GSLFSR
Trigger: CCTGGAGAACAAGGACCCCCAGGAAGGTGCATAGAG...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGGCTCCCCCTCTGCCCTaGTGTGCCTGGGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLAPPLP*CAWVPR
Trigger: CCTGGGAACCCAGGCACACCAGGGCAGAGGGGGAGC...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAACCAGGGTTCCCTCTTaGGCCTGGAGGGGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSTRVPS*AWRGPQ
Trigger: TTGAGGGCCCCTCCAGGCCCAAGAGGGAACCCTGGT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAACGCCTGGAAACCCCTaGAATCCAGGATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSETPGNP*NPGSPL
Trigger: CAGAGGTGATCCTGGATTCCAGGGGTTTCCAGGCGT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR CAA 72 bp AAGAGGCACGGATGGAGCAGTTGTAGCCAGCCGTACTaGGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTT +
Preference number: 4 (lower is better)
Translates to: KRHGWSSCSQPY*VTACGVVAWVF
Trigger: AAATACCCAAGCAACAACTCCGCAGGCAGTTACCAAGTACGGCTGGCTACAACTGCTCCATCCGTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAATCCAGGGGCTCCTCTaGGGCCAGGCCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSIQGLL*GQALMI
Trigger: GATCATCAAGGCCTGGCCTCAGAGGAGCCCCTGGAT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAACCTGGCAATCCATCTaGTCCAGCTGGTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTTWQSI*SSWSWL
Trigger: GAGCCAGGACCAGCTGGATCAGATGGATTGCCAGGT...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAACTGGTAAGAGGGCATaGGAAGATGGAGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSETGKRA*EDGGLS
Trigger: ACTCAGGCCTCCATCTTCTCATGCCCTCTTACCAGT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACAGGATTCCCAGTGCTaGCCAAATCTCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTQDSQC*PNLLWG
Trigger: GCCCCAGAGGAGATTTGGGCAGCACTGGGAATCCTG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAAAGCCCTTGGGTCCCTaGGGTCCAGGCAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSKPLGP*GPGKPS
Trigger: TGAAGGCTTGCCTGGACCGCAGGGACCCAAGGGCTT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCTTTCCGGGTTTTCCCTaGAGGCCAGGGTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTFPGFP*RPGSPG
Trigger: TCCTGGAGACCCTGGCCTGCAGGGAAAACCCGGAAA...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAATCGCTGCAGGCAGCTaGCAAGAGTTCCAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEIAAGS*QEFQGL
Trigger: AAGACCTTGGAACTCTTGGCAGCTGCCTGCAGCGAT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp AAGAAGATTCAGACACTTGGAAAACACTGGAAGAAGATAGCCATCCACAAGCCAATCTCCTCTGGGGCCTaGTGGTCCTGCTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: KKIQTLGKHWKKIAIHKPISSGA*WSCWSG
Trigger: CCCGGACCAGCAGGACCACCAGGCCCCAGAGGAGAT...TGGCTTGTGGATGGCTATCTTCTTCCAGTGTTTTCCAAGTGTCTGAATCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp GTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGAAAAGAAGATTCTCCTGGATCCCCCGTTaGTCCCGGTGGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VGWALIQCEWCLYKKRRFSWIPR*SRWSWP
Trigger: AGGCCAGGACCACCGGGACCAACGGGGGATCCAGGA...GAATCTTCTTTTCTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp ATTAAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATATCACCCGGCAGTCCTaGATCCCCCGTTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: IKMRSVGWALIQCEWCLYITRQS*IPRWSR
Trigger: CCGGGACCAACGGGGGATCCAGGACTGCCGGGTGAT...ATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACCCCAAATGTCCAGGTaGGCCAGGTTGCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTPQMSR*ARLPHF
Trigger: GAAATGGGGCAACCTGGCCCACCTGGACATTTGGGG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCGGGCCTGGCAAACCCTaGGGTCCTGGAGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFGPGKP*GPGAPG
Trigger: GCCAGGGGCTCCAGGACCCCAGGGTTTGCCAGGCCC...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTGGCCACGAGCTCCTCTaGGCCCTGGTGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFGHELL*ALVGLE
Trigger: CTCCAGGCCCACCAGGGCCCAGAGGAGCTCGTGGCC...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACATCCCCTGGAGGACCTTaGTCCCCTTTCTCACCACTC +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTSPGGP*SPFSPL
Trigger: GAGTGGTGAGAAAGGGGACCAAGGTCCTCCAGGGGA...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGGGGTCCGTAGCCAGGTaGTCCAGCTGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLGSVAR*SSWSCR
Trigger: CCTGCAGGACCAGCTGGACCACCTGGCTACGGACCC...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAACCCTGGATCTCCTCGTaGTCCATCAAGCCCTTCATT +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEPWISS*SIKPFI
Trigger: AATGAAGGGCTTGATGGACCACGAGGAGATCCAGGG...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAGTCCTTGGGCTCCCCTaGGACCCTCTATGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSVLGLP*DPLCTF
Trigger: GAAGGTGCATAGAGGGTCCCAGGGGAGCCCAAGGAC...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCATTCCCCCTTGGCTCCTaGGGTTCCTCTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSFPLGS*GSSLAL
Trigger: AAGGGCCAGAGAGGAACCCCAGGAGCCAAGGGGGAA...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACTCCCCTGTCTCCTTTaGCTCCTTGAGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTLPCLL*LLEHQG
Trigger: ACCCTGGTGCTCAAGGAGCCAAAGGAGACAGGGGAG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCAAGACCTGGAGTACCTaGTGCTCCCAGACGACCTGG +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTKTWST*CSQTTW
Trigger: CCAGGTCGTCTGGGAGCACCAGGTACTCCAGGTCTT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATGGTCCAGGAGTTCCTaGTTTTCCATCCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEWSRSS*FSILAW
Trigger: CCAGGCAAGGATGGAAAACCAGGAACTCCTGGACCA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAGTCCGGGTAGTCCTTTaGGGCCCTTTAAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTVRVVL*GPLNLA
Trigger: TGCCAGGTTTAAAGGGCCTCAAAGGACTACCCGGAC...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCAGCCTTCAGGACCTGTaGATCCTTTCTGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTSLQDL*ILSGQE
Trigger: CTCCTGGCCAGAAAGGATTCACAGGTCCTGAAGGCT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGTTCTCCAGGCAGTCCTaGGGGTCCAGGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLFSRQS*GSRRSR
Trigger: CCTGGACCTCCTGGACCCTCAGGACTGCCTGGAGAA...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAGCCTGGAACTGGTGTTaGAACACTGAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTAWNWC*NTELSP
Trigger: AGGGGAGAGCTCAGTGTTTCAACACCAGTTCCAGGC...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATTTGACTGTGTCGGGTaGAGACAAAGCCTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEFDCVG*RQSLSL
Trigger: CAACGAGAGGCTTTGTCTTCACCCGACACAGTCAAA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACTCCAGGATTCCCAGTaGTGCCCAAATCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTLQDSQ*CPNLLW
Trigger: CCAGAGGAGATTTGGGCAGCACTGGGAATCCTGGAG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCACCCTCTGCCCTGGTGTaGCTGGGTTCCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSPSALV*LGSQGA
Trigger: GGCCCCCTGGGAACCCAGGCACACCAGGGCAGAGGG...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACTGGGAATCCTTCTATaGCTGTGGGTCCTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTLGILL*LWVLEV
Trigger: GACCTCGAGGACCCACAGGCATAGAAGGATTCCCAG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ATTAAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATCGGAGCTGCTGGAACTaGGAGGCCAGGACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: IKMRSVGWALIQCEWCLYRSCWN*EARTSR
Trigger: CCTGGAAGTCCTGGCCTCCCAGTTCCAGCAGCTCCG...ATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp AAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGCAGACTCGGAGCTGCTaGAACTGGGAGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: KMRSVGWALIQCEWCLYKQTRSC*NWEART
Trigger: AGTCCTGGCCTCCCAGTTCCAGCAGCTCCGAGTCTG...CTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATTGCCTGGGGTGCCTaGAAGTCCAGGAGAACCAGA +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTIAWGA*KSRRTR
Trigger: TCTGGTTCTCCTGGACTTCCAGGCACCCCAGGCAAT...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCAGGTCCCATGGCTCCTaGAAAGCCAAAGAATCCCGG +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTRSHGS*KAKESR
Trigger: CCGGGATTCTTTGGCTTTCCAGGAGCCATGGGACCT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCACAATAACTGTTCCTaGTGGTCCCGGGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTHNNCS*WSRGSC
Trigger: ACAGGACCCCCGGGACCACCAGGAACAGTTATTGTG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAACCGGGCAGACCTGGTaGCCCTGGGAATCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSTGQTW*PWESFY
Trigger: ATAGAAGGATTCCCAGGGCCACCAGGTCTGCCCGGT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATGGCCCTGGGCTTCCTaGAAGGGAGATAATCTTAAG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEWPWAS*KGDNLK
Trigger: CTTAAGATTATCTCCCTTCCAGGAAGCCCAGGGCCA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp AAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCACGTTCCTCTTCCATTCCAGGTGTGCCAGGTaGCCCTGGGCTTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KPARNCRNLNSSCTFLFHSRCAR*PWASWK
Trigger: CTTCCAGGAAGCCCAGGGCCACCTGGCACACCTGGA...ATGGAAGAGGAACGTGCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAAAACCCAAATCACCATaGGGACCTGGCTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTKPKSP*GPGFPG
Trigger: CCCAGGAAAGCCAGGTCCTCATGGTGATTTGGGTTT...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCATCTCCTTTGGCTCCTTaGGCACCAGGGTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSSPLAP*APGFPL
Trigger: AAGAGGGAACCCTGGTGCTCAAGGAGCCAAAGGAGA...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp AGTGCTTGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATTGTCCAGGTTGCAGGTaGTCCACTGTCTCCACGTTT +
Preference number: 4 (lower is better)
Translates to: SACPVPSEPALVNMMNENCPGCR*STVSTF
Trigger: AAACGTGGAGACAGTGGATCACCTGCAACCTGGACA...ATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp ACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCAGGCTGTCCCCTCTGGACATaGAGGAATTGCTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TFLFHDILEMGWLGILPGCPLWT*RNCCGL
Trigger: CAAACCACAGCAATTCCTTCATGTCCAGAGGGGACA...GCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCATCAGTGGTTTGGCTGTaGACGGCTATGGCGATCGCA +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSSVVWL*TAMAIA
Trigger: TGCGATCGCCATAGCCGTTCACAGCCAAACCACTGA...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ATTAAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATTCACAGACTCGGAGCTaGTGGAACTGGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IKMRSVGWALIQCEWCLYSQTRS*WNWEAR
Trigger: CCTGGCCTCCCAGTTCCAGCAGCTCCGAGTCTGTGA...ATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACTGGTGGGCCTGGAGTaGCTTCATCTCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSLVGLE*LHLPFP
Trigger: AGGAAAAGGGAGATGAAGGCACTCCAGGCCCACCAG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCTCCTTTCAAGCCAGCTaGGCCTTGTCTTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTSFQAS*ALSSWD
Trigger: ATCCCAGGAAGACAAGGCGCAGCTGGCTTGAAAGGA...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAGGTGCCCTCAGAACCTaGACTTGTGAACATGATGAA +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEGALRT*TCEHDE
Trigger: TTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACC...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGCCAGTGCTTGCCCGGTaGCCTCAGAACCTGCACTTG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLPVLAR*PQNLHL
Trigger: CAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACTGG...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGAAAAGAAGATTCTGCCCAAATCTCCTCTaGGGCCTGGTGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VGWALIQCEWCLYKKRRFCPNLL*GLVVLL
Trigger: CAGCAGGACCACCAGGCCCCAGAGGAGATTTGGGCA...GAATCTTCTTTTCTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp AAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGCCCCAAATGTCCAGGTaGGCCAGGTTGCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: KMRSVGWALIQCEWCLYKPQMSR*ARLPHF
Trigger: GAAATGGGGCAACCTGGCCCACCTGGACATTTGGGG...CTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAATTTCCTGGGGACCCTaGGCTTCCTTTCAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSISWGP*ASFQAS
Trigger: GCTGGCTTGAAAGGAAGCCCAGGGTCCCCAGGAAAT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCGGGCCCTGGAGGTCCTaGTGGGCCTGGAACTGGTGT +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFGPWRS*WAWNWC
