RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL27A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000196739

Ensembl transcript IDs: ENST00000356083.8, ENST00000451716.5, ENST00000468565.1, ENST00000477421.2, ENST00000485397.1, ENST00000490831.1, ENST00000494090.6, ENST00000494780.1

Found 1136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCTCGCCAGAGTCGCCCGGCTGGCCTTTGGACCCAGGCTCCCCCTaGTTTCCAGGGAGCCCCGTTCTGCCCTCTGTTCCTCGCTTGCCA +
Preference number: 1 (lower is better)
Translates to: ISPESPGWPLDPGSP*FPGSPVLPSVPRLP
Trigger: TGGCAAGCGAGGAACAGAGGGCAGAACGGGGCTCCCTGGAAACCAGGGGGAGCCTGGGTCCAAAGGCCAGCCGGGCGACTCTGGCGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR TCA 90 bp CCTTTCCCATCAAGCCAGGTGGCCCCCGAGGGCCCTGGATGCCTTTaGAGCCAATGTCTCCAGGCGGGCCCTTGGGTCCGAAGAGACCTG +
Preference number: 1 (lower is better)
Translates to: PFPSSQVAPEGPGCL*SQCLQAGPWVRRDL
Trigger: CAGGTCTCTTCGGACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCCACCTGGCTTGATGGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 90 bp ACGATGCCTTCCTTTCCCATCAAGCCAGGTGGCCCCCGAGGGCCCTaGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTCCG +
Preference number: 1 (lower is better)
Translates to: TMPSFPIKPGGPRGP*MPLKPMSPGGPLGP
Trigger: CGGACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCCACCTGGCTTGATGGGAAAGGAAGGCATCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR GCA 90 bp TGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGGGTCTaGCCAGTGCCCTCCTGCCACACGGTCATGTTAAGGCAGTGGATG +
Preference number: 1 (lower is better)
Translates to: CPFQARKRTACLAGV*PVPSCHTVMLRQWM
Trigger: CATCCACTGCCTTAACATGACCGTGTGGCAGGAGGGCACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR TCA 90 bp AGAGGCCAGTGGATTCTGGCAGCAGGAGGGATCCGAGCGCTGAGATaGGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCC +
Preference number: 1 (lower is better)
Translates to: RGQWILAAGGIRALR*GPSCYKHALPRRAS
Trigger: GGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATCTCAGCGCTCGGATCCCTCCTGCTGCCAGAATCCACTGGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CCA 90 bp GGGGTCTGCCCAGTGCCCTCCTGCCACACGGTCATGTTAAGGCAGTaGATGGTGATGTGCTGGGTCACCTCGGAGCTTAGCAGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: GVCPVPSCHTVMLRQ*MVMCWVTSELSRCR
Trigger: CCTGCACCTGCTAAGCTCCGAGGTGACCCAGCACATCACCATCCACTGCCTTAACATGACCGTGTGGCAGGAGGGCACTGGGCAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR TCA 90 bp GAGACAGAGGCCAGTGGATTCTGGCAGCAGGAGGGATCCGAGCGCTaGGATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAG +
Preference number: 1 (lower is better)
Translates to: ETEASGFWQQEGSER*DEARAATNTHFHAE
Trigger: CTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATCTCAGCGCTCGGATCCCTCCTGCTGCCAGAATCCACTGGCCTCTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CCA 90 bp AAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTaGGGTCTGCCCAGTGCCCTCCTGCCACACGGTCATGTTAAGGCA +
Preference number: 1 (lower is better)
Translates to: KNLSIPGPEAYGLLG*GLPSALLPHGHVKA
Trigger: TGCCTTAACATGACCGTGTGGCAGGAGGGCACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR TCA 90 bp CCATCTTGGACCTTGCAGCCATCCATGGACACCTCGGGCCGGAACTaGCCCCCAGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGT +
Preference number: 1 (lower is better)
Translates to: PSWTLQPSMDTSGRN*PPASKICPFQARKR
Trigger: ACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCTGGGGGTCAGTTCCGGCCCGAGGTGTCCATGGATGGCTGCAAGGTCCAAGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 90 bp GAGGCCACGGGGCTCAGGCAGGTTGCAGGTCCAGCTTACTCTGGCTaGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTC +
Preference number: 1 (lower is better)
Translates to: EATGLRQVAGPAYSG*LFGWSLGLSWDPLF
Trigger: GAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCCGTGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CCA 90 bp CTGAGAGGCCACGGGGCTCAGGCAGGTTGCAGGTCCAGCTTACTCTaGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATT +
Preference number: 1 (lower is better)
Translates to: LRGHGAQAGCRSSLL*LALWLVFGAKLGSI
Trigger: AATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCCGTGGCCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CCA 90 bp ATGTGCTGGGTCACCTCGGAGCTTAGCAGGTGCAGGAAATTCATCTaGACCCGGCTGATGGCAAACTCGACCTTGGAGGCCGTGATGGGC +
Preference number: 1 (lower is better)
Translates to: MCWVTSELSRCRKFI*TRLMANSTLEAVMG
Trigger: GCCCATCACGGCCTCCAAGGTCGAGTTTGCCATCAGCCGGGTCCAGATGAATTTCCTGCACCTGCTAAGCTCCGAGGTGACCCAGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR TCA 90 bp TCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATaGGTGAAGTTGCAGGAGACCTCGATGGTGTCAGAGGAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: STLEAVMGLRHVCPP*VKLQETSMVSEEQP
Trigger: TGGCTGCTCCTCTGACACCATCGAGGTCTCCTGCAACTTCACTCATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR GCA 90 bp GTCAGAGGTCAGAGGAAGCACGCAGGTCCAACTTCCAGGCGGTACTaGTTCCCTGATGAGGCAGGAGGGAGGTTGTCCACACTGATGATG +
Preference number: 1 (lower is better)
Translates to: VRGQRKHAGPTSRRY*FPDEAGGRLSTLMM
Trigger: CATCATCAGTGTGGACAACCTCCCTCCTGCCTCATCAGGGAAGCAGTACCGCCTGGAAGTTGGACCTGCGTGCTTCCTCTGACCTCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 90 bp GGGGCTCAGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTaGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCAAGGAC +
Preference number: 1 (lower is better)
Translates to: GAQAGCRSSLLWLAL*LVFGAKLGSIVPKD
Trigger: GTCCTTGGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR TCA 90 bp AGGACCTCGGAAGAGGCGATGCGGCTTCCTGAGATGGTTCCATGTTaGTGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTG +
Preference number: 1 (lower is better)
Translates to: RTSEEAMRLPEMVPC*CFTSKPSPDPTPLL
Trigger: CAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAGGAAGCCGCATCGCCTCTTCCGAGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR GCA 90 bp GTGCCCTCCTGCCACACGGTCATGTTAAGGCAGTGGATGGTGATGTaGTGGGTCACCTCGGAGCTTAGCAGGTGCAGGAAATTCATCTGG +
Preference number: 1 (lower is better)
Translates to: VPSCHTVMLRQWMVM*WVTSELSRCRKFIW
Trigger: CCAGATGAATTTCCTGCACCTGCTAAGCTCCGAGGTGACCCAGCACATCACCATCCACTGCCTTAACATGACCGTGTGGCAGGAGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 90 bp CTCAGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTaGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCAAGGACACCC +
Preference number: 1 (lower is better)
Translates to: LRQVAGPAYSGWLFG*SLGLSWDPLFPRTP
Trigger: GGGTGTCCTTGGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR TCA 90 bp CATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATaGGACAGAGGCCAGTGGATTCTGGCAGCAGGAGGGATCCGAGCG +
Preference number: 1 (lower is better)
Translates to: HVDRDVNEDSRKTQE*DRGQWILAAGGIRA
Trigger: CGCTCGGATCCCTCCTGCTGCCAGAATCCACTGGCCTCTGTCTCATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CCA 90 bp AACCAGCTCTTCTTGGTCATGCTGAAGGTAGATCGTCTCACCTCCTaGGACAAGAATCAGCCAGGTGGGCTGTGTCCAGGGGATCCTTCT +
Preference number: 1 (lower is better)
Translates to: NQLFLVMLKVDRLTS*DKNQPGGLCPGDPS
Trigger: AGAAGGATCCCCTGGACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCATGACCAAGAAGAGCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR GCA 90 bp AGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTTCATATGAGCTATaGACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTC +
Preference number: 1 (lower is better)
Translates to: RAQVHLWSLACSYEL*TGKAWYVEAAQTRV
Trigger: GACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAAACTCCAGAGGTGGACCTGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR TCA 90 bp AGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTTCATATaGGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAAC +
Preference number: 1 (lower is better)
Translates to: SKQSPGPPLEFGMFI*AMHGQSLVCRSCSN
Trigger: GTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR CCA 90 bp GCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTGATTaGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: ASPLSLALTQRRFCD*FLQGQVFTQDLSRA
Trigger: TGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CCA 90 bp CTCTGGAGTTTGGCATGTTCATATGAGCTATGCACGGGCAAAGCCTaGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGTTGCAGAG +
Preference number: 1 (lower is better)
Translates to: LWSLACSYELCTGKA*YVEAAQTRVQLVAE
Trigger: CTCTGCAACCAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAAACTCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR TCA 90 bp TCAAGCGCCGACTTGTTCGCTGATGTAGCACAATTCAGAGGACGCTaGACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTC +
Preference number: 1 (lower is better)
Translates to: SSADLFADVAQFRGR*TSLWCRTPRFPLLF
Trigger: GAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGCGTCCTCTGAATTGTGCTACATCAGCGAACAAGTCGGCGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR TCA 90 bp ACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTaGCCCAAATTTACACTTGGAGCTAATGACAATGGGTTTCTACAG +
Preference number: 1 (lower is better)
Translates to: TMVSNSEIPIIILSP*PKFTLGANDNGFLQ
Trigger: CTGTAGAAACCCATTGTCATTAGCTCCAAGTGTAAATTTGGGTCAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTCCTGGCTCTCCCCGTTaGCCAATGAGGCCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGPGSPR*PMRPCS
Trigger: GGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGG...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCCTGCCCAAGGACCCTTaGGCAGGGGAGCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPLPKDP*AGELPL
Trigger: GAGAGGCAGCTCCCCTGCCCAAGGGTCCTTGGGCAG...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGACGGCCCGGTCTGCCCTaGGGTCCTGGAGGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGRPGLP*GPGGPF
Trigger: GAAGGGCCCTCCAGGACCCCAGGGCAGACCGGGCCG...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGAGGGCCCGGTTCTCCTaGGAGGCCCTTGGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPRARFS*EALGAW
Trigger: CCAGGCACCAAGGGCCTCCCAGGAGAACCGGGCCCT...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGTGCCCAATGAGGCCCTaGTCCCCAGGAGTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPCPMRP*SPGVPR
Trigger: CCTGGGCACTCCTGGGGAGCAGGGCCTCATTGGGCA...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCGGGTCCCATCTCTCCTaGAGGCCCAATTGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPGSHLS*RPNWPL
Trigger: CAGGGGCCAATTGGGCCTCCAGGAGAGATGGGACCC...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCGAGGGATCCGAGCGCTaGGATGAGGCCCGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAEGSER*DEARAA
Trigger: AGCAGCTCGGGCCTCATCTCAGCGCTCGGATCCCTC...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCTTTCCACGGAGGCCTTaGACACCCTCCTGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPFPRRP*TPSCPG
Trigger: CCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAA...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCGGAAGCGTACGGCCTaGTTGGCTGGGGTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: GGSKRGHPQPEDLAASHARKRTA*LAGVCP
Trigger: TGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGCTTCCCACGCCTGGCTaGTCCTTCCCATCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPLPTPG*SFPSSH
Trigger: GTGAGAGGATGGGAAGGAGCAGCCAGGCGTGGGAAG...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCAGGGCCAAGCCAACATaGTTCGCACCCAGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: GGSKRGHPQPEDLAASHARAKPT*FAPRPP
Trigger: GGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCT...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCCTGGCTTCCCCCGTaGACCGGGGAACCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFPWLPP*TGEPWQ
Trigger: TTGCCAGGGTTCCCCGGTGCACGGGGGAAGCCAGGG...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCTCACCAGCCACACCCTaGTGTCCAGGCCGGCCCGGT +
Preference number: 2 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFSPATP*CPGRPG
Trigger: ACCGGGCCGGCCTGGACAGCAGGGTGTGGCTGGTGA...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGACACCAGGCGGCCCCTTaGGTCCCATCTCTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGHQAAP*VPSLLE
Trigger: CTCCAGGAGAGATGGGACCCAAGGGGCCGCCTGGTG...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGGAATCCGGGATCTCCTaGCACACCTGGAACCCCTTG +
Preference number: 2 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPESGIS*HTWNPL
Trigger: CAAGGGGTTCCAGGTGTGTCAGGAGATCCCGGATTC...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGGGGAGCTGCCTCTCCTaGAGCCATCTGCCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: GPSCYKHALPRRASRLGRGSCLS*SHLPLS
Trigger: ACTGAGGGGCAGATGGCTCCAGGAGAGGCAGCTCCC...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGCCCACCCACTTCTACTaGGCAGACAACAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPPTHFY*ADNSWG
Trigger: ACCCCAGCTGTTGTCTGCCCAGTAGAAGTGGGTGGG...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCGGCTGGCTCTTTGGTTaGTCTTTGGGGCTAAGCTGG +
Preference number: 2 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPGWLFG*SLGLSW
Trigger: CCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCC...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCCCGACCAGGATCCCCTaGTTCCCCCTTCACGCCATC +
Preference number: 2 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPPTRIP*FPLHAI
Trigger: GATGGCGTGAAGGGGGAACCAGGGGATCCTGGTCGG...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GCTTTCCACGGAGGCCTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGATCCTGGAGGACCCTaGGGTCCAGGCTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: AFHGGLAHPPVQGTQGLPDPGGP*GPGSPG
Trigger: CCCTGGAGAGCCTGGACCCCAGGGTCCTCCAGGATC...CGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCCCCTTCCTGCCAGGCTaGCCCTCCAAGCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: TLWPECSTGVHPRLESCPPFLPG*PSKPGA
Trigger: GGCCCCTGGCTTGGAGGGTCAGCCTGGCAGGAAGGG...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCCTGGCATTCCAGGATaGCCTCCTTACCATCGACCC +
Preference number: 2 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAPGIPG*PPYHRP
Trigger: GGGTCGATGGTAAGGAGGTCATCCTGGAATGCCAGG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGAGGCCCTGGATGCCTTTaGAGCCAATGTCTCCAGGCG +
Preference number: 2 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGGPGCL*SQCLQA
Trigger: CGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCC...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGCTTCCCACGCCTGGCTaGTCCTTCCCATCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: GPSCYKHALPRRASRLGRLPTPG*SFPSSH
Trigger: GTGAGAGGATGGGAAGGAGCAGCCAGGCGTGGGAAG...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGACGAGGGGCCCGACGATaGCTTCCTTTCCCATCAAGC +
Preference number: 2 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGRGARR*LPFPSS
Trigger: GCTTGATGGGAAAGGAAGGCATCGTCGGGCCCCTCG...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCCTCTGGCTGGCTCTTTaGTTGGTCTTTGGGGCTAAG +
Preference number: 2 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPLWLAL*LVFGAK
Trigger: CTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTGCCCGGGAAACCCAATaGATCCTTTGTCTCCGACTT +
Preference number: 2 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGARETQ*ILCLRL
Trigger: AAGTCGGAGACAAAGGATCCATTGGGTTTCCCGGGC...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGCCCCTGGCGGCCCCATaGGTCCCTCATCTCCCTCGG +
Preference number: 2 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPEPLAAP*VPHLPR
Trigger: CCGAGGGAGATGAGGGACCCATGGGGCCGCCAGGGG...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCAAGATCTCTCCTCCCTaGTCCAGCACCAGCCGGTCT +
Preference number: 2 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAKISPP*SSTSRS
Trigger: AGACCGGCTGGTGCTGGACCAGGGAGGAGAGATCTT...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTGGGGCTCAGGCAGGTTaGAGGTCCAGCTTACTCTGG +
Preference number: 2 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGGAQAG*RSSLLW
Trigger: CCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCC...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGATTGCCGTCCTCGCCCTaGTCCCCCTTTTCGCCTTTT +
Preference number: 2 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGLPSSP*SPFSPF
Trigger: AAAAGGCGAAAAGGGGGAGCAGGGCGAGGACGGCAA...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGAGCCCCTGCCTTGCCTTaGTTTCCCTTTGGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGAPALP*FPFGPS
Trigger: AGAGGGACCAAAGGGAAAGCAAGGCAAGGCAGGGGC...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGCCCACCCACTTCTACTaGGCAGACAACAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: GPSCYKHALPRRASRLGRPTHFY*ADNSWG
Trigger: ACCCCAGCTGTTGTCTGCCCAGTAGAAGTGGGTGGG...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATTGGGCCTCGAGATCCTaGAGGACCCTGGGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHWASRS*RTLGSR
Trigger: CCTGGACCCCAGGGTCCTCCAGGATCTCGAGGCCCA...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCTGCAGGAGACCTCGATaGTGTCAGAGGAGCAGCCAA +
Preference number: 2 (lower is better)
Translates to: GGSKRGHPQPEDLAASHACRRPR*CQRSSQ
Trigger: TTGGCTGCTCCTCTGACACCATCGAGGTCTCCTGCA...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 90 bp GAACGGGGTGGCCGCAGAGCTGAGAGGCCACGGGGCTCAGGCAGGTaGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: ERGGRRAERPRGSGR*QVQLTLAGSLVGLW
Trigger: CCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCCGTGGCCTCTCAGCTCTGCGGCCACCCCGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CAA 90 bp CACAATGCCTTTGTGTCCATCATAACCAGCCAGTCCCGGTTCTCCTaGGGCCCCCATGCGTCCCGGAGCACCCGTTGGTCCCAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: HNAFVSIITSQSRFS*GPHASRSTRWSQAA
Trigger: GGCAGCCTGGGACCAACGGGTGCTCCGGGACGCATGGGGGCCCAAGGAGAACCGGGACTGGCTGGTTATGATGGACACAAAGGCATTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 90 bp TCCTTTCCCATCAAGCCAGGTGGCCCCCGAGGGCCCTGGATGCCTTaGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTCCGAAGAGACCT +
Preference number: 2 (lower is better)
Translates to: SFPIKPGGPRGPWMP*KPMSPGGPLGPKRP
Trigger: AGGTCTCTTCGGACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCCACCTGGCTTGATGGGAAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGTCCCTCAAGTTGGCTTaGATGTGGGGCTCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: GPSCYKHALPRRASRLGRSLKLA*MWGSLG
Trigger: GCCCAAAGAGCCCCACATTCAAGCCAACTTGAGGGA...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR TCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCTAGCAGGGACCAGCTaGCGAGACGCCCCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSLAGTS*RDAPFP
Trigger: AGGGAAGGGGGCGTCTCGTCAGCTGGTCCCTGCTAG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR TCA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGTGAGAGACAATTGTaGGCACCAGCGATTTCACAG +
Preference number: 2 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGCERQL*APAISQ
Trigger: CTGTGAAATCGCTGGTGCTCACAATTGTCTCTCACA...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTCTCGCCTTGCTTCCCTaGTTTTCCTTCAGGACCCCG +
Preference number: 2 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGLALLP*FSFRTP
Trigger: CGGGGTCCTGAAGGAAAATCAGGGAAGCAAGGCGAG...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCGGGGCTCAGGCAGGTTaGAGGTCCAGCTTACTCTGG +
Preference number: 2 (lower is better)
Translates to: SPPSRTVKGQANMLRTQAGAQAG*RSSLLW
Trigger: CCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCC...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp TACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCCAGGAAACCCCTTCCTaGCAGGCTGACCCTCCAAGC +
Preference number: 2 (lower is better)
Translates to: YHRPLGSRHAWGSHHATIQETPS*QADPPS
Trigger: GCTTGGAGGGTCAGCCTGGCAGGAAGGGGTTTCCTG...GATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCTCCTTGGGCCCCCATaGGTCCCGGAGCACCCGTTG +
Preference number: 2 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMLLGPP*VPEHPL
Trigger: CAACGGGTGCTCCGGGACGCATGGGGGCCCAAGGAG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCCTCCCCTTGTCTCCTTaGAATCCGGGATCTCCTGAC +
Preference number: 2 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPLPLSP*NPGSPD
Trigger: GTCAGGAGATCCCGGATTCCAAGGAGACAAGGGGAG...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GACCTCCTTACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGACCCTTCATGCCTTCTaGGCCATTGTCGCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: DLLTIDPLGPGTPGGPIMTLHAF*AIVARG
Trigger: CCCCCTGGCGACAATGGCCCAGAAGGCATGAAGGGT...CATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCTTCTCCCACGATTCCTaGCTCCCCGACCAGACCAAT +
Preference number: 2 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPFSHDS*LPDQTN
Trigger: ATTGGTCTGGTCGGGGAGCCAGGAATCGTGGGAGAA...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCGTCCTTGATAGCCCTTaGCACCCTTGGCTCCAGTGC +
Preference number: 2 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFVLDSP*HPWLQC
Trigger: GCACTGGAGCCAAGGGTGCCAAGGGCTATCAAGGAC...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGTCCCGGAGCACCCGTTaGTCCCAGGCTGCCCCGGGA +
Preference number: 2 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWSRSTR*SQAAPG
Trigger: TCCCGGGGCAGCCTGGGACCAACGGGTGCTCCGGGA...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATACCCACTCTCACCCTTaGATCCTGGGGGTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHTHSHP*ILGVPV
Trigger: CACAGGGACCCCCAGGATTCAAGGGTGAGAGTGGGT...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp GACCTCCTTACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGAATCCCATAAATCCCTaGTCTCCCACAGGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: DLLTIDPLGPGTPGGPIMNPINP*SPTGPG
Trigger: GCCGGGGCCTGTGGGAGAGCAGGGATTTATGGGATT...CATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCCTGCTTGCCCGTCCCTaGCAGGAAGCCCATCTGGTC +
Preference number: 2 (lower is better)
Translates to: TLWPECSTGVHPRLESCPLLARP*QEAHLV
Trigger: GACCAGATGGGCTTCCTGGCAGGGACGGGCAAGCAG...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGCAGGGAGCCCCGTTCTaGCCTCTGTTCCTCGCTTGC +
Preference number: 2 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPEQGAPF*PLFLAC
Trigger: GCAAGCGAGGAACAGAGGGCAGAACGGGGCTCCCTG...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGTCCTGGAGGCCCAATTaGCCCCTGGGGTCCCTGAGG +
Preference number: 2 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMSWRPN*PLGSLR
Trigger: CCTCAGGGACCCCAGGGGCCAATTGGGCCTCCAGGA...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTGCCTTGCTTTCCCTTTaGTCCCTCTGCGCCTTTCGA +
Preference number: 2 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGALLSL*SLCAFR
Trigger: TCGAAAGGCGCAGAGGGACCAAAGGGAAAGCAAGGC...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGCGCCCGGCTGGCCTTTaGACCCAGGCTCCCCCTGGT +
Preference number: 2 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVRPAGL*TQAPPG
Trigger: ACCAGGGGGAGCCTGGGTCCAAAGGCCAGCCGGGCG...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTAAATCACATACACTGTaGGAGACAATTGTGAGCACC +
Preference number: 2 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGKSHTL*ETIVST
Trigger: GGTGCTCACAATTGTCTCTCACAGTGTATGTGATTT...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCCAACGCCGCTTTTGTaGTTGGTTTCTTCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAPTPLL*LVSSRS
Trigger: TGACCTTGAAGAAACCAATCACAAAAGCGGCGTTGG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGGGGGCCGATGTCTCCTaGGAATCCCTCGGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWGADVS*ESLGSR
Trigger: CCTGGACCCGAGGGATTCCCAGGAGACATCGGCCCC...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCCTCTCGAGCCCAAGTaGCCTCGCTCACCAGCCACA +
Preference number: 2 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMPLEPK*PRSPAT
Trigger: TGTGGCTGGTGAGCGAGGCCACTTGGGCTCGAGAGG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGAGCCCTTGGCACCCTTaGCTCCAGTGCGGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMSPWHP*LQCGPS
Trigger: AGAAGGGCCGCACTGGAGCCAAGGGTGCCAAGGGCT...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGGCCAGGAAGCCCATCTaGTCCAGCGATGCCCTCGAG +
Preference number: 2 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMARKPI*SSDALE
Trigger: CTCGAGGGCATCGCTGGACCAGATGGGCTTCCTGGC...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 90 bp GCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTaGGCTGGGGTCTGCCCAGTGCCCTCCTGCCACACGGTCATGTTA +
Preference number: 2 (lower is better)
Translates to: ASKICPFQARKRTAC*AGVCPVPSCHTVML
Trigger: TAACATGACCGTGTGGCAGGAGGGCACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGCACCCTTGGCTCCAGTaGGGCCCTTCTCGCCTTGCT +
Preference number: 2 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWHPWLQ*GPSRLA
Trigger: AGCAAGGCGAGAAGGGCCGCACTGGAGCCAAGGGTG...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCTGGGGCCCCTGCCTTaGCTTGCTTTCCCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMLGPLP*LAFPLV
Trigger: GACCAAAGGGAAAGCAAGGCAAGGCAGGGGCCCCAG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGGGGTCCGAAGAGACCTaGCATTCCTGGGAAGCCCAT +
Preference number: 2 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPEGSEET*HSWEAH
Trigger: ATGGGCTTCCCAGGAATGGCAGGTCTCTTCGGACCC...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GCTTTCCACGGAGGCCTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGCCAGCTTACTCTGGCTaGCTCTTTGGTTGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: AFHGGLAHPPVQGTQGLPPAYSG*LFGWSL
Trigger: CAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGG...CGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCCCCCTTCCCTCAAGTTaGCTTGAATGTGGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: YHRPLGSRHAWGSHHATIPLPSS*LECGAL
Trigger: AAGAGCCCCACATTCAAGCCAACTTGAGGGAAGGGG...GATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGGTCACCCTCAAGGCCTaGCTCTCCCCGTTGCCCAAT +
Preference number: 2 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMVTLKA*LSPLPN
Trigger: ATTGGGCAACGGGGAGAGCCAGGCCTTGAGGGTGAC...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGTTCTCCATCAGGCCCTaGGTCTCCCCTGTCCCCCTT +
Preference number: 2 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMFSIRP*VSPVPL
Trigger: AAGGGGGACAGGGGAGACCCAGGGCCTGATGGAGAA...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGCTCCAGGCGGGCCCTTaGGTCCGAAGAGACCTGCCA +
Preference number: 2 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVLQAGP*VRRDLP
Trigger: TGGCAGGTCTCTTCGGACCCAAGGGCCCGCCTGGAG...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 90 bp AGGAGGGAGGTTGTCCACACTGATGATGGGCAGCTGTTGGGGGTCTaGGGTCCGGAAGGTGAAGAGTGTCTGATGCCAGCGGCCATCTTG +
Preference number: 2 (lower is better)
Translates to: RREVVHTDDGQLLGV*GPEGEECLMPAAIL
Trigger: CAAGATGGCCGCTGGCATCAGACACTCTTCACCTTCCGGACCCAAGACCCCCAACAGCTGCCCATCATCAGTGTGGACAACCTCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCTCTTCCCTCCTCCGTaGGGCCTAGAGTGGCCACGA +
Preference number: 2 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPLFPPP*GLEWPR
Trigger: TCGTGGCCACTCTAGGCCTCACGGAGGAGGGAAGAG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR-3UTR TCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCTCCCTCAAGTTGGCTTaGATGTGGGGCTCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: TLWPECSTGVHPRLESCPSLKLA*MWGSLG
Trigger: GCCCAAAGAGCCCCACATTCAAGCCAACTTGAGGGA...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCAGAGAAAGATGCGGATaGTGCCCCACATCCAAAAGT +
Preference number: 2 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFRERCG*CPTSKS
Trigger: ACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCT...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGACAACAGCTGGGGTCTaGCCAAGGACCCTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGTTAGV*PRTLGQ
Trigger: CTGCCCAAGGGTCCTTGGGCAGACCCCAGCTGTTGT...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR-3UTR GCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACGCACCCAGGCCTCCCTaGTGCCTTAAAAGGACAGAC +
Preference number: 2 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHAPRPP*CLKRTD
Trigger: GTCTGTCCTTTTAAGGCAGCAGGGAGGCCTGGGTGC...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCTGCCCAAGGACCCTTaGGCAGGGGAGCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: LRWFHVDASPLSLALTQRLPKDP*AGELPL
Trigger: GAGAGGCAGCTCCCCTGCCCAAGGGTCCTTGGGCAG...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGAACCCTGGCAACCCCTaGCTCCCCTTGTCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGNPGNP*LPLSPW
Trigger: CCAAGGAGACAAGGGGAGCCAGGGGTTGCCAGGGTT...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCTTGGCCCTGCTGGCCTaGCTTTCCACGGAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPLALLA*LSTEAL
Trigger: CAAGGCCTCCGTGGAAAGCCAGGCCAGCAGGGCCAA...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR TCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGAAAAAGCAGGAACGATaGTTGCATCTTGCAAGGACA +
Preference number: 2 (lower is better)
Translates to: GPSCYKHALPRRASRLGRKKQER*LHLART
Trigger: TGTCCTTGCAAGATGCAATCATCGTTCCTGCTTTTT...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGTCTCCTGGAGCCATCTaGCCCTCAGTACCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVSPGAI*PSVPSP
Trigger: AGGGGAGGGTACTGAGGGGCAGATGGCTCCAGGAGA...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGAGGTCCAGCTTACTCTaGCTGGCTCTTTGGTTGGTC +
Preference number: 2 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPERSSLL*LALWLV
Trigger: GACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCT...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 90 bp GCTCAGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTaGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCAAGGACACC +
Preference number: 2 (lower is better)
Translates to: AQAGCRSSLLWLALW*VFGAKLGSIVPKDT
Trigger: GGTGTCCTTGGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR-3UTR GCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGAGCAGGAACGATGATTaGATCTTGCAAGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: DEARAATNTHFHAERPGWSRNDD*ILQGQA
Trigger: AGCCTGTCCTTGCAAGATGCAATCATCGTTCCTGCT...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCTCTTTGGGGCTAAGCTaGGATCCATTGTTCCCAAGG +
Preference number: 2 (lower is better)
Translates to: TLWPECSTGVHPRLESCPSLGLS*DPLFPR
Trigger: CCTTGGGAACAATGGATCCCAGCTTAGCCCCAAAGA...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGACTCTGGCTGGCTCTTTaGTTGGTCTTTGGGGCTAAG +