Trigger: ACACCAGTTCCAGGCCCACCAGGACCTCCAGGGCCC...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGTTCTCCCTTGGCTCCTaGGAGGCCTGGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLFSLGS*EAWLSR
Trigger: CCTGGAAAGCCAGGCCTCCCAGGAGCCAAGGGAGAA...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCAAAACCTGGTGTTCCTaGTCCTCCAGGCATGGCTAC +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTKTWCS*SSRHGY
Trigger: GTAGCCATGCCTGGAGGACCAGGAACACCAGGTTTT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAAAGCCCTTCATTTCCTaGAGTTCCAGGGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTKPFIS*SSRETW
Trigger: CCAGGTCTCCCTGGAACTCCAGGAAATGAAGGGCTT...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCATCCTTCTATGCCTGTaGGTCCTCGAGGTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTILLCL*VLEVQH
Trigger: ATGCTGGACCTCGAGGACCCACAGGCATAGAAGGAT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACAGACCTGGTGGCCCTaGGAATCCTTCTATGCCTGT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSQTWWP*ESFYAC
Trigger: ACAGGCATAGAAGGATTCCCAGGGCCACCAGGTCTG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCCACGATTTCCTGTCTaGCCAGGGATAATTGCACCG +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTPRFPV*PGIIAP
Trigger: CGGTGCAATTATCCCTGGCCAGACAGGAAATCGTGG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGGGGTCCTGGAAGACCTaGAGTACCTGGTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLGSWKT*STWCSQ
Trigger: CTGGGAGCACCAGGTACTCCAGGTCTTCCAGGACCC...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACATCCACGTACACCAGGTaGTCCTTTTGGCCCAATTGG +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTSTYTR*SFWPNW
Trigger: CCAATTGGGCCAAAAGGACCACCTGGTGTACGTGGA...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp AAGAAGATTCAGACACTTGGAAAACACTGGAAGAAGATAGCCATCCACAAGCCATCTCCCTGGAGACCATaGATACCTGGGAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KKIQTLGKHWKKIAIHKPSPWRP*IPGRPG
Trigger: ACCAGGCCTCCCAGGTATTCATGGTCTCCAGGGAGA...TGGCTTGTGGATGGCTATCTTCTTCCAGTGTTTTCCAAGTGTCTGAATCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR TCA 90 bp ATCCACAAGCCAAGAACAGGGGCCCCACAAGAAACCAACGCTGCCGACAGCTTGTATTTAAGTAAGACCTaGATCTGCAACCCGATAGTT +
Preference number: 4 (lower is better)
Translates to: IHKPRTGAPQETNAADSLYLSKT*ICNPIV
Trigger: AACTATCGGGTTGCAGATTCAGGTCTTACTTAAATA...CAAGCTGTCGGCAGCGTTGGTTTCTTGTGGGGCCCCTGTTCTTGGCTTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR TCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCCTGGATATCCTCTTTaGCCCAGTGGTCCCATTTCA +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTPGYPL*PSGPIS
Trigger: TGAAATGGGACCACTGGGTCAAAGAGGATATCCAGG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCTACGTGGGATATCTCTaGAGGCCCGGGATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTYVGYL*RPGISF
Trigger: AAAGGAAATCCCGGGCCTTCAGAGATATCCCACGTA...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACATTTATGCCTATTACATaGCTCCCTGGAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTFMPIT*LPGGPG
Trigger: CCCTGGACCTCCAGGGAGTCATGTAATAGGCATAAA...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp TGCACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCAGGAATTGCTGTGGTTTaGCTGTGTCGGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: CTFLFHDILEMGWLGILPGIAVV*LCRVKT
Trigger: TGTCTTCACCCGACACAGTCAAACCACAGCAATTCC...TGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAAGAGAAATCCAGCCGTaGGGACATGGAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTREIQP*GHGGMS
Trigger: TGACATTCCTCCATGTCCTCACGGCTGGATTTCTCT...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAGATGTAAAAATGGCTTaGCAGCAAACACGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEDVKMA*QQTREQ
Trigger: CTGCTCACGTGTTTGCTGTCAAGCCATTTTTACATC...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACCAGAGACCACACTTTaGGAACTACTGGCCTACAGA +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTPETTL*ELLAYR
Trigger: TCTGTAGGCCAGTAGTTCTCAAAGTGTGGTCTCTGG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGAAAAGAAGATTCCAGGATTCCCAGTGCTaGCCAAATCTCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VGWALIQCEWCLYKKRRFQDSQC*PNLLWG
Trigger: GCCCCAGAGGAGATTTGGGCAGCACTGGGAATCCTG...GAATCTTCTTTTCTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR GCA 90 bp ATTAAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATGAGGCCTGGTCTTCCTaGTCGACCTGGGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: IKMRSVGWALIQCEWCLYEAWSS*STWESQ
Trigger: TTGGGATTCCCAGGTCGAGCAGGAAGACCAGGCCTC...ATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR GCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGTCCAGGCATGGCTACTaGTGGTTCTCCCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLSRHGY*WFSLGS
Trigger: GGAGCCAAGGGAGAACCAGCAGTAGCCATGCCTGGA...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCAGGCGGTGCCCTCAGAACCTaGACTTGTGAACATGATGAA +
Preference number: 4 (lower is better)
Translates to: TFLFHDILEMGWLGILPGGALRT*TCEHDE
Trigger: TTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACC...GCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACATGGCCATAGTCTGTaGTGTCCTCTGGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTHGHSL*CPLGHV
Trigger: AACATGACCCAGAGGACAGCACAGACTATGGCCATG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp AAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGGAGACCATGAATACCTaGGAGGCCTGGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KMRSVGWALIQCEWCLYKETMNT*EAWSSC
Trigger: GCAGGAAGACCAGGCCTCCCAGGTATTCATGGTCTC...CTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp TCAATCCAGAAATGGGTTCGAAAAAGAGTCACAGCACAGTGTTGTAGTTTGAATCCCCGTTGGTCCCGGTaGTCCTGGCCTTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: SIQKWVRKRVTAQCCSLNPRWSR*SWPCTF
Trigger: GAAGGTACAAGGCCAGGACCACCGGGACCAACGGGG...ATTCAAACTACAACACTGTGCTGTGACTCTTTTTCGAACCCATTTCTGGATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAATCACCCGGCAGTCCTaGATCCCCCGTTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSITRQS*IPRWSR
Trigger: CCGGGACCAACGGGGGATCCAGGACTGCCGGGTGAT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCAGAACCACTGCATCCTaGTACACCGACAAGTCCGTA +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTRTTAS*YTDKSV
Trigger: TACGGACTTGTCGGTGTACCAGGATGCAGTGGTTCT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGCATGGCATCCTTTCCTaGGCGGCCTCGTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLHGILS*AASFPF
Trigger: AAAGGGGAACGAGGCCGCCCAGGAAAGGATGCCATG...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCTCCGTGATCTCCAGGTaGACCCTTGCGAAAAACGAT +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTSVISR*TLAKND
Trigger: ATCGTTTTTCGCAAGGGTCCACCTGGAGATCACGGA...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAAAGACCTGTATTTCCTaGGGACCCTGGGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTKTCIS*GPWASF
Trigger: AAAGGAAGCCCAGGGTCCCCAGGAAATACAGGTCTT...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAGAAACCTGGAAATCCTaGAAGACCTGTATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEETWKS*KTCISW
Trigger: CCAGGAAATACAGGTCTTCCAGGATTTCCAGGTTTC...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGGTCACCCTGGGCACCTaGGAAACCTGGAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLVTLGT*ETWKSW
Trigger: CCAGGATTTCCAGGTTTCCCAGGTGCCCAGGGTGAC...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGATCACCATGAGGACCTaGCTTTCCTGGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLITMRT*LSWEAR
Trigger: CCTGGCCTCCCAGGAAAGCCAGGTCCTCATGGTGAT...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAAGATCCTGGAAATCCTaGAAGACCTGGAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSRSWKS*KTWRAS
Trigger: AGAGGCCCTCCAGGTCTTCCAGGATTTCCAGGATCT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTGCACCGGGCAGACCTaGTGGCCCTGGGAATCCTTC +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFCTGQT*WPWESF
Trigger: GAAGGATTCCCAGGGCCACCAGGTCTGCCCGGTGCA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCTTTTCCATCCTTGCCTaGCTTACCTCTTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTFSILA*LTSWPT
Trigger: TGTGGGCCAAGAGGTAAGCCAGGCAAGGATGGAAAA...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACCAGCCGTGAGGACATaGAGGAATGTCAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSPAVRT*RNVSGL
Trigger: CAAACCACTGACATTCCTCCATGTCCTCACGGCTGG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCAGTTTCAGGAAGGGTTaGCGGGGCAATCAAACACTG +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTSFRKG*RGNQTL
Trigger: CAGTGTTTGATTGCCCCGCCAACCCTTCCTGAAACT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAAAAAAGAGGCACGGATaGAGCAGTTGTAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSKKRHG*SSCSQP
Trigger: CGGCTGGCTACAACTGCTCCATCCGTGCCTCTTTTT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCTGAGTGGAGGCCAGTaGTTTGACATTAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTLSGGQ*FDISTS
Trigger: ACTGGTGCTAATGTCAAACCACTGGCCTCCACTCAG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGCACCTTTGGAACCCGTaGGTCCTGGAAGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLHLWNP*VLEVLE
Trigger: TTCCAGGACTTCCAGGACTCACGGGTTCCAAAGGTG...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAGGAATTGCTGTGGTTTaGCTGTGTCGGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSGIAVV*LCRVKT
Trigger: TGTCTTCACCCGACACAGTCAAACCACAGCAATTCC...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp AAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCACGTTCCTCTTCCATTCAGTGGTTTGGCTGTaGACGGCTATGGCGATCGCA +
Preference number: 4 (lower is better)
Translates to: KPARNCRNLNSSCTFLFHSVVWL*TAMAIA
Trigger: TGCGATCGCCATAGCCGTTCACAGCCAAACCACTGA...ATGGAAGAGGAACGTGCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp AAGAAGATTCAGACACTTGGAAAACACTGGAAGAAGATAGCCATCCACAAGCCACTCCAGGATTCCCAGTaGTGCCCAAATCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KKIQTLGKHWKKIAIHKPLQDSQ*CPNLLW
Trigger: CCAGAGGAGATTTGGGCAGCACTGGGAATCCTGGAG...TGGCTTGTGGATGGCTATCTTCTTCCAGTGTTTTCCAAGTGTCTGAATCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR GCA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAACCTCTTCTGCCTTGTTaGCCTTTCAATCCATTTAAG +
Preference number: 4 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEPLLPC*PFNPFK
Trigger: CTTAAATGGATTGAAAGGGCAACAAGGCAGAAGAGG...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTCTGGCCAGGGATAATTaGACCGGGCAGACCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFLARDN*TGQTWW
Trigger: CCACCAGGTCTGCCCGGTGCAATTATCCCTGGCCAG...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp AGTGCTTGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATGACCTTCACAAACAGTaGATCAAGGTCTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SACPVPSEPALVNMMNENDLHKQ*IKVLSV
Trigger: CACGGACAAGACCTTGATGCACTGTTTGTGAAGGTC...ATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTGCCCAAATCTCCTCTaGGGCCTGGTGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFCPNLL*GLVVLL
Trigger: CAGCAGGACCACCAGGCCCCAGAGGAGATTTGGGCA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCAAATTCATATGCTGAAGTCCTAACCTTCAGTACTTCGGAACATGACTCTGTAAATACCTGGGAGGCCTaGTCTTCCTGCTCGACCTGG +
Preference number: 4 (lower is better)
Translates to: PNSYAEVLTFSTSEHDSVNTWEA*SSCSTW
Trigger: CCAGGTCGAGCAGGAAGACCAGGCCTCCCAGGTATT...TACAGAGTCATGTTCCGAAGTACTGAAGGTTAGGACTTCAGCATATGAATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTGTAGCCCAGTGTCCCTaGGAGTCCTGGAAACCCCTG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFVAQCP*ESWKPL
Trigger: CAGGGGTTTCCAGGACTCCCAGGGACACTGGGCTAC...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCAAAACCTGGAGGGCCTaGCAAACCCTGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFKTWRA*QTLGSW
Trigger: CCAGGACCCCAGGGTTTGCCAGGCCCTCCAGGTTTT...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTAGGCCCAGGAAAACCTaGAGGGCCTGGCAAACCCTG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFRPRKT*RAWQTL
Trigger: CAGGGTTTGCCAGGCCCTCCAGGTTTTCCTGGGCCT...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAACCCAGGAGTCCCCATaGCATCCTTTCCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSTQESP*HPFLGG
Trigger: GCCGCCCAGGAAAGGATGCCATGGGGACTCCTGGGT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACATGCGCCTTGTCTTCCTaGGATTCCTTTTACACCATG +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTCALSS*DSFYTM
Trigger: CATGGTGTAAAAGGAATCCCAGGAAGACAAGGCGCA...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTGGTCCAGGCTGCCCTaGATCTCCTCGTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFWSRLP*ISSWSI
Trigger: GATGGACCACGAGGAGATCCAGGGCAGCCTGGACCA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCGCCCTGGAGGGCCAATaGCTCCAGGAAAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFALEGQ*LQESPS
Trigger: TGATGGGCTTTCCTGGAGCCATTGGCCCTCCAGGGC...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTGCTCCCAGACGACCTaGTGGTCCCATGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFCSQTT*WSHVSC
Trigger: GCAGGAGACATGGGACCACCAGGTCGTCTGGGAGCA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGATCACCTCTGGGTCCTaGAAGACCTGGAGTACCTGG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLITSGS*KTWSTW
Trigger: CCAGGTACTCCAGGTCTTCCAGGACCCAGAGGTGAT...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCATCCAGGTGTGCCAGGTaGCCCTGGGCTTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSSRCAR*PWASWK
Trigger: CTTCCAGGAAGCCCAGGGCCACCTGGCACACCTGGA...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGTTTCCAGGTGGCCCTaGTGGCCCAGGTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSVSRWP*WPRFSL
Trigger: CAGGGAGAACCTGGGCCACCAGGGCCACCTGGAAAC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCATGGAGGAATGTCAGTaGTTTGGCTGTGAACGGCTA +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTMEECQ*FGCERL
Trigger: TAGCCGTTCACAGCCAAACCACTGACATTCCTCCAT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTCTCCCTGGAGACCATaGATACCTGGGAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFSPWRP*IPGRPG
Trigger: ACCAGGCCTCCCAGGTATTCATGGTCTCCAGGGAGA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp AAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGTGGCCTTGTACCTTCTaGATAACCTGGCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KMRSVGWALIQCEWCLYKWPCTF*ITWLSL
Trigger: AAGGGAGAGCCAGGTTATTCAGAAGGTACAAGGCCA...CTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR TCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTCCTGGAAGACCTGGTaGACCAGCACAACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFSWKTW*TSTTWG
Trigger: TCCCCAGGTTGTGCTGGTTCACCAGGTCTTCCAGGA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCCCAGCTTTCACAGTTaGTGGAATAGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTPSFHS*WNRLSE
Trigger: TTCAGAAAGCCTATTCCATCAACTGTGAAAGCTGGG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp TGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATCCTTTCCCCAGCTTTCACAGTTaGTGGAATAGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: CPVPSEPALVNMMNENPFPSFHS*WNRLSE
Trigger: TTCAGAAAGCCTATTCCATCAACTGTGAAAGCTGGG...GAAAGGATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCCCCCTACCCAGGGTCTaGAGTTTCAGGAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFPLPRV*SFRKGW
Trigger: CCAACCCTTCCTGAAACTTCAGACCCTGGGTAGGGG...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCACGTAAGGCCCGGTATTaGCTGGGGTGCCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSRKARY*LGCLEV
Trigger: GACTTCCAGGCACCCCAGGCAATACCGGGCCTTACG...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGCTCCAGGAACTCCTTaGGTGCCCTGGAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSAPGTP*VPWRPG
Trigger: ACCTGGTCTCCAGGGCACGCAAGGAGTTCCTGGAGC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAATTGTGGTAAATCGCTaGAGGCAGCTGCCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSIVVNR*RQLPRV
Trigger: AACTCTTGGCAGCTGCCTGCAGCGATTTACCACAAT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCTGCCTGCGGAGTTGTTaGTTGGGTATTTGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTCLRSC*LGICLE
Trigger: TTCTAGACAAATACCCAAGCAACAACTCCGCAGGCA...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCATACTTGGTAACTGCCTaGGGAGTTGTTGCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSYLVTA*GVVAWV
Trigger: TACCCAAGCAACAACTCCGCAGGCAGTTACCAAGTA...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGGCCGTACTTGGTAACTaGCTGCGGAGTTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLAVLGN*LRSCCL
Trigger: CAAGCAACAACTCCGCAGGCAGTTACCAAGTACGGC...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACATTTTCCTTTAGAACCTaGCATGCCCATGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTFSFRT*HAHVPH
Trigger: ATGGGGAACATGGGCATGCCAGGTTCTAAAGGAAAA...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp AAGAAGATTCAGACACTTGGAAAACACTGGAAGAAGATAGCCATCCACAAGCCATCTTCCTGCTCGACCTaGGAATCCCAAAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KKIQTLGKHWKKIAIHKPSSCST*ESQSSP
Trigger: AGGGGAACTTTGGGATTCCCAGGTCGAGCAGGAAGA...TGGCTTGTGGATGGCTATCTTCTTCCAGTGTTTTCCAAGTGTCTGAATCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTGTCCCTGGGAGTCCTaGAAACCCCTGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFCPWES*KPLLTL
Trigger: AAGGGTGAGCAGGGGTTTCCAGGACTCCCAGGGACA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTGGCCTGGTTCTCCTTTaGGCCCATCAACTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFGLVLL*AHQLLG
Trigger: TCCCAGGAGTTGATGGGCCCAAAGGAGAACCAGGCC...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGGGCACCTGGGAAACCTaGAAATCCTGGAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLGTWET*KSWKTC
Trigger: ACAGGTCTTCCAGGATTTCCAGGTTTCCCAGGTGCC...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGGAGCCAGGATCCCCTaGAGGACCTTGGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSGARIP*RTLVPF
Trigger: AAAGGGGACCAAGGTCCTCCAGGGGATCCTGGCTCC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCAGGCATGGCTACTGCTaGTTCTCCCTTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFRHGYC*FSLGSW
Trigger: CCAGGAGCCAAGGGAGAACCAGCAGTAGCCATGCCT...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAAATTCCCGGATTTCCTaGATATCCTCTTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTNSRIS*ISSLTQ
Trigger: CTGGGTCAAAGAGGATATCCAGGAAATCCGGGAATT...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTCTGGCCCTTTACTCCTaGAATTCCAGGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFLALYS*NSRAPP
Trigger: AGGGGGAGCCCTGGAATTCCAGGAGTAAAGGGCCAG...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTCTCCTTGTTCCCCCTTaGCTCCTGGGGTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFLLVPP*LLGFLS
Trigger: AGAGAGGAACCCCAGGAGCCAAGGGGGAACAAGGAG...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTCCTGCAGTTCCAGGTaGACCTTTTGGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFSCSSR*TFWARV
Trigger: CACCCTGGCCCAAAAGGTCCACCTGGAACTGCAGGA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTGGCTGTGAACGGCTATaGCGATCGCAGGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFGCERL*RSQDLH
Trigger: GTGAAGGTCCTGCGATCGCCATAGCCGTTCACAGCC...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAATTCTAGAAATGGGCTaGCTCGGAATTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSILEMG*LGILPG
Trigger: GCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAAT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR CAA 72 bp CCAAGGGTATTATGGTTCCATCAGGGAATCCCCCTTTaGCCGTTAGTAATGGGCATGTTTGAAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PRVLWFHQGIPL*PLVMGMFETVL
Trigger: CAGGACTGTTTCAAACATGCCCATTACTAACGGCAAAAGGGGGATTCCCTGATGGAACCATAATACCCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp TCAATCCAGAAATGGGTTCGAAAAAGAGTCACAGCACAGTGTTGTAGTTTGAATGTCCGGGTAGTCCTTTaGGGCCCTTTAAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SIQKWVRKRVTAQCCSLNVRVVL*GPLNLA
Trigger: TGCCAGGTTTAAAGGGCCTCAAAGGACTACCCGGAC...ATTCAAACTACAACACTGTGCTGTGACTCTTTTTCGAACCCATTTCTGGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR TCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCATTCTCCAGGAAATCCTaGTCTATCCAAGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSFSRKS*SIQAWN
Trigger: ATTCCAGGCTTGGATAGATCAGGATTTCCTGGAGAA...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAACCTGGGCTTCCTCTTaGGCCTGGTGGACCACGATT +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSTWASS*AWWTTI
Trigger: AATCGTGGTCCACCAGGCTCAAGAGGAAGCCCAGGT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGTGTCCCCTCTGGACATaGAGGAATTGCTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLCPLWT*RNCCGL
Trigger: CAAACCACAGCAATTCCTTCATGTCCAGAGGGGACA...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp AAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCACGTTCCTCTTCCATAGAGAAATCCAGCCGTaGGGACATGGAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: KPARNCRNLNSSCTFLFHREIQP*GHGGMS
Trigger: TGACATTCCTCCATGTCCTCACGGCTGGATTTCTCT...ATGGAAGAGGAACGTGCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGGGGGCAATCAAACACTaGTTTAGCCTCCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLGAIKH*FSLPES
Trigger: AGACTCAGGGAGGCTAAATCAGTGTTTGATTGCCCC...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACATGTTCCCCAGAATTaGCTCTTTCTCCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSHVPQN*LFLLEN
Trigger: GTTTTCCAGGAGAAAGAGGCAATTCTGGGGAACATG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACCGTTTTACCTCTTCTaGCTTGTTGCCCTTTCAATC +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSPFYLF*LVALSI
Trigger: GATTGAAAGGGCAACAAGGCAGAAGAGGTAAAACGG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGTGTAGGTTAGTACAGTaGCTGGGACATGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLCRLVQ*LGHAWC
Trigger: GCACCAAGCATGTCCCAGGCACTGTACTAACCTACA...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGAAAAGAAGATTCTATACCACGCAGTCCTaGTTCTCCAGGATTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VGWALIQCEWCLYKKRRFYTTQS*FSRIPS
Trigger: ACTGGGAATCCTGGAGAACCAGGACTGCGTGGTATA...GAATCTTCTTTTCTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp TCAATCCAGAAATGGGTTCGAAAAAGAGTCACAGCACAGTGTTGTAGTTTGAATGTTCCCCATGCTTCCTaGTATACCACGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SIQKWVRKRVTAQCCSLNVPHAS*YTTQSW
Trigger: CCAGGACTGCGTGGTATACCAGGAAGCATGGGGAAC...ATTCAAACTACAACACTGTGCTGTGACTCTTTTTCGAACCCATTTCTGGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAAATACCTGGGAGGCCTaGTCTTCCTGCTCGACCTGG +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSNTWEA*SSCSTW
Trigger: CCAGGTCGAGCAGGAAGACCAGGCCTCCCAGGTATT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCGAGACCATGAATACCTaGGAGGCCTGGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFETMNT*EAWSSC
Trigger: GCAGGAAGACCAGGCCTCCCAGGTATTCATGGTCTC...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTGGAACCCGTGAGTCCTaGAAGTCCTGGAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFGTRES*KSWKAL
Trigger: AAGGGCTTTCCAGGACTTCCAGGACTCACGGGTTCC...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTGTACACAGGAGGCCTaGTTCTCCTTTGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFCTQEA*FSFGPI
Trigger: GATGGGCCCAAAGGAGAACCAGGCCTCCTGTGTACA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGAGACCGGGAGGCCCTaGGATATAAGGGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSETGRP*DIRALC
Trigger: ACACAGTGCCCTTATATCCCAGGGCCTCCCGGTCTC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTTCTCCTTTAAGTCCTaGGTCACCCTGGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFFSFKS*VTLGTW
Trigger: CCAGGTGCCCAGGGTGACCCAGGACTTAAAGGAGAA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATCCTTTCCAGAGAGAATTTTCCATCCTTGCCTaGCTTACCTCTTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: PSEPALVNMMNENPFQREFSILA*LTSWPT
Trigger: TGTGGGCCAAGAGGTAAGCCAGGCAAGGATGGAAAA...TTCTCTCTGGAAAGGATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGAGGGCATGAGAAGATaGAGGCCTGAGTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSEGMRR*RPEWRP
Trigger: TGGCCTCCACTCAGGCCTCCATCTTCTCATGCCCTC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR CAA 72 bp CCAGCCGTACTTGGTAACTGCCTGCGGAGTTGTTGCTaGGGTATTTGTCTAGAACAGGTTTTCTCAGTATTT +
Preference number: 4 (lower is better)
Translates to: PAVLGNCLRSCC*GICLEQVFSVF
Trigger: AAATACTGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACCAAGTACGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTGTCCAGGTTGCAGGTaGTCCACTGTCTCCACGTTT +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFCPGCR*STVSTF
Trigger: AAACGTGGAGACAGTGGATCACCTGCAACCTGGACA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp CCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATCCTTTCCAGAGAGAACACGTTCCTCTTCCATaGCATTCTAGAAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSEPALVNMMNENPFQREHVPLP*HSRNGL
Trigger: CAGCCCATTTCTAGAATGTCATGGAAGAGGAACGTG...TTCTCTCTGGAAAGGATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGGGTCCTCAGCAGGTCTaGAAATCCAGTTCTATACAC +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLGPQQV*KSSSIH
Trigger: GTGTATAGAACTGGATTTTCAGACCTGCTGAGGACC...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCCTCCAGGTGGACCCTTaGGAAAAACGATGTCACCTG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFLQVDP*EKRCHL