Preference number: 2 (lower is better)
Translates to: EGPSQHASHPGLPAALKGLWLAL*LVFGAK
Trigger: CTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCAGCTTACTCTGGCTaGCTCTTTGGTTGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSPAYSG*LFGWSL
Trigger: CAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CAA 90 bp CAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTaGGGGCTAAGCTGGGATCCATTGTTCCCAAGGACACCCTATCCC +
Preference number: 2 (lower is better)
Translates to: QVAGPAYSGWLFGWS*GLSWDPLFPRTPYP
Trigger: GGGATAGGGTGTCCTTGGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR-3UTR GCA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGCTCACTGCAACCTCTaGCTCCTAGTGATCCTGCCG +
Preference number: 2 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLAHCNL*LLVILP
Trigger: CGGCAGGATCACTAGGAGGCAGAGGTTGCAGTGAGC...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCCCATCAGCCCTTCCTaGCCTTTCTCGCCATGTTCT +
Preference number: 2 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPPISPS*PFSPCS
Trigger: AGAACATGGCGAGAAAGGCCAGGAAGGGCTGATGGG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR GCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTCTCCTGGAGCCATCTaGCCCTCAGTACCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARSPGAI*PSVPSP
Trigger: AGGGGAGGGTACTGAGGGGCAGATGGCTCCAGGAGA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTGGGCAGACAACAGCTaGGGTCTGCCCAAGGACCCT +
Preference number: 2 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARWADNS*GLPKDP
Trigger: AGGGTCCTTGGGCAGACCCCAGCTGTTGTCTGCCCA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp AAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCCAGTGATAACTGCTCACTaGAACCTCTGCCTCCTAGTG +
Preference number: 2 (lower is better)
Translates to: KVDRLTSWDKNQPGGLCPVITAH*NLCLLV
Trigger: CACTAGGAGGCAGAGGTTGCAGTGAGCAGTTATCAC...TGGACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR GCA 90 bp AAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCCACAGTGGTGTGATAACTaGTCACTGCAACCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: KVDRLTSWDKNQPGGLCPQWCDN*SLQPLP
Trigger: AGGCAGAGGTTGCAGTGAGCAGTTATCACACCACTG...TGGACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR GCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGCCCCGACGTCCCTTTaGTCCCCTCATGCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: RREKDADDAPHPKVSSKSAPTSL*SPHAWW
Trigger: CCACCAGGCATGAGGGGAGCAAAGGGACGTCGGGGC...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAAGAATCAGCCAGGTaGGCTGTGTCCAGGGGATCC +
Preference number: 2 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNQESAR*AVSRGS
Trigger: GGATCCCCTGGACACAGCCCACCTGGCTGATTCTTG...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR CCA 90 bp CAACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGATCGTCTCACCTCCTaGGACAAGAATCAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: QHHMAKVIKQAEPRSTSGDRLTS*DKNQPG
Trigger: ACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATC...TCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR CAA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTaGGCATGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTA +
Preference number: 2 (lower is better)
Translates to: GQGHKASRAQVHLWS*ACSYELCTGKAWYV
Trigger: TACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR TCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGCTCTTCCCTCCTCCGTaGGGCCTAGAGTGGCCACGA +
Preference number: 2 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLLFPPP*GLEWPR
Trigger: TCGTGGCCACTCTAGGCCTCACGGAGGAGGGAAGAG...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp CAACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAAGCTGGGATTACAGATaGACACCACTACACCTGGCT +
Preference number: 2 (lower is better)
Translates to: QHHMAKVIKQAEPRSTSGSWDYR*TPLHLA
Trigger: AGCCAGGTGTAGTGGTGTGCATCTGTAATCCCAGCT...TCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR GCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCAAGGGGTCCCACAATaGCTTTGTGTCCATCATAAC +
Preference number: 2 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPQGVPQ*LCVHHN
Trigger: GTTATGATGGACACAAAGGCATTGTGGGACCCCTTG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGGGAGCTGCCTCTCCTaGAGCCATCTGCCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: REKDADDAPHPKVSSKSVGSCLS*SHLPLS
Trigger: ACTGAGGGGCAGATGGCTCCAGGAGAGGCAGCTCCC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCCCCTTCCCTCAAGTTaGCTTGAATGTGGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: FHVDASPLSLALTQRRFCPLPSS*LECGAL
Trigger: AAGAGCCCCACATTCAAGCCAACTTGAGGGAAGGGG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp CAACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGATGCACGGGCAAAGCCTaGTATGTAGAAGCTGCTCAA +
Preference number: 2 (lower is better)
Translates to: QHHMAKVIKQAEPRSTSGCTGKA*YVEAAQ
Trigger: TTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCA...TCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR TCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCAGAGAAAGATGCGGATaGTGCCCCACATCCAAAAGT +
Preference number: 2 (lower is better)
Translates to: LRWFHVDASPLSLALTQRRERCG*CPTSKS
Trigger: ACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCT...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp GGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGTTGCAGATCATCCAGGCTGAAGTaGAGTGGTGTGATAACTGCT +
Preference number: 2 (lower is better)
Translates to: GQSLVCRSCSNACPTGCRSSRLK*SGVITA
Trigger: AGCAGTTATCACACCACTGCACTTCAGCCTGGATGA...TCTGCAACCAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR CCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCAGGTCCAGCTTACTCTaGCTGGCTCTTTGGTTGGTC +
Preference number: 2 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARRSSLL*LALWLV
Trigger: GACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCT...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CAA 90 bp AGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTaGGTCATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAAT +
Preference number: 2 (lower is better)
Translates to: RVSPGKFQSHLNQLF*VMLKVDRLTSWDKN
Trigger: ATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCATGACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR TCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCAAATCACATACACTGTaGGAGACAATTGTGAGCACC +
Preference number: 2 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPKSHTL*ETIVST
Trigger: GGTGCTCACAATTGTCTCTCACAGTGTATGTGATTT...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR-3UTR CCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCGGCTGGCTCTTTGGTTaGTCTTTGGGGCTAAGCTGG +
Preference number: 2 (lower is better)
Translates to: AERHYGVELRDSHYYSVSGWLFG*SLGLSW
Trigger: CCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCC...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACTTTCTTCAAAGTCTGTaGCAAAATAATGGTAGCACC +
Preference number: 2 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHFLQSL*QNNGST
Trigger: GGTGCTACCATTATTTTGCCACAGACTTTGAAGAAA...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGGTCCCCATACCACCTaGCATTCCAGGATGACCTCC +
Preference number: 2 (lower is better)
Translates to: REKDADDAPHPKVSSKSVGPHTT*HSRMTS
Trigger: GGAGGTCATCCTGGAATGCCAGGTGGTATGGGGACC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCAGAAACGGAACCCATTaGGGTTTTAATACACTGACA +
Preference number: 2 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPRNGTH*GFNTLT
Trigger: TGTCAGTGTATTAAAACCCCAATGGGTTCCGTTTCT...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCCTTTGTCTCCGACTTTaGCCAGAGGCCCTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFLCLRL*PEALAS
Trigger: GGAAGCCAGGGCCTCTGGGCAAAGTCGGAGACAAAG...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCAAATCTCTCTACTTCTaGTTTCTGGTAGGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPKSLYF*FLVGFL
Trigger: CAAAAACCCTACCAGAAACCAGAAGTAGAGAGATTT...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR TCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGGAGATGGTTCCATGTTaGTGCTTCACCTCTAAGCCT +
Preference number: 2 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMEMVPC*CFTSKP
Trigger: AGGCTTAGAGGTGAAGCATCAACATGGAACCATCTC...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR GCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGACGATGATTGCATCTTaGAAGGACAGGCTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMTMIAS*KDRLLE
Trigger: TTCCAGGAGCCTGTCCTTGCAAGATGCAATCATCGT...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTTCTTTGGGGCTAAGCTaGGATCCATTGTTCCCAAGG +
Preference number: 2 (lower is better)
Translates to: RREKDADDAPHPKVSSKSSLGLS*DPLFPR
Trigger: CCTTGGGAACAATGGATCCCAGCTTAGCCCCAAAGA...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR-3UTR TCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGTGTGAGAGACAATTGTaGGCACCAGCGATTTCACAG +
Preference number: 2 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLCERQL*APAISQ
Trigger: CTGTGAAATCGCTGGTGCTCACAATTGTCTCTCACA...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CCA 72 bp GCCACACCCTGCTGTCCAGGCCGGCCCGGTCTGCCCTaGGGTCCTGGAGGGCCCTTCAGGCCCCTGGACCCT +
Preference number: 3 (lower is better)
Translates to: ATPCCPGRPGLP*GPGGPFRPLDP
Trigger: AGGGTCCAGGGGCCTGAAGGGCCCTCCAGGACCCCAGGGCAGACCGGGCCGGCCTGGACAGCAGGGTGTGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCGTCCCGGAGCACCCGTaGGTCCCAGGCTGCCCCGGG +
Preference number: 3 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLVPEHP*VPGCPG
Trigger: CCCGGGGCAGCCTGGGACCAACGGGTGCTCCGGGAC...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGCAGTCCCGGTTCTCCTaGGGCCCCCATGCGTCCCGG +
Preference number: 3 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPQSRFS*GPHASR
Trigger: CCGGGACGCATGGGGGCCCAAGGAGAACCGGGACTG...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTCGGGGCTCAGGCAGGTaGCAGGTCCAGCTTACTCTG +
Preference number: 3 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGRGSGR*QVQLTL
Trigger: CAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCCG...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCTTACCATCGACCCCTaGGGTCCAGGCACGCCTGGG +
Preference number: 3 (lower is better)
Translates to: GGSKRGHPQPEDLAASHALTIDP*GPGTPG
Trigger: CCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR GCA 72 bp CATCCCGGCTTCCCCAGGAAGGCCCGGTTCTCCCACTaGACCAGGCGGCCCCTTGGGTCCCATCTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: HPGFPRKARFSH*TRRPLGSHLSW
Trigger: CCAGGAGAGATGGGACCCAAGGGGCCGCCTGGTGCAGTGGGAGAACCGGGCCTTCCTGGGGAAGCCGGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp GCTTTCCCTTTGGTCCCTCTGCGCCTTTCGATCCTTTaGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGG +
Preference number: 3 (lower is better)
Translates to: AFPLVPLRLSIL*VPATPGVPDAR
Trigger: CCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGCAGAGGGACCAAAGGGAAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR GCA 72 bp GGTTGGCCCTGCTGGCCTGGCTTTCCACGGAGGCCTTaGACACCCTCCTGTCCAGGGTACCCAGGGTCTCCC +
Preference number: 3 (lower is better)
Translates to: GWPCWPGFPRRP*TPSCPGYPGSP
Trigger: GGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAGCCAGGCCAGCAGGGCCAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp GAGTCGCCCGGCTGGCCTTTGGACCCAGGCTCCCCCTaGTTTCCAGGGAGCCCCGTTCTGCCCTCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: ESPGWPLDPGSP*FPGSPVLPSVP
Trigger: AGGAACAGAGGGCAGAACGGGGCTCCCTGGAAACCAGGGGGAGCCTGGGTCCAAAGGCCAGCCGGGCGACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp TCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTaGCTGGGGTCTGCCCAGTGCCCTCCTGCCACACGG +
Preference number: 3 (lower is better)
Translates to: SVHSRPGSVRPA*LGSAQCPPATR
Trigger: CCGTGTGGCAGGAGGGCACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCGAGGCCGTGATGGGCTaGAGACACGTCTGTCCACCA +
Preference number: 3 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAEAVMG*RHVCPP
Trigger: TGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTC...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR TCA 72 bp TCAAGCCAGGTGGCCCCCGAGGGCCCTGGATGCCTTTaGAGCCAATGTCTCCAGGCGGGCCCTTGGGTCCGA +
Preference number: 3 (lower is better)
Translates to: SSQVAPEGPGCL*SQCLQAGPWVR
Trigger: TCGGACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCCACCTGGCTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR GCA 72 bp GTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATaGCTTCCTTTCCCATCAAGCCAGGTGGCCCCCGAG +
Preference number: 3 (lower is better)
Translates to: VPKVPGFRGARR*LPFPSSQVAPE
Trigger: CTCGGGGGCCACCTGGCTTGATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp TGGGCAGACAACAGCTGGGGTCTGCCCAAGGACCCTTaGGCAGGGGAGCTGCCTCTCCTGGAGCCATCTGCC +
Preference number: 3 (lower is better)
Translates to: WADNSWGLPKDP*AGELPLLEPSA
Trigger: GGCAGATGGCTCCAGGAGAGGCAGCTCCCCTGCCCAAGGGTCCTTGGGCAGACCCCAGCTGTTGTCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CCA 72 bp TCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTaGGGTCTGCCCAGTGCCCTCCTGCCACACGGTCAT +
Preference number: 3 (lower is better)
Translates to: SIPGPEAYGLLG*GLPSALLPHGH
Trigger: ATGACCGTGTGGCAGGAGGGCACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR GCA 72 bp TTCCAGGGAGCCCCGTTCTGCCCTCTGTTCCTCGCTTaGCAGGGGGACCCAGCTGTCCGGGTAACCCACTCT +
Preference number: 3 (lower is better)
Translates to: FQGAPFCPLFLA*QGDPAVRVTHS
Trigger: AGAGTGGGTTACCCGGACAGCTGGGTCCCCCTGGCAAGCGAGGAACAGAGGGCAGAACGGGGCTCCCTGGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp CCTACCCCCACCCACTTCTACTGGGCAGACAACAGCTaGGGTCTGCCCAAGGACCCTTGGGCAGGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: PTPTHFYWADNS*GLPKDPWAGEL
Trigger: CAGCTCCCCTGCCCAAGGGTCCTTGGGCAGACCCCAGCTGTTGTCTGCCCAGTAGAAGTGGGTGGGGGTAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CCA 72 bp TCCTTTCCCATCAAGCCAGGTGGCCCCCGAGGGCCCTaGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCC +
Preference number: 3 (lower is better)
Translates to: SFPIKPGGPRGP*MPLKPMSPGGP
Trigger: GGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCCACCTGGCTTGATGGGAAAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCGCACCAGGCGGCCCCTaGGGTCCCATCTCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: TLWPECSTGVHPRLESCPAPGGP*GPISPG
Trigger: TCCAGGAGAGATGGGACCCAAGGGGCCGCCTGGTGC...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR GCA 72 bp AAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTaGTTGGCTGGGGTCTGCCCAGTGCCCTCCTGCCAC +
Preference number: 3 (lower is better)
Translates to: KICPFQARKRTA*LAGVCPVPSCH
Trigger: GTGGCAGGAGGGCACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCTAAGCTGGGATCCATaGTTCCCAAGGACACCCTAT +
Preference number: 3 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGLSWDP*FPRTPY
Trigger: ATAGGGTGTCCTTGGGAACAATGGATCCCAGCTTAG...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGCTTTCCACGGAGGCCTaGCACACCCTCCTGTCCAGG +
Preference number: 3 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPELSTEA*HTLLSR
Trigger: CCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAG...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp GCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTaGGGCGGCAGGGCGAGGATACAGAAGTGTTGGGAG +
Preference number: 3 (lower is better)
Translates to: ATNTHFHAERPG*GGRARIQKCWE
Trigger: CTCCCAACACTTCTGTATCCTCGCCCTGCCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CCA 72 bp TGGCATTCCAGGATGACCTCCTTACCATCGACCCCTTaGGTCCAGGCACGCCTGGGGGTCCCATCATGCCAC +
Preference number: 3 (lower is better)
Translates to: WHSRMTSLPSTP*VQARLGVPSCH
Trigger: GTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTCATCCTGGAATGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGGCCTGGCTCTCCCCGTaGCCCAATGAGGCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVAWLSP*PNEALL
Trigger: GAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGC...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR TCA 72 bp TGGATTCTGGCAGCAGGAGGGATCCGAGCGCTGAGATaGGGCCCGAGCTGCTACAAACACGCACTTCCACGC +
Preference number: 3 (lower is better)
Translates to: WILAAGGIRALR*GPSCYKHALPR
Trigger: GCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATCTCAGCGCTCGGATCCCTCCTGCTGCCAGAATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR TCA 72 bp GCCAGTGGATTCTGGCAGCAGGAGGGATCCGAGCGCTaGGATGAGGCCCGAGCTGCTACAAACACGCACTTC +
Preference number: 3 (lower is better)
Translates to: ASGFWQQEGSER*DEARAATNTHF
Trigger: GAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATCTCAGCGCTCGGATCCCTCCTGCTGCCAGAATCCACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR GCA 72 bp TTGGCACCCTTGGCTCCAGTGCGGCCCTTCTCGCCTTaGTTCCCTGATTTTCCTTCAGGACCCCGGACACCA +
Preference number: 3 (lower is better)
Translates to: LAPLAPVRPFSP*FPDFPSGPRTP
Trigger: TGGTGTCCGGGGTCCTGAAGGAAAATCAGGGAAGCAAGGCGAGAAGGGCCGCACTGGAGCCAAGGGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp AGGGACCAGCTGACGAGACGCCCCCTTCCCTCAAGTTaGCTTGAATGTGGGGCTCTTTGGGCAGGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: RDQLTRRPLPSS*LECGALWAGSW
Trigger: CCAGCTTCCTGCCCAAAGAGCCCCACATTCAAGCCAACTTGAGGGAAGGGGGCGTCTCGTCAGCTGGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR-3UTR CAA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTTCCCTCAAGTTGGCTaGAATGTGGGGCTCTTTGGG +
Preference number: 3 (lower is better)
Translates to: SPPSRTVKGQANMLRTQAFPQVG*NVGLFG
Trigger: CCCAAAGAGCCCCACATTCAAGCCAACTTGAGGGAA...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR GCA 72 bp CAGAGGAAGCACGCAGGTCCAACTTCCAGGCGGTACTaGTTCCCTGATGAGGCAGGAGGGAGGTTGTCCACA +
Preference number: 3 (lower is better)
Translates to: QRKHAGPTSRRY*FPDEAGGRLST
Trigger: TGTGGACAACCTCCCTCCTGCCTCATCAGGGAAGCAGTACCGCCTGGAAGTTGGACCTGCGTGCTTCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp CACGGGGCTCAGGCAGGTTGCAGGTCCAGCTTACTCTaGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTG +
Preference number: 3 (lower is better)
Translates to: HGAQAGCRSSLL*LALWLVFGAKL
Trigger: CAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CCA 72 bp CCAGTGCCCTCCTGCCACACGGTCATGTTAAGGCAGTaGATGGTGATGTGCTGGGTCACCTCGGAGCTTAGC +
Preference number: 3 (lower is better)
Translates to: PVPSCHTVMLRQ*MVMCWVTSELS
Trigger: GCTAAGCTCCGAGGTGACCCAGCACATCACCATCCACTGCCTTAACATGACCGTGTGGCAGGAGGGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATTTCCCTCAAGTTGGCTaGAATGTGGGGCTCTTTGGG +
Preference number: 3 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHFPQVG*NVGLFG
Trigger: CCCAAAGAGCCCCACATTCAAGCCAACTTGAGGGAA...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCAAAATTCCCCAAACTTaGTCATTTGGAGGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAKIPQT*SFGGER
Trigger: TCTCTCTCCTCCAAATGACAAAGTTTGGGGAATTTT...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR-3UTR CAA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATAACCCAATGGATCCTTaGTCTCCGACTTTGCCCAGA +
Preference number: 3 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHNPMDP*SPTLPR
Trigger: TCTGGGCAAAGTCGGAGACAAAGGATCCATTGGGTT...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR TCA 72 bp ACCTTGCAGCCATCCATGGACACCTCGGGCCGGAACTaGCCCCCAGCTTCAAAAATCTGTCCATTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: TLQPSMDTSGRN*PPASKICPFQA
Trigger: GGCCTGGAATGGACAGATTTTTGAAGCTGGGGGTCAGTTCCGGCCCGAGGTGTCCATGGATGGCTGCAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp GGGCTCAGGCAGGTTGCAGGTCCAGCTTACTCTGGCTaGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: GLRQVAGPAYSG*LFGWSLGLSWD
Trigger: ATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CCA 72 bp GTCACCTCGGAGCTTAGCAGGTGCAGGAAATTCATCTaGACCCGGCTGATGGCAAACTCGACCTTGGAGGCC +
Preference number: 3 (lower is better)
Translates to: VTSELSRCRKFI*TRLMANSTLEA
Trigger: GGCCTCCAAGGTCGAGTTTGCCATCAGCCGGGTCCAGATGAATTTCCTGCACCTGCTAAGCTCCGAGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGACTCTTTGGTTGGTCTTaGGGGCTAAGCTGGGATCCA +
Preference number: 3 (lower is better)
Translates to: EGPSQHASHPGLPAALKGLFGWS*GLSWDP
Trigger: TGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAG...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR TCA 72 bp GAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATaGGTGAAGTTGCAGGAGACCTCGATGGTGTCAGAG +
Preference number: 3 (lower is better)
Translates to: EAVMGLRHVCPP*VKLQETSMVSE
Trigger: CTCTGACACCATCGAGGTCTCCTGCAACTTCACTCATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp AAAGATCTCTCCTCCCTGGTCCAGCACCAGCCGGTCTaGATAGCTGTAACTCTCTGGCCTGAGTGCTCCACT +
Preference number: 3 (lower is better)
Translates to: KDLSSLVQHQPV*IAVTLWPECST
Trigger: AGTGGAGCACTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGAGAGATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCGGGGCTCAGGCAGGTaGCAGGTCCAGCTTACTCTG +
Preference number: 3 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARRGSGR*QVQLTL
Trigger: CAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCCG...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR TCA 72 bp GAAGAGGCGATGCGGCTTCCTGAGATGGTTCCATGTTaGTGCTTCACCTCTAAGCCTAGCCCTGACCCAACG +
Preference number: 3 (lower is better)
Translates to: EEAMRLPEMVPC*CFTSKPSPDPT
Trigger: CGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAGGAAGCCGCATCGCCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR GCA 72 bp ATGGTGATGTGCTGGGTCACCTCGGAGCTTAGCAGGTaGAGGAAATTCATCTGGACCCGGCTGATGGCAAAC +
Preference number: 3 (lower is better)
Translates to: MVMCWVTSELSR*RKFIWTRLMAN
Trigger: GTTTGCCATCAGCCGGGTCCAGATGAATTTCCTGCACCTGCTAAGCTCCGAGGTGACCCAGCACATCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR GCA 72 bp TGCCACACGGTCATGTTAAGGCAGTGGATGGTGATGTaGTGGGTCACCTCGGAGCTTAGCAGGTGCAGGAAA +
Preference number: 3 (lower is better)
Translates to: CHTVMLRQWMVM*WVTSELSRCRK
Trigger: TTTCCTGCACCTGCTAAGCTCCGAGGTGACCCAGCACATCACCATCCACTGCCTTAACATGACCGTGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp TTCTTGGTCATGCTGAAGGTAGATCGTCTCACCTCCTaGGACAAGAATCAGCCAGGTGGGCTGTGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: FLVMLKVDRLTS*DKNQPGGLCPG
Trigger: CCCTGGACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCATGACCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR CCA 72 bp GTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTaGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCA +
Preference number: 3 (lower is better)
Translates to: VAGPAYSGWLFG*SLGLSWDPLFP
Trigger: TGGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CCA 72 bp GCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTaGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTT +
Preference number: 3 (lower is better)
Translates to: AGCRSSLLWLAL*LVFGAKLGSIV
Trigger: AACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CCA 72 bp TCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTaGAAAGCTGCCCCAAGATCATCTTGTTGCAATTGG +
Preference number: 3 (lower is better)
Translates to: SGLSAPLVSIHV*KAAPRSSCCNW
Trigger: CCAATTGCAACAAGATGATCTTGGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp CACACGGTCATGTTAAGGCAGTGGATGGTGATGTGCTaGGTCACCTCGGAGCTTAGCAGGTGCAGGAAATTC +
Preference number: 3 (lower is better)
Translates to: HTVMLRQWMVMC*VTSELSRCRKF
Trigger: GAATTTCCTGCACCTGCTAAGCTCCGAGGTGACCCAGCACATCACCATCCACTGCCTTAACATGACCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR TCA 72 bp AGCCCAGGTCCACCTCTGGAGTTTGGCATGTTCATATaGGCTATGCACGGGCAAAGCCTGGTATGTAGAAGC +
Preference number: 3 (lower is better)
Translates to: SPGPPLEFGMFI*AMHGQSLVCRS
Trigger: GCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAAACTCCAGAGGTGGACCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR CAA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCTAAGCTGGGATCCATaGTTCCCAAGGACACCCTAT +
Preference number: 3 (lower is better)
Translates to: LRWFHVDASPLSLALTQRLSWDP*FPRTPY
Trigger: ATAGGGTGTCCTTGGGAACAATGGATCCCAGCTTAG...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CAA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGAAAATTCCCCAAACTTaGTCATTTGGAGGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPEKIPQT*SFGGER
Trigger: TCTCTCTCCTCCAAATGACAAAGTTTGGGGAATTTT...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCTGCCCCAAGATCATCTaGTTGCAATTGGATAGGACC +
Preference number: 3 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPCPKII*LQLDRT
Trigger: GGTCCTATCCAATTGCAACAAGATGATCTTGGGGCA...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGAACCCCTGGCTCCCCTaGTCTCCTTGGAATCCGGGA +
Preference number: 3 (lower is better)
Translates to: REKDADDAPHPKVSSKSVNPWLP*SPWNPG
Trigger: TCCCGGATTCCAAGGAGACAAGGGGAGCCAGGGGTT...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CCA 72 bp ATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTaGCATGTTCATATGAGCTATGCACGGGCAAAGCCT +
Preference number: 3 (lower is better)
Translates to: IKQAEPRSTSGV*HVHMSYARAKP
Trigger: AGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR CAA 90 bp GGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGTTGCAGACTAAACCAGCTCTTCTaGGTCATGCTGAAGGTAGAT +
Preference number: 3 (lower is better)
Translates to: GQSLVCRSCSNACPTGCRLNQLF*VMLKVD
Trigger: ATCTACCTTCAGCATGACCAAGAAGAGCTGGTTTAG...TCTGCAACCAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR TCA 72 bp GACTTGTTCGCTGATGTAGCACAATTCAGAGGACGCTaGACGTCACTATGGTGTCGAACTCCGAGATTCCCA +
Preference number: 3 (lower is better)
Translates to: DLFADVAQFRGR*TSLWCRTPRFP
Trigger: TGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGCGTCCTCTGAATTGTGCTACATCAGCGAACAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR GCA 72 bp GTCCACCTCTGGAGTTTGGCATGTTCATATGAGCTATaGACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAA +
Preference number: 3 (lower is better)
Translates to: VHLWSLACSYEL*TGKAWYVEAAQ
Trigger: TTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAAACTCCAGAGGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR CCA 72 bp CTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTGATTaGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTC +
Preference number: 3 (lower is better)
Translates to: LSLALTQRRFCD*FLQGQVFTQDL
Trigger: GAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CCA 72 bp TTGGCATGTTCATATGAGCTATGCACGGGCAAAGCCTaGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTG +
Preference number: 3 (lower is better)
Translates to: LACSYELCTGKA*YVEAAQTRVQL
Trigger: CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR-3UTR CAA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGTGGCTGGCTCTTTGGTaGGTCTTTGGGGCTAAGCTG +
Preference number: 3 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLWLALW*VFGAKL
Trigger: CAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCA...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR-3UTR CAA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCCCTTTGTCTCCGACTTaGCCCAGAGGCCCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFPLSPT*PRGPGF
Trigger: GAAGCCAGGGCCTCTGGGCAAAGTCGGAGACAAAGG...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR-3UTR CAA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCTCTTTGGTTGGTCTTaGGGGCTAAGCTGGGATCCA +
Preference number: 3 (lower is better)
Translates to: RREKDADDAPHPKVSSKSLFGWS*GLSWDP
Trigger: TGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR TCA 72 bp AACCTCAAAATCCAATTCAAGCGCCGACTTGTTCGCTaGTGTAGCACAATTCAGAGGACGCTGAACGTCACT +
Preference number: 3 (lower is better)
Translates to: NLKIQFKRRLVR*CSTIQRTLNVT
Trigger: AGTGACGTTCAGCGTCCTCTGAATTGTGCTACATCAGCGAACAAGTCGGCGCTTGAATTGGATTTTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR GCA 72 bp AATGACAATGAAAAAGCAGGAACGATGATTGCATCTTaGAAGGACAGGCTCCTGGAAGTGAGGACCTCGGAA +
Preference number: 3 (lower is better)
Translates to: NDNEKAGTMIAS*KDRLLEVRTSE
Trigger: TTCCGAGGTCCTCACTTCCAGGAGCCTGTCCTTGCAAGATGCAATCATCGTTCCTGCTTTTTCATTGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR TCA 72 bp AAAGGAGAAACGGAACCCATTGGGGTTTTAATACACTaGCATGTGGACAGAGACGTAAACGAAGACAGCAGG +
Preference number: 3 (lower is better)
Translates to: KGETEPIGVLIH*HVDRDVNEDSR
Trigger: CCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGTATTAAAACCCCAATGGGTTCCGTTTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR TCA 72 bp AAACTTTGTCATTTGGAGGAGAGAGAAAGATGCGGATaGTGCCCCACATCCAAAAGTTTCTTCAAAGTCTGT +
Preference number: 3 (lower is better)
Translates to: KLCHLEERERCG*CPTSKSFFKVC
Trigger: ACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCTCCAAATGACAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTGGGGAGGTTTGTGGGTaGTGGTGCGGGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGGEVCG*WCGQRP
Trigger: CGGCCTCTGCCCGCACCAGCACCCACAAACCTCCCC...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGCGCCGGGACCCGAGGTaGACGACCGTCTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRRRDPR*TTVLPG
Trigger: CCCCGGCAAGACGGTCGTCCACCTCGGGTCCCGGCG...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCTTGCTCCCCAGCTaGTCCGTCCGGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGPLLPS*SVRSSG
Trigger: CCCCGAGGACCGGACGGACCAGCTGGGGAGCAAGGG...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCGCCCGGCTGGCCTTTaGACCCAGGCTCCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHARPAGL*TQAPPG
Trigger: ACCAGGGGGAGCCTGGGTCCAAAGGCCAGCCGGGCG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCCCTTCCTGCCAGGCTaGCCCTCCAAGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLPFLPG*PSKPGA
Trigger: GGCCCCTGGCTTGGAGGGTCAGCCTGGCAGGAAGGG...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCACAGGCACCCGGCGCTaGCCGCAGGCAGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHATGTRR*PQAVTR
Trigger: TCTGGTGACTGCCTGCGGGCAGCGCCGGGTGCCTGT...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCTTTGGCCCCTGGGCTaGCCTCAGGTCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHALWPLG*PQVLAA
Trigger: GGCAGCCAGGACCTGAGGGCAGCCCAGGGGCCAAAG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGTTGGAGGCGGGCTGCTaGCGGTCCCCGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRLEAGC*RSPEAE
Trigger: CTCTGCCTCCGGGGACCGCCAGCAGCCCGCCTCCAA...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCGGGTCCAGGCACGCCTaGGGGTCCCATCATGCCACG +
Preference number: 4 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGGSRHA*GSHHAT
Trigger: CGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCC...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGCGCCCGGCTGGCCTTTaGACCCAGGCTCCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRRPAGL*TQAPPG
Trigger: ACCAGGGGGAGCCTGGGTCCAAAGGCCAGCCGGGCG...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCAATGACTCCCGGGGGTaGAGGGCTCCCGGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHANDSRG*RAPGLR
Trigger: ACGAAGGCCGGGAGCCCTGCACCCCCGGGAGTCATT...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGCAGGCTTCCGGGGGCTaGTCTTGGGTCCGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPQASGG*SWVRLS
Trigger: AGAAAGCCGGACCCAAGAGCAGCCCCCGGAAGCCTG...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGACCCTCAGGTCCTGGCTaGCCCTGTTCTCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGPSGPG*PCSPGC
Trigger: GCACCCCGGAGAACAGGGGCAGCCAGGACCTGAGGG...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GCTTTCCACGGAGGCCTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGCCCGGTTCTCCCACTaGACCAGGCGGCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AFHGGLAHPPVQGTQGLPARFSH*TRRPLG
Trigger: CCCAAGGGGCCGCCTGGTGCAGTGGGAGAACCGGGC...CGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCGGCCTGGGGCCCCTaGCTTGCCTTGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGPAWGP*LALLSL
Trigger: AAGGGAAAGCAAGGCAAGGCAGGGGCCCCAGGCCGG...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCTGCTTGGCTGGGGTCTaGCCAGTGCCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGCLAGV*PVPSCH
Trigger: GTGGCAGGAGGGCACTGGGCAGACCCCAGCCAAGCA...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCCTTCCCACGCCTGGCTaGTCCTTCCCATCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPLPTPG*SFPSSH
Trigger: GTGAGAGGATGGGAAGGAGCAGCCAGGCGTGGGAAG...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCCGGCCCGGTCTGCCCTaGGGTCCTGGAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQARPGLP*GPGGPF
Trigger: GAAGGGCCCTCCAGGACCCCAGGGCAGACCGGGCCG...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCAGGGCCCGGTTCTCCTaGGAGGCCCTTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPRARFS*EALGAW
Trigger: CCAGGCACCAAGGGCCTCCCAGGAGAACCGGGCCCT...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTGTCACCCTCAAGGCCTaGCTCTCCCCGTTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGVTLKA*LSPLPN
Trigger: ATTGGGCAACGGGGAGAGCCAGGCCTTGAGGGTGAC...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGAGCCCTTGGCACCCTTaGCTCCAGTGCGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPSPWHP*LQCGPS
Trigger: AGAAGGGCCGCACTGGAGCCAAGGGTGCCAAGGGCT...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCTCCCGGAGCACCCGTTaGTCCCAGGCTGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFSRSTR*SQAAPG
Trigger: TCCCGGGGCAGCCTGGGACCAACGGGTGCTCCGGGA...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCATCTTCTGTGATGGTTaGGCGGCCGCAGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAIFCDG*AAAGRG
Trigger: GCCTCGCCCTGCGGCCGCTCAACCATCACAGAAGAT...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGACTAGCAGGGACCAGCTaGCGAGACGCCCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGLAGTS*RDAPFP
Trigger: AGGGAAGGGGGCGTCTCGTCAGCTGGTCCCTGCTAG...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCTGGAGCCGGGCCCGCTaGGTAAAGATGAAGCCCGAC +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAWSRAR*VKMKPD
Trigger: GTCGGGCTTCATCTTTACGCAGCGGGCCCGGCTCCA...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCTGGATGGGCTTCTCTaGGGGACGGGAGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGLDGLL*GTGDSG
Trigger: GCCAGAGTCTCCCGTCCCGCAGAGAAGCCCATCCAG...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTCCCTGGCTTCCCCCGTaGACCGGGGAACCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGPWLPP*TGEPWQ
Trigger: TTGCCAGGGTTCCCCGGTGCACGGGGGAAGCCAGGG...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGACCTGGCTCTCCCCGTTaGCCAATGAGGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGPGSPR*PMRPCS
Trigger: GGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGG...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTTGCCGTCCTCGCCCTaGTCCCCCTTTTCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGLPSSP*SPFSPF
Trigger: AAAAGGCGAAAAGGGGGAGCAGGGCGAGGACGGCAA...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCTGCCCGGGTTGGCCCTaGTGGCCTGGCTTTCCACGG +
Preference number: 4 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFCPGWP*WPGFPR
Trigger: CCGTGGAAAGCCAGGCCAGCAGGGCCAACCCGGGCA...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCCCAGTCCCCACGGCTaGCTTTGTCACCCTTCGGAC +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAPSPHG*LCHPSD
Trigger: GTCCGAAGGGTGACAAAGGCAGCCGTGGGGACTGGG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCAGTCCCCACGGCTaGCTTTGTCACCCTTCGGAC +
Preference number: 4 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGPSPHG*LCHPSD
Trigger: GTCCGAAGGGTGACAAAGGCAGCCGTGGGGACTGGG...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTTCGTGGGCCGGGGGCTaGAGGACAGGAATTGCGCCG +
Preference number: 4 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGSWAGG*RTGIAP
Trigger: CGGCGCAATTCCTGTCCTCCAGCCCCCGGCCCACGA...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCTTGGCCCTGCTGGCCTaGCTTTCCACGGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGLALLA*LSTEAL
Trigger: CAAGGCCTCCGTGGAAAGCCAGGCCAGCAGGGCCAA...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCAGCGTACGGCCTGCTTaGCTGGGGTCTGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLSVRPA*LGSAQC
Trigger: GCACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCT...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGCCAGCGGCCATCTTaGACCTTGCAGCCATCCATG +
Preference number: 4 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGCQRPS*TLQPSM
Trigger: CATGGATGGCTGCAAGGTCCAAGATGGCCGCTGGCA...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 72 bp TGCTTTCCCTTTGGTCCCTCTGCGCCTTTCGATCCTTaGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: CFPFGPSAPFDP*GPGHPRGPGCP
Trigger: CGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGCAGAGGGACCAAAGGGAAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGCTCCTAAGTCACCAATaGGGCCGGGGACTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRLLSHQ*GRGLQG
Trigger: CCCCTGGAGTCCCCGGCCTCATTGGTGACTTAGGAG...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCTTCCCTCCTCCGTaGGGCCTAGAGTGGCCACGA +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLLFPPP*GLEWPR
Trigger: TCGTGGCCACTCTAGGCCTCACGGAGGAGGGAAGAG...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCCTTTTGGAGGCGGGCTaGTGGCGGTCCCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQALLEAG*WRSPEA
Trigger: TGCCTCCGGGGACCGCCAGCAGCCCGCCTCCAAAAG...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGGAGGCTCAGCACCAGTaGCAGCTCTGTGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGREAQHQ*QLCAQG
Trigger: GCCTTGGGCACAGAGCTGGCACTGGTGCTGAGCCTC...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCGTTTGTGGGTGCTGGTaGGGGCAGAGGCCGGCTTAC +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLVCGCW*GQRPAY
Trigger: GTAAGCCGGCCTCTGCCCGCACCAGCACCCACAAAC...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGAAGATCGAATAGCCACTaGTCGTGGGCCGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGRSNSH*SWAGGW
Trigger: CCAGCCCCCGGCCCACGAGCAGTGGCTATTCGATCT...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCAATGTAGCCCCTGCTaGCTTTGGGGCCGGGATCTC +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAQCSPC*LWGRDL
Trigger: GAGATCCCGGCCCCAAAGGCAGCAGGGGCTACATTG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCACCAGCCACACCCTaGTGTCCAGGCCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQASPATP*CPGRPG
Trigger: ACCGGGCCGGCCTGGACAGCAGGGTGTGGCTGGTGA...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GACCTCCTTACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGTCACCAGCCACACCCTaGTGTCCAGGCCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: DLLTIDPLGPGTPGGPIMSPATP*CPGRPG
Trigger: ACCGGGCCGGCCTGGACAGCAGGGTGTGGCTGGTGA...CATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGCCCGGTTCTCCCACTaGACCAGGCGGCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWARFSH*TRRPLG
Trigger: CCCAAGGGGCCGCCTGGTGCAGTGGGAGAACCGGGC...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTTGCCCAATGAGGCCCTaGTCCCCAGGAGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGCPMRP*SPGVPR
Trigger: CCTGGGCACTCCTGGGGAGCAGGGCCTCATTGGGCA...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp TACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCCTCCTTGGGCCCCCATaGGTCCCGGAGCACCCGTTG +
Preference number: 4 (lower is better)
Translates to: YHRPLGSRHAWGSHHATILLGPP*VPEHPL
Trigger: CAACGGGTGCTCCGGGACGCATGGGGGCCCAAGGAG...GATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCTTTCCACGGAGGCCTTaGACACCCTCCTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAFPRRP*TPSCPG
Trigger: CCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAA...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCGAGGGGCCCGACGATaGCTTCCTTTCCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGRGARR*LPFPSS
Trigger: GCTTGATGGGAAAGGAAGGCATCGTCGGGCCCCTCG...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GCTTTCCACGGAGGCCTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGAGGTTTGTGGGTGCTaGTGCGGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AFHGGLAHPPVQGTQGLPEVCGC*CGQRPA
Trigger: AGCCGGCCTCTGCCCGCACCAGCACCCACAAACCTC...CGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCGCTGGTGCCCGAAGTTaGAGGTACCATCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAAGARS*RYHRGW
Trigger: CCAGCCACGATGGTACCTCCAACTTCGGGCACCAGC...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCTCCGGGGGCTGCTCTTaGGTCCGGCTTTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHASGGCS*VRLSLR
Trigger: CCTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGA...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGATGCCAGGGTAACCTTTaGCCCCTGGGCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGCQGNL*PLGCPQ
Trigger: CTGAGGGCAGCCCAGGGGCCAAAGGTTACCCTGGCA...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCAGGCCGAAGAGCCCTaGGAGCCCAATGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLQAEEP*EPNVAP
Trigger: AGGGGCTACATTGGGCTCCCAGGGCTCTTCGGCCTG...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGACCGACCAGGATCCCCTaGTTCCCCCTTCACGCCATC +
Preference number: 4 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGPTRIP*FPLHAI
Trigger: GATGGCGTGAAGGGGGAACCAGGGGATCCTGGTCGG...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GCTTTCCACGGAGGCCTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGTGGGCCTCGAGATCCTaGAGGACCCTGGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AFHGGLAHPPVQGTQGLPWASRS*RTLGSR
Trigger: CCTGGACCCCAGGGTCCTCCAGGATCTCGAGGCCCA...CGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCGCCAGGAAGCCCATCTaGTCCAGCGATGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLARKPI*SSDALE
Trigger: CTCGAGGGCATCGCTGGACCAGATGGGCTTCCTGGC...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GCTTTCCACGGAGGCCTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGCTGCCCAAGGACCCTTaGGCAGGGGAGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AFHGGLAHPPVQGTQGLPLPKDP*AGELPL
Trigger: GAGAGGCAGCTCCCCTGCCCAAGGGTCCTTGGGCAG...CGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 72 bp CTGGGCAGACAACAGCTGGGGTCTGCCCAAGGACCCTaGGGCAGGGGAGCTGCCTCTCCTGGAGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: LGRQQLGSAQGP*GRGAASPGAIC
Trigger: GCAGATGGCTCCAGGAGAGGCAGCTCCCCTGCCCAAGGGTCCTTGGGCAGACCCCAGCTGTTGTCTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
3UTR CAA 72 bp ATCAAGCCAGGTGGCCCCCGAGGGCCCTGGATGCCTTaGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: IKPGGPRGPWMP*KPMSPGGPLGP
Trigger: CGGACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCCACCTGGCTTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 72 bp CTCGGACCTTGCAATCCCCAGTCCCCACGGCTGCCTTaGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGPCNPQSPRLP*SPFGPGSPEGP
Trigger: GGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGGACTGGGGATTGCAAGGTCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 72 bp ATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTaGGCTGGGGTCTGCCCAGTGCCCTCCTGCCACACG +
Preference number: 4 (lower is better)
Translates to: ICPFQARKRTAC*AGVCPVPSCHT
Trigger: CGTGTGGCAGGAGGGCACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCAGAGCAAGGCCGGGTaGGGGCGCGCGGAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGQSKAG*GRAEGG
Trigger: ACCGCCCTCCGCGCGCCCTCACCCGGCCTTGCTCTG...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCTGCCTGCTGGCAGTaGCCCCAGGGCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSPACWQ*PQGWCG
Trigger: GCCACACCAGCCCTGGGGTCACTGCCAGCAGGCAGG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCGCTTGCGTTTCTGGCTaGGGACAGCGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAACVSG*GQRRGR
Trigger: CCTTCCTCTTCGCTGTCCGCAGCCAGAAACGCAAGC...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCGGTGGACGACCGTCTTaGCGGGGAGGAACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQAGGRPS*RGGTAG
Trigger: GCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACC...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAGGTGGGCGTGGCGGGTaGCACAGTCCCCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGGGRGG*HSPPGS
Trigger: GGACCCAGGGGGACTGTGGCACCCGCCACGCCCACC...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGCTTTGGCCCCTGGGCTaGCCTCAGGTCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWLWPLG*PQVLAA
Trigger: GGCAGCCAGGACCTGAGGGCAGCCCAGGGGCCAAAG...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCAGGTAACCCCTGCCTaGCAGGGTAACCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLQVTPA*QGNLWP
Trigger: GGGCCAAAGGTTACCCTGGCAGGCAGGGGTTACCTG...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGCCCTGGCTTCCCCCGTaGACCGGGGAACCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWPWLPP*TGEPWQ
Trigger: TTGCCAGGGTTCCCCGGTGCACGGGGGAAGCCAGGG...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGGGTCCAGGGTCTCCAGGGACGCCCATCTCACCCAGCTGTCCTTGATAGCCCTGCCCCGACGTCCCTTTaGTCCCCTCATGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GVQGLQGRPSHPAVLDSPAPTSL*SPHAWW
Trigger: CCACCAGGCATGAGGGGAGCAAAGGGACGTCGGGGC...AGGGCTATCAAGGACAGCTGGGTGAGATGGGCGTCCCTGGAGACCCTGGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCTCCCTGCTCCCCCTaGTGTCCTGCTTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQASPCSP*CPACPS
Trigger: GGACGGGCAAGCAGGACAGCAGGGGGAGCAGGGAGA...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGGGTCCAGGGTCTCCAGGGACGCCCATCTCACCCAGCTGTCCTTGATAGCCCTTCTCCCTGCTCCCCCTaGTGTCCTGCTTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: GVQGLQGRPSHPAVLDSPSPCSP*CPACPS
Trigger: GGACGGGCAAGCAGGACAGCAGGGGGAGCAGGGAGA...AGGGCTATCAAGGACAGCTGGGTGAGATGGGCGTCCCTGGAGACCCTGGACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCTTTCTGGGGTCTGCCCAGTaGCCTCCTGCCACACGGTCA +
Preference number: 4 (lower is better)
Translates to: DPLGPGTPGGPIMPRSPFLGSAQ*PPATRS
Trigger: TGACCGTGTGGCAGGAGGGCACTGGGCAGACCCCAG...AAAGGGTGATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCTCTCCTGGAGCCATCTaGCCCTCAGTACCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPSPGAI*PSVPSP
Trigger: AGGGGAGGGTACTGAGGGGCAGATGGCTCCAGGAGA...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCACAACAGCTGGGGTCTaGCCAAGGACCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLTTAGV*PRTLGQ
Trigger: CTGCCCAAGGGTCCTTGGGCAGACCCCAGCTGTTGT...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCGGGCTGGTGTGGCAGTaGTCAAGTTCTCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAGLVWQ*SSSPGL
Trigger: TAGGCCTGGAGAACTTGACCACTGCCACACCAGCCC...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCTTTGGGGCTTGGTaGGCGTGGCGGGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQASFGAW*AWRVPQ
Trigger: CTGTGGCACCCGCCACGCCCACCAAGCCCCAAAGGA...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCGACTCTGGCAGGAACTaGACGGGAAGTAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHADSGRN*TGSRWH
Trigger: GTGCCACCTACTTCCCGTCCAGTTCCTGCCAGAGTC...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp TACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCCCGGGTTCCTCTGGATaGGCTTCTCTGCGGGACGGG +
Preference number: 4 (lower is better)
Translates to: YHRPLGSRHAWGSHHATIPGSSG*ASLRDG
Trigger: CCCGTCCCGCAGAGAAGCCCATCCAGAGGAACCCGG...GATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCAGGTACCATCGTGGCTaGTGGCCGAGTACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHARYHRG*WPSTPG
Trigger: ACCAGGAGTACTCGGCCACCAGCCACGATGGTACCT...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGAGGGCCGGGGAGACCTaGATTTCCATAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRRAGET*ISIRPR
Trigger: CCTGGGCCTTATGGAAATCCAGGTCTCCCCGGCCCT...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGAAACCCTGGCAACCCCTaGCTCCCCTTGTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGNPGNP*LPLSPW
Trigger: CCAAGGAGACAAGGGGAGCCAGGGGTTGCCAGGGTT...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GACCTCCTTACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGTCCTGGAGGCCCAATTaGCCCCTGGGGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: DLLTIDPLGPGTPGGPIMSWRPN*PLGSLR
Trigger: CCTCAGGGACCCCAGGGGCCAATTGGGCCTCCAGGA...CATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGTTCTCCATCAGGCCCTaGGTCTCCCCTGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRFSIRP*VSPVPL
Trigger: AAGGGGGACAGGGGAGACCCAGGGCCTGATGGAGAA...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGTCCCAGCAGGGCCCATaGGGCCAGGGTCCCCATCGT +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWSQQGP*GQGPHR
Trigger: ACGATGGGGACCCTGGCCCCATGGGCCCTGCTGGGA...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTAGGTCCAGCTTACTCTaGCTGGCTCTTTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGRSSLL*LALWLV
Trigger: GACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCT...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGCAGAGCGTCCAGGCTaGGGCGGCAGGGCGAGGATA +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWAERPG*GGRARI
Trigger: TATCCTCGCCCTGCCGCCCCAGCCTGGACGCTCTGC...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CAA 72 bp AGGGTCTCCAGGGACGCCCATCTCACCCAGCTGTCCTaGATAGCCCTTGGCACCCTTGGCTCCAGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RVSRDAHLTQLS*IALGTLGSSAA
Trigger: GGCCGCACTGGAGCCAAGGGTGCCAAGGGCTATCAAGGACAGCTGGGTGAGATGGGCGTCCCTGGAGACCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCAAGGCGGCAGGAATaGCGGTGCCCGTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSPRRQE*RCPWEP
Trigger: AGGCTCCCACGGGCACCGTCATTCCTGCCGCCTTGG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCGGTGGCACTTGCTTCTaGGTGGGTAGGGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGGGTCF*VGRADF
Trigger: AAAGTCAGCCCTACCCACTCAGAAGCAAGTGCCACC...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGCTAGCAGGGACCAGCTaGCGAGACGCCCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWLAGTS*RDAPFP
Trigger: AGGGAAGGGGGCGTCTCGTCAGCTGGTCCCTGCTAG...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTTGCCGGGGAGGAACTaGAGGCCCAGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQALPGRN*RPSCSL
Trigger: CAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAA...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCGTTTGTGGGTGCTGGTaGGGGCAGAGGCCGGCTTAC +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQAVCGCW*GQRPAY
Trigger: GTAAGCCGGCCTCTGCCCGCACCAGCACCCACAAAC...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCCTCAGGTCCTGGCTaGCCCTGTTCTCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSPSGPG*PCSPGC
Trigger: GCACCCCGGAGAACAGGGGCAGCCAGGACCTGAGGG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCGGCATACCCATCTTaGCCCTCTTGCCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFPAYPS*PSCQER
Trigger: GCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGG...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCTGGGGCCCCTGCCTTaGCTTGCTTTCCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFLGPLP*LAFPLV
Trigger: GACCAAAGGGAAAGCAAGGCAAGGCAGGGGCCCCAG...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCAGAGGCTGGGAGCATaGGATCAAGTGCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAQRLGA*DQVRYW
Trigger: CCAGTAACGCACTTGATCCCATGCTCCCAGCCTCTG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGTGGGCGGTGGGGGCCTaGGCATTCCCGGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPEWAVGA*AFPGSS
Trigger: AGAGGAACCCGGGAATGCCCAGGCCCCCACCGCCCA...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp TACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCCGGCAGGTGCTGTTCTaGGAGTGCTGGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: YHRPLGSRHAWGSHHATIRQVLF*ECWCPK
Trigger: CTTCGGGCACCAGCACTCCCAGAACAGCACCTGCCG...GATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCTTTGAGCTGAGCCAGGAGTaGGGACGGCAGGTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DPLGPGTPGGPIMPRSPFELSQE*GRQVLF
Trigger: GAACAGCACCTGCCGTCCCCACTCCTGGCTCAGCTC...AAAGGGTGATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGGCTTCTTGCTTCCAGTaGGAGCTGAGCCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRASCFQ*ELSQEW
Trigger: CCACTCCTGGCTCAGCTCCCACTGGAAGCAAGAAGC...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCTTTGTAACCTTTGGCCCCTaGGCTGCCCTCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DPLGPGTPGGPIMPRSPFVTFGP*AALRSW
Trigger: CCAGGACCTGAGGGCAGCCCAGGGGCCAAAGGTTAC...AAAGGGTGATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCTTCTCCATCAGACCCTaGCAGGCCGAAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFFSIRP*QAEEPW
Trigger: CCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAA...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATGGGGCCGATGTCTCCTaGGAATCCCTCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHGADVS*ESLGSR
Trigger: CCTGGACCCGAGGGATTCCCAGGAGACATCGGCCCC...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCACCCTTCATGCCTTCTaGGCCATTGTCGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFTLHAF*AIVARG
Trigger: CCCCCTGGCGACAATGGCCCAGAAGGCATGAAGGGT...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATGATCCTGGAGGACCCTaGGGTCCAGGCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHDPGGP*GPGSPG
Trigger: CCCTGGAGAGCCTGGACCCCAGGGTCCTCCAGGATC...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGACCCTTGCTCCCCAGCTaGTCCGTCCGGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGPLLPS*SVRSSG
Trigger: CCCCGAGGACCGGACGGACCAGCTGGGGAGCAAGGG...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTTTCTCCATCAGGCCCTaGGTCTCCCCTGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGFSIRP*VSPVPL
Trigger: AAGGGGGACAGGGGAGACCCAGGGCCTGATGGAGAA...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATTCCCATCAAGCCAGGTaGCCCCCGAGGGCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHSHQAR*PPRALD
Trigger: ATCCAGGGCCCTCGGGGGCCACCTGGCTTGATGGGA...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGGTGTCCATCCACGTCTaGAAAGCTGCCCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPVSIHV*KAAPRS
Trigger: TGATCTTGGGGCAGCTTTCCAGACGTGGATGGACAC...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCATAGCTGTAACTCTCTaGCCTGAGTGCTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPIAVTL*PECSTG
Trigger: ACCAGTGGAGCACTCAGGCCAGAGAGTTACAGCTAT...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCAGCACCAGCCGGTCTaGATAGCTGTAACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAQHQPV*IAVTLW
Trigger: CCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GGGGTCCAGGGTCTCCAGGGACGCCCATCTCACCCAGCTGTCCTTGATAGCCCTAGCCCATGTCACCTTTaGCTCCAGGAGGGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GVQGLQGRPSHPAVLDSPSPCHL*LQEGRG
Trigger: TCCCCGGCCCTCCTGGAGCCAAAGGTGACATGGGCT...AGGGCTATCAAGGACAGCTGGGTGAGATGGGCGTCCCTGGAGACCCTGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGGGTGGCACTTGCTTCTaGGTGGGTAGGGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRGGTCF*VGRADF
Trigger: AAAGTCAGCCCTACCCACTCAGAAGCAAGTGCCACC...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCCCTTCCTGCCAGGCTaGCCCTCCAAGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGPFLPG*PSKPGA
Trigger: GGCCCCTGGCTTGGAGGGTCAGCCTGGCAGGAAGGG...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGACTCCCCGTTGCCCAATaGGGCCCTGCTCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGLPVAQ*GPAPQE
Trigger: CTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAG...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp TACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCACTCTCACCCTTaGATCCTGGGGGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: YHRPLGSRHAWGSHHATITHSHP*ILGVPV
Trigger: CACAGGGACCCCCAGGATTCAAGGGTGAGAGTGGGT...GATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCTCATCTGGACCCGGCTaGTGGCAAACTCGACCTTGG +
Preference number: 4 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFSSGPG*WQTRPW
Trigger: CCAAGGTCGAGTTTGCCATCAGCCGGGTCCAGATGA...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCGCCGCGCTCGCCCCTaGCTCGGTCCTTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSRRARP*LGPFLL
Trigger: AAGCAGAAAAGGACCGAGGCAGGGGCGAGCGCGGCG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAGGGGAGGTTTGTGGGTaGTGGTGCGGGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGGEVCG*WCGQRP
Trigger: CGGCCTCTGCCCGCACCAGCACCCACAAACCTCCCC...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCTTCTGGGAGTGCTGGTaGCCGAAGTTGGAGGTACCA +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLFWECW*PKLEVP
Trigger: TGGTACCTCCAACTTCGGGCACCAGCACTCCCAGAA...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGAGATCGAATAGCCACTaGTCGTGGGCCGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWRSNSH*SWAGGW
Trigger: CCAGCCCCCGGCCCACGAGCAGTGGCTATTCGATCT...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCGCCCATGTCACCCTTTaGCCCATCGTGGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQAAHVTL*PIVGLS
Trigger: GGAAAGGCCCACGATGGGGCAAAGGGTGACATGGGC...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GACCTCCTTACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCAGGAAACCCCTTCCTaGCAGGCTGACCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: DLLTIDPLGPGTPGGPIMQETPS*QADPPS
Trigger: GCTTGGAGGGTCAGCCTGGCAGGAAGGGGTTTCCTG...CATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATCACCCTTGGCTCCAGTaGGGCCCTTCTCGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHHPWLQ*GPSRLA
Trigger: AGCAAGGCGAGAAGGGCCGCACTGGAGCCAAGGGTG...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCTTGGGCCCCCATaGGTCCCGGAGCACCCGTTG +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHLLGPP*VPEHPL
Trigger: CAACGGGTGCTCCGGGACGCATGGGGGCCCAAGGAG...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCGGCCTGGGGCCCCTaGCTTGCCTTGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSPAWGP*LALLSL
Trigger: AAGGGAAAGCAAGGCAAGGCAGGGGCCCCAGGCCGG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGTCCCCATCGTCTCCCTaGTCCCCCTGCTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWSPSSP*SPCCPA
Trigger: AGCAGGACAGCAGGGGGAGCAGGGAGACGATGGGGA...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCGGCCATCTTGGACCTTaGAGCCATCCATGGACACCT +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLGHLGP*SHPWTP
Trigger: AGGTGTCCATGGATGGCTGCAAGGTCCAAGATGGCC...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGAACTTCCAGGCGGTACTaGTTCCCTGATGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGTSRRY*FPDEAG
Trigger: TCCTGCCTCATCAGGGAAGCAGTACCGCCTGGAAGT...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCGCCGGGACCCGAGGTaGACGACCGTCTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LKVDRLTSWDKNQPGGLCRRDPR*TTVLPG
Trigger: CCCCGGCAAGACGGTCGTCCACCTCGGGTCCCGGCG...ACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGAGGGCGAGGTCGGACTaGAAGGTAAAAGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRRARSD*KVKGLP
Trigger: TGGCAGACCTTTTACCTTCCAGTCCGACCTCGCCCT...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTTTGGAGGTACCATCGTaGCTGGTGGCCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGLEVPS*LVAEYS
Trigger: GGAGTACTCGGCCACCAGCCACGATGGTACCTCCAA...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCCTGTTCTGGGAGTGCTaGTGCCCGAAGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPLFWEC*CPKLEV
Trigger: TACCTCCAACTTCGGGCACCAGCACTCCCAGAACAG...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGAGCTGAGCCAGGAGTaGGGACGGCAGGTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWELSQE*GRQVLF
Trigger: GAACAGCACCTGCCGTCCCCACTCCTGGCTCAGCTC...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACTCGTGGGCCGGGGGCTaGAGGACAGGAATTGCGCCG +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHSWAGG*RTGIAP
Trigger: CGGCGCAATTCCTGTCCTCCAGCCCCCGGCCCACGA...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCTCGTCCCGGAGGTCCTaGATTCCCGGAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TLWPECSTGVHPRLESCPSSRRS*IPGEPR
Trigger: CCTGGGCTCTCCGGGAATCCAGGACCTCCGGGACGA...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCGCCCGGGAAACCCAATaGATCCTTTGTCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAARETQ*ILCLRL
Trigger: AAGTCGGAGACAAAGGATCCATTGGGTTTCCCGGGC...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGGTCCCATCTCTCCTaGAGGCCCAATTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWGSHLS*RPNWPL
Trigger: CAGGGGCCAATTGGGCCTCCAGGAGAGATGGGACCC...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCACCAGGCGGCCCCTTaGGTCCCATCTCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSHQAAP*VPSLLE
Trigger: CTCCAGGAGAGATGGGACCCAAGGGGCCGCCTGGTG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGAGCCCTTGGCACCCTTaGCTCCAGTGCGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWSPWHP*LQCGPS
Trigger: AGAAGGGCCGCACTGGAGCCAAGGGTGCCAAGGGCT...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGCTCCAGGCGGGCCCTTaGGTCCGAAGAGACCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPELQAGP*VRRDLP