Trigger: CAGGTGACATCGTTTTTCGCAAGGGTCCACCTGGAG...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCCTGGTTTTCCATCCTTaGCTGGCTTACCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFLVFHP*LAYLLA
Trigger: GGCCAAGAGGTAAGCCAGGCAAGGATGGAAAACCAG...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp TTTCTGGGTTTAATGAAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCCTGGTTTTCCATCCTTaGCTGGCTTACCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FLGLMKPARNCRNLNSSCLVFHP*LAYLLA
Trigger: GGCCAAGAGGTAAGCCAGGCAAGGATGGAAAACCAG...GCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTTCATTAAACCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAGACCTTCACAAACAGTaGATCTGCTTATATAAGGCT +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTDLHKQ*ICLYKA
Trigger: AGCCTTATATAAGCAGATGCACTGTTTGTGAAGGTC...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCACTCCAGGATACCACATaGCCCCTTCTCTTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSLQDTT*PLLFPY
Trigger: GTAGGGGAAGAGAAGGGGGCATGTGGTATCCTGGAG...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTCTTCCTGCTCGACCTaGGAATCCCAAAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFSSCST*ESQSSP
Trigger: AGGGGAACTTTGGGATTCCCAGGTCGAGCAGGAAGA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAAGAACCAGAAAATCCTaGCAATCCACTTATTCCCCT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSRTRKS*QSTYSP
Trigger: AGGGGAATAAGTGGATTGCCAGGATTTTCTGGTTCT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCCCTGGGGTTCCTCTCTaGCCCTTTACTCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFPGVPL*PFTPGI
Trigger: AATTCCAGGAGTAAAGGGCCAGAGAGGAACCCCAGG...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAATTCCATCACGTCCTTaGTCACCTCTTATACCCATT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSIPSRP*SPLIPI
Trigger: AATGGGTATAAGAGGTGACCAAGGACGTGATGGAAT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTCCCTTTTCTCCGGCTaGACCAGGAATTCCATCACG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFSLFSG*TRNSIT
Trigger: CGTGATGGAATTCCTGGTCCAGCCGGAGAAAAGGGA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCATATTACATGACTCCCTaGAGGTCCAGGGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSYYMTP*RSRGTR
Trigger: CCTGGTCCCCCTGGACCTCCAGGGAGTCATGTAATA...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCACCTTTTGGGCCAGGGTaGCCCATAGACCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSPFGPG*PIDPLS
Trigger: AGACAAAGGGTCTATGGGCCACCCTGGCCCAAAAGG...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTTCTCCTTTCACGCCTaGAAACCCCTGGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFFSFHA*KPLESR
Trigger: CCTGGATTCCAGGGGTTTCCAGGCGTGAAAGGAGAA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAACCAGGTGGTCCTTTTaGCCCAATTGGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSTRWSF*PNWSWR
Trigger: CCTCCAGGACCAATTGGGCCAAAAGGACCACCTGGT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp TTTCTGGGTTTAATGAAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCCCAGCCGTGAGGACATaGAGGAATGTCAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FLGLMKPARNCRNLNSSCPAVRT*RNVSGL
Trigger: CAAACCACTGACATTCCTCCATGTCCTCACGGCTGG...GCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTTCATTAAACCCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CCA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAGAACAGCTGTTCATATaGCTTCATTGGAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTEQLFI*LHWNFR
Trigger: CCTGAAATTCCAATGAAGCCATATGAACAGCTGTTC...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTACTCTTTCACCCATGTaGCCCTTAGGTCCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFTLSPM*PLGPLG
Trigger: ACCTAGAGGACCTAAGGGTCACATGGGTGAAAGAGT...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTCCCCCAAGAGTTTCTaGTTGTGTAGGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFSPKSF*LCRSGV
Trigger: CACTCCAGACCTACACAATCAGAAACTCTTGGGGGA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCATATTTTAGCACGCTGTaGAATTCCAAAGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSYFSTL*NSKVEA
Trigger: GGCTTCAACTTTGGAATTTCACAGCGTGCTAAAATA...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAAGTCCTGGAAACCCCTaGTCACCCTTAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSSPGNP*SPLEPL
Trigger: CAGTGGTTCTAAGGGTGAGCAGGGGTTTCCAGGACT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACCCTTACATAAGGTATaGACCGACATTTATGGAATG +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSPLHKV*TDIYGM
Trigger: CATTCCATAAATGTCGGTGCATACCTTATGTAAGGG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCGTACCTGGAAAACCTTaGTCTCCCTTAGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFVPGKP*SPLGPG
Trigger: TCCTGGACCTAAGGGAGACCAAGGTTTTCCAGGTAC...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCATCCTGGGTCTCCCTTTaGCCCCGTTTTACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSSWVSL*PRFTSS
Trigger: AGAAGAGGTAAAACGGGGCCAAAGGGAGACCCAGGA...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTTGTCCCCTATTACGTaGGATATCTCTGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFLSPIT*DISEGP
Trigger: CGGGCCTTCAGAGATATCCCACGTAATAGGGGACAA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAAAATCCTGGAAGACCTaGAGGGCCTCTGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSKSWKT*RASDSW
Trigger: CCAGGAATCAGAGGCCCTCCAGGTCTTCCAGGATTT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp TTTCTGGGTTTAATGAAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCTGGCCCTGGGCTTCCTaGAAGGGAGATAATCTTAAG +
Preference number: 4 (lower is better)
Translates to: FLGLMKPARNCRNLNSSCWPWAS*KGDNLK
Trigger: CTTAAGATTATCTCCCTTCCAGGAAGCCCAGGGCCA...GCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTTCATTAAACCCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTACTTGCCCCTCAGGCTaGAGTGTTTCACCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFTCPSG*SVSPFS
Trigger: AGAAAAAGGTGAAACACTTCAGCCTGAGGGGCAAGT...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTCCAGGACAACCCAGTaGTCCTTTTGTACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFSRTTQ*SFCTWK
Trigger: TTTCCAGGTACAAAAGGATCACTGGGTTGTCCTGGA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTCACGTTCCTCTTCCATaGCATTCTAGAAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFHVPLP*HSRNGL
Trigger: CAGCCCATTTCTAGAATGTCATGGAAGAGGAACGTG...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGCCCAGATCACAGAACTaGCTTGAAAGAATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLPRSQN*LERIAL
Trigger: CAAAGCAATTCTTTCAAGTCAGTTCTGTGATCTGGG...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCCCCGGGGTCGCCTTTTaGATCAAGTTCTATATCTTC +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFPGVAF*IKFYIF
Trigger: GAAGATATAGAACTTGATGCAAAAGGCGACCCCGGG...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp AAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCACGTTCCTCTTCCATAGTGTCTTTTCTTCATaGACACCTGACAGCGACTTA +
Preference number: 4 (lower is better)
Translates to: KPARNCRNLNSSCTFLFHSVFSS*TPDSDL
Trigger: TAAGTCGCTGTCAGGTGTGCATGAAGAAAAGACACT...ATGGAAGAGGAACGTGCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCATTTGTGAATAGTTGCTaGTTTGCCACAGAGAACTTT +
Preference number: 4 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSFVNSC*FATENF
Trigger: AAAGTTCTCTGTGGCAAAGCAGCAACTATTCACAAA...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTATTGCCTCTTTCTCCTaGAAAACCTGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFIASFS*KTWCSW
Trigger: CCAGGAACACCAGGTTTTCCAGGAGAAAGAGGCAAT...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTCCTCTTTGACCCAGTaGTCCCATTTCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFSSLTQ*SHFTLM
Trigger: CATCAAGGTGAAATGGGACCACTGGGTCAAAGAGGA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCGTCCTGGAGGTCCAATaGATCCTAGAAATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFVLEVQ*ILEIQD
Trigger: ATCCTGGATTTCTAGGATCCATTGGACCTCCAGGAC...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp TTTCTGGGTTTAATGAAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCATGGAGGAATGTCAGTaGTTTGGCTGTGAACGGCTA +
Preference number: 4 (lower is better)
Translates to: FLGLMKPARNCRNLNSSCMEECQ*FGCERL
Trigger: TAGCCGTTCACAGCCAAACCACTGACATTCCTCCAT...GCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTTCATTAAACCCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR TCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCATTCCTGCGAATCCTTTaGGACCTGGTTCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSFLRIL*DLVLLC
Trigger: ACAAAGGAGAACCAGGTCTCAAAGGATTCGCAGGAA...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp AAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCACGTTCCTCTTCCATGAAACTGTAGGAATTTaGATAGTAGTTGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: KPARNCRNLNSSCTFLFHETVGI*IVVARS
Trigger: GGAACGTGCAACTACTATTCAAATTCCTACAGTTTC...ATGGAAGAGGAACGTGCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR GCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTCAGTTCTATACACAATaGTCCAGGATACCACATGCC +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFQFYTQ*SRIPHA
Trigger: GGCATGTGGTATCCTGGAGCATTGTGTATAGAACTG...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp TCAATCCAGAAATGGGTTCGAAAAAGAGTCACAGCACAGTGTTGTAGTTTGAATTTTTCCTTTAGAACCTaGCATGCCCATGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SIQKWVRKRVTAQCCSLNFSFRT*HAHVPH
Trigger: ATGGGGAACATGGGCATGCCAGGTTCTAAAGGAAAA...ATTCAAACTACAACACTGTGCTGTGACTCTTTTTCGAACCCATTTCTGGATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTGTCTGTGCTGTCCTCTaGGTCATGTTTTTCACTTAC +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFVCAVL*VMFFTY
Trigger: GTAAGTGAAAAACATGACCCAGAGGACAGCACAGAC...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCATTGACAGCAAACACGTaGGCAGTGAAGGATGTAAAC +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSLTANT*AVKDVN
Trigger: GTTTACATCCTTCACTGCTCACGTGTTTGCTGTCAA...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTAGTGTCTTTTCTTCATaGACACCTGACAGCGACTTA +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFSVFSS*TPDSDL
Trigger: TAAGTCGCTGTCAGGTGTGCATGAAGAAAAGACACT...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp TCAATCCAGAAATGGGTTCGAAAAAGAGTCACAGCACAGTGTTGTAGTTTGAATACACTTGGAAAACACTaGAAGAAGATAGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SIQKWVRKRVTAQCCSLNTLGKH*KKIAIH
Trigger: GTGGATGGCTATCTTCTTCCAGTGTTTTCCAAGTGT...ATTCAAACTACAACACTGTGCTGTGACTCTTTTTCGAACCCATTTCTGGATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp GTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGAAAAGAAGATTCGAAGATTCAGACACTTaGAAAACACTGGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: VGWALIQCEWCLYKKRRFEDSDT*KTLEED
Trigger: ATCTTCTTCCAGTGTTTTCCAAGTGTCTGAATCTTC...GAATCTTCTTTTCTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTGTCATAATATTCTGTTaGACCACGAAATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFVIIFC*TTKSWR
Trigger: CCTCCAGGATTTCGTGGTCCAACAGAATATTATGAC...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTAGGAAATCCAATTCCTaGAATTCCTGGTTCACCATC +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFRKSNS*NSWFTI
Trigger: GATGGTGAACCAGGAATTCCAGGAATTGGATTTCCT...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAACCTCTTATACCCATTaGTCCAGGAGATCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSTSYTH*SRRSWK
Trigger: TTTCCAGGATCTCCTGGACCAATGGGTATAAGAGGT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGTTGTCTCTTTGTGTCTaGACTCTAAGACTCATCAAA +
Preference number: 4 (lower is better)
Translates to: TENFETAQIRDPDHRTDLLSLCV*TLRLIK
Trigger: TTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAA...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
3UTR CAA 72 bp CTCCACCTAGGTAGATCAAAAAGCATCTTCAAAGCTTaGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAA +
Preference number: 4 (lower is better)
Translates to: LHLGRSKSIFKA*SLCVWTLRLIK
Trigger: TTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTGAAGATGCTTTTTGATCTACCTAGGTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CCA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTATGCACCGACATTTATaGAATGAGGATAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFMHRHL*NEDKVH
Trigger: GTGCACTTTATCCTCATTCCATAAATGTCGGTGCAT...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGAAACTGTAGGAATTTaGATAGTAGTTGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSETVGI*IVVARS