Trigger: TGGCAGGTCTCTTCGGACCCAAGGGCCCGCCTGGAG...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGAAGCTGTTGGGGGTCTTaGGTCCGGAAGGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGSCWGS*VRKVKS
Trigger: ACTCTTCACCTTCCGGACCCAAGACCCCCAACAGCT...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAGCCCCCAGGGTCGAGTaGAGGGTCCCTGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGAPRVE*RVPVER
Trigger: CCTTTCCACAGGGACCCTGCACTCGACCCTGGGGGC...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGGTGGGCGTGGCGGGTaGCACAGTCCCCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLGGRGG*HSPPGS
Trigger: GGACCCAGGGGGACTGTGGCACCCGCCACGCCCACC...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCTGGATGGGCTTCTCTaGGGGACGGGAGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSLDGLL*GTGDSG
Trigger: GCCAGAGTCTCCCGTCCCGCAGAGAAGCCCATCCAG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCGCCCAATGTAGCCCCTaGTGCCTTTGGGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSAQCSP*CLWGRD
Trigger: ATCCCGGCCCCAAAGGCAGCAGGGGCTACATTGGGC...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCGGGCTCCCCCACGCTaGCCATCAGTCCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMRAPPR*PSVPSC
Trigger: GCATGAAGGGACTGATGGGCAGCGTGGGGGAGCCCG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCCTGGCTCTCCCCGTTaGCCAATGAGGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHPGSPR*PMRPCS
Trigger: GGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGG...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGTGCCCGGGTTGGCCCTaGTGGCCTGGCTTTCCACGG +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGCPGWP*WPGFPR
Trigger: CCGTGGAAAGCCAGGCCAGCAGGGCCAACCCGGGCA...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCCCTGCTGTCCTGCTTaGCCGTCCCTGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMPCCPA*PSLPGS
Trigger: GCTTCCTGGCAGGGACGGGCAAGCAGGACAGCAGGG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTCCCCCTGCTGTCCTaGTTGCCCGTCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGLPLLS*LPVPAR
Trigger: CCTGGCAGGGACGGGCAAGCAGGACAGCAGGGGGAG...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGCCATCCACCATCTTCTaGTCACAGTCCATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRPSTIF*SQSMRS
Trigger: GGACCTCATGGACTGTGAGCAGAAGATGGTGGATGG...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTAGCTCGAGGGCCAGGTaGTGCCAGCGCCCGTCGTGC +
Preference number: 4 (lower is better)
Translates to: GQGHKASRAQVHLWSLACSSRAR*CQRPSC
Trigger: GCACGACGGGCGCTGGCACCACCTGGCCCTCGAGCT...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCGGTAGCAGCGGGGTTTaGGCTGGGCCTCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPGSSGV*AGPPTA
Trigger: GGCGGTGGGAGGCCCAGCCCAAACCCCGCTGCTACC...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCCATGGCTGGTTATCTTaGCCTCAGTCCGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPHGWLS*PQSELV
Trigger: CACTAGCTCGGACTGAGGCCAAGATAACCAGCCATG...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTTACCATCGTGGCTGGTaGCCGAGTACTCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGYHRGW*PSTPGR
Trigger: TCTACCAGGAGTACTCGGCCACCAGCCACGATGGTA...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACATACCAGGGCCGGGGTaGTCTGCTGACTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHIPGPG*SADWAG
Trigger: CCCAGCCCAGTCAGCAGACCACCCCGGCCCTGGTAT...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCCCTTTCTGTCCTTTaGCTCCAGGAGGGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSPLSVL*LQEGRG
Trigger: TCCCCGGCCCTCCTGGAGCCAAAGGACAGAAAGGGG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGGCTGCCCTCAGGTCCTaGCTGCCCCTGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGAALRS*LPLFSG
Trigger: CCCGGAGAACAGGGGCAGCCAGGACCTGAGGGCAGC...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCGACCAGGATCCCCTaGTTCCCCCTTCACGCCATC +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSPTRIP*FPLHAI
Trigger: GATGGCGTGAAGGGGGAACCAGGGGATCCTGGTCGG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCGGGTCCCATCTCTCCTaGAGGCCCAATTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TLWPECSTGVHPRLESCPGSHLS*RPNWPL
Trigger: CAGGGGCCAATTGGGCCTCCAGGAGAGATGGGACCC...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCACCAGGCGGCCCCTTaGGTCCCATCTCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMHQAAP*VPSLLE
Trigger: CTCCAGGAGAGATGGGACCCAAGGGGCCGCCTGGTG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCTCCCGGAGCACCCGTTaGTCCCAGGCTGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPSRSTR*SQAAPG
Trigger: TCCCGGGGCAGCCTGGGACCAACGGGTGCTCCGGGA...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGCCAGAGTCGCCCGGCTaGCCTTTGGACCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWPESPG*PLDPGS
Trigger: GGAGCCTGGGTCCAAAGGCCAGCCGGGCGACTCTGG...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGGTGTCCATCCACGTCTaGAAAGCTGCCCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRVSIHV*KAAPRS
Trigger: TGATCTTGGGGCAGCTTTCCAGACGTGGATGGACAC...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCGGGAGCTGCCTCTCCTaGAGCCATCTGCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSGSCLS*SHLPLS
Trigger: ACTGAGGGGCAGATGGCTCCAGGAGAGGCAGCTCCC...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCGGGAGCTGCCTCTCCTaGAGCCATCTGCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TLWPECSTGVHPRLESCPGSCLS*SHLPLS
Trigger: ACTGAGGGGCAGATGGCTCCAGGAGAGGCAGCTCCC...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCCTCTGGCTGGCTCTTTaGTTGGTCTTTGGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPLWLAL*LVFGAK
Trigger: CTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 72 bp CTGGCATTCCAGGATGACCTCCTTACCATCGACCCCTaGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCA +
Preference number: 4 (lower is better)
Translates to: LAFQDDLLTIDP*GPGTPGGPIMP
Trigger: TGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTCATCCTGGAATGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
3UTR CAA 72 bp TTTGTGTCCATCATAACCAGCCAGTCCCGGTTCTCCTaGGGCCCCCATGCGTCCCGGAGCACCCGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: FVSIITSQSRFS*GPHASRSTRWS
Trigger: GGACCAACGGGTGCTCCGGGACGCATGGGGGCCCAAGGAGAACCGGGACTGGCTGGTTATGATGGACACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp CACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCCAAGGCGGCAGGAATaGCGGTGCCCGTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HMAKVIKQAEPRSTSGVWPRRQE*RCPWEP
Trigger: AGGCTCCCACGGGCACCGTCATTCCTGCCGCCTTGG...CCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTGCCGGGGTGGTCTGCTaGCTGGGCTGGGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISAGVVC*LGWGCL
Trigger: CAGACAGCCCCAGCCCAGTCAGCAGACCACCCCGGC...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAGTGGGCCTTTCCTGGTaGGAGCCCTGGGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGVGLSW*EPWVPF
Trigger: AAAGGGGACCCAGGGCTCTCACCAGGAAAGGCCCAC...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCTCTGTCCACCATGAGTaGAGTTGCAGGAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFSVHHE*SCRRPR
Trigger: TCGAGGTCTCCTGCAACTTCACTCATGGTGGACAGA...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp TACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCAAGGTGAAGAGTGTCTaGTGCCAGCGGCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: YHRPLGSRHAWGSHHATIKVKSV*CQRPSW
Trigger: CCAAGATGGCCGCTGGCATCAGACACTCTTCACCTT...GATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp GACCTCCTTACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGTCCCTCAAGTTGGCTTaGATGTGGGGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: DLLTIDPLGPGTPGGPIMSLKLA*MWGSLG
Trigger: GCCCAAAGAGCCCCACATTCAAGCCAACTTGAGGGA...CATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATCCTGGCATTCCAGGATaGCCTCCTTACCATCGACCC +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHPGIPG*PPYHRP
Trigger: GGGTCGATGGTAAGGAGGTCATCCTGGAATGCCAGG...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACGGCCCAGCTGCAGCTTaGGTTTCTGGCTGCGGACAG +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHGPAAA*VSGCGQ
Trigger: CTGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCC...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTACAGGCACCCGGCGCTaGCCGCAGGCAGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: GQGHKASRAQVHLWSLACTGTRR*PQAVTR
Trigger: TCTGGTGACTGCCTGCGGGCAGCGCCGGGTGCCTGT...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp ATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGGGGGAGGTTTGTGGGTaGTGGTGCGGGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: MLKVDRLTSWDKNQPGGLGEVCG*WCGQRP
Trigger: CGGCCTCTGCCCGCACCAGCACCCACAAACCTCCCC...CAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGCTTTGTCTCCGACTTTaGCCAGAGGCCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWLCLRL*PEALAS
Trigger: GGAAGCCAGGGCCTCTGGGCAAAGTCGGAGACAAAG...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCCAAGGGGTCCCACAATaGCTTTGTGTCCATCATAAC +
Preference number: 4 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAQGVPQ*LCVHHN
Trigger: GTTATGATGGACACAAAGGCATTGTGGGACCCCTTG...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCTTTTCCCTTTGGTCCCTCTaGGCCTTTCGATCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: DPLGPGTPGGPIMPRSPFSLWSL*AFRSFG
Trigger: CCCAAAGGATCGAAAGGCGCAGAGGGACCAAAGGGA...AAAGGGTGATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGCCCCTGCCTTGCCTTaGTTTCCCTTTGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWAPALP*FPFGPS
Trigger: AGAGGGACCAAAGGGAAAGCAAGGCAAGGCAGGGGC...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCAGGGAGCCCCGTTCTaGCCTCTGTTCCTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMQGAPF*PLFLAC
Trigger: GCAAGCGAGGAACAGAGGGCAGAACGGGGCTCCCTG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCTCGGAGCTTAGCAGGTaGAGGAAATTCATCTGGACC +
Preference number: 4 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPSELSR*RKFIWT
Trigger: GGTCCAGATGAATTTCCTGCACCTGCTAAGCTCCGA...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GGGGTCCAGGGTCTCCAGGGACGCCCATCTCACCCAGCTGTCCTTGATAGCCCTCAGTGGATGGTGATGTaGTGGGTCACCTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GVQGLQGRPSHPAVLDSPQWMVM*WVTSEL
Trigger: AAGCTCCGAGGTGACCCAGCACATCACCATCCACTG...AGGGCTATCAAGGACAGCTGGGTGAGATGGGCGTCCCTGGAGACCCTGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCGGAAGCGTACGGCCTaGTTGGCTGGGGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGRKRTA*LAGVCP
Trigger: TGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCG...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGCGGAAGCGTACGGCCTaGTTGGCTGGGGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWRKRTA*LAGVCP
Trigger: TGGGCAGACCCCAGCCAAGCAGGCCGTACGCTTCCG...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCACAACAGCTGGGGTCTaGCCAAGGACCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSTTAGV*PRTLGQ
Trigger: CTGCCCAAGGGTCCTTGGGCAGACCCCAGCTGTTGT...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACAGGGCCAAGCCAACATaGTTCGCACCCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHRAKPT*FAPRPP
Trigger: GGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCT...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTGTGCCCGTGGGAGCCTaGAGCCGGGCCCGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCVPVGA*SRARCV
Trigger: TACGCAGCGGGCCCGGCTCCAGGCTCCCACGGGCAC...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGTGCAGCTTGCGTTTCTaGCTGCGGACAGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWCSLRF*LRTAKR
Trigger: CCTCTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCA...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGAGAGCACCTTCAAACTaGACTGCATGCGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRRAPSN*TACGFI
Trigger: GATGAACCCGCATGCAGTCCAGTTTGAAGGTGCTCT...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCGGGGCTTGGTGGGCGTaGCGGGTGCCACAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PHIFRVSPGKFQSHLNQLGAWWA*RVPQSP
Trigger: GGGGGACTGTGGCACCCGCCACGCCCACCAAGCCCC...GAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTGGTAGCAGCGGGGTTTaGGCTGGGCCTCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISGSSGV*AGPPTA
Trigger: GGCGGTGGGAGGCCCAGCCCAAACCCCGCTGCTACC...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GACCTCCTTACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGTGGACGGGAAGTAGGTaGCACTTGCTTCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: DLLTIDPLGPGTPGGPIMWTGSR*HLLLSG
Trigger: CCCACTCAGAAGCAAGTGCCACCTACTTCCCGTCCA...CATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATGACTCTGGCAGGAACTaGACGGGAAGTAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHDSGRN*TGSRWH
Trigger: GTGCCACCTACTTCCCGTCCAGTTCCTGCCAGAGTC...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGAATGGGGGAGGTTTGTaGGTGCTGGTGCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPENGGGL*VLVRAE
Trigger: CTCTGCCCGCACCAGCACCCACAAACCTCCCCCATT...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATGCTTCTTGCTTCCAGTaGGAGCTGAGCCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHASCFQ*ELSQEW
Trigger: CCACTCCTGGCTCAGCTCCCACTGGAAGCAAGAAGC...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTTCGTGGGCCGGGGGCTaGAGGACAGGAATTGCGCCG +
Preference number: 4 (lower is better)
Translates to: GQGHKASRAQVHLWSLACSWAGG*RTGIAP
Trigger: CGGCGCAATTCCTGTCCTCCAGCCCCCGGCCCACGA...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGATGCCAGGGTAACCTTTaGCCCCTGGGCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGCQGNL*PLGCPQ
Trigger: CTGAGGGCAGCCCAGGGGCCAAAGGTTACCCTGGCA...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACTTGGCCCTGCTGGCCTaGCTTTCCACGGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHLALLA*LSTEAL
Trigger: CAAGGCCTCCGTGGAAAGCCAGGCCAGCAGGGCCAA...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCCGGGTTGGCCCTGCTaGCCTGGCTTTCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPPGWPC*PGFPRR
Trigger: CCTCCGTGGAAAGCCAGGCCAGCAGGGCCAACCCGG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGAGACCTGCCATTCCTaGGAAGCCCATCTCGCCAGA +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWETCHS*EAHLAR
Trigger: TCTGGCGAGATGGGCTTCCCAGGAATGGCAGGTCTC...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GACCTCCTTACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGTGGATGGTGATGTGCTaGGTCACCTCGGAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: DLLTIDPLGPGTPGGPIMWMVMC*VTSELS
Trigger: GCTAAGCTCCGAGGTGACCCAGCACATCACCATCCA...CATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCTGGGCAGACAACAGCTaGGGTCTGCCCAAGGACCCT +
Preference number: 4 (lower is better)
Translates to: TLWPECSTGVHPRLESCPWADNS*GLPKDP
Trigger: AGGGTCCTTGGGCAGACCCCAGCTGTTGTCTGCCCA...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCGGCTGGCTCTTTGGTTaGTCTTTGGGGCTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQAGWLFG*SLGLSW
Trigger: CCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCC...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCCAGCTTACTCTGGCTaGCTCTTTGGTTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLPAYSG*LFGWSL
Trigger: CAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGG...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCTTTCCAGCGATTTCACAGTaGGAGGTAGCAAACGTGGGC +
Preference number: 4 (lower is better)
Translates to: DPLGPGTPGGPIMPRSPFPAISQ*EVANVG
Trigger: GCCCACGTTTGCTACCTCCCACTGTGAAATCGCTGG...AAAGGGTGATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGTTACCATCGACCCCTTaGGTCCAGGCACGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMLPSTP*VQARLG
Trigger: CCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAA...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp CCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCGAGGTCGAAGGCCACTaGGCGCCGGGACCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: PHIFRVSPGKFQSHLNQLEVEGH*APGPEV
Trigger: CACCTCGGGTCCCGGCGCTCAGTGGCCTTCGACCTC...GAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAGGCTGTGATCTTCTGTaGTGGTTGAGCGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGGCDLL*WLSGRR
Trigger: CCTGCGGCCGCTCAACCATCACAGAAGATCACAGCC...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCGGGTCCGGCTTTCTTTaGGGCTTCCGATCCAATGGG +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSGSGFL*GFRSNG
Trigger: CCCATTGGATCGGAAGCCTCAAAGAAAGCCGGACCC...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGGGGTCCGGCTTTCTTTaGGGCTTCCGATCCAATGGG +
Preference number: 4 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPEGSGFL*GFRSNG
Trigger: CCCATTGGATCGGAAGCCTCAAAGAAAGCCGGACCC...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTGCCGGGGTGGTCTGCTaGCTGGGCTGGGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCAGVVC*LGWGCL
Trigger: CAGACAGCCCCAGCCCAGTCAGCAGACCACCCCGGC...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTCCTAAGTCACCAATaGGGCCGGGGACTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGLLSHQ*GRGLQG
Trigger: CCCCTGGAGTCCCCGGCCTCATTGGTGACTTAGGAG...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCACCTCGGGCCGGAACTaGCCCCCAGCTTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: TLWPECSTGVHPRLESCPTSGRN*PPASKI
Trigger: GATTTTTGAAGCTGGGGGTCAGTTCCGGCCCGAGGT...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTAATGACTCCCGGGGGTaGAGGGCTCCCGGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: GQGHKASRAQVHLWSLACNDSRG*RAPGLR
Trigger: ACGAAGGCCGGGAGCCCTGCACCCCCGGGAGTCATT...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCAACTGCAGGCCCAGCTaGAGCTTGCGTTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSNCRPS*SLRFWL
Trigger: CAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTT...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp ATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGGCCCCCAGGGTCGAGTaGAGGGTCCCTGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: MLKVDRLTSWDKNQPGGLAPRVE*RVPVER
Trigger: CCTTTCCACAGGGACCCTGCACTCGACCCTGGGGGC...CAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCGTGCTGTTCTGGGAGTaGTGGTGCCCGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TLWPECSTGVHPRLESCPVLFWE*WCPKLE
Trigger: CTCCAACTTCGGGCACCAGCACTCCCAGAACAGCAC...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCTGGAGGACAGGAATTaGGCCGGGGCCAATACCAGG +
Preference number: 4 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMLEDRN*AGANTR
Trigger: CCTGGTATTGGCCCCGGCGCAATTCCTGTCCTCCAG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGACAGGTAACCCCTGCCTaGCAGGGTAACCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGQVTPA*QGNLWP
Trigger: GGGCCAAAGGTTACCCTGGCAGGCAGGGGTTACCTG...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGACCGGCATACCCATCTTaGCCCTCTTGCCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGPAYPS*PSCQER
Trigger: GCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGG...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCAGGAAACCCCTTCCTaGCAGGCTGACCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHQETPS*QADPPS
Trigger: GCTTGGAGGGTCAGCCTGGCAGGAAGGGGTTTCCTG...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCGCCCCGACGTCCCTTTaGTCCCCTCATGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPAPTSL*SPHAWW
Trigger: CCACCAGGCATGAGGGGAGCAAAGGGACGTCGGGGC...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCTTTCGGCCCTTCTCGCCTTaGTTCCCTGATTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DPLGPGTPGGPIMPRSPFRPFSP*FPDFPS
Trigger: TGAAGGAAAATCAGGGAAGCAAGGCGAGAAGGGCCG...AAAGGGTGATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTGCTTGCCCGTCCCTaGCAGGAAGCCCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGLLARP*QEAHLV
Trigger: GACCAGATGGGCTTCCTGGCAGGGACGGGCAAGCAG...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCCTCTGTTCCTCGCTTaGCAGGGGGACCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGPLFLA*QGDPAV
Trigger: GACAGCTGGGTCCCCCTGGCAAGCGAGGAACAGAGG...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCTGCCCAGTGCCCTCCTaGCACACGGTCATGTTAAGG +
Preference number: 4 (lower is better)
Translates to: TLWPECSTGVHPRLESCPCPVPS*HTVMLR
Trigger: CCTTAACATGACCGTGTGGCAGGAGGGCACTGGGCA...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCTGCTTGGCTGGGGTCTaGCCAGTGCCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPCLAGV*PVPSCH
Trigger: GTGGCAGGAGGGCACTGGGCAGACCCCAGCCAAGCA...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGACGATGATTGCATCTTaGAAGGACAGGCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRTMIAS*KDRLLE
Trigger: TTCCAGGAGCCTGTCCTTGCAAGATGCAATCATCGT...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTAGCTCGAGGGCCAGGTaGTGCCAGCGCCCGTCGTGC +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCSSRAR*CQRPSC
Trigger: GCACGACGGGCGCTGGCACCACCTGGCCCTCGAGCT...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGGTGGGGCTAGTCCTTTaGGGCTTGGTGGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: HMAKVIKQAEPRSTSGVWVGLVL*GLVGVA
Trigger: CGCCACGCCCACCAAGCCCCAAAGGACTAGCCCCAC...CCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGTACTGGCTGACAGCTTaGCAGGTAGCAGCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWYWLTA*QVAAGF
Trigger: AAACCCCGCTGCTACCTGCCAAGCTGTCAGCCAGTA...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp ATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGCCGGGTTCCTCTGGATaGGCTTCTCTGCGGGACGGG +
Preference number: 4 (lower is better)
Translates to: MLKVDRLTSWDKNQPGGLPGSSG*ASLRDG
Trigger: CCCGTCCCGCAGAGAAGCCCATCCAGAGGAACCCGG...CAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGTGGGCGGTGGGGGCCTaGGCATTCCCGGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLWAVGA*AFPGSS
Trigger: AGAGGAACCCGGGAATGCCCAGGCCCCCACCGCCCA...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCGCTTACTGGCATGGCTaGTTATCTTGGCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQAAYWHG*LSWPQS
Trigger: GGACTGAGGCCAAGATAACCAGCCATGCCAGTAAGC...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACAATGGGGGAGGTTTGTaGGTGCTGGTGCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHNGGGL*VLVRAE
Trigger: CTCTGCCCGCACCAGCACCCACAAACCTCCCCCATT...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCTTGGAGGTACCATCGTaGCTGGTGGCCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSLEVPS*LVAEYS
Trigger: GGAGTACTCGGCCACCAGCCACGATGGTACCTCCAA...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGCTGTTCTGGGAGTGCTaGTGCCCGAAGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWLFWEC*CPKLEV
Trigger: TACCTCCAACTTCGGGCACCAGCACTCCCAGAACAG...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGTCCGGGGGCTGCTCTTaGGTCCGGCTTTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMSGGCS*VRLSLR
Trigger: CCTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGA...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp ATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGATACCAGGGCCGGGGTaGTCTGCTGACTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MLKVDRLTSWDKNQPGGLIPGPG*SADWAG
Trigger: CCCAGCCCAGTCAGCAGACCACCCCGGCCCTGGTAT...CAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGATACCAGGGCCGGGGTaGTCTGCTGACTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVIPGPG*SADWAG
Trigger: CCCAGCCCAGTCAGCAGACCACCCCGGCCCTGGTAT...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCGCTGCCCTCAGGTCCTaGCTGCCCCTGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRAALRS*LPLFSG
Trigger: CCCGGAGAACAGGGGCAGCCAGGACCTGAGGGCAGC...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATCTCCCCTTGTCTCCTTaGAATCCGGGATCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHLPLSP*NPGSPD
Trigger: GTCAGGAGATCCCGGATTCCAAGGAGACAAGGGGAG...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGCCTCTCGAGCCCAAGTaGCCTCGCTCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWPLEPK*PRSPAT
Trigger: TGTGGCTGGTGAGCGAGGCCACTTGGGCTCGAGAGG...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCAGGGCCCGGTTCTCCTaGGAGGCCCTTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRRARFS*EALGAW
Trigger: CCAGGCACCAAGGGCCTCCCAGGAGAACCGGGCCCT...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCGACCCAGGCTCCCCCTaGTTTCCAGGGAGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPDPGSP*FPGSPV
Trigger: AACGGGGCTCCCTGGAAACCAGGGGGAGCCTGGGTC...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGTGGATGGTGATGTGCTaGGTCACCTCGGAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: DEARAATNTHFHAERPGWWMVMC*VTSELS
Trigger: GCTAAGCTCCGAGGTGACCCAGCACATCACCATCCA...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCTGCCCAAGGACCCTTaGGCAGGGGAGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPLPKDP*AGELPL
Trigger: GAGAGGCAGCTCCCCTGCCCAAGGGTCCTTGGGCAG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACTGGGCAGACAACAGCTaGGGTCTGCCCAAGGACCCT +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHWADNS*GLPKDP
Trigger: AGGGTCCTTGGGCAGACCCCAGCTGTTGTCTGCCCA...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCCACCCACTTCTACTaGGCAGACAACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSPTHFY*ADNSWG
Trigger: ACCCCAGCTGTTGTCTGCCCAGTAGAAGTGGGTGGG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CAA 72 bp AGGCGGTACTGCTTCCCTGATGAGGCAGGAGGGAGGTaGTCCACACTGATGATGGGCAGCTGTTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RRYCFPDEAGGR*STLMMGSCWGS
Trigger: AGACCCCCAACAGCTGCCCATCATCAGTGTGGACAACCTCCCTCCTGCCTCATCAGGGAAGCAGTACCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp CTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTATCTTCTGTGATGGTTaGGCGGCCGCAGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LKVDRLTSWDKNQPGGLCIFCDG*AAAGRG
Trigger: GCCTCGCCCTGCGGCCGCTCAACCATCACAGAAGAT...ACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGCACGTCTGTCCACCATaGGTGAAGTTGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPEHVCPP*VKLQET
Trigger: GGTCTCCTGCAACTTCACTCATGGTGGACAGACGTG...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAATCCGAGCGCTGAGATaGGGCCCGAGCTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGIRALR*GPSCYK
Trigger: TTTGTAGCAGCTCGGGCCTCATCTCAGCGCTCGGAT...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CAACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGATGCCAGCGCCCGTCGTaGATGTCGAGGTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QHHMAKVIKQAEPRSTSGCQRPS*MSRSKA
Trigger: GGCCTTCGACCTCGACATGCACGACGGGCGCTGGCA...TCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp ATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGCAGGCTTCCGGGGGCTaGTCTTGGGTCCGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: MLKVDRLTSWDKNQPGGLQASGG*SWVRLS
Trigger: AGAAAGCCGGACCCAAGAGCAGCCCCCGGAAGCCTG...CAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp AAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCCAAGATCGAATAGCCACTaGTCGTGGGCCGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KVDRLTSWDKNQPGGLCPRSNSH*SWAGGW
Trigger: CCAGCCCCCGGCCCACGAGCAGTGGCTATTCGATCT...TGGACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCGCCCAATGTAGCCCCTaGTGCCTTTGGGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPAQCSP*CLWGRD
Trigger: ATCCCGGCCCCAAAGGCAGCAGGGGCTACATTGGGC...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp CTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCCATCTTGCCCCTCTTaGCAGGAACGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LKVDRLTSWDKNQPGGLCPSCPS*QERQAG
Trigger: GCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGG...ACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGCTGGGGGTCCCATCATaGCACGATCACCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPELGVPS*HDHPFL
Trigger: GAGAAAAGGGTGATCGTGGCATGATGGGACCCCCAG...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCCCTGCTGTCCTGCTTaGCCGTCCCTGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRPCCPA*PSLPGS
Trigger: GCTTCCTGGCAGGGACGGGCAAGCAGGACAGCAGGG...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGTCCCCATCGTCTCCCTaGTCCCCCTGCTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVSPSSP*SPCCPA
Trigger: AGCAGGACAGCAGGGGGAGCAGGGAGACGATGGGGA...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGACTCTCTGGCCTGAGTaGTCCACTGGTGTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPETLWPE*STGVHP
Trigger: TGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp TTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCGTGCCCGTGGGAGCCTaGAGCCGGGCCCGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: FRVSPGKFQSHLNQLFLVVPVGA*SRARCV
Trigger: TACGCAGCGGGCCCGGCTCCAGGCTCCCACGGGCAC...GACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTTCCTTTGGGGCTTGGTaGGCGTGGCGGGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISSFGAW*AWRVPQ
Trigger: CTGTGGCACCCGCCACGCCCACCAAGCCCCAAAGGA...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCCAGAGGCCGGCTTACTaGCATGGCTGGTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: TLWPECSTGVHPRLESCPQRPAY*HGWLSW
Trigger: CCAAGATAACCAGCCATGCCAGTAAGCCGGCCTCTG...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCGGCAGGTGCTGTTCTaGGAGTGCTGGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LKVDRLTSWDKNQPGGLCRQVLF*ECWCPK
Trigger: CTTCGGGCACCAGCACTCCCAGAACAGCACCTGCCG...ACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCAGCCACAGTCTCCCTTaGGTCCCGGAGGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPSHSLP*VPEAPS
Trigger: TGATGGGGCCTCCGGGACCCAAGGGAGACTGTGGCT...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGAGGGCCGGGGAGACCTaGATTTCCATAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWRAGET*ISIRPR
Trigger: CCTGGGCCTTATGGAAATCCAGGTCTCCCCGGCCCT...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTTCGTCCCGGAGGTCCTaGATTCCCGGAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISSSRRS*IPGEPR
Trigger: CCTGGGCTCTCCGGGAATCCAGGACCTCCGGGACGA...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCTTCTCCCACGATTCCTaGCTCCCCGACCAGACCAAT +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSFSHDS*LPDQTN
Trigger: ATTGGTCTGGTCGGGGAGCCAGGAATCGTGGGAGAA...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGTTCTCCCACGATTCCTaGCTCCCCGACCAGACCAAT +
Preference number: 4 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPEFSHDS*LPDQTN