Trigger: GGAACGTGCAACTACTATTCAAATTCCTACAGTTTC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR TCA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTCTTTCATGGATTATTaGACTGCTCCCTTACATAAG +
Preference number: 4 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFSFMDY*TAPLHK
Trigger: CTTATGTAAGGGAGCAGTTCAATAATCCATGAAAGA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR GCA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCACTTTGTCTCCTTTTATaGCTATTACATGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSLCLLL*LLHDSL
Trigger: CAGGGAGTCATGTAATAGGCATAAAAGGAGACAAAG...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 90 bp GCGGCAGCAGGAGCACCTGCGGCCTGGGGGCGGTCCGGGCGCTCATaGTGGGCGCGCGCTCAGAGCCTGGGCGAGTCCGGGGACCCTCAG +
Preference number: 5 (lower is better)
Translates to: AAAGAPAAWGRSGRS*WARAQSLGESGDPQ
Trigger: CTGAGGGTCCCCGGACTCGCCCAGGCTCTGAGCGCGCGCCCACCATGAGCGCCCGGACCGCCCCCAGGCCGCAGGTGCTCCTGCTGCCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 90 bp CCTGGGGGCGGTCCGGGCGCTCATGGTGGGCGCGCGCTCAGAGCCTaGGCGAGTCCGGGGACCCTCAGGCTCTCAGGCCACCGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: PGGGPGAHGGRALRA*ASPGTLRLSGHRVS
Trigger: GGAGACGCGGTGGCCTGAGAGCCTGAGGGTCCCCGGACTCGCCCAGGCTCTGAGCGCGCGCCCACCATGAGCGCCCGGACCGCCCCCAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ATCCACAAGCCAAGAACAGGGGCCCCACAAGAAACCAACGCTGCCGACAGCTTGGTCCTGGATCCCCCGTaGGTCCCGGTGGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: IHKPRTGAPQETNAADSLVLDPP*VPVVLA
Trigger: GGCCAGGACCACCGGGACCAACGGGGGATCCAGGAC...CAAGCTGTCGGCAGCGTTGGTTTCTTGTGGGGCCCCTGTTCTTGGCTTGTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS TCA 90 bp GAGTTCCAGGAATTCCATCCAAGCCCTTTCTCCCAGGTTGGCCTCTaGGCCCCGGGTCACCTGGGACACCCACTTGCCCCTCAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: EFQEFHPSPFSQVGL*APGHLGHPLAPQAE
Trigger: TTCAGCCTGAGGGGCAAGTGGGTGTCCCAGGTGACCCGGGGCTCAGAGGCCAACCTGGGAGAAAGGGCTTGGATGGAATTCCTGGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS GCA 90 bp TGCTTCCTGGTATACCACGCAGTCCTGGTTCTCCAGGATTCCCAGTaGTGCCCAAATCTCCTCTGGGGCCTGGTGGTCCTGCTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: CFLVYHAVLVLQDSQ*CPNLLWGLVVLLVR
Trigger: CCGGACCAGCAGGACCACCAGGCCCCAGAGGAGATTTGGGCAGCACTGGGAATCCTGGAGAACCAGGACTGCGTGGTATACCAGGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304990.8
ENST00000396578.8
ENST00000487633.1
CDS CCA 90 bp TCCTGTCTGGCCAGGGATAATTGCACCGGGCAGACCTGGTGGCCCTaGGAATCCTTCTATGCCTGTGGGTCCTCGAGGTCCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: SCLARDNCTGQTWWP*ESFYACGSSRSSIS
Trigger: GGAGATGCTGGACCTCGAGGACCCACAGGCATAGAAGGATTCCCAGGGCCACCAGGTCTGCCCGGTGCAATTATCCCTGGCCAGACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CCA 90 bp GCACCTGGGCTTCCTCTTGAGCCTGGTGGACCACGATTTCCTGTCTaGCCAGGGATAATTGCACCGGGCAGACCTGGTGGCCCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: APGLPLEPGGPRFPV*PGIIAPGRPGGPGN
Trigger: ATTCCCAGGGCCACCAGGTCTGCCCGGTGCAATTATCCCTGGCCAGACAGGAAATCGTGGTCCACCAGGCTCAAGAGGAAGCCCAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CCA 90 bp ACCACGATTTCCTGTCTGGCCAGGGATAATTGCACCGGGCAGACCTaGTGGCCCTGGGAATCCTTCTATGCCTGTGGGTCCTCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: TTISCLARDNCTGQT*WPWESFYACGSSRS
Trigger: GGACCTCGAGGACCCACAGGCATAGAAGGATTCCCAGGGCCACCAGGTCTGCCCGGTGCAATTATCCCTGGCCAGACAGGAAATCGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS TCA 90 bp CCAGGGTGGCCCATAGACCCTTTGTCTCCTTTTATGCCTATTACATaGCTCCCTGGAGGTCCAGGGGGACCAGGCGCACCTGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: PGWPIDPLSPFMPIT*LPGGPGGPGAPGLP
Trigger: AGGAAGCCCAGGTGCGCCTGGTCCCCCTGGACCTCCAGGGAGTCATGTAATAGGCATAAAAGGAGACAAAGGGTCTATGGGCCACCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS GCA 90 bp AGCCATCCACAAGCCAAGAACAGGGGCCCCACAAGAAACCAACGCTaGCGACAGCTTGATCACAGACTCGGAGCTGCTGGAACTGGGAGG +
Preference number: 5 (lower is better)
Translates to: SHPQAKNRGPTRNQR*RQLDHRLGAAGTGR
Trigger: CCTCCCAGTTCCAGCAGCTCCGAGTCTGTGATCAAGCTGTCGGCAGCGTTGGTTTCTTGTGGGGCCCCTGTTCTTGGCTTGTGGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS CCA 90 bp TGCTCCCAGACGACCTGGTGGTCCCATGTCTCCTGCAGTTCCAGGTaGACCTTTTGGGCCAGGGTGGCCCATAGACCCTTTGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: CSQTTWWSHVSCSSR*TFWARVAHRPFVSF
Trigger: AAAGGAGACAAAGGGTCTATGGGCCACCCTGGCCCAAAAGGTCCACCTGGAACTGCAGGAGACATGGGACCACCAGGTCGTCTGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CCA 90 bp CTGGGCACCTGGGAAACCTGGAAATCCTGGAAGACCTGTATTTCCTaGGGACCCTGGGCTTCCTTTCAAGCCAGCTGCGCCTTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LGTWETWKSWKTCIS*GPWASFQASCALSS
Trigger: GGAAGACAAGGCGCAGCTGGCTTGAAAGGAAGCCCAGGGTCCCCAGGAAATACAGGTCTTCCAGGATTTCCAGGTTTCCCAGGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAGGGACCACTGGGACCTaGTGGGCCACGAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEGTTGT*WATSSS
Trigger: AGAGGAGCTCGTGGCCCACAAGGTCCCAGTGGTCCC...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS TCA 90 bp TCCTGGATCCCCCGTTGGTCCCGGTGGTCCTGGCCTTGTACCTTCTaGATAACCTGGCTCTCCCTTATCTCCCTGGAGACCATGAATACC +
Preference number: 5 (lower is better)
Translates to: SWIPRWSRWSWPCTF*ITWLSLISLETMNT
Trigger: GGTATTCATGGTCTCCAGGGAGATAAGGGAGAGCCAGGTTATTCAGAAGGTACAAGGCCAGGACCACCGGGACCAACGGGGGATCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304990.8
ENST00000396578.8
CDS CCA 90 bp TGGCTCTCCCTTATCTCCCTGGAGACCATGAATACCTGGGAGGCCTaGTCTTCCTGCTCGACCTGGGAATCCCAAAGTTCCCCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: WLSLISLETMNTWEA*SSCSTWESQSSPFS
Trigger: GGAAAAAGGGGAACTTTGGGATTCCCAGGTCGAGCAGGAAGACCAGGCCTCCCAGGTATTCATGGTCTCCAGGGAGATAAGGGAGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304990.8
ENST00000396578.8
ENST00000487633.1
CDS CCA 90 bp CTTCTGCCTTGTTGCCCTTTCAATCCATTTAAGCCTGGAAGTCCTTaGGCTCCCCTGGGACCCTCTATGCACCTTCCTGGGGGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: LLPCCPFNPFKPGSP*APLGPSMHLPGGPC
Trigger: ACAAGGACCCCCAGGAAGGTGCATAGAGGGTCCCAGGGGAGCCCAAGGACTTCCAGGCTTAAATGGATTGAAAGGGCAACAAGGCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCGGCTCCAGGAACTCCTaGCGTGCCCTGGAGACCAGG +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTGSRNS*RALETR
Trigger: CCTGGTCTCCAGGGCACGCAAGGAGTTCCTGGAGCC...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCACTGCTGGTTCTCCCTaGGCTCCTGGGAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTTAGSP*APGRPG
Trigger: GCCAGGCCTCCCAGGAGCCAAGGGAGAACCAGCAGT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATCTCCTTGTTCCCCCTaGGCTCCTGGGGTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSESPCSP*APGVPL
Trigger: GAGAGGAACCCCAGGAGCCAAGGGGGAACAAGGAGA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 90 bp CCTTTTTCCTTTAGAACCTGGCATGCCCATGTTCCCCATGCTTCCTaGTATACCACGCAGTCCTGGTTCTCCAGGATTCCCAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: PFSFRTWHAHVPHAS*YTTQSWFSRIPSAA
Trigger: GGCAGCACTGGGAATCCTGGAGAACCAGGACTGCGTGGTATACCAGGAAGCATGGGGAACATGGGCATGCCAGGTTCTAAAGGAAAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304990.8
ENST00000396578.8
ENST00000487633.1
CDS-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAGGTCCGGGTAGTCCTTaGAGGCCCTTTAAACCTGGC +
Preference number: 5 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEGPGSP*RPFKPG
Trigger: GCCAGGTTTAAAGGGCCTCAAAGGACTACCCGGACC...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAAACCCCTGTTGCCCTaGACTCCCTCACTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSEKPLLP*TPSLPG
Trigger: CCCTGGAAGTGAGGGAGTCAAGGGCAACAGGGGTTT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS TCA 90 bp TGGCCTATATACCGTTGGTCCCGGTGGTCCTGGCCTTGTACCTTCTaGATAACCTGGCTCTCCCTTATCTCCCTGGAGACCATGAATACC +
Preference number: 5 (lower is better)
Translates to: WPIYRWSRWSWPCTF*ITWLSLISLETMNT
Trigger: GGTATTCATGGTCTCCAGGGAGATAAGGGAGAGCCAGGTTATTCAGAAGGTACAAGGCCAGGACCACCGGGACCAACGGTATATAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487633.1
CDS CCA 90 bp AGGGAGTCCAATTTCTCCATGTTCCCCAGAATTGCCTCTTTCTCCTaGAAAACCTGGTGTTCCTGGTCCTCCAGGCATGGCTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: RESNFSMFPRIASFS*KTWCSWSSRHGYCW
Trigger: CCAGCAGTAGCCATGCCTGGAGGACCAGGAACACCAGGTTTTCCAGGAGAAAGAGGCAATTCTGGGGAACATGGAGAAATTGGACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 90 bp ATATCTCTGAAGGCCCGGGATTTCCTTTATCTCCTTGTTCCCCCTTaGCTCCTGGGGTTCCTCTCTGGCCCTTTACTCCTGGAATTCCAG +
Preference number: 5 (lower is better)
Translates to: ISLKARDFLYLLVPP*LLGFLSGPLLLEFQ
Trigger: CTGGAATTCCAGGAGTAAAGGGCCAGAGAGGAACCCCAGGAGCCAAGGGGGAACAAGGAGATAAAGGAAATCCCGGGCCTTCAGAGATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACACCTGGGCTTCCTCTaGAGCCTGGTGGACCACGAT +
Preference number: 5 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTHLGFL*SLVDHD
Trigger: ATCGTGGTCCACCAGGCTCAAGAGGAAGCCCAGGTG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp AGTGCTTGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATTGCCTGGCTTACCTCTaGGCCCACAGGGTCCTAGGT +
Preference number: 5 (lower is better)
Translates to: SACPVPSEPALVNMMNENCLAYL*AHRVLG
Trigger: ACCTAGGACCCTGTGGGCCAAGAGGTAAGCCAGGCA...ATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCAAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CAA 90 bp AAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCACGTTCCTCTTCCATAGGGGAGGCCAGTGCTaGCCCGGTGCCCTCAGAACC +
Preference number: 5 (lower is better)
Translates to: KPARNCRNLNSSCTFLFHRGGQC*PGALRT
Trigger: GGTTCTGAGGGCACCGGGCAAGCACTGGCCTCCCCT...ATGGAAGAGGAACGTGCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATGTAGCCAGCCGTACTaGGTAACTGCCTGCGGAGTT +
Preference number: 5 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSECSQPY*VTACGV
Trigger: AACTCCGCAGGCAGTTACCAAGTACGGCTGGCTACA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAGCAGGAGCACCCTTTaGTCCTTTCAAACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSESRSTL*SFQTSS
Trigger: GCTGCTGGTTTGAAAGGACAAAAGGGTGCTCCTGCT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCCAGGGAAACCCCTGTaGCCCTTGACTCCCTCACTT +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTPGKPL*PLTPSL
Trigger: AAGTGAGGGAGTCAAGGGCAACAGGGGTTTCCCTGG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAACCTGGGACACCCACTaGCCCCTCAGGCTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSTWDTH*PLRLKC
Trigger: ACACTTCAGCCTGAGGGGCAAGTGGGTGTCCCAGGT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGTTCCTCTTCCATGACATTCTAGAAATGGGCTGGCTCGGAATTCTTCCAGGCCCTGGTTTTCCATCCTaGCCTGGCTTACCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: TFLFHDILEMGWLGILPGPGFPS*PGLPLG
Trigger: GCCAAGAGGTAAGCCAGGCAAGGATGGAAAACCAGG...GCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAAGAGGAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS CCA 90 bp AATTTCTCCATGTTCCCCAGAATTGCCTCTTTCTCCTGGAAAACCTaGTGTTCCTGGTCCTCCAGGCATGGCTACTGCTGGTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: NFSMFPRIASFSWKT*CSWSSRHGYCWFSL
Trigger: AAGGGAGAACCAGCAGTAGCCATGCCTGGAGGACCAGGAACACCAGGTTTTCCAGGAGAAAGAGGCAATTCTGGGGAACATGGAGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 90 bp GTTTCTCCCTTTTCTCCGGCTGGACCAGGAATTCCATCACGTCCTTaGTCACCTCTTATACCCATTGGTCCAGGAGATCCTGGAAATCCT +
Preference number: 5 (lower is better)
Translates to: VSPFSPAGPGIPSRP*SPLIPIGPGDPGNP
Trigger: AGGATTTCCAGGATCTCCTGGACCAATGGGTATAAGAGGTGACCAAGGACGTGATGGAATTCCTGGTCCAGCCGGAGAAAAGGGAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCAAGCCAGCTGCGCCTaGTCTTCCTGGGATTCCTTT +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTQASCA*SSWDSF
Trigger: AAAGGAATCCCAGGAAGACAAGGCGCAGCTGGCTTG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTGCCCTTTCTCCCAGGTaGGCCTCTGAGCCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFALSPR*ASEPRV
Trigger: GACCCGGGGCTCAGAGGCCAACCTGGGAGAAAGGGC...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACACTCTCGTTGTCCAGGTaGCAGGTGATCCACTGTCTC +
Preference number: 5 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTLSLSR*QVIHCL
Trigger: GAGACAGTGGATCACCTGCAACCTGGACAACGAGAG...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCAGGGGAGGCCAGTGCTaGCCCGGTGCCCTCAGAACC +
Preference number: 5 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFRGGQC*PGALRT
Trigger: GGTTCTGAGGGCACCGGGCAAGCACTGGCCTCCCCT...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 90 bp CCTGCGAATCCTTTGAGACCTGGTTCTCCTTTGTCCCCTATTACGTaGGATATCTCTGAAGGCCCGGGATTTCCTTTATCTCCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: PANPLRPGSPLSPIT*DISEGPGFPLSPCS
Trigger: GGAACAAGGAGATAAAGGAAATCCCGGGCCTTCAGAGATATCCCACGTAATAGGGGACAAAGGAGAACCAGGTCTCAAAGGATTCGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCATTCCCCTTACACCTTaGGAACCCGTGAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTIPLTP*EPVSPG
Trigger: TCCAGGACTCACGGGTTCCAAAGGTGTAAGGGGAAT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCTGTACCTGGAAAACCTaGGTCTCCCTTAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTCTWKT*VSLRSR
Trigger: CCTGGACCTAAGGGAGACCAAGGTTTTCCAGGTACA...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGTGCCTGGCTTACCTCTaGGCCCACAGGGTCCTAGGT +
Preference number: 5 (lower is better)
Translates to: TENFETAQIRDPDHRTDLCLAYL*AHRVLG
Trigger: ACCTAGGACCCTGTGGGCCAAGAGGTAAGCCAGGCA...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp TGCCCGGTGCCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATCCTTTCCAGTGCATCAAGGTCTaGTCCGTGGGCTCGTTGATT +
Preference number: 5 (lower is better)
Translates to: CPVPSEPALVNMMNENPFQCIKV*SVGSLI
Trigger: AATCAACGAGCCCACGGACAAGACCTTGATGCACTG...GAAAGGATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGGCACCGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS TCA 90 bp GGCTATGGCGATCGCAGGACCTTCACAAACAGTGCATCTGTAACATaGAACAAAGACTATGGCGGCATTGCCACTTTCTGCACTGTCATG +
Preference number: 5 (lower is better)
Translates to: GYGDRRTFTNSASVT*NKDYGGIATFCTVM
Trigger: CATGACAGTGCAGAAAGTGGCAATGCCGCCATAGTCTTTGTTTCATGTTACAGATGCACTGTTTGTGAAGGTCCTGCGATCGCCATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684413.1
CDS-3UTR CAA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAAGTCCTGGAAAGCCCTaGGGTCCCTGCGGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSSPGKP*GPCGPG
Trigger: GCCTGGACCGCAGGGACCCAAGGGCTTTCCAGGACT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCATTTCCTTTATCTCCTaGTTCCCCCTTGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTISFIS*FPLGSW
Trigger: CCAGGAGCCAAGGGGGAACAAGGAGATAAAGGAAAT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCAGACCTGGTTCTCCTTaGTCCCCTATTACGTGGGAT +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTRPGSP*SPITWD
Trigger: ATCCCACGTAATAGGGGACAAAGGAGAACCAGGTCT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAGGGCCCAGGAGGCCTTaGATTCCTTTAAAACCCAAA +
Preference number: 5 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTGPRRP*IPLKPK
Trigger: TTTGGGTTTTAAAGGAATCAAAGGCCTCCTGGGCCC...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATTCCATCACGTCCTaGGTCACCTCTTATACCCAT +
Preference number: 5 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSENSITS*VTSYTH
Trigger: ATGGGTATAAGAGGTGACCAAGGACGTGATGGAATT...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CCAAATTCATATGCTGAAGTCCTAACCTTCAGTACTTCGGAACATGACTCTGTAGGTCCGGGTAGTCCTTaGAGGCCCTTTAAACCTGGC +
Preference number: 5 (lower is better)
Translates to: PNSYAEVLTFSTSEHDSVGPGSP*RPFKPG
Trigger: GCCAGGTTTAAAGGGCCTCAAAGGACTACCCGGACC...TACAGAGTCATGTTCCGAAGTACTGAAGGTTAGGACTTCAGCATATGAATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CAA 90 bp GTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGAAAAGAAGATTCCCGGTGGTCCTGGCCTaGTACCTTCTGAATAACCTG +
Preference number: 5 (lower is better)
Translates to: VGWALIQCEWCLYKKRRFPVVLA*YLLNNL
Trigger: CAGGTTATTCAGAAGGTACAAGGCCAGGACCACCGG...GAATCTTCTTTTCTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATGTCATAATATTCTGTaGGACCACGAAATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSECHNIL*DHEILE
Trigger: CTCCAGGATTTCGTGGTCCAACAGAATATTATGACA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCAGGCCTGGTTCTCCTTaGGGCCCATCAACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFRPGSP*GPSTPG
Trigger: CCCAGGAGTTGATGGGCCCAAAGGAGAACCAGGCCT...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGAGACCAGGTTCTCCTaGGGGTCCGTAGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSETRFS*GSVARW
Trigger: CCACCTGGCTACGGACCCCAAGGAGAACCTGGTCTC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGTTCCTGGGTCTCCCTTaGGCCCCGTTTTACCTCTTC +
Preference number: 5 (lower is better)
Translates to: TENFETAQIRDPDHRTDLFLGLP*APFYLF
Trigger: GAAGAGGTAAAACGGGGCCAAAGGGAGACCCAGGAA...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCGTGCCTGGGACATGCTaGGTGCTGAATAAGATGATA +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTVPGTC*VLNKMI
Trigger: TATCATCTTATTCAGCACCAAGCATGTCCCAGGCAC...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCCTGCGGAGTTGTTGCTaGGGTATTTGTCTAGAACAG +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTLRSCC*GICLEQ
Trigger: CTGTTCTAGACAAATACCCAAGCAACAACTCCGCAG...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCATCCCCTGGAGGACCTaGGTCCCCTTTCTCACCACT +
Preference number: 5 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFIPWRT*VPFLTT
Trigger: AGTGGTGAGAAAGGGGACCAAGGTCCTCCAGGGGAT...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAAACCCAGTGATCCTTTaGTACCTGGAAAACCTTGGT +
Preference number: 5 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTNPVIL*YLENLG
Trigger: ACCAAGGTTTTCCAGGTACAAAAGGATCACTGGGTT...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCGTCTCCTTTGGCTCCTaGAGCACCAGGGTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFVSFGS*STRVPS
Trigger: AGAGGGAACCCTGGTGCTCAAGGAGCCAAAGGAGAC...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCACGTAGTGACAGTGCCTaGGATGTAAGTGGAATAGGT +
Preference number: 5 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSRSDSA*DVSGIG
Trigger: ACCTATTCCACTTACATCCAAGGCACTGTCACTACG...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACCTCAGTTCAGTTCTGTGTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAATTGTTGCTTGGGTATTaGTCTAGAACAGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: TSVQFCVPSGLTVLSRSELLLGY*SRTGFL
Trigger: GAGAAAACCTGTTCTAGACAAATACCCAAGCAACAA...TTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 90 bp CAGGACCTTCACAAACAGTGCATCTGTAACATGAAACAAAGACTATaGCGGCATTGCCACTTTCTGCACTGTCATGTGCTGCCTTTCATT +
Preference number: 5 (lower is better)
Translates to: QDLHKQCICNMKQRL*RHCHFLHCHVLPFI
Trigger: AATGAAAGGCAGCACATGACAGTGCAGAAAGTGGCAATGCCGCCATAGTCTTTGTTTCATGTTACAGATGCACTGTTTGTGAAGGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684413.1
CDS-3UTR CAA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCCCGGTGGTCCTGGCCTaGTACCTTCTGAATAACCTG +
Preference number: 5 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFPVVLA*YLLNNL
Trigger: CAGGTTATTCAGAAGGTACAAGGCCAGGACCACCGG...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp TCAATCCAGAAATGGGTTCGAAAAAGAGTCACAGCACAGTGTTGTAGTTTGAATTCCAGGTGGGCCAGGTaGCCCCATTTCTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: SIQKWVRKRVTAQCCSLNSRWAR*PHFSFL
Trigger: AAGAAAGGAGAAATGGGGCAACCTGGCCCACCTGGA...ATTCAAACTACAACACTGTGCTGTGACTCTTTTTCGAACCCATTTCTGGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CAA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTCCAGGTGGGCCAGGTaGCCCCATTTCTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFSRWAR*PHFSFL
Trigger: AAGAAAGGAGAAATGGGGCAACCTGGCCCACCTGGA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTGTCCTTTTGGCCCAATaGGTCCTGGAGGTCCAATGG +
Preference number: 5 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFVLLAQ*VLEVQW
Trigger: CCATTGGACCTCCAGGACCAATTGGGCCAAAAGGAC...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCACACCAGGTGGTCCTTTaGGCCCAATTGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSHQVVL*AQLVLE
Trigger: CTCCAGGACCAATTGGGCCAAAAGGACCACCTGGTG...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp TTTCTGGGTTTAATGAAGCCAGCCAGAAACTGTAGGAATTTGAATAGTAGTTGCCTCTCGTTGTCCAGGTaGCAGGTGATCCACTGTCTC +
Preference number: 5 (lower is better)
Translates to: FLGLMKPARNCRNLNSSCLSLSR*QVIHCL
Trigger: GAGACAGTGGATCACCTGCAACCTGGACAACGAGAG...GCAACTACTATTCAAATTCCTACAGTTTCTGGCTGGCTTCATTAAACCCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CAA 90 bp GATGGAATAGGCTTTCTGAACATTCTTTCTGGGTTTAATGAAGCCAGCCAGAAAAGACAAAGCCTCTCGTaGTCCAGGTTGCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: DGIGFLNILSGFNEASQKRQSLS*SRLQVI
Trigger: GATCACCTGCAACCTGGACAACGAGAGGCTTTGTCT...TTTCTGGCTGGCTTCATTAAACCCAGAAAGAATGTTCAGAAAGCCTATTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CAA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAGCATCAGAGCTGGTGTaGACAGCCAGTATGAATAAT +
Preference number: 5 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSASELV*TASMNN
Trigger: ATTATTCATACTGGCTGTCAACACCAGCTCTGATGC...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GATGGAATAGGCTTTCTGAACATTCTTTCTGGGTTTAATGAAGCCAGCCAGAAAAGGAATGTCAGTGGTTaGGCTGTGAACGGCTATGGC +
Preference number: 5 (lower is better)
Translates to: DGIGFLNILSGFNEASQKRNVSG*AVNGYG
Trigger: GCCATAGCCGTTCACAGCCAAACCACTGACATTCCT...TTTCTGGCTGGCTTCATTAAACCCAGAAAGAATGTTCAGAAAGCCTATTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CAA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACATTGCCACAGAGAACTTaGAAACAGCACAGATTAGAG +
Preference number: 5 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTLPQRT*KQHRLE
Trigger: CTCTAATCTGTGCTGTTTCAAAGTTCTCTGTGGCAA...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGTCCAGAGACCACACTTaGAGAACTACTGGCCTACAG +
Preference number: 5 (lower is better)
Translates to: TENFETAQIRDPDHRTDLSRDHT*RTTGLQ
Trigger: CTGTAGGCCAGTAGTTCTCAAAGTGTGGTCTCTGGA...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTCTCCAGGTGGACCCTaGCGAAAAACGATGTCACCT +
Preference number: 5 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFSPGGP*RKTMSP
Trigger: AGGTGACATCGTTTTTCGCAAGGGTCCACCTGGAGA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACAGAGAACTTTGAAACAGCACAGATTAGAGACCCAGATCACAGAACTGACTTGCCATGTTCCCCAGAATaGCCTCTTTCTCCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: TENFETAQIRDPDHRTDLPCSPE*PLSPGK
Trigger: TTTTCCAGGAGAAAGAGGCAATTCTGGGGAACATGG...CAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCATTTACCTCTTCTGCCTaGTTGCCCTTTCAATCCATT +
Preference number: 5 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSFTSSA*LPFQSI
Trigger: AATGGATTGAAAGGGCAACAAGGCAGAAGAGGTAAA...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCACCTGGTTTTCCATCCTaGCCTGGCTTACCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSPGFPS*PGLPLG
Trigger: GCCAAGAGGTAAGCCAGGCAAGGATGGAAAACCAGG...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCAGGAATGTCAGTGGTTaGGCTGTGAACGGCTATGGC +
Preference number: 5 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFRNVSG*AVNGYG
Trigger: GCCATAGCCGTTCACAGCCAAACCACTGACATTCCT...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS GCA 90 bp CACAAACAGTGCATCTGTAACATGAAACAAAGACTATGGCGGCATTaGCACTTTCTGCACTGTCATGTGCTGCCTTTCATTCCATTACAA +
Preference number: 5 (lower is better)
Translates to: HKQCICNMKQRLWRH*HFLHCHVLPFIPLQ
Trigger: TTGTAATGGAATGAAAGGCAGCACATGACAGTGCAGAAAGTGGCAATGCCGCCATAGTCTTTGTTTCATGTTACAGATGCACTGTTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684413.1
CDS-3UTR CAA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTCTCCCTTTTCCCCCTaGAGGTCCGTTCTGTTATCT +
Preference number: 5 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFSPFSP*RSVLLS
Trigger: AGATAACAGAACGGACCTCAAGGGGGAAAAGGGAGA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCTGGTCCCATTTCACCTaGATGACCTGGAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFWSHFT*MTWNSW
Trigger: CCAGGAATTCCAGGTCATCAAGGTGAAATGGGACCA...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTCCTGGATATCCTCTTaGACCCAGTGGTCCCATTTC +
Preference number: 5 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFSWISS*TQWSHF
Trigger: GAAATGGGACCACTGGGTCAAAGAGGATATCCAGGA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAAGACAAAGCCTCTCGTaGTCCAGGTTGCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSRQSLS*SRLQVI
Trigger: GATCACCTGCAACCTGGACAACGAGAGGCTTTGTCT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp ACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAATGCTCCAGGATACCAATCATGTGGTGGGCTaGGTAAAACATAGATATTTC +
Preference number: 5 (lower is better)
Translates to: TVLSRSENPVLYTMLQDTNHVVG*VKHRYF
Trigger: GAAATATCTATGTTTTACCAAGCCCACCACATGATT...GGTATCCTGGAGCATTGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GTTCCATCAGGCCTTACGGTCCTCAGCAGGTCTGAAAATCCAGTTCTATACACAGTTCATATGGCTTCATaGGAATTTCAGGTTTTAGCA +
Preference number: 5 (lower is better)
Translates to: VPSGLTVLSRSENPVLYTVHMAS*EFQVLA
Trigger: TGCTAAAACCTGAAATTCCAATGAAGCCATATGAAC...TGTGTATAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp AAAATGAGGTCAGTAGGGTGGGCCCTAATCCAATGTGAGTGGTGTCTTTATAAGAGAAGATTCAGACACTaGGAAAACACTGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: KMRSVGWALIQCEWCLYKRRFRH*ENTGRR