Trigger: ATTGGTCTGGTCGGGGAGCCAGGAATCGTGGGAGAA...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCGCCTTTCGATCCTTTaGGTCCCGGCCACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCRLSIL*VPATPG
Trigger: CCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCCAGAGTCGCCCGGCTaGCCTTTGGACCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCPESPG*PLDPGS
Trigger: GGAGCCTGGGTCCAAAGGCCAGCCGGGCGACTCTGG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCTCCCATCAAGCCAGGTaGCCCCCGAGGGCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRSHQAR*PPRALD
Trigger: ATCCAGGGCCCTCGGGGGCCACCTGGCTTGATGGGA...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAATGATGGGCAGCTGTTaGGGGTCTTGGGTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGMMGSC*GSWVRK
Trigger: CTTCCGGACCCAAGACCCCCAACAGCTGCCCATCAT...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp TTGGCATGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCCTGCCTGCTGGCAGTaGCCCCAGGGCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LACSYELCTGKAWYVEAAPACWQ*PQGWCG
Trigger: GCCACACCAGCCCTGGGGTCACTGCCAGCAGGCAGG...AGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACAAGGTGAAGAGTGTCTaGTGCCAGCGGCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHKVKSV*CQRPSW
Trigger: CCAAGATGGCCGCTGGCATCAGACACTCTTCACCTT...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCAAATCACATACACTGTaGGAGACAATTGTGAGCACC +
Preference number: 4 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPKSHTL*ETIVST
Trigger: GGTGCTCACAATTGTCTCTCACAGTGTATGTGATTT...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp GACCTCCTTACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGAGAGAAAGATGCGGATaGTGCCCCACATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: DLLTIDPLGPGTPGGPIMRERCG*CPTSKS
Trigger: ACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCT...CATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAGGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp TCACCTCCCTCCAGGACCGTGAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCGAGATGGTTCCATGTTaGTGCTTCACCTCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: SPPSRTVKGQANMLRTQAEMVPC*CFTSKP
Trigger: AGGCTTAGAGGTGAAGCATCAACATGGAACCATCTC...GGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTCACGGTCCTGGAGGGAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGTGGAGCCGGGCCCGCTaGGTAAAGATGAAGCCCGAC +
Preference number: 4 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLWSRAR*VKMKPD
Trigger: GTCGGGCTTCATCTTTACGCAGCGGGCCCGGCTCCA...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGAGGCTCAGCACCAGTaGCAGCTCTGTGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLEAQHQ*QLCAQG
Trigger: GCCTTGGGCACAGAGCTGGCACTGGTGCTGAGCCTC...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTGGCCCAGCTGCAGCTTaGGTTTCTGGCTGCGGACAG +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISGPAAA*VSGCGQ
Trigger: CTGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCC...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTTTGCCGGGGAGGAACTaGAGGCCCAGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISLPGRN*RPSCSL
Trigger: CAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAA...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACTCGAGGGCCAGGTGGTaGCAGCGCCCGTCGTGCATG +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNSRARW*QRPSCM
Trigger: CATGCACGACGGGCGCTGGCACCACCTGGCCCTCGA...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGATTCTGGGAGTGCTGGTaGCCGAAGTTGGAGGTACCA +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGFWECW*PKLEVP
Trigger: TGGTACCTCCAACTTCGGGCACCAGCACTCCCAGAA...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTCTGGAGGACAGGAATTaGGCCGGGGCCAATACCAGG +
Preference number: 4 (lower is better)
Translates to: GQGHKASRAQVHLWSLACLEDRN*AGANTR
Trigger: CCTGGTATTGGCCCCGGCGCAATTCCTGTCCTCCAG...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCAATGTAGCCCCTGCTaGCTTTGGGGCCGGGATCTC +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPQCSPC*LWGRDL
Trigger: GAGATCCCGGCCCCAAAGGCAGCAGGGGCTACATTG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp CTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCAATGTAGCCCCTGCTaGCTTTGGGGCCGGGATCTC +
Preference number: 4 (lower is better)
Translates to: LKVDRLTSWDKNQPGGLCQCSPC*LWGRDL
Trigger: GAGATCCCGGCCCCAAAGGCAGCAGGGGCTACATTG...ACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCGGGCTCCCCCACGCTaGCCATCAGTCCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCRAPPR*PSVPSC
Trigger: GCATGAAGGGACTGATGGGCAGCGTGGGGGAGCCCG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACTCCCTTTGGTCCCTCTaGGCCTTTCGATCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHSLWSL*AFRSFG
Trigger: CCCAAAGGATCGAAAGGCGCAGAGGGACCAAAGGGA...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGGGGTCCGAAGAGACCTaGCATTCCTGGGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWGSEET*HSWEAH
Trigger: ATGGGCTTCCCAGGAATGGCAGGTCTCTTCGGACCC...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACGGCCATCTTGGACCTTaGAGCCATCCATGGACACCT +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHGHLGP*SHPWTP
Trigger: AGGTGTCCATGGATGGCTGCAAGGTCCAAGATGGCC...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCGGGGCTCAGGCAGGTTaGAGGTCCAGCTTACTCTGG +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPGAQAG*RSSLLW
Trigger: CCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCC...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCTTCCCACGCCTGGCTaGTCCTTCCCATCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPLPTPG*SFPSSH
Trigger: GTGAGAGGATGGGAAGGAGCAGCCAGGCGTGGGAAG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTGCATGGTTCACCCGGTaGGAGCAGAGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISAWFTR*EQRLST
Trigger: GGTGCTGAGCCTCTGCTCCCACCGGGTGAACCATGC...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGATGGACGGGAAGTAGGTaGCACTTGCTTCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGWTGSR*HLLLSG
Trigger: CCCACTCAGAAGCAAGTGCCACCTACTTCCCGTCCA...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGAGGTACCATCGTGGCTaGTGGCCGAGTACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWRYHRG*WPSTPG
Trigger: ACCAGGAGTACTCGGCCACCAGCCACGATGGTACCT...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGAGCTGAGCCAGGAGTaGGGACGGCAGGTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLELSQE*GRQVLF
Trigger: GAACAGCACCTGCCGTCCCCACTCCTGGCTCAGCTC...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTCAGGCCGAAGAGCCCTaGGAGCCCAATGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISQAEEP*EPNVAP
Trigger: AGGGGCTACATTGGGCTCCCAGGGCTCTTCGGCCTG...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGGTCCCTTCATGCCCTTaGGTCCCGGGTAGCCAATCG +
Preference number: 4 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVVPSCP*VPGSQS
Trigger: CGATTGGCTACCCGGGACCCAAGGGCATGAAGGGAC...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCTTGTCTCCTTaGAATCCGGGATCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHLPLSP*NPGSPD
Trigger: GTCAGGAGATCCCGGATTCCAAGGAGACAAGGGGAG...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTTGGGCCTCGAGATCCTaGAGGACCCTGGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCWASRS*RTLGSR
Trigger: CCTGGACCCCAGGGTCCTCCAGGATCTCGAGGCCCA...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCCTCTCGAGCCCAAGTaGCCTCGCTCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRPLEPK*PRSPAT
Trigger: TGTGGCTGGTGAGCGAGGCCACTTGGGCTCGAGAGG...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGGAGACCTGCCATTCCTaGGAAGCCCATCTCGCCAGA +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWETCHS*EAHLAR
Trigger: TCTGGCGAGATGGGCTTCCCAGGAATGGCAGGTCTC...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGAAGATCTCTCCTCCCTaGTCCAGCACCAGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGKISPP*SSTSRS
Trigger: AGACCGGCTGGTGCTGGACCAGGGAGGAGAGATCTT...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTAGCGTACGGCCTGCTTaGCTGGGGTCTGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCSVRPA*LGSAQC
Trigger: GCACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCT...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGGGTCCCCATACCACCTaGCATTCCAGGATGACCTCC +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWGPHTT*HSRMTS
Trigger: GGAGGTCATCCTGGAATGCCAGGTGGTATGGGGACC...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGCGGCCTTCGTCCAGCTaGGGCCCAGCCGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMRPSSS*GPAAGG
Trigger: TCCTCCAGCGGCTGGGCCTCAGCTGGACGAAGGCCG...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCGAGGTCGAAGGCCACTaGGCGCCGGGACCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSEVEGH*APGPEV
Trigger: CACCTCGGGTCCCGGCGCTCAGTGGCCTTCGACCTC...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTGGGTCCGGCTTTCTTTaGGGCTTCCGATCCAATGGG +
Preference number: 4 (lower is better)
Translates to: GQGHKASRAQVHLWSLACGSGFL*GFRSNG
Trigger: CCCATTGGATCGGAAGCCTCAAAGAAAGCCGGACCC...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGCTCGCCTTGCTTCCCTaGTTTTCCTTCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVLALLP*FSFRTP
Trigger: CGGGGTCCTGAAGGAAAATCAGGGAAGCAAGGCGAG...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR TCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGTGTAACTCTCTGGCCTaGGTGCTCCACTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWCNSLA*VLHWCP
Trigger: TGGACACCAGTGGAGCACTCAGGCCAGAGAGTTACA...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACGGTGGACGACCGTCTTaGCGGGGAGGAACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNGGRPS*RGGTAG
Trigger: GCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACC...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCAGGCTTCCGGGGGCTaGTCTTGGGTCCGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCQASGG*SWVRLS
Trigger: AGAAAGCCGGACCCAAGAGCAGCCCCCGGAAGCCTG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGAATCCCATAAATCCCTaGTCTCCCACAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVNPINP*SPTGPG
Trigger: GCCGGGGCCTGTGGGAGAGCAGGGATTTATGGGATT...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTGCCCAATGAGGCCCTaGTCCCCAGGAGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARCPMRP*SPGVPR
Trigger: CCTGGGCACTCCTGGGGAGCAGGGCCTCATTGGGCA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCACCCTTGGCTCCAGTaGGGCCCTTCTCGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCHPWLQ*GPSRLA
Trigger: AGCAAGGCGAGAAGGGCCGCACTGGAGCCAAGGGTG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCTGGGGCCCCTGCCTTaGCTTGCTTTCCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRLGPLP*LAFPLV
Trigger: GACCAAAGGGAAAGCAAGGCAAGGCAGGGGCCCCAG...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGACCCAGGCCTCCCTGCTaGCTTAAAAGGACAGACATT +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGPRPPC*LKRTDI
Trigger: AATGTCTGTCCTTTTAAGGCAGCAGGGAGGCCTGGG...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCTGAGGCCCAGCCGCTaGAGGATGTCCACATCTTCA +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPLRPSR*RMSTSS
Trigger: TGAAGATGTGGACATCCTCCAGCGGCTGGGCCTCAG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTGCGAAGAGGAAGGCATaGTTCACCCGGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISAKRKA*FTRWEQ
Trigger: CTGCTCCCACCGGGTGAACCATGCCTTCCTCTTCGC...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTGAAGAGAGGTCCCAGTaGGGACTGGTACGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GQGHKASRAQVHLWSLACEERSQ*GLVRVS
Trigger: GCTGACACGTACCAGTCCCCACTGGGACCTCTCTTC...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp ATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGGGGCTGGTGTGGCAGTaGTCAAGTTCTCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: MLKVDRLTSWDKNQPGGLGLVWQ*SSSPGL
Trigger: TAGGCCTGGAGAACTTGACCACTGCCACACCAGCCC...CAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGGGGCTTGGTGGGCGTaGCGGGTGCCACAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSGAWWA*RVPQSP
Trigger: GGGGGACTGTGGCACCCGCCACGCCCACCAAGCCCC...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCGCCGCCAACAGAGGCTaGGAGCATGGGATCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRAANRG*EHGIKC
Trigger: GCACTTGATCCCATGCTCCCAGCCTCTGTTGGCGGC...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCATTCCCGGGTTCCTCTaGATGGGCTTCTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPIPGFL*MGFSAG
Trigger: TCCCGCAGAGAAGCCCATCCAGAGGAACCCGGGAAT...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACGAGGTTTGTGGGTGCTaGTGCGGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNEVCGC*CGQRPA
Trigger: AGCCGGCCTCTGCCCGCACCAGCACCCACAAACCTC...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCAGCCACAGTCTCCCTTaGGTCCCGGAGGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: PHIFRVSPGKFQSHLNQLSHSLP*VPEAPS
Trigger: TGATGGGGCCTCCGGGACCCAAGGGAGACTGTGGCT...GAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTCGTCCCGGAGGTCCTaGATTCCCGGAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARSSRRS*IPGEPR
Trigger: CCTGGGCTCTCCGGGAATCCAGGACCTCCGGGACGA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTGTAACCTTTGGCCCCTaGGCTGCCCTCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCVTFGP*AALRSW
Trigger: CCAGGACCTGAGGGCAGCCCAGGGGCCAAAGGTTAC...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CAACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGATTCTCCATCAGACCCTaGCAGGCCGAAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QHHMAKVIKQAEPRSTSGFSIRP*QAEEPW
Trigger: CCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAA...TCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCCCCCTGGCGGCCCCATaGGTCCCTCATCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSPLAAP*VPHLPR
Trigger: CCGAGGGAGATGAGGGACCCATGGGGCCGCCAGGGG...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCGGCCCGGTCTGCCCTaGGGTCCTGGAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSRPGLP*GPGGPF
Trigger: GAAGGGCCCTCCAGGACCCCAGGGCAGACCGGGCCG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCCCATCAGCCCTTCCTaGCCTTTCTCGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGPISPS*PFSPCS
Trigger: AGAACATGGCGAGAAAGGCCAGGAAGGGCTGATGGG...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCGTCCTTGATAGCCCTTaGCACCCTTGGCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPVLDSP*HPWLQC
Trigger: GCACTGGAGCCAAGGGTGCCAAGGGCTATCAAGGAC...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGGGAGCAGCCAAGGTTTaGATCCACCCAGTAGGTACC +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWGAAKV*IHPVGT
Trigger: GGTACCTACTGGGTGGATCCAAACCTTGGCTGCTCC...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGATGATGGGCAGCTGTTaGGGGTCTTGGGTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVMMGSC*GSWVRK
Trigger: CTTCCGGACCCAAGACCCCCAACAGCTGCCCATCAT...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCCCACCCACTTCTACTaGGCAGACAACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPPTHFY*ADNSWG
Trigger: ACCCCAGCTGTTGTCTGCCCAGTAGAAGTGGGTGGG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGAGAAACGGAACCCATTaGGGTTTTAATACACTGACA +
Preference number: 4 (lower is better)
Translates to: GPSCYKHALPRRASRLGRRNGTH*GFNTLT
Trigger: TGTCAGTGTATTAAAACCCCAATGGGTTCCGTTTCT...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCAAGAATCAGCCAGGTaGGCTGTGTCCAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: LKVDRLTSWDKNQPGGLCQESAR*AVSRGS
Trigger: GGATCCCCTGGACACAGCCCACCTGGCTGATTCTTG...ACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGACTGGTTGCAGAGGGTaGCAGAGGAGTGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHGQGHKASRAQVHLWSLTGCRG*QRSVAG
Trigger: CCCTGCCACACTCCTCTGCCACCCTCTGCAACCAGT...CAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp ACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTACCGCCATATGCTGGTaGGGGTTTGTGGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: TSHGQGHKASRAQVHLWSTAICW*GFVGLV
Trigger: GACTAGCCCCACAAACCCTCACCAGCATATGGCGGT...ACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp CCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCGGCTGTGATCTTCTGTaGTGGTTGAGCGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PHIFRVSPGKFQSHLNQLGCDLL*WLSGRR
Trigger: CCTGCGGCCGCTCAACCATCACAGAAGATCACAGCC...GAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGCCGGGGTGGTCTGCTaGCTGGGCTGGGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVAGVVC*LGWGCL
Trigger: CAGACAGCCCCAGCCCAGTCAGCAGACCACCCCGGC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCAGAGAAAGATGCGGATaGTGCCCCACATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSRERCG*CPTSKS
Trigger: ACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCT...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTTCTCCGGGGTGCCCTaGCGGTCCAGGATAGCCCTT +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARFSGVP*RSRIAL
Trigger: AAGGGCTATCCTGGACCGGCAGGGCACCCCGGAGAA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATCCAAGATCATCTTGTTaGAATTGGATAGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHPRSSC*NWIGPP
Trigger: AGGGGGTCCTATCCAATTGCAACAAGATGATCTTGG...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTGCGTGTCCAACTGGTTaGAGAGGGTGGCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISACPTG*RGWQRS
Trigger: ACTCCTCTGCCACCCTCTGCAACCAGTTGGACACGC...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGAAGATGAAGCCCGACTaGAAAGGAATGACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGKMKPD*KGMTPG
Trigger: CCCGGGAGTCATTCCTTTCCAGTCGGGCTTCATCTT...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTAGGGCGAGGTCGGACTaGAAGGTAAAAGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LKVDRLTSWDKNQPGGLCRARSD*KVKGLP
Trigger: TGGCAGACCTTTTACCTTCCAGTCCGACCTCGCCCT...ACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCAGCGGGGTTTGGGCTaGGCCTCCCACCGCCATATG +
Preference number: 4 (lower is better)
Translates to: CSYELCTGKAWYVEAAQTQRGLG*ASHRHM
Trigger: CATATGGCGGTGGGAGGCCCAGCCCAAACCCCGCTG...CGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGACTCTGGCAGGAACTaGACGGGAAGTAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLDSGRN*TGSRWH
Trigger: GTGCCACCTACTTCCCGTCCAGTTCCTGCCAGAGTC...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCATTCCCGGGTTCCTCTaGATGGGCTTCTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRIPGFL*MGFSAG
Trigger: TCCCGCAGAGAAGCCCATCCAGAGGAACCCGGGAAT...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGATTCCCGGGTTCCTCTaGATGGGCTTCTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: SHGQGHKASRAQVHLWSLIPGFL*MGFSAG
Trigger: TCCCGCAGAGAAGCCCATCCAGAGGAACCCGGGAAT...CAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTGGGCGGTGGGGGCCTaGGCATTCCCGGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSWAVGA*AFPGSS
Trigger: AGAGGAACCCGGGAATGCCCAGGCCCCCACCGCCCA...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGGCTTACTGGCATGGCTaGTTATCTTGGCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGAYWHG*LSWPQS
Trigger: GGACTGAGGCCAAGATAACCAGCCATGCCAGTAAGC...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCAATGGGGGAGGTTTGTaGGTGCTGGTGCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PHIFRVSPGKFQSHLNQLNGGGL*VLVRAE
Trigger: CTCTGCCCGCACCAGCACCCACAAACCTCCCCCATT...GAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCCATACCATCGTGGCTGGTaGCCGAGTACTCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KVDRLTSWDKNQPGGLCPYHRGW*PSTPGR
Trigger: TCTACCAGGAGTACTCGGCCACCAGCCACGATGGTA...TGGACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGTTGCAGAAGGTACCATCGTGGCTaGTGGCCGAGTACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GQSLVCRSCSNACPTGCRRYHRG*WPSTPG
Trigger: ACCAGGAGTACTCGGCCACCAGCCACGATGGTACCT...TCTGCAACCAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTTTGGAGGTACCATCGTaGCTGGTGGCCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISLEVPS*LVAEYS
Trigger: GGAGTACTCGGCCACCAGCCACGATGGTACCTCCAA...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCGCCTTGCTTTCCCTTTaGTCCCTCTGCGCCTTTCGA +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPALLSL*SLCAFR
Trigger: TCGAAAGGCGCAGAGGGACCAAAGGGAAAGCAAGGC...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCTCATCTTGTTGCAATTaGATAGGACCCCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLWPECSTGVHPRLESCPSSCCN*IGPPGG
Trigger: TCCTCCAGGGGGTCCTATCCAATTGCAACAAGATGA...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACATAGCTGTAACTCTCTaGCCTGAGTGCTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHIAVTL*PECSTG
Trigger: ACCAGTGGAGCACTCAGGCCAGAGAGTTACAGCTAT...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCGGAGCAGCCAAGGTTTaGATCCACCCAGTAGGTACC +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPGAAKV*IHPVGT
Trigger: GGTACCTACTGGGTGGATCCAAACCTTGGCTGCTCC...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGTGCAGGAGACCTCGATaGTGTCAGAGGAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVCRRPR*CQRSSQ
Trigger: TTGGCTGCTCCTCTGACACCATCGAGGTCTCCTGCA...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGTGCAGGAAATTCATCTaGACCCGGCTGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMCRKFI*TRLMAN
Trigger: GTTTGCCATCAGCCGGGTCCAGATGAATTTCCTGCA...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp ATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGAAACGCGTGTCCAACTaGTTGCAGAGGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: MLKVDRLTSWDKNQPGGLKRVSN*LQRVAE
Trigger: CTCTGCCACCCTCTGCAACCAGTTGGACACGCGTTT...CAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR CAA 72 bp GGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTaGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GCRSSLLWLALW*VFGAKLGSIVP
Trigger: GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTTGGGTGGAGGCCAGGTaGCAGGCAAACGAGACTAAG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCWVEAR*QANETK
Trigger: CTTAGTCTCGTTTGCCTGTCACCTGGCCTCCACCCA...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGCCGACTGGAAAGGAATaGCTCCCGGGGGTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMPTGKE*LPGVQG
Trigger: GCCCTGCACCCCCGGGAGTCATTCCTTTCCAGTCGG...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp TCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGGTGGCACTTGCTTCTaGGTGGGTAGGGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: SHGQGHKASRAQVHLWSLGGTCF*VGRADF
Trigger: AAAGTCAGCCCTACCCACTCAGAAGCAAGTGCCACC...CAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTGAATCCGGGATCTCCTaGCACACCTGGAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCESGIS*HTWNPL
Trigger: CAAGGGGTTCCAGGTGTGTCAGGAGATCCCGGATTC...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCTCCCCGTTGCCCAATaGGGCCCTGCTCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVLPVAQ*GPAPQE
Trigger: CTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTTCATCTGGACCCGGCTaGTGGCAAACTCGACCTTGG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCSSGPG*WQTRPW
Trigger: CCAAGGTCGAGTTTGCCATCAGCCGGGTCCAGATGA...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCGCCGACTTGTTCGCTaGTGTAGCACAATTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPRRLVR*CSTIQR
Trigger: CCTCTGAATTGTGCTACATCAGCGAACAAGTCGGCG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACGCCTCGGTCCTTTTCTaGTTCCACCAAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHASVLF*FHQKGR
Trigger: TCTTCCTTTTTGGTGGAAGCAGAAAAGGACCGAGGC...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGTCGAGGGCCAGGTGGTaGCAGCGCCCGTCGTGCATG +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLSRARW*QRPSCM
Trigger: CATGCACGACGGGCGCTGGCACCACCTGGCCCTCGA...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGTCAGCCTGTCCACACTaGTTCCTCAGGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: SHGQGHKASRAQVHLWSLSACPH*FLRWVQ
Trigger: CTGTACCCACCTGAGGAAGCAGTGTGGACAGGCTGA...CAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCTGGATGGGCTTCTCTaGGGGACGGGAGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: CSYELCTGKAWYVEAAQTLDGLL*GTGDSG
Trigger: GCCAGAGTCTCCCGTCCCGCAGAGAAGCCCATCCAG...CGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCGTTTGTGGGTGCTGGTaGGGGCAGAGGCCGGCTTAC +
Preference number: 4 (lower is better)
Translates to: FRVSPGKFQSHLNQLFLVVCGCW*GQRPAY
Trigger: GTAAGCCGGCCTCTGCCCGCACCAGCACCCACAAAC...GACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp ACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTCTGGGAGTGCTGGTaGCCGAAGTTGGAGGTACCA +
Preference number: 4 (lower is better)
Translates to: TSHGQGHKASRAQVHLWSFWECW*PKLEVP
Trigger: TGGTACCTCCAACTTCGGGCACCAGCACTCCCAGAA...ACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp CCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCGTGCTGTTCTGGGAGTaGTGGTGCCCGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PHIFRVSPGKFQSHLNQLVLFWE*WCPKLE
Trigger: CTCCAACTTCGGGCACCAGCACTCCCAGAACAGCAC...GAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTGGAGGACAGGAATTaGGCCGGGGCCAATACCAGG +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARLEDRN*AGANTR
Trigger: CCTGGTATTGGCCCCGGCGCAATTCCTGTCCTCCAG...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCAAGGGGTCCCACAATaGCTTTGTGTCCATCATAAC +
Preference number: 4 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMQGVPQ*LCVHHN
Trigger: GTTATGATGGACACAAAGGCATTGTGGGACCCCTTG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR GCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCTCCCCCTGCTGTCCTaGTTGCCCGTCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVLPLLS*LPVPAR
Trigger: CCTGGCAGGGACGGGCAAGCAGGACAGCAGGGGGAG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCCACGTCTGGAAAGCTaGCCCAAGATCATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGPRLES*PKIILL
Trigger: CAACAAGATGATCTTGGGGCAGCTTTCCAGACGTGG...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCACTTCCAGGCGGTACTaGTTCCCTGATGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRTSRRY*FPDEAG
Trigger: TCCTGCCTCATCAGGGAAGCAGTACCGCCTGGAAGT...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCGTGGGGCTAGTCCTTTaGGGCTTGGTGGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSVGLVL*GLVGVA
Trigger: CGCCACGCCCACCAAGCCCCAAAGGACTAGCCCCAC...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp ACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTACTGGCTGACAGCTTaGCAGGTAGCAGCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TSHGQGHKASRAQVHLWSYWLTA*QVAAGF
Trigger: AAACCCCGCTGCTACCTGCCAAGCTGTCAGCCAGTA...ACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACGCCGCCAACAGAGGCTaGGAGCATGGGATCAAGTGC +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNAANRG*EHGIKC
Trigger: GCACTTGATCCCATGCTCCCAGCCTCTGTTGGCGGC...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGTGGACGGGAAGTAGGTaGCACTTGCTTCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLWTGSR*HLLLSG
Trigger: CCCACTCAGAAGCAAGTGCCACCTACTTCCCGTCCA...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGGAGGTTTGTGGGTGCTaGTGCGGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMEVCGC*CGQRPA
Trigger: AGCCGGCCTCTGCCCGCACCAGCACCCACAAACCTC...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AAACCAGCTCTTCTTGGTCATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAATCCGGGGGCTGCTCTTaGGTCCGGCTTTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: KPALLGHAEGRSSHLLGQSGGCS*VRLSLR
Trigger: CCTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGA...TTGTCCCAGGAGGTGAGACGATCTACCTTCAGCATGACCAAGAAGAGCTGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACAGGGCCGGGGAGACCTaGATTTCCATAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNRAGET*ISIRPR
Trigger: CCTGGGCCTTATGGAAATCCAGGTCTCCCCGGCCCT...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCGGGGCCGATGTCTCCTaGGAATCCCTCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSGADVS*ESLGSR
Trigger: CCTGGACCCGAGGGATTCCCAGGAGACATCGGCCCC...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGGGGTCCAGGCACGCCTaGGGGTCCCATCATGCCACG +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLGSRHA*GSHHAT
Trigger: CGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCC...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGACCCATCGACCCCTTaGGTCCAGGCACGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVDPSTP*VQARLG
Trigger: CCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGGTC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCGATCCTGGAGGACCCTaGGGTCCAGGCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSDPGGP*GPGSPG
Trigger: CCCTGGAGAGCCTGGACCCCAGGGTCCTCCAGGATC...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGTCCTGGAGGCCCAATTaGCCCCTGGGGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMSWRPN*PLGSLR
Trigger: CCTCAGGGACCCCAGGGGCCAATTGGGCCTCCAGGA...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCCGGGTTGGCCCTGCTaGCCTGGCTTTCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSPGWPC*PGFPRR
Trigger: CCTCCGTGGAAAGCCAGGCCAGCAGGGCCAACCCGG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCGCCTTTCGATCCTTTaGGTCCCGGCCACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSRLSIL*VPATPG
Trigger: CCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCGACCCAGGCTCCCCCTaGTTTCCAGGGAGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSDPGSP*FPGSPV
Trigger: AACGGGGCTCCCTGGAAACCAGGGGGAGCCTGGGTC...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGCTCCAGGCGGGCCCTTaGGTCCGAAGAGACCTGCCA +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMLQAGP*VRRDLP
Trigger: TGGCAGGTCTCTTCGGACCCAAGGGCCCGCCTGGAG...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGGTCATGTTAAGGCAGTaGATGGTGATGTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGVMLRQ*MVMCWV
Trigger: GACCCAGCACATCACCATCCACTGCCTTAACATGAC...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGTCTTTGGGGCTAAGCTaGGATCCATTGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWSLGLS*DPLFPR
Trigger: CCTTGGGAACAATGGATCCCAGCTTAGCCCCAAAGA...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACTGCGGCTTCCTGAGATaGTTCCATGTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHCGFLR*FHVDAS
Trigger: TGAAGCATCAACATGGAACCATCTCAGGAAGCCGCA...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCAGCCCATGTCACCTTTaGCTCCAGGAGGGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: FRVSPGKFQSHLNQLFLVSPCHL*LQEGRG