Trigger: TCTTCTTCCAGTGTTTTCCAAGTGTCTGAATCTTCT...CTTATAAAGACACCACTCACATTGGATTAGGGCCCACCCTACTGACCTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CAA 90 bp GAATTTAAATATCAGCACCACCAACTCCACCTAGGTAGATCAAAAAGCATCTTCACCCGGGGTCGCCTTTaGCATCAAGTTCTATATCTT +
Preference number: 5 (lower is better)
Translates to: EFKYQHHQLHLGRSKSIFTRGRL*HQVLYL
Trigger: AAGATATAGAACTTGATGCAAAAGGCGACCCCGGGT...GAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTGATATTTAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTTTCCTGCGAATCCTTaGAGACCTGGTTCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFFPANP*RPGSPL
Trigger: CAAAGGAGAACCAGGTCTCAAAGGATTCGCAGGAAA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCACACCTCTTATACCCATaGGTCCAGGAGATCCTGGAA +
Preference number: 5 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSHLLYP*VQEILE
Trigger: TTCCAGGATCTCCTGGACCAATGGGTATAAGAGGTG...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAAAGAGTTCCAAGGTCTaGTCCGTGGGCTCGTTGATT +
Preference number: 5 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSKSSKV*SVGSLI
Trigger: AATCAACGAGCCCACGGACAAGACCTTGGAACTCTT...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp GGTAACTGCCTGCGGAGTTGTTGCTTGGGTATTTGTCTAGAACAGGTTTTCTCAAGAAACTGTAGGAATTaGAATAGTAGTTGCACGTTC +
Preference number: 5 (lower is better)
Translates to: GNCLRSCCLGICLEQVFSRNCRN*NSSCTF
Trigger: GAACGTGCAACTACTATTCAAATTCCTACAGTTTCT...TGAGAAAACCTGTTCTAGACAAATACCCAAGCAACAACTCCGCAGGCAGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS TCA 90 bp GTCCTAGGCAAAAACCAACATTGTATTGCATTTTATCATATAGGATaGAAAGTAAGGTGGCCAACCATCCCGTTAACCCAGGACTTTCTC +
Preference number: 5 (lower is better)
Translates to: VLGKNQHCIAFYHIG*KVRWPTIPLTQDFL
Trigger: GAGAAAGTCCTGGGTTAACGGGATGGTTGGCCACCTTACTTTTCATCCTATATGATAAAATGCAATACAATGTTGGTTTTTGCCTAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471862.2
ENST00000684413.1
CDS-3UTR CAA 90 bp CCCTTACATAAGGTATGCACCGACATTTATGGAATGAGGATAAAGTGCACATTTTGGCCCATAGACCCTTaGTCTCCTTTTATGCCTATT +
Preference number: 5 (lower is better)
Translates to: PLHKVCTDIYGMRIKCTFWPIDP*SPFMPI
Trigger: AATAGGCATAAAAGGAGACAAAGGGTCTATGGGCCA...AAATGTGCACTTTATCCTCATTCCATAAATGTCGGTGCATACCTTATGTAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS-3UTR CAA 90 bp TCAATCCAGAAATGGGTTCGAAAAAGAGTCACAGCACAGTGTTGTAGTTTGAATGCACAGTGTTGTAGTTaGAATTGTGTTGTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: SIQKWVRKRVTAQCCSLNAQCCS*NCVVPK
Trigger: TTTGGGGACAACACAATTCAAACTACAACACTGTGC...ATTCAAACTACAACACTGTGCTGTGACTCTTTTTCGAACCCATTTCTGGATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS-3UTR CAA 90 bp CCCTCAGAACCTGCACTTGTGAACATGATGAATGAAAATCCTTTCCAGAGAGAAAGAAACTGTAGGAATTaGAATAGTAGTTGCACGTTC +
Preference number: 5 (lower is better)
Translates to: PSEPALVNMMNENPFQRERNCRN*NSSCTF
Trigger: GAACGTGCAACTACTATTCAAATTCCTACAGTTTCT...TTCTCTCTGGAAAGGATTTTCATTCATCATGTTCACAAGTGCAGGTTCTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS-3UTR CAA 90 bp CAAAGCTTTGTCTCTTTGTGTCTGGACTCTAAGACTCATCAAATAGTGTTATCAGAGTCACCTGTGAGTTaGAACTTTAAAAAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: QSFVSLCLDSKTHQIVLSESPVS*NFKKRH
Trigger: GTGCCTCTTTTTAAAGTTCAAACTCACAGGTGACTC...TGATAACACTATTTGATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS GCA 90 bp ACAAACTTAAGGCATAATCATTCCATTCAGAAGCCTATTACGATATaGTGTGCATATGTAGAGGGGTTAGTTCAATTTCCAAACACCAGT +
Preference number: 5 (lower is better)
Translates to: TNLRHNHSIQKPITI*CAYVEGLVQFPNTS
Trigger: ACTGGTGTTTGGAAATTGAACTAACCCCTCTACATATGCACAGCATATCGTAATAGGCTTCTGAATGGAATGATTATGCCTTAAGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471862.2
ENST00000684413.1
CDS CCA 72 bp GCACCTGCGGCCTGGGGGCGGTCCGGGCGCTCATGGTaGGCGCGCGCTCAGAGCCTGGGCGAGTCCGGGGAC +
Preference number: 6 (lower is better)
Translates to: APAAWGRSGRSW*ARAQSLGESGD
Trigger: GTCCCCGGACTCGCCCAGGCTCTGAGCGCGCGCCCACCATGAGCGCCCGGACCGCCCCCAGGCCGCAGGTGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp GGAGCACCTGCGGCCTGGGGGCGGTCCGGGCGCTCATaGTGGGCGCGCGCTCAGAGCCTGGGCGAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: GAPAAWGRSGRS*WARAQSLGESG
Trigger: CCCGGACTCGCCCAGGCTCTGAGCGCGCGCCCACCATGAGCGCCCGGACCGCCCCCAGGCCGCAGGTGCTCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp GGTCCGGGCGCTCATGGTGGGCGCGCGCTCAGAGCCTaGGCGAGTCCGGGGACCCTCAGGCTCTCAGGCCAC +
Preference number: 6 (lower is better)
Translates to: GPGAHGGRALRA*ASPGTLRLSGH
Trigger: GTGGCCTGAGAGCCTGAGGGTCCCCGGACTCGCCCAGGCTCTGAGCGCGCGCCCACCATGAGCGCCCGGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CAA 90 bp CCTAGGGCCGGCTTCTCCGGGTGGTCCGGGGGCTCCAGGAACTCCTaGCGTGCCCTGGAGACCAGGTTCTCCTTGGGGTCCGTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PRAGFSGWSGGSRNS*RALETRFSLGSVAR
Trigger: CCTGGCTACGGACCCCAAGGAGAACCTGGTCTCCAGGGCACGCAAGGAGTTCCTGGAGCCCCCGGACCACCCGGAGAAGCCGGCCCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS GCA 72 bp GCTTCTCCGGGTGGTCCGGGGGCTCCAGGAACTCCTTaGGTGCCCTGGAGACCAGGTTCTCCTTGGGGTCCG +
Preference number: 6 (lower is better)
Translates to: ASPGGPGAPGTP*VPWRPGSPWGP
Trigger: CGGACCCCAAGGAGAACCTGGTCTCCAGGGCACGCAAGGAGTTCCTGGAGCCCCCGGACCACCCGGAGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp AACACTGAGCTCTCCCCTAGGGCCGGCTTCTCCGGGTaGTCCGGGGGCTCCAGGAACTCCTTGCGTGCCCTG +
Preference number: 6 (lower is better)
Translates to: NTELSPRAGFSG*SGGSRNSLRAL
Trigger: CAGGGCACGCAAGGAGTTCCTGGAGCCCCCGGACCACCCGGAGAAGCCGGCCCTAGGGGAGAGCTCAGTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CAA 72 bp GGCTTCTCCGGGTGGTCCGGGGGCTCCAGGAACTCCTaGCGTGCCCTGGAGACCAGGTTCTCCTTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: GFSGWSGGSRNS*RALETRFSLGS
Trigger: GGACCCCAAGGAGAACCTGGTCTCCAGGGCACGCAAGGAGTTCCTGGAGCCCCCGGACCACCCGGAGAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS GCA 72 bp CACCGGGCAGACCTGGTGGCCCTGGGAATCCTTCTATaGCTGTGGGTCCTCGAGGTCCAGCATCTCCCATGG +
Preference number: 6 (lower is better)
Translates to: HRADLVALGILL*LWVLEVQHLPW
Trigger: CCATGGGAGATGCTGGACCTCGAGGACCCACAGGCATAGAAGGATTCCCAGGGCCACCAGGTCTGCCCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CCA 72 bp AGCACTGGCCTTTGTCTTTACAGACACAACCCTTGCTaGCTGCGGGCGCCGCCGCCAGGAGCACCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: STGLCLYRHNPC*LRAPPPGAPAG
Trigger: TCCTGCTGGTGCTCCTGGCGGCGGCGCCCGCAGCCAGCAAGGGTTGTGTCTGTAAAGACAAAGGCCAGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp CTTGGCTCCTGGGGTTCCTCTCTGGCCCTTTACTCCTaGAATTCCAGGGCTCCCCCTCTGCCCTGGTGTGCC +
Preference number: 6 (lower is better)
Translates to: LGSWGSSLALYS*NSRAPPLPWCA
Trigger: GGCACACCAGGGCAGAGGGGGAGCCCTGGAATTCCAGGAGTAAAGGGCCAGAGAGGAACCCCAGGAGCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS TCA 72 bp CAGGGGCCCCACAAGAAACCAACGCTGCCGACAGCTTaGTCACAGACTCGGAGCTGCTGGAACTGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: QGPHKKPTLPTA*SQTRSCWNWEA
Trigger: GGCCTCCCAGTTCCAGCAGCTCCGAGTCTGTGATCAAGCTGTCGGCAGCGTTGGTTTCTTGTGGGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS CCA 72 bp CTTTCTCCCAGGTTGGCCTCTGAGCCCCGGGTCACCTaGGACACCCACTTGCCCCTCAGGCTGAAGTGTTTC +
Preference number: 6 (lower is better)
Translates to: LSPRLASEPRVT*DTHLPLRLKCF
Trigger: GAAACACTTCAGCCTGAGGGGCAAGTGGGTGTCCCAGGTGACCCGGGGCTCAGAGGCCAACCTGGGAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp GCCAGGGATAATTGCACCGGGCAGACCTGGTGGCCCTaGGAATCCTTCTATGCCTGTGGGTCCTCGAGGTCC +
Preference number: 6 (lower is better)
Translates to: ARDNCTGQTWWP*ESFYACGSSRS
Trigger: GGACCTCGAGGACCCACAGGCATAGAAGGATTCCCAGGGCCACCAGGTCTGCCCGGTGCAATTATCCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CAA 90 bp CACCCGGCAGTCCTGGATCCCCCGTTGGTCCCGGTGGTCCTGGCCTaGTACCTTCTGAATAACCTGGCTCTCCCTTATCTCCCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: HPAVLDPPLVPVVLA*YLLNNLALPYLPGD
Trigger: GTCTCCAGGGAGATAAGGGAGAGCCAGGTTATTCAGAAGGTACAAGGCCAGGACCACCGGGACCAACGGGGGATCCAGGACTGCCGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304990.8
ENST00000396578.8
CDS CAA 90 bp GGCAGTCCTGAGGGTCCAGGAGGTCCAGGCTCGCCCATTGCTCCCTaGTCTCCCTTTTCCCCCTTGAGGTCCGTTCTGTTATCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: GSPEGPGGPGSPIAP*SPFSPLRSVLLSGP
Trigger: TGGCCCAGATAACAGAACGGACCTCAAGGGGGAAAAGGGAGACAAGGGAGCAATGGGCGAGCCTGGACCTCCTGGACCCTCAGGACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS GCA 72 bp TACCACGCAGTCCTGGTTCTCCAGGATTCCCAGTGCTaGCCAAATCTCCTCTGGGGCCTGGTGGTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: YHAVLVLQDSQC*PNLLWGLVVLL
Trigger: CAGCAGGACCACCAGGCCCCAGAGGAGATTTGGGCAGCACTGGGAATCCTGGAGAACCAGGACTGCGTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304990.8
ENST00000396578.8
ENST00000487633.1
CDS CCA 72 bp GTTCCAGGAATTCCATCCAAGCCCTTTCTCCCAGGTTaGCCTCTGAGCCCCGGGTCACCTGGGACACCCACT +
Preference number: 6 (lower is better)
Translates to: VPGIPSKPFLPG*PLSPGSPGTPT
Trigger: AGTGGGTGTCCCAGGTGACCCGGGGCTCAGAGGCCAACCTGGGAGAAAGGGCTTGGATGGAATTCCTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp TCCTGTCTGGCCAGGGATAATTGCACCGGGCAGACCTaGTGGCCCTGGGAATCCTTCTATGCCTGTGGGTCC +
Preference number: 6 (lower is better)
Translates to: SCLARDNCTGQT*WPWESFYACGS
Trigger: GGACCCACAGGCATAGAAGGATTCCCAGGGCCACCAGGTCTGCCCGGTGCAATTATCCCTGGCCAGACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CAA 72 bp ACAGGGGCCCCACAAGAAACCAACGCTGCCGACAGCTaGATCACAGACTCGGAGCTGCTGGAACTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: TGAPQETNAADS*ITDSELLELGG
Trigger: GCCTCCCAGTTCCAGCAGCTCCGAGTCTGTGATCAAGCTGTCGGCAGCGTTGGTTTCTTGTGGGGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS TCA 72 bp CCCCGTTGGTCCCGGTGGTCCTGGCCTTGTACCTTCTaGATAACCTGGCTCTCCCTTATCTCCCTGGAGACC +
Preference number: 6 (lower is better)
Translates to: PRWSRWSWPCTF*ITWLSLISLET
Trigger: GGTCTCCAGGGAGATAAGGGAGAGCCAGGTTATTCAGAAGGTACAAGGCCAGGACCACCGGGACCAACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304990.8
ENST00000396578.8
CDS GCA 72 bp GTATACCACGCAGTCCTGGTTCTCCAGGATTCCCAGTaGTGCCCAAATCTCCTCTGGGGCCTGGTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: VYHAVLVLQDSQ*CPNLLWGLVVL
Trigger: CAGGACCACCAGGCCCCAGAGGAGATTTGGGCAGCACTGGGAATCCTGGAGAACCAGGACTGCGTGGTATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304990.8
ENST00000396578.8
ENST00000487633.1
CDS GCA 72 bp GATAGCCTGGCAGTCCGTGATCTCCAGGTGGACCCTTaGGAAAAACGATGTCACCTGGCGGTCCTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: DSLAVRDLQVDP*EKRCHLAVLEV
Trigger: GACCTCCAGGACCGCCAGGTGACATCGTTTTTCGCAAGGGTCCACCTGGAGATCACGGACTGCCAGGCTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS GCA 72 bp TGGTGGACCACGATTTCCTGTCTGGCCAGGGATAATTaGACCGGGCAGACCTGGTGGCCCTGGGAATCCTTC +
Preference number: 6 (lower is better)
Translates to: WWTTISCLARDN*TGQTWWPWESF
Trigger: GAAGGATTCCCAGGGCCACCAGGTCTGCCCGGTGCAATTATCCCTGGCCAGACAGGAAATCGTGGTCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CCA 72 bp CTTCCTCTTGAGCCTGGTGGACCACGATTTCCTGTCTaGCCAGGGATAATTGCACCGGGCAGACCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: LPLEPGGPRFPV*PGIIAPGRPGG
Trigger: GCCACCAGGTCTGCCCGGTGCAATTATCCCTGGCCAGACAGGAAATCGTGGTCCACCAGGCTCAAGAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CCA 72 bp ACGACCTGGTGGTCCCATGTCTCCTGCAGTTCCAGGTaGACCTTTTGGGCCAGGGTGGCCCATAGACCCTTT +
Preference number: 6 (lower is better)
Translates to: TTWWSHVSCSSR*TFWARVAHRPF
Trigger: AAAGGGTCTATGGGCCACCCTGGCCCAAAAGGTCCACCTGGAACTGCAGGAGACATGGGACCACCAGGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CAA 90 bp AAGCCAAGAACAGGGGCCCCACAAGAAACCAACGCTGCCGACAGCTaGATCACAGACTCGGAGCTGCTGGAACTGGGAGGCCAGGACTTC +
Preference number: 6 (lower is better)
Translates to: KPRTGAPQETNAADS*ITDSELLELGGQDF
Trigger: GAAGTCCTGGCCTCCCAGTTCCAGCAGCTCCGAGTCTGTGATCAAGCTGTCGGCAGCGTTGGTTTCTTGTGGGGCCCCTGTTCTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS GCA 72 bp CAAGCCAAGAACAGGGGCCCCACAAGAAACCAACGCTaGCGACAGCTTGATCACAGACTCGGAGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: QAKNRGPTRNQR*RQLDHRLGAAG
Trigger: TCCAGCAGCTCCGAGTCTGTGATCAAGCTGTCGGCAGCGTTGGTTTCTTGTGGGGCCCCTGTTCTTGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304990.8
CDS CCA 72 bp CCCTTTGTCTCCTTTTATGCCTATTACATGACTCCCTaGAGGTCCAGGGGGACCAGGCGCACCTGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: PFVSFYAYYMTP*RSRGTRRTWAS