Trigger: TCCCCGGCCCTCCTGGAGCCAAAGGTGACATGGGCT...GACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACAAAGAGAGAGAGAGATaGTCAAACTTTTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHKERER*SNFWRR
Trigger: CCGCCTCCAAAAGTTTGATCATCTCTCTCTCTCTTT...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTTCACAGGGTAGATACTaGACTGGCAGAGAGCACCTT +
Preference number: 4 (lower is better)
Translates to: GQGHKASRAQVHLWSLACSQGRY*TGREHL
Trigger: AAGGTGCTCTCTGCCAGTTCAGTATCTACCCTGTGA...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCTTTGATGGGCACAATTaGAGTAGAAGGGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPFDGHN*SRRGRR
Trigger: CCTTCGGCCCCTTCTACTTCAATTGTGCCCATCAAA...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCTCTGTCCACCATGAGTaGAGTTGCAGGAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRSVHHE*SCRRPR
Trigger: TCGAGGTCTCCTGCAACTTCACTCATGGTGGACAGA...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAGGGGTTTTAATACACTaGCATGTGGACAGAGACGTA +
Preference number: 4 (lower is better)
Translates to: EGPSQHASHPGLPAALKGGVLIH*HVDRDV
Trigger: TACGTCTCTGTCCACATGTCAGTGTATTAAAACCCC...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp ACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGTGGGGGCATATCTaGCCTTACCCAAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSHGQGHKASRAQVHLWSLWGHI*PYPSFL
Trigger: GAGGAAGCTTGGGTAAGGTCAGATATGCCCCCACAA...ACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp AAACCAGCTCTTCTTGGTCATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAAACTGCAGGCCCAGCTaGAGCTTGCGTTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KPALLGHAEGRSSHLLGQNCRPS*SLRFWL
Trigger: CAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTT...TTGTCCCAGGAGGTGAGACGATCTACCTTCAGCATGACCAAGAAGAGCTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGTGCCAGCGCCCGTCGTaGATGTCGAGGTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLCQRPS*MSRSKA
Trigger: GGCCTTCGACCTCGACATGCACGACGGGCGCTGGCA...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGACCTTCAAACTGGACTaGATGCGGGTTCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: HMAKVIKQAEPRSTSGVWTFKLD*MRVHLP
Trigger: GGGAAGATGAACCCGCATGCAGTCCAGTTTGAAGGT...CCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGGAAAGGCGTAGATCCTaGCAGGTGGAAGATCGAATA +
Preference number: 4 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGERRRS*QVEDRI
Trigger: TATTCGATCTTCCACCTGGCAGGATCTACGCCTTTC...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp TTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCCCGGCATACCCATCTTaGCCCTCTTGCCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: FRVSPGKFQSHLNQLFLVPAYPS*PSCQER
Trigger: GCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGG...GACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTTGCCGTCCTCGCCCTaGTCCCCCTTTTCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARLPSSP*SPFSPF
Trigger: AAAAGGCGAAAAGGGGGAGCAGGGCGAGGACGGCAA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCCATCTGGTCCAGCGATaGCCTCGAGGCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSHLVQR*PRGPVS
Trigger: GGAGACAGGGCCTCGAGGGCATCGCTGGACCAGATG...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGCTGCTTGCCCGTCCCTaGCAGGAAGCCCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMLLARP*QEAHLV
Trigger: GACCAGATGGGCTTCCTGGCAGGGACGGGCAAGCAG...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGCCTCTGTTCCTCGCTTaGCAGGGGGACCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMPLFLA*QGDPAV
Trigger: GACAGCTGGGTCCCCCTGGCAAGCGAGGAACAGAGG...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTACTCTCTGGCCTGAGTaGTCCACTGGTGTCCATCCA +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCTLWPE*STGVHP
Trigger: TGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTAGCTGGGATTACAGATaGACACCACTACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LKVDRLTSWDKNQPGGLCSWDYR*TPLHLA
Trigger: AGCCAGGTGTAGTGGTGTGCATCTGTAATCCCAGCT...ACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp CACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGGTGATAACTGCTCACTaGAACCTCTGCCTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: HMAKVIKQAEPRSTSGVWVITAH*NLCLLV
Trigger: CACTAGGAGGCAGAGGTTGCAGTGAGCAGTTATCAC...CCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGGGTCCCAGTGGGGACTaGTACGTGTCAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSYELCTGKAWYVEAAQTGPSGD*YVSACP
Trigger: TGGACAGGCTGACACGTACCAGTCCCCACTGGGACC...CGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCGATCAAGTGCGTTACTaGCTGACAGCTTGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPDQVRY*LTAWQV
Trigger: TACCTGCCAAGCTGTCAGCCAGTAACGCACTTGATC...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTCCAGATCAAGTGCGTTACTaGCTGACAGCTTGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KVDRLTSWDKNQPGGLCPDQVRY*LTAWQV
Trigger: TACCTGCCAAGCTGTCAGCCAGTAACGCACTTGATC...TGGACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCCGGGTTCCTCTGGATaGGCTTCTCTGCGGGACGGG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSPGSSG*ASLRDG
Trigger: CCCGTCCCGCAGAGAAGCCCATCCAGAGGAACCCGG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CAACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGACATGGCTGGTTATCTTaGCCTCAGTCCGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: QHHMAKVIKQAEPRSTSGHGWLS*PQSELV
Trigger: CACTAGCTCGGACTGAGGCCAAGATAACCAGCCATG...TCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp ACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTGCTTACTGGCATGGCTaGTTATCTTGGCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: TSHGQGHKASRAQVHLWSAYWHG*LSWPQS
Trigger: GGACTGAGGCCAAGATAACCAGCCATGCCAGTAAGC...ACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGGCTGGTGCCCGAAGTTaGAGGTACCATCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSYELCTGKAWYVEAAQTAGARS*RYHRGW
Trigger: CCAGCCACGATGGTACCTCCAACTTCGGGCACCAGC...CGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AAACCAGCTCTTCTTGGTCATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGCTTCTTGCTTCCAGTaGGAGCTGAGCCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KPALLGHAEGRSSHLLGQASCFQ*ELSQEW
Trigger: CCACTCCTGGCTCAGCTCCCACTGGAAGCAAGAAGC...TTGTCCCAGGAGGTGAGACGATCTACCTTCAGCATGACCAAGAAGAGCTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCAGCCACAGTCTCCCTTaGGTCCCGGAGGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSSHSLP*VPEAPS
Trigger: TGATGGGGCCTCCGGGACCCAAGGGAGACTGTGGCT...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCCCCCTGGCGGCCCCATaGGTCCCTCATCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFPLAAP*VPHLPR
Trigger: CCGAGGGAGATGAGGGACCCATGGGGCCGCCAGGGG...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGGGCCCCCGAGGGCCCTaGATGCCTTTGAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMGPRGP*MPLKPM
Trigger: CATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCC...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTGCCAGCGGCCATCTTaGACCTTGCAGCCATCCATG +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARCQRPS*TLQPSM
Trigger: CATGGATGGCTGCAAGGTCCAAGATGGCCGCTGGCA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
3UTR CAA 72 bp CATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTaGGCATGTTCATATGAGCTATGCACGGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HKASRAQVHLWS*ACSYELCTGKA
Trigger: GGCTTTGCCCGTGCATAGCTCATATGAACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGGGCCCTGGATGCCTTTaGAGCCAATGTCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMGPGCL*SQCLQA
Trigger: CGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCC...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCACGTCTGTCCACCATaGGTGAAGTTGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARHVCPP*VKLQET
Trigger: GGTCTCCTGCAACTTCACTCATGGTGGACAGACGTG...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACAAATCACATACACTGTaGGAGACAATTGTGAGCACC +
Preference number: 4 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHKSHTL*ETIVST
Trigger: GGTGCTCACAATTGTCTCTCACAGTGTATGTGATTT...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp CACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGTTTGGCATGTTCATATaGGCTATGCACGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: HMAKVIKQAEPRSTSGVWFGMFI*AMHGQS
Trigger: GCTTTGCCCGTGCATAGCTCATATGAACATGCCAAA...CCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGGCTTGCGTTTCTGGCTaGGGACAGCGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSYELCTGKAWYVEAAQTACVSG*GQRRGR
Trigger: CCTTCCTCTTCGCTGTCCGCAGCCAGAAACGCAAGC...CGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCACCTTCAAACTGGACTaGATGCGGGTTCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRTFKLD*MRVHLP
Trigger: GGGAAGATGAACCCGCATGCAGTCCAGTTTGAAGGT...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGGAAAGGCGTAGATCCTaGCAGGTGGAAGATCGAATA +
Preference number: 4 (lower is better)
Translates to: HMAKVIKQAEPRSTSGVWERRRS*QVEDRI
Trigger: TATTCGATCTTCCACCTGGCAGGATCTACGCCTTTC...CCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGTTCTCCGGGGTGCCCTaGCGGTCCAGGATAGCCCTT +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVFSGVP*RSRIAL
Trigger: AAGGGCTATCCTGGACCGGCAGGGCACCCCGGAGAA...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCATGCTGAAGGTAGATGCCCAATGTAGCCCCTaGTGCCTTTGGGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: GKFQSHLNQLFLVMLKVDAQCSP*CLWGRD
Trigger: ATCCCGGCCCCAAAGGCAGCAGGGGCTACATTGGGC...ATCTACCTTCAGCATGACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGCCATCTTGCCCCTCTTaGCAGGAACGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLPSCPS*QERQAG
Trigger: GCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGG...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCCATCTTGCCCCTCTTaGCAGGAACGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSPSCPS*QERQAG
Trigger: GCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCATCTGGTCCAGCGATaGCCTCGAGGCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSHLVQR*PRGPVS
Trigger: GGAGACAGGGCCTCGAGGGCATCGCTGGACCAGATG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCAGGGAGCCCCGTTCTaGCCTCTGTTCCTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVQGAPF*PLFLAC
Trigger: GCAAGCGAGGAACAGAGGGCAGAACGGGGCTCCCTG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCAGTGGATGGTGATGTaGTGGGTCACCTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARQWMVM*WVTSEL
Trigger: AAGCTCCGAGGTGACCCAGCACATCACCATCCACTG...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGTCTCCTGGAGCCATCTaGCCCTCAGTACCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMSPGAI*PSVPSP
Trigger: AGGGGAGGGTACTGAGGGGCAGATGGCTCCAGGAGA...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TTGGCATGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTGCTCACTGCAACCTCTaGCTCCTAGTGATCCTGCCG +
Preference number: 4 (lower is better)
Translates to: LACSYELCTGKAWYVEAAAHCNL*LLVILP
Trigger: CGGCAGGATCACTAGGAGGCAGAGGTTGCAGTGAGC...AGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp TCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGCAGTGGTGTGATAACTaGTCACTGCAACCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SHGQGHKASRAQVHLWSLQWCDN*SLQPLP
Trigger: AGGCAGAGGTTGCAGTGAGCAGTTATCACACCACTG...CAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGCATGGTTCACCCGGTaGGAGCAGAGGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVAWFTR*EQRLST
Trigger: GGTGCTGAGCCTCTGCTCCCACCGGGTGAACCATGC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCTGCAGCTTGCGTTTCTaGCTGCGGACAGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FRVSPGKFQSHLNQLFLVCSLRF*LRTAKR
Trigger: CCTCTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCA...GACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGTTGCAGAAGAGCACCTTCAAACTaGACTGCATGCGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: GQSLVCRSCSNACPTGCRRAPSN*TACGFI
Trigger: GATGAACCCGCATGCAGTCCAGTTTGAAGGTGCTCT...TCTGCAACCAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGAGGCTGGGAGCATaGGATCAAGTGCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNQRLGA*DQVRYW
Trigger: CCAGTAACGCACTTGATCCCATGCTCCCAGCCTCTG...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCATGGCTGGTTATCTTaGCCTCAGTCCGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCHGWLS*PQSELV
Trigger: CACTAGCTCGGACTGAGGCCAAGATAACCAGCCATG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTACCATCGTGGCTGGTaGCCGAGTACTCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARYHRGW*PSTPGR
Trigger: TCTACCAGGAGTACTCGGCCACCAGCCACGATGGTA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCTGTTCTGGGAGTGCTaGTGCCCGAAGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNLFWEC*CPKLEV
Trigger: TACCTCCAACTTCGGGCACCAGCACTCCCAGAACAG...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCGGCAGGTGCTGTTCTaGGAGTGCTGGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVRQVLF*ECWCPK
Trigger: CTTCGGGCACCAGCACTCCCAGAACAGCACCTGCCG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCAGGCCGAAGAGCCCTaGGAGCCCAATGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVQAEEP*EPNVAP
Trigger: AGGGGCTACATTGGGCTCCCAGGGCTCTTCGGCCTG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCACCCTTCATGCCTTCTaGGCCATTGTCGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSTLHAF*AIVARG
Trigger: CCCCCTGGCGACAATGGCCCAGAAGGCATGAAGGGT...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGGTCACCCTCAAGGCCTaGCTCTCCCCGTTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMVTLKA*LSPLPN
Trigger: ATTGGGCAACGGGGAGAGCCAGGCCTTGAGGGTGAC...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGCCAGGAAGCCCATCTaGTCCAGCGATGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVARKPI*SSDALE
Trigger: CTCGAGGGCATCGCTGGACCAGATGGGCTTCCTGGC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCTCCCAGCAGGGCCCATaGGGCCAGGGTCCCCATCGT +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFSQQGP*GQGPHR
Trigger: ACGATGGGGACCCTGGCCCCATGGGCCCTGCTGGGA...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGGCCCCCGAGGGCCCTaGATGCCTTTGAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVGPRGP*MPLKPM
Trigger: CATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCTCTTTGGGGCTAAGCTaGGATCCATTGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRSLGLS*DPLFPR
Trigger: CCTTGGGAACAATGGATCCCAGCTTAGCCCCAAAGA...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCATTTTCTTCAAAGTCTGTaGCAAAATAATGGTAGCACC +
Preference number: 4 (lower is better)
Translates to: ESRRSQDSEGPDDAFLSHFLQSL*QNNGST
Trigger: GGTGCTACCATTATTTTGCCACAGACTTTGAAGAAA...ATGGGAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGGAGGCCAGTGGATTCTaGCAGCAGGAGGGATCCGAG +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMEASGF*QQEGSE
Trigger: CTCGGATCCCTCCTGCTGCCAGAATCCACTGGCCTC...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCGATCGTCTCACCTCCTaGGACAAGAATCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PHIFRVSPGKFQSHLNQLDRLTS*DKNQPG
Trigger: ACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATC...GAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTACCCACTCTCACCCTTaGATCCTGGGGGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSTHSHP*ILGVPV
Trigger: CACAGGGACCCCCAGGATTCAAGGGTGAGAGTGGGT...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCACCTCGGGCCGGAACTaGCCCCCAGCTTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSTSGRN*PPASKI
Trigger: GATTTTTGAAGCTGGGGGTCAGTTCCGGCCCGAGGT...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCAATTCAGAGGACGCTaGACGTCACTATGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCQFRGR*TSLWCR
Trigger: TCGACACCATAGTGACGTTCAGCGTCCTCTGAATTG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCGAGGGATCCGAGCGCTaGGATGAGGCCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFEGSER*DEARAA
Trigger: AGCAGCTCGGGCCTCATCTCAGCGCTCGGATCCCTC...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCGAAAGGCGTAGATCCTaGCAGGTGGAAGATCGAATA +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRERRRS*QVEDRI
Trigger: TATTCGATCTTCCACCTGGCAGGATCTACGCCTTTC...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTTTTCCACGGAGGCCTTaGACACCCTCCTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSFPRRP*TPSCPG
Trigger: CCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAA...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTTCGGAGCTTAGCAGGTaGAGGAAATTCATCTGGACC +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCSELSR*RKFIWT
Trigger: GGTCCAGATGAATTTCCTGCACCTGCTAAGCTCCGA...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCCTGGGGTCTGCCCAGTaGCCTCCTGCCACACGGTCA +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFLGSAQ*PPATRS
Trigger: TGACCGTGTGGCAGGAGGGCACTGGGCAGACCCCAG...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGGGGCTCAGGCAGGTTaGAGGTCCAGCTTACTCTGG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSGAQAG*RSSLLW
Trigger: CCAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCC...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTTCATCCAGGCTGAAGTaGAGTGGTGTGATAACTGCT +
Preference number: 4 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISSSRLK*SGVITA
Trigger: AGCAGTTATCACACCACTGCACTTCAGCCTGGATGA...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGGCGAAGAGGAAGGCATaGTTCACCCGGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLAKRKA*FTRWEQ
Trigger: CTGCTCCCACCGGGTGAACCATGCCTTCCTCTTCGC...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCCAGCGGGGTTTGGGCTaGGCCTCCCACCGCCATATG +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFQRGLG*ASHRHM
Trigger: CATATGGCGGTGGGAGGCCCAGCCCAAACCCCGCTG...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTGGCATGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAGAGGCCGGCTTACTaGCATGGCTGGTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: LACSYELCTGKAWYVEAAQRPAY*HGWLSW
Trigger: CCAAGATAACCAGCCATGCCAGTAAGCCGGCCTCTG...AGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGCTGGTGCCCGAAGTTaGAGGTACCATCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVAGARS*RYHRGW
Trigger: CCAGCCACGATGGTACCTCCAACTTCGGGCACCAGC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTTTCTCCATCAGACCCTaGCAGGCCGAAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSFSIRP*QAEEPW
Trigger: CCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAA...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCGCCCGGGAAACCCAATaGATCCTTTGTCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARARETQ*ILCLRL
Trigger: AAGTCGGAGACAAAGGATCCATTGGGTTTCCCGGGC...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTGTCATGTTAAGGCAGTaGATGGTGATGTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCVMLRQ*MVMCWV
Trigger: GACCCAGCACATCACCATCCACTGCCTTAACATGAC...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGACCGCCATATGCTGGTaGGGGTTTGTGGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVTAICW*GFVGLV
Trigger: GACTAGCCCCACAAACCCTCACCAGCATATGGCGGT...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACTTTGATGGGCACAATTaGAGTAGAAGGGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNFDGHN*SRRGRR
Trigger: CCTTCGGCCCCTTCTACTTCAATTGTGCCCATCAAA...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCTCGCCTTGCTTCCCTaGTTTTCCTTCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVLALLP*FSFRTP
Trigger: CGGGGTCCTGAAGGAAAATCAGGGAAGCAAGGCGAG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGTGTAACTCTCTGGCCTaGGTGCTCCACTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMCNSLA*VLHWCP
Trigger: TGGACACCAGTGGAGCACTCAGGCCAGAGAGTTACA...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCCTCTTCCCTCCTCCGTaGGGCCTAGAGTGGCCACGA +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFLFPPP*GLEWPR
Trigger: TCGTGGCCACTCTAGGCCTCACGGAGGAGGGAAGAG...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTCCCTCAAGTTGGCTTaGATGTGGGGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSSLKLA*MWGSLG
Trigger: GCCCAAAGAGCCCCACATTCAAGCCAACTTGAGGGA...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTTGTGAGAGACAATTGTaGGCACCAGCGATTTCACAG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCCERQL*APAISQ
Trigger: CTGTGAAATCGCTGGTGCTCACAATTGTCTCTCACA...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTTCAAACTGGACTGCATaGGGGTTCATCTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCSNWTA*GFIFPK
Trigger: CTTTGGGAAGATGAACCCGCATGCAGTCCAGTTTGA...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGGTGCTGTTCTGGGAGTaGTGGTGCCCGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLVLFWE*WCPKLE
Trigger: CTCCAACTTCGGGCACCAGCACTCCCAGAACAGCAC...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCTTTGTCTCCGACTTTaGCCAGAGGCCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVLCLRL*PEALAS
Trigger: GGAAGCCAGGGCCTCTGGGCAAAGTCGGAGACAAAG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTAATCCCATAAATCCCTaGTCTCCCACAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSNPINP*SPTGPG
Trigger: GCCGGGGCCTGTGGGAGAGCAGGGATTTATGGGATT...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCCTGGGGGTCCCATCATaGCACGATCACCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSLGVPS*HDHPFL
Trigger: GAGAAAAGGGTGATCGTGGCATGATGGGACCCCCAG...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGGGGTCCGAAGAGACCTaGCATTCCTGGGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLGSEET*HSWEAH
Trigger: ATGGGCTTCCCAGGAATGGCAGGTCTCTTCGGACCC...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGTGCCCAGTGCCCTCCTaGCACACGGTCATGTTAAGG +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLCPVPS*HTVMLR
Trigger: CCTTAACATGACCGTGTGGCAGGAGGGCACTGGGCA...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGGCACCCAGGCCTCCCTaGTGCCTTAAAAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLAPRPP*CLKRTD
Trigger: GTCTGTCCTTTTAAGGCAGCAGGGAGGCCTGGGTGC...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTAGCAGGAACGATGATTaGATCTTGCAAGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCSRNDD*ILQGQA
Trigger: AGCCTGTCCTTGCAAGATGCAATCATCGTTCCTGCT...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CAACATCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGATGTTCATATGAGCTATaGACGGGCAAAGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: QHHMAKVIKQAEPRSTSGCSYEL*TGKAWY
Trigger: ATACCAGGCTTTGCCCGTGCATAGCTCATATGAACA...TCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCCCGATCCCGCTCCCATaGCAGGCCCCTACTTCATGC +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFPIPLP*QAPTSC
Trigger: GCATGAAGTAGGGGCCTGCCATGGGAGCGGGATCGG...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGAAGAGAGGTCCCAGTaGGGACTGGTACGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVEERSQ*GLVRVS
Trigger: GCTGACACGTACCAGTCCCCACTGGGACCTCTCTTC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGGTCCTTGATAGCCCTTaGCACCCTTGGCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLVLDSP*HPWLQC
Trigger: GCACTGGAGCCAAGGGTGCCAAGGGCTATCAAGGAC...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AAACCAGCTCTTCTTGGTCATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAATGCACGGGCAAAGCCTaGTATGTAGAAGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: KPALLGHAEGRSSHLLGQCTGKA*YVEAAQ
Trigger: TTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCA...TTGTCCCAGGAGGTGAGACGATCTACCTTCAGCATGACCAAGAAGAGCTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACGCCCAGGTCCACCTCTaGAGTTTGGCATGTTCATAT +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNAQVHL*SLACSY
Trigger: ATATGAACATGCCAAACTCCAGAGGTGGACCTGGGC...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
3UTR CAA 72 bp CCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTaGGTCATGCTGAAGGTAGATCGTCTCACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGKFQSHLNQLF*VMLKVDRLTSW
Trigger: CCAGGAGGTGAGACGATCTACCTTCAGCATGACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGGCGATGCGGCTTCCTaGGATGGTTCCATGTTGATG +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVGDAAS*DGSMLM
Trigger: CATCAACATGGAACCATCTCAGGAAGCCGCATCGCC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCAAAAAGCAGGAACGATaGTTGCATCTTGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRKKQER*LHLART
Trigger: TGTCCTTGCAAGATGCAATCATCGTTCCTGCTTTTT...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TTCCTCCCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACTCAAACTGGACTGCATaGGGGTTCATCTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FLPHIFRVSPGKFQSHLNSNWTA*GFIFPK
Trigger: CTTTGGGAAGATGAACCCGCATGCAGTCCAGTTTGA...GTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGGGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR GCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCCGAGGGGCCCGACGATaGCTTCCTTTCCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFRGARR*LPFPSS
Trigger: GCTTGATGGGAAAGGAAGGCATCGTCGGGCCCCTCG...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCCAAGATCATCTTGTTaGAATTGGATAGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: FHVDASPLSLALTQRRFCPRSSC*NWIGPP
Trigger: AGGGGGTCCTATCCAATTGCAACAAGATGATCTTGG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCGGTCCCAGTGGGGACTaGTACGTGTCAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFGPSGD*YVSACP
Trigger: TGGACAGGCTGACACGTACCAGTCCCCACTGGGACC...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCAGAGGCCGGCTTACTaGCATGGCTGGTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSQRPAY*HGWLSW
Trigger: CCAAGATAACCAGCCATGCCAGTAAGCCGGCCTCTG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCGTCCCTTCATGCCCTTaGGTCCCGGGTAGCCAATCG +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFVPSCP*VPGSQS
Trigger: CGATTGGCTACCCGGGACCCAAGGGCATGAAGGGAC...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCAACCCTGGCAACCCCTaGCTCCCCTTGTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFNPGNP*LPLSPW
Trigger: CCAAGGAGACAAGGGGAGCCAGGGGTTGCCAGGGTT...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGGTCCCCATACCACCTaGCATTCCAGGATGACCCAT +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSGPHTT*HSRMTH
Trigger: ATGGGTCATCCTGGAATGCCAGGTGGTATGGGGACC...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCCCATCAGCCCTTCCTaGCCTTTCTCGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVPISPS*PFSPCS
Trigger: AGAACATGGCGAGAAAGGCCAGGAAGGGCTGATGGG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCAGCACCAGCCGGTCTaGATAGCTGTAACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSQHQPV*IAVTLW
Trigger: CCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGTGCAGGAGACCTCGATaGTGTCAGAGGAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLCRRPR*CQRSSQ
Trigger: TTGGCTGCTCCTCTGACACCATCGAGGTCTCCTGCA...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTAGCTGTTGGGGGTCTTaGGTCCGGAAGGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSSCWGS*VRKVKS
Trigger: ACTCTTCACCTTCCGGACCCAAGACCCCCAACAGCT...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp ACACTGACATGTGGACAGAGACGTAAACGAAGACAGCAGGAAAACCCAAGAATGCTCTGGCTGGCTCTTTaGTTGGTCTTTGGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: TLTCGQRRKRRQQENPRMLWLAL*LVFGAK
Trigger: CTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG...CATTCTTGGGTTTTCCTGCTGTCTTCGTTTACGTCTCTGTCCACATGTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCCAGCGATTTCACAGTaGGAGGTAGCAAACGTGGGC +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSPAISQ*EVANVG
Trigger: GCCCACGTTTGCTACCTCCCACTGTGAAATCGCTGG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCGGCCCTTCTCGCCTTaGTTCCCTGATTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVRPFSP*FPDFPS
Trigger: TGAAGGAAAATCAGGGAAGCAAGGCGAGAAGGGCCG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCGCCCCTGCCTTGCCTTaGTTTCCCTTTGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFAPALP*FPFGPS
Trigger: AGAGGGACCAAAGGGAAAGCAAGGCAAGGCAGGGGC...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCCCACGTCTGGAAAGCTaGCCCAAGATCATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AERHYGVELRDSHYYSVSPRLES*PKIILL
Trigger: CAACAAGATGATCTTGGGGCAGCTTTCCAGACGTGG...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp TGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCTGGTATGTAGAAGCTaGTCAAACGCGTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: CSYELCTGKAWYVEAAQTLVCRS*SNACPT
Trigger: AGTTGGACACGCGTTTGAGCAGCTTCTACATACCAG...CGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp GGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCATGCTGAAGGTAGATAAGATGAAGCCCGACTaGAAAGGAATGACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GKFQSHLNQLFLVMLKVDKMKPD*KGMTPG
Trigger: CCCGGGAGTCATTCCTTTCCAGTCGGGCTTCATCTT...ATCTACCTTCAGCATGACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCCCCTTCCCTCAAGTTaGCTTGAATGTGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSPLPSS*LECGAL
Trigger: AAGAGCCCCACATTCAAGCCAACTTGAGGGAAGGGG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CCCCACATCTTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTCCACCTCTGGAGTTTaGCATGTTCATATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: PHIFRVSPGKFQSHLNQLSTSGV*HVHMSY
Trigger: ATAGCTCATATGAACATGCCAAACTCCAGAGGTGGA...GAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAAGATGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR TCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTTTTGATGGGCACAATTaGAGTAGAAGGGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSFDGHN*SRRGRR
Trigger: CCTTCGGCCCCTTCTACTTCAATTGTGCCCATCAAA...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR GCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCTCAGCCTGTCCACACTaGTTCCTCAGGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFSACPH*FLRWVQ
Trigger: CTGTACCCACCTGAGGAAGCAGTGTGGACAGGCTGA...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGTGCAGGAAATTCATCTaGACCCGGCTGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVCRKFI*TRLMAN
Trigger: GTTTGCCATCAGCCGGGTCCAGATGAATTTCCTGCA...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCCAGCTTACTCTGGCTaGCTCTTTGGTTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSPAYSG*LFGWSL