Trigger: GGAAGCCCAGGTGCGCCTGGTCCCCCTGGACCTCCAGGGAGTCATGTAATAGGCATAAAAGGAGACAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CAA 72 bp TTCTCCCCTTTGGCCCCGTCACAGAAGCACTGGCCTTaGTCTTTACAGACACAACCCTTGCTGGCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: FSPLAPSQKHWP*SLQTQPLLAAG
Trigger: GCCCGCAGCCAGCAAGGGTTGTGTCTGTAAAGACAAAGGCCAGTGCTTCTGTGACGGGGCCAAAGGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CAA 72 bp GAGTTCCTGGTTTTCCATCCTTGCCTGGCTTACCTCTaGGCCCACAGGGTCCTAGGTTTCCAGGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: EFLVFHPCLAYL*AHRVLGFQVAL
Trigger: CAGGGCCACCTGGAAACCTAGGACCCTGTGGGCCAAGAGGTAAGCCAGGCAAGGATGGAAAACCAGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396578.8
ENST00000469504.2
CDS CAA 72 bp TCTCCAGCTGGTCCAGGAGTTCCTGGTTTTCCATCCTaGCCTGGCTTACCTCTTGGCCCACAGGGTCCTAGG +
Preference number: 6 (lower is better)
Translates to: SPAGPGVPGFPS*PGLPLGPQGPR
Trigger: CCTAGGACCCTGTGGGCCAAGAGGTAAGCCAGGCAAGGATGGAAAACCAGGAACTCCTGGACCAGCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396578.8
ENST00000469504.2
ENST00000471862.2
ENST00000684413.1
CDS TCA 72 bp TACCGTTGGTCCCGGTGGTCCTGGCCTTGTACCTTCTaGATAACCTGGCTCTCCCTTATCTCCCTGGAGACC +
Preference number: 6 (lower is better)
Translates to: YRWSRWSWPCTF*ITWLSLISLET
Trigger: GGTCTCCAGGGAGATAAGGGAGAGCCAGGTTATTCAGAAGGTACAAGGCCAGGACCACCGGGACCAACGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487633.1
CDS GCA 72 bp ATCCTGGTACACCGACAAGTCCGTAAGGCCCGGTATTaGCTGGGGTGCCTGGAAGTCCAGGAGAACCAGAAA +
Preference number: 6 (lower is better)
Translates to: ILVHRQVRKARY*LGCLEVQENQK
Trigger: TTTCTGGTTCTCCTGGACTTCCAGGCACCCCAGGCAATACCGGGCCTTACGGACTTGTCGGTGTACCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp TGGAAACCCCTGCTCACCCTTAGAACCACTGCATCCTaGTACACCGACAAGTCCGTAAGGCCCGGTATTGCC +
Preference number: 6 (lower is better)
Translates to: WKPLLTLRTTAS*YTDKSVRPGIA
Trigger: GGCAATACCGGGCCTTACGGACTTGTCGGTGTACCAGGATGCAGTGGTTCTAAGGGTGAGCAGGGGTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp TGGGAAACCTGGAAATCCTGGAAGACCTGTATTTCCTaGGGACCCTGGGCTTCCTTTCAAGCCAGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: WETWKSWKTCIS*GPWASFQASCA
Trigger: GGCGCAGCTGGCTTGAAAGGAAGCCCAGGGTCCCCAGGAAATACAGGTCTTCCAGGATTTCCAGGTTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS TCA 72 bp CCCATAGACCCTTTGTCTCCTTTTATGCCTATTACATaGCTCCCTGGAGGTCCAGGGGGACCAGGCGCACCT +
Preference number: 6 (lower is better)
Translates to: PIDPLSPFMPIT*LPGGPGGPGAP
Trigger: AGGTGCGCCTGGTCCCCCTGGACCTCCAGGGAGTCATGTAATAGGCATAAAAGGAGACAAAGGGTCTATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396578.8
ENST00000468753.5
ENST00000471862.2
CDS CCA 72 bp CATGTTCCCCATGCTTCCTGGTATACCACGCAGTCCTaGTTCTCCAGGATTCCCAGTGCTGCCCAAATCTCC +
Preference number: 6 (lower is better)
Translates to: HVPHASWYTTQS*FSRIPSAAQIS
Trigger: GGAGATTTGGGCAGCACTGGGAATCCTGGAGAACCAGGACTGCGTGGTATACCAGGAAGCATGGGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304990.8
ENST00000396578.8
ENST00000487633.1
CDS CCA 72 bp TCAATCCATTTAAGCCTGGAAGTCCTTGGGCTCCCCTaGGACCCTCTATGCACCTTCCTGGGGGTCCTTGTT +
Preference number: 6 (lower is better)
Translates to: SIHLSLEVLGLP*DPLCTFLGVLV
Trigger: AACAAGGACCCCCAGGAAGGTGCATAGAGGGTCCCAGGGGAGCCCAAGGACTTCCAGGCTTAAATGGATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp TGTTGCCCTTTCAATCCATTTAAGCCTGGAAGTCCTTaGGCTCCCCTGGGACCCTCTATGCACCTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: CCPFNPFKPGSP*APLGPSMHLPG
Trigger: CCCAGGAAGGTGCATAGAGGGTCCCAGGGGAGCCCAAGGACTTCCAGGCTTAAATGGATTGAAAGGGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp ATGGAGGAATGTCAGTGGTTTGGCTGTGAACGGCTATaGCGATCGCAGGACCTTCACAAACAGTGCATCTGC +
Preference number: 6 (lower is better)
Translates to: MEECQWFGCERL*RSQDLHKQCIC
Trigger: GCAGATGCACTGTTTGTGAAGGTCCTGCGATCGCCATAGCCGTTCACAGCCAAACCACTGACATTCCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396578.8
ENST00000471862.2
ENST00000643388.1
ENST00000683077.1
CDS CAA 72 bp CTTTTCTCCGGCTGGACCAGGAATTCCATCACGTCCTaGGTCACCTCTTATACCCATTGGTCCAGGAGATCC +
Preference number: 6 (lower is better)
Translates to: LFSGWTRNSITS*VTSYTHWSRRS
Trigger: GGATCTCCTGGACCAATGGGTATAAGAGGTGACCAAGGACGTGATGGAATTCCTGGTCCAGCCGGAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CAA 90 bp CGTTTCTCCCTTTTCTCCGGCTGGACCAGGAATTCCATCACGTCCTaGGTCACCTCTTATACCCATTGGTCCAGGAGATCCTGGAAATCC +
Preference number: 6 (lower is better)
Translates to: RFSLFSGWTRNSITS*VTSYTHWSRRSWKS
Trigger: GGATTTCCAGGATCTCCTGGACCAATGGGTATAAGAGGTGACCAAGGACGTGATGGAATTCCTGGTCCAGCCGGAGAAAAGGGAGAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CAA 90 bp AATATTTCAGTGGCCTATATACCGTTGGTCCCGGTGGTCCTGGCCTaGTACCTTCTGAATAACCTGGCTCTCCCTTATCTCCCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: NISVAYIPLVPVVLA*YLLNNLALPYLPGD
Trigger: GTCTCCAGGGAGATAAGGGAGAGCCAGGTTATTCAGAAGGTACAAGGCCAGGACCACCGGGACCAACGGTATATAGGCCACTGAAATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487633.1
CDS TCA 72 bp GGTGAAGACAAAGCCTCTCGTTGTCCAGGTTGCAGGTaGTCCACTGTCTCCACGTTTTCCTTTCAAACCTGG +
Preference number: 6 (lower is better)
Translates to: GEDKASRCPGCR*STVSTFSFQTW
Trigger: CCAGGTTTGAAAGGAAAACGTGGAGACAGTGGATCACCTGCAACCTGGACAACGAGAGGCTTTGTCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396578.8
ENST00000469504.2
ENST00000471862.2
ENST00000684413.1
CDS TCA 72 bp ACTGTCCCCTCTGGACATGAAGGAATTGCTGTGGTTTaGCTGTGTCGGGTGAAGACAAAGCCTCTCGTTGTC +
Preference number: 6 (lower is better)
Translates to: TVPSGHEGIAVV*LCRVKTKPLVV
Trigger: GACAACGAGAGGCTTTGTCTTCACCCGACACAGTCAAACCACAGCAATTCCTTCATGTCCAGAGGGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396578.8
ENST00000469504.2
ENST00000471862.2
ENST00000643388.1
ENST00000684413.1
CDS TCA 72 bp AAACCCACTGTAGAGTGGCACTGTCCCCTCTGGACATaGAGGAATTGCTGTGGTTTGACTGTGTCGGGTGAA +
Preference number: 6 (lower is better)
Translates to: KPTVEWHCPLWT*RNCCGLTVSGE
Trigger: TTCACCCGACACAGTCAAACCACAGCAATTCCTTCATGTCCAGAGGGGACAGTGCCACTCTACAGTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396578.8
ENST00000469504.2
ENST00000471862.2
ENST00000643388.1
ENST00000684413.1
CDS GCA 72 bp GTCCAGGGAGTCCAATTTCTCCATGTTCCCCAGAATTaGCTCTTTCTCCTGGAAAACCTGGTGTTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: VQGVQFLHVPQN*LFLLENLVFLV
Trigger: GACCAGGAACACCAGGTTTTCCAGGAGAAAGAGGCAATTCTGGGGAACATGGAGAAATTGGACTCCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp AATTTCTCCATGTTCCCCAGAATTGCCTCTTTCTCCTaGAAAACCTGGTGTTCCTGGTCCTCCAGGCATGGC +
Preference number: 6 (lower is better)
Translates to: NFSMFPRIASFS*KTWCSWSSRHG
Trigger: GCCATGCCTGGAGGACCAGGAACACCAGGTTTTCCAGGAGAAAGAGGCAATTCTGGGGAACATGGAGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CCA 72 bp ATGGAGGAATGTCAGTGGTTTGGCTGTGAACGGCTATaGCGATCGCAGGACCTTCACAAACAGTGCATCAAG +
Preference number: 6 (lower is better)
Translates to: MEECQWFGCERL*RSQDLHKQCIK
Trigger: CTTGATGCACTGTTTGTGAAGGTCCTGCGATCGCCATAGCCGTTCACAGCCAAACCACTGACATTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469504.2
CDS CCA 72 bp ATGGAGGAATGTCAGTGGTTTGGCTGTGAACGGCTATaGCGATCGCAGGACCTTCACAAACAGTGCATCTGT +
Preference number: 6 (lower is better)
Translates to: MEECQWFGCERL*RSQDLHKQCIC
Trigger: ACAGATGCACTGTTTGTGAAGGTCCTGCGATCGCCATAGCCGTTCACAGCCAAACCACTGACATTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000682257.1
ENST00000684413.1
ENST00000684724.1
CDS CCA 72 bp TTTACAATCTGCATGTGGAACAGCACAACTGGCAACTaGGACTGGGACATTACCAAGGTCTTGTCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: FTICMWNSTTGN*DWDITKVLSVG
Trigger: GCCCACGGACAAGACCTTGGTAATGTCCCAGTCCCAGTTGCCAGTTGTGCTGTTCCACATGCAGATTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684413.1
CDS CAA 72 bp GGATTTCCTGCGAATCCTTTGAGACCTGGTTCTCCTTaGTCCCCTATTACGTGGGATATCTCTGAAGGCCCG +
Preference number: 6 (lower is better)
Translates to: GFPANPLRPGSP*SPITWDISEGP
Trigger: CGGGCCTTCAGAGATATCCCACGTAATAGGGGACAAAGGAGAACCAGGTCTCAAAGGATTCGCAGGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CAA 72 bp GAGTTCCTGGTTTTCCATCCTTGCCTGGCTTACCTCTaGGCCCACAGGGTCCTAGGCAAAAACCAACATTGT +
Preference number: 6 (lower is better)
Translates to: EFLVFHPCLAYL*AHRVLGKNQHC
Trigger: ACAATGTTGGTTTTTGCCTAGGACCCTGTGGGCCAAGAGGTAAGCCAGGCAAGGATGGAAAACCAGGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471862.2
ENST00000684413.1
CDS CAA 90 bp CTGGTCCAGGAGTTCCTGGTTTTCCATCCTTGCCTGGCTTACCTCTaGGCCCACAGGGTCCTAGGCAAAAACCAACATTGTATTGCATTT +
Preference number: 6 (lower is better)
Translates to: LVQEFLVFHPCLAYL*AHRVLGKNQHCIAF
Trigger: AAATGCAATACAATGTTGGTTTTTGCCTAGGACCCTGTGGGCCAAGAGGTAAGCCAGGCAAGGATGGAAAACCAGGAACTCCTGGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471862.2
ENST00000684413.1
CDS CCA 72 bp CATGTTGCACACACGGACAGCAGGCAGCATCGACCCTaGGAATCACATTTTACCCAGCACAATGTAACATTC +
Preference number: 6 (lower is better)
Translates to: HVAHTDSRQHRP*ESHFTQHNVTF
Trigger: GAATGTTACATTGTGCTGGGTAAAATGTGATTCCCAGGGTCGATGCTGCCTGCTGTCCGTGTGTGCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683077.1
CDS CAA 72 bp AGTCCAGGGAGTCCAATTTCTCCATGTTCCCCAGAATaGCCTCTTTCTCCTGGAAAACCTGGTGTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: SPGSPISPCSPE*PLSPGKPGVPG
Trigger: ACCAGGAACACCAGGTTTTCCAGGAGAAAGAGGCAATTCTGGGGAACATGGAGAAATTGGACTCCCTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS CAA 72 bp CTGTTTGTAGATTTTCAAGGAAATGTCTATGGCATGTaGCACACACGGACAGCAGGCAGCATCGACCCTGGG +
Preference number: 6 (lower is better)
Translates to: LFVDFQGNVYGM*HTRTAGSIDPG
Trigger: CCCAGGGTCGATGCTGCCTGCTGTCCGTGTGTGCAACATGCCATAGACATTTCCTTGAAAATCTACAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683077.1
CDS CCA 72 bp CCTTTGAGACCTGGTTCTCCTTTGTCCCCTATTACGTaGGATATCTCTGAAGGCCCGGGATTTCCTTTATCT +
Preference number: 6 (lower is better)
Translates to: PLRPGSPLSPIT*DISEGPGFPLS
Trigger: AGATAAAGGAAATCCCGGGCCTTCAGAGATATCCCACGTAATAGGGGACAAAGGAGAACCAGGTCTCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396578.8
CDS GCA 72 bp TGCATCTGTAACATGAAACAAAGACTATGGCGGCATTaGCACTTTCTGCACTGTCATGTGCTGCCTTTCATT +
Preference number: 6 (lower is better)
Translates to: CICNMKQRLWRH*HFLHCHVLPFI
Trigger: AATGAAAGGCAGCACATGACAGTGCAGAAAGTGGCAATGCCGCCATAGTCTTTGTTTCATGTTACAGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684413.1
CDS CAA 90 bp TCTGTGAAGTTGTATCAGCTGTTTCCAAAGCAGTTTACAGGTATTTaGGTTCAACCACTTCCTAGTGATCCAAGTCAATGCTGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: SVKLYQLFPKQFTGI*VQPLPSDPSQCCQS
Trigger: GGACTGGCAGCATTGACTTGGATCACTAGGAAGTGGTTGAACCAAAATACCTGTAAACTGCTTTGGAAACAGCTGATACAACTTCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471862.2
CDS TCA 72 bp TGTCATGTGCTGCCTTTCATTCCATTACAAGGGAAGTaGTTCACTTGGTCCCATTGTAAAACTAGGGGATTG +
Preference number: 6 (lower is better)
Translates to: CHVLPFIPLQGK*FTWSHCKTRGL
Trigger: CAATCCCCTAGTTTTACAATGGGACCAAGTGAATCACTTCCCTTGTAATGGAATGAAAGGCAGCACATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684413.1
CDS CAA 72 bp GTTTCAATTTTCTCTGCCCACACCGAATCTGGGTACTaGTTGATATTTTTCAAGGCACTCACTCCACCACTA +
Preference number: 6 (lower is better)
Translates to: VSIFSAHTESGY*LIFFKALTPPL
Trigger: TAGTGGTGGAGTGAGTGCCTTGAAAAATATCAACAAGTACCCAGATTCGGTGTGGGCAGAGAAAATTGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487633.1
CDS TCA 72 bp TATTCAGACAATCATTTAGAAATAGAGCCCCGAGACTaGCAGTTGTCAGAGGAGATAGACATACCTTTACCT +
Preference number: 6 (lower is better)
Translates to: YSDNHLEIEPRD*QLSEEIDIPLP
Trigger: AGGTAAAGGTATGTCTATCTCCTCTGACAACTGTCAGTCTCGGGGCTCTATTTCTAAATGATTGTCTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471862.2
ENST00000684413.1
CDS GCA 72 bp AGGCATAATCATTCCATTCAGAAGCCTATTACGATATaGTGTGCATATGTAGAGGGGTTAGTTCAATTTCCA +
Preference number: 6 (lower is better)
Translates to: RHNHSIQKPITI*CAYVEGLVQFP
Trigger: TGGAAATTGAACTAACCCCTCTACATATGCACAGCATATCGTAATAGGCTTCTGAATGGAATGATTATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471862.2
ENST00000684413.1
CDS CAA 72 bp GAACAACTGCTTTCAATAGATTCCAAGGTCTTTTATTaGCTGGTCAAGGGTAAAATGAGCTCAATCCTAAGA +
Preference number: 6 (lower is better)
Translates to: EQLLSIDSKVFY*LVKGKMSSILR
Trigger: TCTTAGGATTGAGCTCATTTTACCCTTGACCAGCAAATAAAAGACCTTGGAATCTATTGAAAGCAGTTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471862.2
CDS CAA 90 bp TTATACTATGAACAACTGCTTTCAATAGATTCCAAGGTCTTTTATTaGCTGGTCAAGGGTAAAATGAGCTCAATCCTAAGACTGATTGTG +
Preference number: 6 (lower is better)
Translates to: LYYEQLLSIDSKVFY*LVKGKMSSILRLIV
Trigger: CACAATCAGTCTTAGGATTGAGCTCATTTTACCCTTGACCAGCAAATAAAAGACCTTGGAATCTATTGAAAGCAGTTGTTCATAGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471862.2