Trigger: CAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCTTTCTTCAAAGTCTGTaGCAAAATAATGGTAGCACC +
Preference number: 4 (lower is better)
Translates to: LRWFHVDASPLSLALTQRFLQSL*QNNGST
Trigger: GGTGCTACCATTATTTTGCCACAGACTTTGAAGAAA...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTTGTGAGAGACAATTGTaGGCACCAGCGATTTCACAG +
Preference number: 4 (lower is better)
Translates to: RREKDADDAPHPKVSSKSCERQL*APAISQ
Trigger: CTGTGAAATCGCTGGTGCTCACAATTGTCTCTCACA...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCCAACGCCGCTTTTGTaGTTGGTTTCTTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVPTPLL*LVSSRS
Trigger: TGACCTTGAAGAAACCAATCACAAAAGCGGCGTTGG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGAGGAAAACCCAAGAATaGGACAGAGGCCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: REKDADDAPHPKVSSKSVRKTQE*DRGQWI
Trigger: AATCCACTGGCCTCTGTCTCATTCTTGGGTTTTCCT...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR GCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCCCATCCACCATCTTCTaGTCACAGTCCATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFPSTIF*SQSMRS
Trigger: GGACCTCATGGACTGTGAGCAGAAGATGGTGGATGG...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CCA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGTCATCTTGTTGCAATTaGATAGGACCCCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLSSCCN*IGPPGG
Trigger: TCCTCCAGGGGGTCCTATCCAATTGCAACAAGATGA...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCAGGTCCAGCTTACTCTaGCTGGCTCTTTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFRSSLL*LALWLV
Trigger: GACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCT...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR TCA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCTCACAGGGTAGATACTaGACTGGCAGAGAGCACCTT +
Preference number: 4 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFSQGRY*TGREHL
Trigger: AAGGTGCTCTCTGCCAGTTCAGTATCTACCCTGTGA...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR TCA 90 bp GGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCATGCTGAAGGTAGATCACAGATGGGAAAATTaGGACTCGGTTAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: GKFQSHLNQLFLVMLKVDHRWEN*DSVRQH
Trigger: ATGTTGCCTAACCGAGTCTCAATTTTCCCATCTGTG...ATCTACCTTCAGCATGACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CCA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCAAATCTCTCTACTTCTaGTTTCTGGTAGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARKSLYF*FLVGFL
Trigger: CAAAAACCCTACCAGAAACCAGAAGTAGAGAGATTT...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS TCA 90 bp GCAGCAGGACAGGCACCCGGCGCTGCCCGCAGGCAGTCACCAGAGTaGCTGTGCGGCCTCGGAGCTCGAGGGCCAGGTGGTGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: AAGQAPGAARRQSPE*LCGLGARGPGGASA
Trigger: GGCGCTGGCACCACCTGGCCCTCGAGCTCCGAGGCCGCACAGTCACTCTGGTGACTGCCTGCGGGCAGCGCCGGGTGCCTGTCCTGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 90 bp GTGCGGCCTCGGAGCTCGAGGGCCAGGTGGTGCCAGCGCCCGTCGTaGATGTCGAGGTCGAAGGCCACTGAGCGCCGGGACCCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: VRPRSSRARWCQRPS*MSRSKATERRDPRW
Trigger: CCACCTCGGGTCCCGGCGCTCAGTGGCCTTCGACCTCGACATGCACGACGGGCGCTGGCACCACCTGGCCCTCGAGCTCCGAGGCCGCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS-3UTR CAA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCGTCCCGGAGCACCCGTaGGTCCCAGGCTGCCCCGGG +
Preference number: 5 (lower is better)
Translates to: GGSKRGHPQPEDLAASHAVPEHP*VPGCPG
Trigger: CCCGGGGCAGCCTGGGACCAACGGGTGCTCCGGGAC...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCTCCCGGATGCCCGGGTaGGCCCTGCTGGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPSRMPG*ALLAWL
Trigger: AAGCCAGGCCAGCAGGGCCAACCCGGGCATCCGGGA...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCGCGCCTTTCGATCCTTaGGGTCCCGGCCACCCCCGG +
Preference number: 5 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPAPFDP*GPGHPR
Trigger: CCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCCCCATCTTGCCCCTCTaGCCAGGAACGCCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPPILPL*PGTPGR
Trigger: CCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGG...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
71% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCTCGCCCGGCTGGCCTTaGGACCCAGGCTCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLSPGWP*DPGSPW
Trigger: CCAGGGGGAGCCTGGGTCCAAAGGCCAGCCGGGCGA...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTAAGCGTACGGCCTGCTaGGCTGGGGTCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGKRTAC*AGVCPV
Trigger: CACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCTT...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS TCA 90 bp CAGGTGGTGCCAGCGCCCGTCGTGCATGTCGAGGTCGAAGGCCACTaGGCGCCGGGACCCGAGGTGGACGACCGTCTTGCCGGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: QVVPAPVVHVEVEGH*APGPEVDDRLAGEE
Trigger: TTCCTCCCCGGCAAGACGGTCGTCCACCTCGGGTCCCGGCGCTCAGTGGCCTTCGACCTCGACATGCACGACGGGCGCTGGCACCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS-3UTR CAA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTCCCGGCATACCCATCTaGCCCCTCTTGCCAGGAACG +
Preference number: 5 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGPGIPI*PLLPGT
Trigger: CGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGG...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCCTTTCCACGGAGGCCTaGCACACCCTCCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPLSTEA*HTLLSR
Trigger: CCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAG...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGTCCCGGATGCCCGGGTaGGCCCTGCTGGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: GPSCYKHALPRRASRLGRSRMPG*ALLAWL
Trigger: AAGCCAGGCCAGCAGGGCCAACCCGGGCATCCGGGA...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGCTTACCATCGACCCCTaGGGTCCAGGCACGCCTGGG +
Preference number: 5 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPLTIDP*GPGTPG
Trigger: CCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTAAG...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS GCA 90 bp GAGCGCCGGGACCCGAGGTGGACGACCGTCTTGCCGGGGAGGAACTaGAGGCCCAGCTGCAGCTTGCGTTTCTGGCTGCGGACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: ERRDPRWTTVLPGRN*RPSCSLRFWLRTAK
Trigger: CTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACCTCGGGTCCCGGCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 90 bp GGTCGAAGGCCACTGAGCGCCGGGACCCGAGGTGGACGACCGTCTTaGCGGGGAGGAACTGCAGGCCCAGCTGCAGCTTGCGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: GRRPLSAGTRGGRPS*RGGTAGPAAACVSG
Trigger: GCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACCTCGGGTCCCGGCGCTCAGTGGCCTTCGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 90 bp GTCACCAGAGTGACTGTGCGGCCTCGGAGCTCGAGGGCCAGGTGGTaGCAGCGCCCGTCGTGCATGTCGAGGTCGAAGGCCACTGAGCGC +
Preference number: 5 (lower is better)
Translates to: VTRVTVRPRSSRARW*QRPSCMSRSKATER
Trigger: GCGCTCAGTGGCCTTCGACCTCGACATGCACGACGGGCGCTGGCACCACCTGGCCCTCGAGCTCCGAGGCCGCACAGTCACTCTGGTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 90 bp TCGTGCATGTCGAGGTCGAAGGCCACTGAGCGCCGGGACCCGAGGTaGACGACCGTCTTGCCGGGGAGGAACTGCAGGCCCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SCMSRSKATERRDPR*TTVLPGRNCRPSCS
Trigger: GCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACCTCGGGTCCCGGCGCTCAGTGGCCTTCGACCTCGACATGCACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 90 bp GGTCAGAGCGGGGCCCAAGACGGAGGCCAGGGACTGGCCTGGAGATaGGTCTGGAGAGTCAGAGGGAGGTGCCCGCCTGCCCACCTGCAA +
Preference number: 5 (lower is better)
Translates to: GQSGAQDGGQGLAWR*VWRVRGRCPPAHLQ
Trigger: TTGCAGGTGGGCAGGCGGGCACCTCCCTCTGACTCTCCAGACCCATCTCCAGGCCAGTCCCTGGCCTCCGTCTTGGGCCCCGCTCTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCGGCCCCGACGTCCCTTaGCTCCCCTCATGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPGPDVP*LPSCLV
Trigger: CACCAGGCATGAGGGGAGCAAAGGGACGTCGGGGCC...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp CCCCACGGCTGCCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAGGTCCCAGGAGCACCAGGCGGCCCCTaGGGTCCCATCTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PHGCLCHPSDPGVPKVPGAPGGP*GPISPG
Trigger: TCCAGGAGAGATGGGACCCAAGGGGCCGCCTGGTGC...TCCTGGGACCTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCTCTCCAGGCGGGCCCTaGGGTCCGAAGAGACCTGCC +
Preference number: 5 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLSPGGP*GPKRPA
Trigger: GGCAGGTCTCTTCGGACCCAAGGGCCCGCCTGGAGA...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCGAGGCAGGAGGGAGGTaGTCCACACTGATGATGGGC +
Preference number: 5 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPEAGGR*STLMMG
Trigger: GCCCATCATCAGTGTGGACAACCTCCCTCCTGCCTC...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS CCA 90 bp GTGGGAGCCTGGAGCCGGGCCCGCTGCGTAAAGATGAAGCCCGACTaGAAAGGAATGACTCCCGGGGGTGCAGGGCTCCCGGCCTTCGTC +
Preference number: 5 (lower is better)
Translates to: VGAWSRARCVKMKPD*KGMTPGGAGLPAFV
Trigger: GACGAAGGCCGGGAGCCCTGCACCCCCGGGAGTCATTCCTTTCCAGTCGGGCTTCATCTTTACGCAGCGGGCCCGGCTCCAGGCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 90 bp GCAGTCACCAGAGTGACTGTGCGGCCTCGGAGCTCGAGGGCCAGGTaGTGCCAGCGCCCGTCGTGCATGTCGAGGTCGAAGGCCACTGAG +
Preference number: 5 (lower is better)
Translates to: AVTRVTVRPRSSRAR*CQRPSCMSRSKATE
Trigger: CTCAGTGGCCTTCGACCTCGACATGCACGACGGGCGCTGGCACCACCTGGCCCTCGAGCTCCGAGGCCGCACAGTCACTCTGGTGACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS-3UTR CAA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGTTCCGGGGGCTGCTCTaGGGTCCGGCTTTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPFRGLL*GPAFFE
Trigger: CTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGAA...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGAACCCCTGGCTCCCCTaGTCTCCTTGGAATCCGGGA +
Preference number: 5 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPNPWLP*SPWNPG
Trigger: TCCCGGATTCCAAGGAGACAAGGGGAGCCAGGGGTT...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCCTCACCCAGCTGTCCTaGATAGCCCTTGGCACCCTT +
Preference number: 5 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPLTQLS*IALGTL
Trigger: AAGGGTGCCAAGGGCTATCAAGGACAGCTGGGTGAG...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp CAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCGGCCCCTGCCTTGCCTaGCTTTCCCTTTGGTCCCTC +
Preference number: 5 (lower is better)
Translates to: QGTQGLPVPRGLLDHPQGGPCLA*LSLWSL
Trigger: GAGGGACCAAAGGGAAAGCAAGGCAAGGCAGGGGCC...GCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GCGCCTTTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTATGCCAGCGGCCATCTaGGACCTTGCAGCCATCCAT +
Preference number: 5 (lower is better)
Translates to: APFDPLGPGHPRGPGCPGMPAAI*DLAAIH
Trigger: ATGGATGGCTGCAAGGTCCAAGATGGCCGCTGGCAT...ACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS TCA 90 bp CACCGTGAGCAGAGCAGGTGTGGAGTGCAGCACGGGCATGGCTGCTaGGGGGCGGCGTCCATCAGGAAGGGATGGGCGAGAAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: HREQSRCGVQHGHGC*GAASIRKGWARRAG
Trigger: GCCTGCTCTTCTCGCCCATCCCTTCCTGATGGACGCCGCCCCTCAGCAGCCATGCCCGTGCTGCACTCCACACCTGCTCTGCTCACGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 90 bp GAGGAAGGCATGGTTCACCCGGTGGGAGCAGAGGCTCAGCACCAGTaGCAGCTCTGTGCCCAAGGCGGCAGGAATGACGGTGCCCGTGGG +
Preference number: 5 (lower is better)
Translates to: EEGMVHPVGAEAQHQ*QLCAQGGRNDGARG
Trigger: CCCACGGGCACCGTCATTCCTGCCGCCTTGGGCACAGAGCTGGCACTGGTGCTGAGCCTCTGCTCCCACCGGGTGAACCATGCCTTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 90 bp GCGTGGGCTGTCACCCTCATCACCGTGAGCAGAGCAGGTGTGGAGTaGAGCACGGGCATGGCTGCTGAGGGGCGGCGTCCATCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: AWAVTLITVSRAGVE*STGMAAEGRRPSGR
Trigger: CCTTCCTGATGGACGCCGCCCCTCAGCAGCCATGCCCGTGCTGCACTCCACACCTGCTCTGCTCACGGTGATGAGGGTGACAGCCCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGAGGCCCAGCTGCAGCTaGCGTTTCTGGCTGCGGACA +
Preference number: 5 (lower is better)
Translates to: GPSCYKHALPRRASRLGRRPSCS*RFWLRT
Trigger: TGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCT...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp TCAAGGCCTGGCTCTCCCCGTTGCCCAATGAGGCCCTGCTCCCCAGGAGTGCCCGAAGGGGCCGAAGGCTaGGTAGGGAGGCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SRPGSPRCPMRPCSPGVPEGAEG*VGRLLG
Trigger: CCCCAAAAGCCTCCCTACCAAGCCTTCGGCCCCTTC...GGGCACTCCTGGGGAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGCCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCTTTGCCTGGCTCTCCCCGTaGCCCAATGAGGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: DPLGPGTPGGPIMPRSPFAWLSP*PNEALL
Trigger: GAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGC...AAAGGGTGATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGGGCGGGGCCCCTGCCTTGCCTaGCTTTCCCTTTGGTCCCTC +
Preference number: 5 (lower is better)
Translates to: GPSCYKHALPRRASRLGRGPCLA*LSLWSL
Trigger: GAGGGACCAAAGGGAAAGCAAGGCAAGGCAGGGGCC...CCGCCCCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCGATCACCCACAGGGCCCCGATGGCAAACTCGACCTaGGAGGCCGTGATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VPRVSRFPAVSSITHRAPMANST*EAVMGL
Trigger: CAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCCAT...CGGGGCCCTGTGGGTGATCGAGGAGACCGCGGGGAACCGGGAGACCCTGGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS GCA 90 bp CCGAGGTGGACGACCGTCTTGCCGGGGAGGAACTGCAGGCCCAGCTaGAGCTTGCGTTTCTGGCTGCGGACAGCGAAGAGGAAGGCATGG +
Preference number: 5 (lower is better)
Translates to: PRWTTVLPGRNCRPS*SLRFWLRTAKRKAW
Trigger: CCATGCCTTCCTCTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 90 bp TGGGAGCTGAGCCAGGAGTGGGGACGGCAGGTGCTGTTCTGGGAGTaGTGGTGCCCGAAGTTGGAGGTACCATCGTGGCTGGTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: WELSQEWGRQVLFWE*WCPKLEVPSWLVAE
Trigger: CTCGGCCACCAGCCACGATGGTACCTCCAACTTCGGGCACCAGCACTCCCAGAACAGCACCTGCCGTCCCCACTCCTGGCTCAGCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 90 bp AGCTCTGTGCCCAAGGCGGCAGGAATGACGGTGCCCGTGGGAGCCTaGAGCCGGGCCCGCTGCGTAAAGATGAAGCCCGACTGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SSVPKAAGMTVPVGA*SRARCVKMKPDWKG
Trigger: TCCTTTCCAGTCGGGCTTCATCTTTACGCAGCGGGCCCGGCTCCAGGCTCCCACGGGCACCGTCATTCCTGCCGCCTTGGGCACAGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS-3UTR CAA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCGAGGCCGTGATGGGCTaGAGACACGTCTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLEAVMG*RHVCPP
Trigger: TGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTC...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCGGGGCTCAGGCAGGTaGCAGGTCCAGCTTACTCTG +
Preference number: 5 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFRGSGR*QVQLTL
Trigger: CAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCCG...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS GCA 90 bp TGCCGGGGAGGAACTGCAGGCCCAGCTGCAGCTTGCGTTTCTGGCTaGGGACAGCGAAGAGGAAGGCATGGTTCACCCGGTGGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: CRGGTAGPAAACVSG*GQRRGRHGSPGGSR
Trigger: TCTGCTCCCACCGGGTGAACCATGCCTTCCTCTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 90 bp ATGCGGGTTCATCTTCCCAAAGAGGAAGGAGCCCCCAGGGTCGAGTaGAGGGTCCCTGTGGAAAGGCAGCAGGACAGGCACCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: MRVHLPKEEGAPRVE*RVPVERQQDRHPAL
Trigger: CAGCGCCGGGTGCCTGTCCTGCTGCCTTTCCACAGGGACCCTGCACTCGACCCTGGGGGCTCCTTCCTCTTTGGGAAGATGAACCCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 90 bp CTGAGCCAGGAGTGGGGACGGCAGGTGCTGTTCTGGGAGTGCTGGTaGCCGAAGTTGGAGGTACCATCGTGGCTGGTGGCCGAGTACTCC +
Preference number: 5 (lower is better)
Translates to: LSQEWGRQVLFWECW*PKLEVPSWLVAEYS
Trigger: GGAGTACTCGGCCACCAGCCACGATGGTACCTCCAACTTCGGGCACCAGCACTCCCAGAACAGCACCTGCCGTCCCCACTCCTGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS GCA 90 bp CTTGGGTCCCGGAGGCCCCATCAGCAGAGGGAAAGGCGTAGATCCTaGCAGGTGGAAGATCGAATAGCCACTGCTCGTGGGCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LGSRRPHQQRERRRS*QVEDRIATARGPGA
Trigger: AGCCCCCGGCCCACGAGCAGTGGCTATTCGATCTTCCACCTGGCAGGATCTACGCCTTTCCCTCTGCTGATGGGGCCTCCGGGACCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS GCA 90 bp GCAGCTCAAGAGTGGAACAACCAGCCATCTAGTCCCAGCCGCTTGTaGAGAGGAGGCAAGGGCAGCTCGGGATGGGGCCGTGGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: AAQEWNNQPSSPSRL*RGGKGSSGWGRGLP
Trigger: GGGCAAGCCACGGCCCCATCCCGAGCTGCCCTTGCCTCCTCTGCACAAGCGGCTGGGACTAGATGGCTGGTTGTTCCACTCTTGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 90 bp CGTTTCTGGCTGCGGACAGCGAAGAGGAAGGCATGGTTCACCCGGTaGGAGCAGAGGCTCAGCACCAGTGCCAGCTCTGTGCCCAAGGCG +
Preference number: 5 (lower is better)
Translates to: RFWLRTAKRKAWFTR*EQRLSTSASSVPKA
Trigger: CGCCTTGGGCACAGAGCTGGCACTGGTGCTGAGCCTCTGCTCCCACCGGGTGAACCATGCCTTCCTCTTCGCTGTCCGCAGCCAGAAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 90 bp GTCTTGCCGGGGAGGAACTGCAGGCCCAGCTGCAGCTTGCGTTTCTaGCTGCGGACAGCGAAGAGGAAGGCATGGTTCACCCGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: VLPGRNCRPSCSLRF*LRTAKRKAWFTRWE
Trigger: CTCCCACCGGGTGAACCATGCCTTCCTCTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 90 bp ACGATGCCTTCCTTTCCCATCAAGCCAGGTGGCCCCCGAGGGCCCTaGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: TMPSFPIKPGGPRGP*MPLKPMSPGGPCGR
Trigger: CCTCCCACAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCCACCTGGCTTGATGGGAAAGGAAGGCATCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS-3UTR CAA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCCCTTTGTCTCCGACTTaGCCCAGAGGCCCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFPLSPT*PRGPGF
Trigger: GAAGCCAGGGCCTCTGGGCAAAGTCGGAGACAAAGG...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGTCCCCACGGCTGCCTTaGTCACCCTTCGGACCCGGG +
Preference number: 5 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPESPRLP*SPFGPG
Trigger: CCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGGA...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTCGGCCATCTTGGACCTaGCAGCCATCCATGGACACC +
Preference number: 5 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGRPSWT*QPSMDT
Trigger: GGTGTCCATGGATGGCTGCAAGGTCCAAGATGGCCG...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS CCA 90 bp TTCCAGTGGGAGCTGAGCCAGGAGTGGGGACGGCAGGTGCTGTTCTaGGAGTGCTGGTGCCCGAAGTTGGAGGTACCATCGTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FQWELSQEWGRQVLF*ECWCPKLEVPSWLV
Trigger: CACCAGCCACGATGGTACCTCCAACTTCGGGCACCAGCACTCCCAGAACAGCACCTGCCGTCCCCACTCCTGGCTCAGCTCCCACTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCGATCCTTTGGGTCCCGGCCACCCCCGGGGTCCCGGATGCCCGGGTTGGCCCAGGCTTTTGGGGATTTaGGTGGCTGTGATCTTCTGT +
Preference number: 5 (lower is better)
Translates to: FDPLGPGHPRGPGCPGWPRLLGI*VAVIFC
Trigger: ACAGAAGATCACAGCCACCAAAATCCCCAAAAGCCT...GGGCCAACCCGGGCATCCGGGACCCCGGGGGTGGCCGGGACCCAAAGGATCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GGAGGTAGCAAACGTGGGCACCCCCAGCCCGAGGATCTCGCCGCTTCCCACGCCTTGGTAGGGAGGCTTTaGGGGATTTTGGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GGSKRGHPQPEDLAASHALVGRL*GILVAV
Trigger: CACAGCCACCAAAATCCCCAAAAGCCTCCCTACCAA...GGCGTGGGAAGCGGCGAGATCCTCGGGCTGGGGGTGCCCACGTTTGCTACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCCCCATCTTGCCCCTCTaGCCAGGAACGCCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSPILPL*PGTPGR
Trigger: CCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGG...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACGCCTGGCTCTCCCCGTaGCCCAATGAGGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHAWLSP*PNEALL
Trigger: GAGCAGGGCCTCATTGGGCAACGGGGAGAGCCAGGC...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GCTTTCCACGGAGGCCTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGTGCCTTGCTTTCCCTTaGGTCCCTCTGCGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: AFHGGLAHPPVQGTQGLPCLAFP*VPLRLS
Trigger: CGAAAGGCGCAGAGGGACCAAAGGGAAAGCAAGGCA...CGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp CCCCGAGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTTGGGTAACCCACTCTCACCCTaGAATCCTGGGGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: PRGPWMPLKPMSPGGPLGNPLSP*NPGGPC
Trigger: ACAGGGACCCCCAGGATTCAAGGGTGAGAGTGGGTT...ACCCAAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS CCA 90 bp AGCTGCAGCTTGCGTTTCTGGCTGCGGACAGCGAAGAGGAAGGCATaGTTCACCCGGTGGGAGCAGAGGCTCAGCACCAGTGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SCSLRFWLRTAKRKA*FTRWEQRLSTSASS
Trigger: AGAGCTGGCACTGGTGCTGAGCCTCTGCTCCCACCGGGTGAACCATGCCTTCCTCTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 90 bp GGCACTGGCAAAGGGTGTGGAGCAGCTGTCAAATGCTCCGGGTCTTaGGACTCGGCTGTACGCTTGGATGCAGCAGGGTTGGGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GTGKGCGAAVKCSGS*DSAVRLDAAGLGER
Trigger: CCTCTCCCCCAACCCTGCTGCATCCAAGCGTACAGCCGAGTCCCAAGACCCGGAGCATTTGACAGCTGCTCCACACCCTTTGCCAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp GCTTTCCACGGAGGCCTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGCATGGCTGGTTATCTaGGCCTCAGTCCGAGCTAGT +
Preference number: 5 (lower is better)
Translates to: AFHGGLAHPPVQGTQGLPAWLVI*ASVRAS
Trigger: ACTAGCTCGGACTGAGGCCAAGATAACCAGCCATGC...CGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGCCTTTGTCTCCGACTTaGCCCAGAGGCCCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: DEARAATNTHFHAERPGWPLSPT*PRGPGF
Trigger: GAAGCCAGGGCCTCTGGGCAAAGTCGGAGACAAAGG...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GGCAAACTCGACCTTGGAGGCCGTGATGGGCTTGAGACACGTCTGTCCACCATGCCCTCTGTTCCTCGCTaGCCAGGGGGACCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GKLDLGGRDGLETRLSTMPSVPR*PGGPSC
Trigger: ACAGCTGGGTCCCCCTGGCAAGCGAGGAACAGAGGG...CATGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAAAGCGTACGGCCTGCTaGGCTGGGGTCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: EGPSQHASHPGLPAALKGKRTAC*AGVCPV
Trigger: CACTGGGCAGACCCCAGCCAAGCAGGCCGTACGCTT...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGCGGCCATCTTGGACCTaGCAGCCATCCATGGACACC +
Preference number: 5 (lower is better)
Translates to: DEARAATNTHFHAERPGWRPSWT*QPSMDT
Trigger: GGTGTCCATGGATGGCTGCAAGGTCCAAGATGGCCG...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CTTGCACACCCTCCTGTCCAGGGTACCCAGGGTCTCCCGGTTCCCCGCGGTCTCCTCTTTGGTTGGTCTTaGGGGCTAAGCTGGGATCCA +
Preference number: 5 (lower is better)
Translates to: LAHPPVQGTQGLPVPRGLLFGWS*GLSWDP
Trigger: TGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAG...GAGACCGCGGGGAACCGGGAGACCCTGGGTACCCTGGACAGGAGGGTGTGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS GCA 90 bp GCTTGTGCAGAGGAGGCAAGGGCAGCTCGGGATGGGGCCGTGGCTTaGCCCAGCTCACAGACCAAGTCTGAGGCAGAACTGACATTGGAA +
Preference number: 5 (lower is better)
Translates to: ACAEEARAARDGAVA*PSSQTKSEAELTLE
Trigger: TTCCAATGTCAGTTCTGCCTCAGACTTGGTCTGTGAGCTGGGGCAAGCCACGGCCCCATCCCGAGCTGCCCTTGCCTCCTCTGCACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS GCA 90 bp CCCAGTGTAGCAGGCACTGGCAAAGGGTGTGGAGCAGCTGTCAAATaGTCCGGGTCTTGGGACTCGGCTGTACGCTTGGATGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PSVAGTGKGCGAAVK*SGSWDSAVRLDAAG
Trigger: CCCTGCTGCATCCAAGCGTACAGCCGAGTCCCAAGACCCGGAGCATTTGACAGCTGCTCCACACCCTTTGCCAGTGCCTGCTACACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp ATGGGGGAGGTTTGTGGGTGCTGGTGCGGGCAGAGGCCGGCTTACTaGCATGGCTGGTTATCTTGGCCTCAGTCCGAGCTAGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: MGEVCGCWCGQRPAY*HGWLSWPQSELVWE
Trigger: TTCCCACACTAGCTCGGACTGAGGCCAAGATAACCAGCCATGCCAGTAAGCCGGCCTCTGCCCGCACCAGCACCCACAAACCTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 90 bp CCTGGCCACCTGTTCTCCTCTCAGAGGCAGACAGCCTGTTCCAGGTaGCTAGTCGGGTTTTCAACAAAGGGCCCTCACCTGGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PGHLFSSQRQTACSR*LVGFSTKGPHLGSA
Trigger: GGCAGAGCCCAGGTGAGGGCCCTTTGTTGAAAACCCGACTAGCCACCTGGAACAGGCTGTCTGCCTCTGAGAGGAGAACAGGTGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp GGCAGAAGACTCCGAGCTGAGGCGTGGGCCAATGTAGAGCAGATCTaGGCACAAAGTTGTGCCCGGATCCCTTCCTGCTGGGAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GRRLRAEAWANVEQI*AQSCARIPSCWEPQ
Trigger: CTGAGGCTCCCAGCAGGAAGGGATCCGGGCACAACTTTGTGCCCAGATCTGCTCTACATTGGCCCACGCCTCAGCTCGGAGTCTTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp AGGGCCCTGGATGCCTTTGAAGCCAATGTCTCCAGGCGGGCCCTGTaGGAGGCAGAGAAAGGGCTGTCTGTACTTGGCAGCCACTGGGTA +
Preference number: 5 (lower is better)
Translates to: RALDAFEANVSRRAL*EAEKGLSVLGSHWV
Trigger: TACCCAGTGGCTGCCAAGTACAGACAGCCCTTTCTCTGCCTCCCACAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS-3UTR CAA 90 bp GATGAGGCCCGAGCTGCTACAAACACGCACTTCCACGCAGAGCGTCCAGGCTGGATCTTCAGGAGCTCCTaGGGTGGAGGCCAGGTGACA +
Preference number: 5 (lower is better)
Translates to: DEARAATNTHFHAERPGWIFRSS*GGGQVT
Trigger: TGTCACCTGGCCTCCACCCAAGGAGCTCCTGAAGAT...CCAGCCTGGACGCTCTGCGTGGAAGTGCGTGTTTGTAGCAGCTCGGGCCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp TCCTCCCTGGTCCAGCACCAGCCGGTCTGGATAGCTGTAACTCTCTGGCCTGAGTGCTGGTGCCCGAAGTaGGAGGTACCATCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SSLVQHQPVWIAVTLWPECWCPK*EVPSWL
Trigger: CAGCCACGATGGTACCTCCAACTTCGGGCACCAGCA...CTCAGGCCAGAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp AGGCAGGTTGCAGGTCCAGCTTACTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGAAGCCACAGTCTCCCTaGGGTCCCGGAGGCCCCATC +
Preference number: 5 (lower is better)
Translates to: RQVAGPAYSGWLFGWSLGKPQSP*GPGGPI
Trigger: GATGGGGCCTCCGGGACCCAAGGGAGACTGTGGCTT...CCCCAAAGACCAACCAAAGAGCCAGCCAGAGTAAGCTGGACCTGCAACCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp AGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCTCCAGCCCATGTCACCCTTaGCCCCATCGTGGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: SFHPRPLQGTPSKASLTSSPCHP*PHRGPF
Trigger: GAAAGGCCCACGATGGGGCAAAGGGTGACATGGGCT...GGAGGTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCGCGCCTTTCGATCCTTaGGGTCCCGGCCACCCCCGG +
Preference number: 5 (lower is better)
Translates to: LRWFHVDASPLSLALTQRAPFDP*GPGHPR
Trigger: CCGGGGGTGGCCGGGACCCAAAGGATCGAAAGGCGC...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCTCCCCACGGCTGCCTTaGTCACCCTTCGGACCCGGG +
Preference number: 5 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPSPRLP*SPFGPG
Trigger: CCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGGA...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCGATGATGGGCAGCTGTaGGGGGTCTTGGGTCCGGAA +
Preference number: 5 (lower is better)
Translates to: TLWPECSTGVHPRLESCPDDGQL*GVLGPE
Trigger: TTCCGGACCCAAGACCCCCAACAGCTGCCCATCATC...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACCGGGGCTCAGGCAGGTaGCAGGTCCAGCTTACTCTG +
Preference number: 5 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHRGSGR*QVQLTL
Trigger: CAGAGTAAGCTGGACCTGCAACCTGCCTGAGCCCCG...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS GCA 90 bp CTGAACTTTGGGGTAGAAGGACCGGCATACCCATCTTGCCCCTCTTaGCAGGAACGCCAGGCAGGCCTCGTTCTCCATCAGACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LNFGVEGPAYPSCPS*QERQAGLVLHQTLA
Trigger: TGCCAGGGTCTGATGGAGAACGAGGCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGTCCTTCTACCCCAAAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS CCA 90 bp TGTTCTGGGAGTGCTGGTGCCCGAAGTTGGAGGTACCATCGTGGCTaGTGGCCGAGTACTCCTGGTAGAACCAGGAGTAGGGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: CSGSAGARSWRYHRG*WPSTPGRTRSRGRR
Trigger: TCTCCTGCCCCTACTCCTGGTTCTACCAGGAGTACTCGGCCACCAGCCACGATGGTACCTCCAACTTCGGGCACCAGCACTCCCAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 90 bp AGGCTGGGTCACTTGCACAAGGGTTTGGGGGATCACCTAGTTGAATaGATTCTTCGAGGCCTAGGGCTCCTCCTAGGGCCTGCCGGGGGA +
Preference number: 5 (lower is better)
Translates to: RLGHLHKGLGDHLVE*ILRGLGLLLGPAGG
Trigger: TCCCCCGGCAGGCCCTAGGAGGAGCCCTAGGCCTCGAAGAATCCATTCAACTAGGTGATCCCCCAAACCCTTGTGCAAGTGACCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 90 bp GGGAAACTGAGGTTCAGAGAAGGGGTCTGCTTCTCTGAGGTCACCTaGAGAGTAGGTGGGCGAGAGGGCATGGCCCTTAGGAACCTGGGC +
Preference number: 5 (lower is better)
Translates to: GKLRFREGVCFSEVT*RVGGREGMALRNLG
Trigger: GCCCAGGTTCCTAAGGGCCATGCCCTCTCGCCCACCTACTCTCCAGGTGACCTCAGAGAAGCAGACCCCTTCTCTGAACCTCAGTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCTAGTCCTTTGGGGCTaGGTGGGCGTGGCGGGTGCC +
Preference number: 5 (lower is better)
Translates to: LRWFHVDASPLSLALTQRLVLWG*VGVAGA
Trigger: GGCACCCGCCACGCCCACCAAGCCCCAAAGGACTAG...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGATTCCGGGGGCTGCTCTaGGGTCCGGCTTTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: EGPSQHASHPGLPAALKGFRGLL*GPAFFE
Trigger: CTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGAA...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGACAGCTGTTGGGGGTCTaGGGTCCGGAAGGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: EGPSQHASHPGLPAALKGQLLGV*GPEGEE
Trigger: CTCTTCACCTTCCGGACCCAAGACCCCCAACAGCTG...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAGAGGCAGGAGGGAGGTaGTCCACACTGATGATGGGC +
Preference number: 5 (lower is better)
Translates to: EGPSQHASHPGLPAALKGEAGGR*STLMMG
Trigger: GCCCATCATCAGTGTGGACAACCTCCCTCCTGCCTC...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTAAGCCCATGTCACCTTaGGCTCCAGGAGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GQGHKASRAQVHLWSLACKPMSP*APGGPG
Trigger: CCCCGGCCCTCCTGGAGCCAAAGGTGACATGGGCTT...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCAAGCCCATGTCACCTTaGGCTCCAGGAGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPKPMSP*APGGPG
Trigger: CCCCGGCCCTCCTGGAGCCAAAGGTGACATGGGCTT...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCCACACCTGGAACCCCTaGTTCACCCTTTCAGTCCGG +
Preference number: 5 (lower is better)
Translates to: TLWPECSTGVHPRLESCPHTWNP*FTLSVR
Trigger: CCGGACTGAAAGGGTGAACAAGGGGTTCCAGGTGTG...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS TCA 90 bp GGGCCGTGGCTTGCCCCAGCTCACAGACCAAGTCTGAGGCAGAACTaGCATTGGAACTCAGGTCTGTCTGGCTCCGCAGCTTGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: GPWLAPAHRPSLRQN*HWNSGLSGSAACPS
Trigger: TGAAGGACAAGCTGCGGAGCCAGACAGACCTGAGTTCCAATGTCAGTTCTGCCTCAGACTTGGTCTGTGAGCTGGGGCAAGCCACGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS TCA 90 bp AGAGAGGCTGGGTCACTTGCACAAGGGTTTGGGGGATCACCTAGTTaGATGGATTCTTCGAGGCCTAGGGCTCCTCCTAGGGCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: REAGSLAQGFGGSPS*MDSSRPRAPPRACR
Trigger: CCGGCAGGCCCTAGGAGGAGCCCTAGGCCTCGAAGAATCCATTCAACTAGGTGATCCCCCAAACCCTTGTGCAAGTGACCCAGCCTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS TCA 90 bp GGGATGAGCCCATTCCTTGGTTCTGTAGATGGACCCTGCATCTTGTaGCCTGCCGAGCCCCAGGTGAGCATGAAGTCAGGGTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GMSPFLGSVDGPCIL*PAEPQVSMKSGWVS
Trigger: GCTCACCCACCCTGACTTCATGCTCACCTGGGGCTCGGCAGGTCACAAGATGCAGGGTCCATCTACAGAACCAAGGAATGGGCTCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 90 bp GTGGCAGTGGTCAAGTTCTCCAGGCCTAGCAGGGCGAGGTCGGACTaGAAGGTAAAAGGTCTGCCAGAGTCTTGGGAGAAGAGAGGTCCC +
Preference number: 5 (lower is better)
Translates to: VAVVKFSRPSRARSD*KVKGLPESWEKRGP
Trigger: GGGACCTCTCTTCTCCCAAGACTCTGGCAGACCTTTTACCTTCCAGTCCGACCTCGCCCTGCTAGGCCTGGAGAACTTGACCACTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 90 bp GTAGGGGCAGGAGATGAGGATAAAGCAGTAAATGGGGGAGGTTTGTaGGTGCTGGTGCGGGCAGAGGCCGGCTTACTGGCATGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: VGAGDEDKAVNGGGL*VLVRAEAGLLAWLV
Trigger: AACCAGCCATGCCAGTAAGCCGGCCTCTGCCCGCACCAGCACCCACAAACCTCCCCCATTTACTGCTTTATCCTCATCTCCTGCCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 90 bp GAAGTTGCAGGAGACCTCGATGGTGTCAGAGGAGCAGCCAAGGTTTaGATCCACCCAGTAGGTACCTGCAGGCAGCGTGGGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: EVAGDLDGVRGAAKV*IHPVGTCRQRGMEV
Trigger: CACCTCCATCCCACGCTGCCTGCAGGTACCTACTGGGTGGATCCAAACCTTGGCTGCTCCTCTGACACCATCGAGGTCTCCTGCAACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 90 bp CCGGTCTGGATAGCTGTAACTCTGTCACGAGGAGAGGGTGGTCATTaGGACCTTAGGGTCCTGGTCCAGCCTGGGGTTCAAGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: PVWIAVTLSRGEGGH*DLRVLVQPGVQAST
Trigger: TGTGGAGGCTTGAACCCCAGGCTGGACCAGGACCCTAAGGTCCCAATGACCACCCTCTCCTCGTGACAGAGTTACAGCTATCCAGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS-3UTR CAA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACGAGATGATCAAACTTTaGGAGGCGGGCTGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHEMIKL*EAGCWR
Trigger: CCGCCAGCAGCCCGCCTCCAAAAGTTTGATCATCTC...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGAGGCCCAGCTGCAGCTaGCGTTTCTGGCTGCGGACA +
Preference number: 5 (lower is better)
Translates to: HMAKVIKQAEPRSTSGVWRPSCS*RFWLRT
Trigger: TGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCT...CCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGTGTGGGGCTAGTCCTTaGGGGCTTGGTGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLCGASP*GLGGRG
Trigger: GCCACGCCCACCAAGCCCCAAAGGACTAGCCCCACA...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp CCGGGAGTCCCGAAGGTCCCAGGATTCCGAGGGGCCCGACGATGCCTTCCTTTCGTAGGATGGGGGCTTTaGATGGGCACAATTGAAGTA +
Preference number: 5 (lower is better)
Translates to: PGVPKVPGFRGARRCLPFVGWGL*MGTIEV
Trigger: TACTTCAATTGTGCCCATCAAAAGCCCCCATCCTAC...GAAAGGAAGGCATCGTCGGGCCCCTCGGAATCCTGGGACCTTCGGGACTCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCGATCCAATGGGCTTCTaGCTTCCAGTGGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: TLWPECSTGVHPRLESCPDPMGF*LPVGAE
Trigger: CTCAGCTCCCACTGGAAGCAAGAAGCCCATTGGATC...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCTTTCTAAGCTGGGATCCATaGTTCCCAAGGACACCCTAT +
Preference number: 5 (lower is better)
Translates to: DPLGPGTPGGPIMPRSPFLSWDP*FPRTPY
Trigger: ATAGGGTGTCCTTGGGAACAATGGATCCCAGCTTAG...AAAGGGTGATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS TCA 90 bp GATCCCTTCCTGCTGGGAGCCTCAGCTTCTAAGCACAGCCTGGCATaGAGACAGGGGGCTGGCCTGAATAACTCTCCTGCAGACTCCTCT +
Preference number: 5 (lower is better)
Translates to: DPFLLGASASKHSLA*RQGAGLNNSPADSS
Trigger: AGAGGAGTCTGCAGGAGAGTTATTCAGGCCAGCCCCCTGTCTTCATGCCAGGCTGTGCTTAGAAGCTGAGGCTCCCAGCAGGAAGGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp GTTTGTGGGTGCTGGTGCGGGCAGAGGCCGGCTTACTGGCATGGCTaGTTATCTTGGCCTCAGTCCGAGCTAGTGTGGGAATGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: VCGCWCGQRPAYWHG*LSWPQSELVWEWVF
Trigger: AAAAACCCATTCCCACACTAGCTCGGACTGAGGCCAAGATAACCAGCCATGCCAGTAAGCCGGCCTCTGCCCGCACCAGCACCCACAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 90 bp CCTCCAACCGAGATGGAAGGAAACCTTCTGGGCAGAGCTCACAACTaGCAGAGCCCCCAGAGGAGGGGTCACATGGCTAAGTACTTGCCT +
Preference number: 5 (lower is better)
Translates to: PPTEMEGNLLGRAHN*QSPQRRGHMAKYLP
Trigger: AGGCAAGTACTTAGCCATGTGACCCCTCCTCTGGGGGCTCTGCCAGTTGTGAGCTCTGCCCAGAAGGTTTCCTTCCATCTCGGTTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 90 bp TGCCTTCCTCTGAGCCTCAGCCTCTTCGCCTTTAGAATGGGTGCATaGTACAGCAGAGTGAGCAGAGGCTTTGGAGCCAAACGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: CLPLSLSLFAFRMGA*YSRVSRGFGAKRAQ
Trigger: CTGGGCCCGTTTGGCTCCAAAGCCTCTGCTCACTCTGCTGTACCATGCACCCATTCTAAAGGCGAAGAGGCTGAGGCTCAGAGGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp TTCATCAGCATCACCACCCAGTGTAGCAGGCACTGGCAAAGGGTGTaGAGCAGCTGTCAAATGCTCCGGGTCTTGGGACTCGGCTGTACG +
Preference number: 5 (lower is better)
Translates to: FISITTQCSRHWQRV*SSCQMLRVLGLGCT
Trigger: CGTACAGCCGAGTCCCAAGACCCGGAGCATTTGACAGCTGCTCCACACCCTTTGCCAGTGCCTGCTACACTGGGTGGTGATGCTGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp TGCAGACTCCTCTGGCTCTGGGATTCCATTTCTGGCTTGTCGTCCTaGCCACCTGTTCTCCTCTCAGAGGCAGACAGCCTGTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CRLLWLWDSISGLSS*PPVLLSEADSLFQV
Trigger: CACCTGGAACAGGCTGTCTGCCTCTGAGAGGAGAACAGGTGGCCAGGACGACAAGCCAGAAATGGAATCCCAGAGCCAGAGGAGTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGAAGGGGCCGAAGGCTaGGTAGGGAGGCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLEGAEG*VGRLLG
Trigger: CCCCAAAAGCCTCCCTACCAAGCCTTCGGCCCCTTC...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCTGCTGGTGCCCGAAGTaGGAGGTACCATCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPCWCPK*EVPSWL
Trigger: CAGCCACGATGGTACCTCCAACTTCGGGCACCAGCA...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCCCGGCATACCCATCTaGCCCCTCTTGCCAGGAACG +
Preference number: 5 (lower is better)
Translates to: LRWFHVDASPLSLALTQRPGIPI*PLLPGT
Trigger: CGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGG...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCGCACCAGGCGGCCCCTaGGGTCCCATCTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARAPGGP*GPISPG
Trigger: TCCAGGAGAGATGGGACCCAAGGGGCCGCCTGGTGC...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGGGGCCCTGGATGCCTTaGAAGCCAATGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVGPWMP*KPMSPG
Trigger: GCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCC...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp TACCATCGACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCTGCCCCAAGATCATCTaGTTGCAATTGGATAGGACC +
Preference number: 5 (lower is better)
Translates to: YHRPLGSRHAWGSHHATICPKII*LQLDRT
Trigger: GGTCCTATCCAATTGCAACAAGATGATCTTGGGGCA...GATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTCGATGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGCAGCTGTTGGGGGTCTaGGGTCCGGAAGGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVQLLGV*GPEGEE
Trigger: CTCTTCACCTTCCGGACCCAAGACCCCCAACAGCTG...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGATGGCTGGCTCTTTGGTaGGTCTTTGGGGCTAAGCTG +
Preference number: 5 (lower is better)
Translates to: EGPSQHASHPGLPAALKGWLALW*VFGAKL
Trigger: CAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCA...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGTGTACCGGCATACCCATCTaGCCCCTCTTGCCAGGAACG +
Preference number: 5 (lower is better)
Translates to: LKVDRLTSWDKNQPGGLCTGIPI*PLLPGT
Trigger: CGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGT...ACACAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS GCA 90 bp GAGCCCATTCCTTGGTTCTGTAGATGGACCCTGCATCTTGTGACCTaGCGAGCCCCAGGTGAGCATGAAGTCAGGGTGGGTGAGCAGAAA +
Preference number: 5 (lower is better)
Translates to: EPIPWFCRWTLHLVT*RAPGEHEVRVGEQK
Trigger: TTTCTGCTCACCCACCCTGACTTCATGCTCACCTGGGGCTCGGCAGGTCACAAGATGCAGGGTCCATCTACAGAACCAAGGAATGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS GCA 90 bp GGAGATGGGTCTGGAGAGTCAGAGGGAGGTGCCCGCCTGCCCACCTaGAATTCAGGTGAGCTAAGGTGTCTCTTCAGAGTCCTGACATTT +
Preference number: 5 (lower is better)
Translates to: GDGSGESEGGARLPT*NSGELRCLFRVLTF
Trigger: AAATGTCAGGACTCTGAAGAGACACCTTAGCTCACCTGAATTGCAGGTGGGCAGGCGGGCACCTCCCTCTGACTCTCCAGACCCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp GAAGGTAAAAGGTCTGCCAGAGTCTTGGGAGAAGAGAGGTCCCAGTaGGGACTGGTACGTGTCAGCCTGTCCACACTGCTTCCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: EGKRSARVLGEERSQ*GLVRVSLSTLLPQV
Trigger: CACCTGAGGAAGCAGTGTGGACAGGCTGACACGTACCAGTCCCCACTGGGACCTCTCTTCTCCCAAGACTCTGGCAGACCTTTTACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS-3UTR CAA 90 bp TTGGCATGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCTAGTCCTTTGGGGCTaGGTGGGCGTGGCGGGTGCC +
Preference number: 5 (lower is better)
Translates to: LACSYELCTGKAWYVEAALVLWG*VGVAGA
Trigger: GGCACCCGCCACGCCCACCAAGCCCCAAAGGACTAG...AGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp CACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGTTACTGGCTGACAGCTaGGCAGGTAGCAGCGGGGTT +
Preference number: 5 (lower is better)
Translates to: HMAKVIKQAEPRSTSGVWLLADS*AGSSGV
Trigger: AACCCCGCTGCTACCTGCCAAGCTGTCAGCCAGTAA...CCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCGTAAATGGGGGAGGTTaGTGGGTGCTGGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: LRWFHVDASPLSLALTQRVNGGG*WVLVRA
Trigger: TGCCCGCACCAGCACCCACAAACCTCCCCCATTTAC...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGGTTGCAGAGTAAATGGGGGAGGTTaGTGGGTGCTGGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: GQSLVCRSCSNACPTGCRVNGGG*WVLVRA
Trigger: TGCCCGCACCAGCACCCACAAACCTCCCCCATTTAC...TCTGCAACCAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp TCACATGGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGTTCCGGGGGCTGCTCTaGGGTCCGGCTTTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: SHGQGHKASRAQVHLWSLFRGLL*GPAFFE
Trigger: CTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGAA...CAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCCATGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCAACCCCTGGCTCCCCTaGTCTCCTTGGAATCCGGGA +
Preference number: 5 (lower is better)
Translates to: LRWFHVDASPLSLALTQRNPWLP*SPWNPG
Trigger: TCCCGGATTCCAAGGAGACAAGGGGAGCCAGGGGTT...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp ACTCTCTGGCCTGAGTGCTCCACTGGTGTCCATCCACGTCTGGAAAGCTGCCCCAACCCAATGGATCCTTaGTCTCCGACTTTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TLWPECSTGVHPRLESCPNPMDP*SPTLPR
Trigger: TCTGGGCAAAGTCGGAGACAAAGGATCCATTGGGTT...GGGGCAGCTTTCCAGACGTGGATGGACACCAGTGGAGCACTCAGGCCAGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCCCTCTGTTCCTCGCTaGCCAGGGGGACCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARPSVPR*PGGPSC
Trigger: ACAGCTGGGTCCCCCTGGCAAGCGAGGAACAGAGGG...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTTCGCCCGGCTGGCCTTaGGACCCAGGCTCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RREKDADDAPHPKVSSKSSPGWP*DPGSPW
Trigger: CCAGGGGGAGCCTGGGTCCAAAGGCCAGCCGGGCGA...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS TCA 90 bp CAGGGAGCAGCAGGGTCAAGTTGGGCCAGCAGGCTTTGGCACCTGTaGGCCGTGGGTTTGAATTTTGGATCCTCACTCATAGCCATAGGT +
Preference number: 5 (lower is better)
Translates to: QGAAGSSWASRLWHL*AVGLNFGSSLIAIG
Trigger: ACCTATGGCTATGAGTGAGGATCCAAAATTCAAACCCACGGCTCACAGGTGCCAAAGCCTGCTGGCCCAACTTGACCCTGCTGCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 90 bp CTGTGTGAACCTGGGGTTCTGGCTCCTTCTAATTCCAAGATTCTCTaGTCAGGGGACGATGCCTCCCTCAACCCTCGGGTTATGCTGCCT +
Preference number: 5 (lower is better)
Translates to: LCEPGVLAPSNSKIL*SGDDASLNPRVMLP
Trigger: AGGCAGCATAACCCGAGGGTTGAGGGAGGCATCGTCCCCTGAGCAGAGAATCTTGGAATTAGAAGGAGCCAGAACCCCAGGTTCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp AGCAGCCAAGGTTTGGATCCACCCAGTAGGTACCTGCAGGCAGCGTaGGATGGAGGTGATGTATGTATCTGGGGGATGAGCCCATTCCTT +
Preference number: 5 (lower is better)
Translates to: SSQGLDPPSRYLQAA*DGGDVCIWGMSPFL
Trigger: AAGGAATGGGCTCATCCCCCAGATACATACATCACCTCCATCCCACGCTGCCTGCAGGTACCTACTGGGTGGATCCAAACCTTGGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 90 bp AGGTGGCTGCTGGACACTGCTGACCCTTCCCCAAGCTGCTGTCAATaGGAGCTGGAGCTGTCATCTCAGATCTCTATGGGAACACAGTGT +
Preference number: 5 (lower is better)
Translates to: RWLLDTADPSPSCCQ*ELELSSQISMGTQC
Trigger: ACACTGTGTTCCCATAGAGATCTGAGATGACAGCTCCAGCTCCCATTGACAGCAGCTTGGGGAAGGGTCAGCAGTGTCCAGCAGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp TTAGCCATGACCTTCATCAGCATCACCACCCAGTGTAGCAGGCACTaGCAAAGGGTGTGGAGCAGCTGTCAAATGCTCCGGGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: LAMTFISITTQCSRH*QRVWSSCQMLRVLG
Trigger: TCCCAAGACCCGGAGCATTTGACAGCTGCTCCACACCCTTTGCCAGTGCCTGCTACACTGGGTGGTGATGCTGATGAAGGTCATGGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp TCCAGAGATGGCACAGATAAAGGCAGAAGACTCCGAGCTGAGGCGTaGGCCAATGTAGAGCAGATCTGGGCACAAAGTTGTGCCCGGATC +
Preference number: 5 (lower is better)
Translates to: SRDGTDKGRRLRAEA*ANVEQIWAQSCARI
Trigger: GATCCGGGCACAACTTTGTGCCCAGATCTGCTCTACATTGGCCCACGCCTCAGCTCGGAGTCTTCTGCCTTTATCTGTGCCATCTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp AGCTTCAAAAATCTGTCCATTCCAGGCCCGGAAGCGTACGGCCTGCTTGGCTGGTTGGTAGGGAGGCTTTaGGGGATTTTGGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SFKNLSIPGPEAYGLLGWLVGRL*GILVAV
Trigger: CACAGCCACCAAAATCCCCAAAAGCCTCCCTACCAA...CCAGCCAAGCAGGCCGTACGCTTCCGGGCCTGGAATGGACAGATTTTTGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp ATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGGCATGGCTGGTTATCTaGGCCTCAGTCCGAGCTAGT +
Preference number: 5 (lower is better)
Translates to: MLKVDRLTSWDKNQPGGLAWLVI*ASVRAS
Trigger: ACTAGCTCGGACTGAGGCCAAGATAACCAGCCATGC...CAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp GGCCAAGGTCATAAAGCAAGCAGAGCCCAGGTCCACCTCTGGAGTTTGGCATGTTGGGTCCGGCTTTCTTaGAGGCTTCCGATCCAATGG +
Preference number: 5 (lower is better)
Translates to: GQGHKASRAQVHLWSLACWVRLS*RLPIQW
Trigger: CCATTGGATCGGAAGCCTCAAAGAAAGCCGGACCCA...ACATGCCAAACTCCAGAGGTGGACCTGGGCTCTGCTTGCTTTATGACCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp TTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCAAGCCACAGTCTCCCTaGGGTCCCGGAGGCCCCATC +
Preference number: 5 (lower is better)
Translates to: FRVSPGKFQSHLNQLFLVKPQSP*GPGGPI
Trigger: GATGGGGCCTCCGGGACCCAAGGGAGACTGTGGCTT...GACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp TTGGCATGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCCCATCTTGCCCCTCTaGCCAGGAACGCCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LACSYELCTGKAWYVEAAPILPL*PGTPGR
Trigger: CCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGG...AGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACATGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGAAACCCAATGGATCCTTaGTCTCCGACTTTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: EGPSQHASHPGLPAALKGNPMDP*SPTLPR
Trigger: TCTGGGCAAAGTCGGAGACAAAGGATCCATTGGGTT...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGCAGTCCCGGTTCTCCTaGGGCCCCCATGCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLQSRFS*GPHASR
Trigger: CCGGGACGCATGGGGGCCCAAGGAGAACCGGGACTG...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCAGTCCCGGTTCTCCTaGGGCCCCCATGCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: REKDADDAPHPKVSSKSVQSRFS*GPHASR
Trigger: CCGGGACGCATGGGGGCCCAAGGAGAACCGGGACTG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTGGGCCCTGGATGCCTTaGAAGCCAATGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: FHVDASPLSLALTQRRFCGPWMP*KPMSPG
Trigger: GCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCC...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTTCCAAGGCCAGCCTCACATCATCTTGTTGCAATaGGATAGGACCCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: VKFSPKTSPGHAFQGQPHIILLQ*DRTPWR
Trigger: CCTCCAGGGGGTCCTATCCAATTGCAACAAGATGAT...GTGAGGCTGGCCTTGGAAGGCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CTCTTTGGTGCCCAGGGGCGTCTTAATGCTCTGGATGAGGTTGCTGAGGTAGTGAGGAGCAGCCAAGGTTaGGATCCACCCAGTAGGTAC +
Preference number: 5 (lower is better)
Translates to: LFGAQGRLNALDEVAEVVRSSQG*DPPSRY
Trigger: GTACCTACTGGGTGGATCCAAACCTTGGCTGCTCCT...CACTACCTCAGCAACCTCATCCAGAGCATTAAGACGCCCCTGGGCACCAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS GCA 90 bp TGTCCCCCAGTGCCAAGGTTTACGAGGGACACTGATAAACTGGTGTaGATCCAGAGGAGAGAGAGCACAGGAAGCAGAGGGCATGAAGCT +
Preference number: 5 (lower is better)
Translates to: CPPVPRFTRDTDKLV*IQRRESTGSRGHEA
Trigger: AGCTTCATGCCCTCTGCTTCCTGTGCTCTCTCTCCTCTGGATGCACACCAGTTTATCAGTGTCCCTCGTAAACCTTGGCACTGGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp AGTAGGTACCTGCAGGCAGCGTGGGATGGAGGTGATGTATGTATCTaGGGGATGAGCCCATTCCTTGGTTCTGTAGATGGACCCTGCATC +
Preference number: 5 (lower is better)
Translates to: SRYLQAAWDGGDVCI*GMSPFLGSVDGPCI
Trigger: GATGCAGGGTCCATCTACAGAACCAAGGAATGGGCTCATCCCCCAGATACATACATCACCTCCATCCCACGCTGCCTGCAGGTACCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 90 bp TGCTGGACACTGCTGACCCTTCCCCAAGCTGCTGTCAATGGGAGCTaGAGCTGTCATCTCAGATCTCTATGGGAACACAGTGTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: CWTLLTLPQAAVNGS*SCHLRSLWEHSVSG
Trigger: CCCAGAAACACTGTGTTCCCATAGAGATCTGAGATGACAGCTCCAGCTCCCATTGACAGCAGCTTGGGGAAGGGTCAGCAGTGTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp AGTTCTGTCCCCCAGTGCCAAGGTTTACGAGGGACACTGATAAACTaGTGTGCATCCAGAGGAGAGAGAGCACAGGAAGCAGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: SSVPQCQGLRGTLIN*CASRGERAQEAEGM
Trigger: CATGCCCTCTGCTTCCTGTGCTCTCTCTCCTCTGGATGCACACCAGTTTATCAGTGTCCCTCGTAAACCTTGGCACTGGGGGACAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCAGGTGGACGACCGTCTaGCCGGGGAGGAACTGCAGG +
Preference number: 5 (lower is better)
Translates to: AERHYGVELRDSHYYSVSRWTTV*PGRNCR
Trigger: CCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACCT...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGGCCCCGACGTCCCTTaGCTCCCCTCATGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: REKDADDAPHPKVSSKSVGPDVP*LPSCLV
Trigger: CACCAGGCATGAGGGGAGCAAAGGGACGTCGGGGCC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTAACCCACTCTCACCCTaGAATCCTGGGGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: FHVDASPLSLALTQRRFCNPLSP*NPGGPC
Trigger: ACAGGGACCCCCAGGATTCAAGGGTGAGAGTGGGTT...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGTCTCCAGGCGGGCCCTaGGGTCCGAAGAGACCTGCC +
Preference number: 5 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLSPGGP*GPKRPA
Trigger: GGCAGGTCTCTTCGGACCCAAGGGCCCGCCTGGAGA...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGATGCCCCAAGATCATCTaGTTGCAATTGGATAGGACC +
Preference number: 5 (lower is better)
Translates to: EGPSQHASHPGLPAALKGCPKII*LQLDRT
Trigger: GGTCCTATCCAATTGCAACAAGATGATCTTGGGGCA...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CTGAGATGGTTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCAGGAGCAGCCAAGGTTaGGATCCACCCAGTAGGTAC +
Preference number: 5 (lower is better)
Translates to: LRWFHVDASPLSLALTQRRSSQG*DPPSRY
Trigger: GTACCTACTGGGTGGATCCAAACCTTGGCTGCTCCT...GCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAACCATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GACCCCTTGGGTCCAGGCACGCCTGGGGGTCCCATCATGCCACGATCACCCTTTAAAATTCCCCAAACTTaGTCATTTGGAGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: DPLGPGTPGGPIMPRSPFKIPQT*SFGGER
Trigger: TCTCTCTCCTCCAAATGACAAAGTTTGGGGAATTTT...AAAGGGTGATCGTGGCATGATGGGACCCCCAGGCGTGCCTGGACCCAAGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS-3UTR CAA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGCACCTTCTGAAGGCATaGAGTTCCCACCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLHLLKA*SSHLWP
Trigger: AGGCCAGAGGTGGGAACTCAATGCCTTCAGAAGGTG...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS TCA 90 bp GGTGGGTACAGTAATTGTGAGCGACCTGCGTCACAGGGTAGATACTaGACTGGCAGAGAGCACCTTCAAACTGGACTGCATGCGGGTTCA +
Preference number: 5 (lower is better)
Translates to: GGYSNCERPASQGRY*TGREHLQTGLHAGS
Trigger: TGAACCCGCATGCAGTCCAGTTTGAAGGTGCTCTCTGCCAGTTCAGTATCTACCCTGTGACGCAGGTCGCTCACAATTACTGTACCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS TCA 90 bp ATTCGTGAAAGGGGTAGAGGACTGAACCTACCTCTGGAGTTGTTCTaGGAATTACACGAGGTGGTGCATGGAGGGTGCTGGGCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: IRERGRGLNLPLELF*ELHEVVHGGCWAKG
Trigger: GCCCTTTGCCCAGCACCCTCCATGCACCACCTCGTGTAATTCTCAGAACAACTCCAGAGGTAGGTTCAGTCCTCTACCCCTTTCACGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485397.1
CDS-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGTGTGGGGCTAGTCCTTaGGGGCTTGGTGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: REKDADDAPHPKVSSKSVCGASP*GLGGRG
Trigger: GCCACGCCCACCAAGCCCCAAAGGACTAGCCCCACA...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGCGTGTCCAACTGTTGGTAGGGAGGCTTTaGGGGATTTTGGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LCTGKAWYVEAAQTRVQLLVGRL*GILVAV
Trigger: CACAGCCACCAAAATCCCCAAAAGCCTCCCTACCAA...CAGTTGGACACGCGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp TGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGTGCTGGTGCCCGAAGTaGGAGGTACCATCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: CSYELCTGKAWYVEAAQTCWCPK*EVPSWL
Trigger: CAGCCACGATGGTACCTCCAACTTCGGGCACCAGCA...CGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGAAGCCACAGTCTCCCTaGGGTCCCGGAGGCCCCATC +
Preference number: 5 (lower is better)
Translates to: REKDADDAPHPKVSSKSVKPQSP*GPGGPI
Trigger: GATGGGGCCTCCGGGACCCAAGGGAGACTGTGGCTT...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTTCCCCTTTCTGTCCTTaGGCTCCAGGAGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: RREKDADDAPHPKVSSKSSPFCP*APGGPG
Trigger: CCCCGGCCCTCCTGGAGCCAAAGGACAGAAAGGGGA...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCCTCACCCAGCTGTCCTaGATAGCCCTTGGCACCCTT +
Preference number: 5 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARLTQLS*IALGTL
Trigger: AAGGGTGCCAAGGGCTATCAAGGACAGCTGGGTGAG...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTGCCTTGCTTTCCCTTaGGTCCCTCTGCGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARCLAFP*VPLRLS
Trigger: CGAAAGGCGCAGAGGGACCAAAGGGAAAGCAAGGCA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCATGGCAAACTCGACCTaGGAGGCCGTGATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARMANST*EAVMGL
Trigger: CAAGCCCATCACGGCCTCCAAGGTCGAGTTTGCCAT...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCCTAAGCTGGGATCCATaGTTCCCAAGGACACCCTAT +
Preference number: 5 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPLSWDP*FPRTPY
Trigger: ATAGGGTGTCCTTGGGAACAATGGATCCCAGCTTAG...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp CTCTGGCTGGCTCTTTGGTTGGTCTTTGGGGCTAAGCTGGGATCCATTGTTCCCAACGATGATTGCATCTaGCAAGGACAGGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LWLALWLVFGAKLGSIVPNDDCI*QGQAPG
Trigger: TCCAGGAGCCTGTCCTTGCAAGATGCAATCATCGTT...GGGAACAATGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS TCA 90 bp GGGACAAAGTGCAGGAGGAGAGGCTATCACAATGGCTCAGAGGCTTaGAAAGAGCTCAGGGTCAGACCATGTTCTCTGATATGGGACAGG +
Preference number: 5 (lower is better)
Translates to: GTKCRRRGYHNGSEA*KELRVRPCSLIWDR
Trigger: CCTGTCCCATATCAGAGAACATGGTCTGACCCTGAGCTCTTTTCAAGCCTCTGAGCCATTGTGATAGCCTCTCCTCCTGCACTTTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS GCA 90 bp AAGAAAGGTGGCCGCCCAGAGTGGAGTGAGAAGGCTGCTGCTTCGTaGCTCAGTTTCCTCATCCGTCTAGTGAGGATGGTAATGTATCAA +
Preference number: 5 (lower is better)
Translates to: KKGGRPEWSEKAAAS*LSFLIRLVRMVMYQ
Trigger: TTGATACATTACCATCCTCACTAGACGGATGAGGAAACTGAGGCACGAAGCAGCAGCCTTCTCACTCCACTCTGGGCGGCCACCTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp GAATATTTGGAAGATAACAGAGACCAAAGACTCTGGCTCTGGGCCTaGCGTAGTGCCGGTGCTCAGGAATCACCCTTAGCCAAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: EYLEDNRDQRLWLWA*RSAGAQESPLAKRS
Trigger: GCTTCTCTTGGCTAAGGGTGATTCCTGAGCACCGGCACTACGCCAGGCCCAGAGCCAGAGTCTTTGGTCTCTGTTATCTTCCAAATATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp AGAAAACGGGCCAGGGACAAAGTGCAGGAGGAGAGGCTATCACAATaGCTCAGAGGCTTGAAAAGAGCTCAGGGTCAGACCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RKRARDKVQEERLSQ*LRGLKRAQGQTMFS
Trigger: AGAGAACATGGTCTGACCCTGAGCTCTTTTCAAGCCTCTGAGCCATTGTGATAGCCTCTCCTCCTGCACTTTGTCCCTGGCCCGTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS CCA 90 bp GCCCCCAGTTCTCACAACCTGGGAGGTATCTCGGTTCCACGGTCATaGCTAGAGCACGGGTTGGGTTTCTCTTTATTTTGCAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: APSSHNLGGISVPRS*LEHGLGFSLFCRQE
Trigger: TTCTTGTCTGCAAAATAAAGAGAAACCCAACCCGTGCTCTAGCCATGACCGTGGAACCGAGATACCTCCCAGGTTGTGAGAACTGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS-3UTR CAA 90 bp ATGCTGAAGGTAGATCGTCTCACCTCCTGGGACAAGAATCAGCCAGGTGGGCTGAGGCTTTTGGGGATTTaGGTGGCTGTGATCTTCTGT +
Preference number: 5 (lower is better)
Translates to: MLKVDRLTSWDKNQPGGLRLLGI*VAVIFC
Trigger: ACAGAAGATCACAGCCACCAAAATCCCCAAAAGCCT...CAGCCCACCTGGCTGATTCTTGTCCCAGGAGGTGAGACGATCTACCTTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGAAGGGGCCGAAGGCTaGGTAGGGAGGCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: RREKDADDAPHPKVSSKSEGAEG*VGRLLG
Trigger: CCCCAAAAGCCTCCCTACCAAGCCTTCGGCCCCTTC...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCGCATGGCTGGTTATCTaGGCCTCAGTCCGAGCTAGT +
Preference number: 5 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARAWLVI*ASVRAS
Trigger: ACTAGCTCGGACTGAGGCCAAGATAACCAGCCATGC...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCTTTCCACGGAGGCCTaGCACACCCTCCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RREKDADDAPHPKVSSKSLSTEA*HTLLSR
Trigger: CCTGGACAGGAGGGTGTGCAAGGCCTCCGTGGAAAG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCTCTTTGGTTGGTCTTaGGGGCTAAGCTGGGATCCA +
Preference number: 5 (lower is better)
Translates to: FHVDASPLSLALTQRRFCLFGWS*GLSWDP
Trigger: TGGATCCCAGCTTAGCCCCAAAGACCAACCAAAGAG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS GCA 90 bp AGATGCCCCAAATCCTCAGACATCTGCCAGTGCTCAGAGGAGCCTTaGAAGTCACCTTCCTTAACCCTCTTCAGTTACAGATGGGACAAC +
Preference number: 5 (lower is better)
Translates to: RCPKSSDICQCSEEP*KSPSLTLFSYRWDN
Trigger: GTTGTCCCATCTGTAACTGAAGAGGGTTAAGGAAGGTGACTTGCAAGGCTCCTCTGAGCACTGGCAGATGTCTGAGGATTTGGGGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp CAAGCTGCTGTCAATGGGAGCTGGAGCTGTCATCTCAGATCTCTATaGGAACACAGTGTTTCTGGGAGGAGACTTAGGTCTTGGATGGGA +
Preference number: 5 (lower is better)
Translates to: QAAVNGSWSCHLRSL*EHSVSGRRLRSWMG
Trigger: TCCCATCCAAGACCTAAGTCTCCTCCCAGAAACACTGTGTTCCCATAGAGATCTGAGATGACAGCTCCAGCTCCCATTGACAGCAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp CTTCTAGAATATTTGGAAGATAACAGAGACCAAAGACTCTGGCTCTaGGCCTGGCGTAGTGCCGGTGCTCAGGAATCACCCTTAGCCAAG +
Preference number: 5 (lower is better)
Translates to: LLEYLEDNRDQRLWL*AWRSAGAQESPLAK
Trigger: CTTGGCTAAGGGTGATTCCTGAGCACCGGCACTACGCCAGGCCCAGAGCCAGAGTCTTTGGTCTCTGTTATCTTCCAAATATTCTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp GGAGTTGCTGGGGCAGTTTCTAGTTCAGTTGGGAAGATTTTCCAATaGAGCGGTCCAGAGATGGCACAGATAAAGGCAGAAGACTCCGAG +
Preference number: 5 (lower is better)
Translates to: GVAGAVSSSVGKIFQ*SGPEMAQIKAEDSE
Trigger: CTCGGAGTCTTCTGCCTTTATCTGTGCCATCTCTGGACCGCTCCATTGGAAAATCTTCCCAACTGAACTAGAAACTGCCCCAGCAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGTAAATGGGGGAGGTTaGTGGGTGCTGGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: REKDADDAPHPKVSSKSVVNGGG*WVLVRA
Trigger: TGCCCGCACCAGCACCCACAAACCTCCCCCATTTAC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp TTTAGGGTCTCCCCTGGTAAATTCCAGTCTCACCTAAACCAGCTCTTCTTGGTCGATCCAATGGGCTTCTaGCTTCCAGTGGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: FRVSPGKFQSHLNQLFLVDPMGF*LPVGAE
Trigger: CTCAGCTCCCACTGGAAGCAAGAAGCCCATTGGATC...GACCAAGAAGAGCTGGTTTAGGTGAGACTGGAATTTACCAGGGGAGACCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp TTCCATGTTGATGCTTCACCTCTAAGCCTAGCCCTGACCCAACGCCGCTTTTGTCACACCTGGAACCCCTaGTTCACCCTTATCACCTTT +
Preference number: 5 (lower is better)
Translates to: FHVDASPLSLALTQRRFCHTWNP*FTLITF
Trigger: AAAGGTGATAAGGGTGAACAAGGGGTTCCAGGTGTG...ACAAAAGCGGCGTTGGGTCAGGGCTAGGCTTAGAGGTGAAGCATCAACATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGGAGGCCGTGATGGGCTaGAGACACGTCTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLEAVMG*RHVCPP
Trigger: TGGTGGACAGACGTGTCTCAAGCCCATCACGGCCTC...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GCTGAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCATGCCAGCGGCCATCTaGGACCTTGCAGCCATCCAT +
Preference number: 5 (lower is better)
Translates to: AERHYGVELRDSHYYSVSMPAAI*DLAAIH
Trigger: ATGGATGGCTGCAAGGTCCAAGATGGCCGCTGGCAT...GGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGGATGATGGGCAGCTGTaGGGGGTCTTGGGTCCGGAA +
Preference number: 5 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLDDGQL*GVLGPE
Trigger: TTCCGGACCCAAGACCCCCAACAGCTGCCCATCATC...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCTTCCCTCAAGTTGGCTaGAATGTGGGGCTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARFPQVG*NVGLFG
Trigger: CCCAAAGAGCCCCACATTCAAGCCAACTTGAGGGAA...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS TCA 90 bp TGGCGTAGTGCCGGTGCTCAGGAATCACCCTTAGCCAAGAGAAGCTaGTATTTTAAGAAGGGTAGCAGGAAAGACTGGAAGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: WRSAGAQESPLAKRS*YFKKGSRKDWKVVM
Trigger: CATCACCACCTTCCAGTCTTTCCTGCTACCCTTCTTAAAATATCAGCTTCTCTTGGCTAAGGGTGATTCCTGAGCACCGGCACTACGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS TCA 90 bp TCCTCACTCATAGCCATAGGTCCTGAATGTATCTATGCCTTCCTCTaGGCCTCAGCCTCTTCGCCTTTAGAATGGGTGCATGGTACAGCA +
Preference number: 5 (lower is better)
Translates to: SSLIAIGPECIYAFL*ASASSPLEWVHGTA
Trigger: TGCTGTACCATGCACCCATTCTAAAGGCGAAGAGGCTGAGGCTCAGAGGAAGGCATAGATACATTCAGGACCTATGGCTATGAGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGTTACTGGCTGACAGCTaGGCAGGTAGCAGCGGGGTT +
Preference number: 5 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLLLADS*AGSSGV
Trigger: AACCCCGCTGCTACCTGCCAAGCTGTCAGCCAGTAA...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GAAGGGCCAAGCCAACATGCTTCGCACCCAGGCCTCCCTGCTGCCTTAAAAGGATATTATTCTGTCTCCTaGACCCAAATTTACACTTGG +
Preference number: 5 (lower is better)
Translates to: EGPSQHASHPGLPAALKGYYSVS*TQIYTW
Trigger: CCAAGTGTAAATTTGGGTCAAGGAGACAGAATAATA...TCCTTTTAAGGCAGCAGGGAGGCCTGGGTGCGAAGCATGTTGGCTTGGCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp GGCAGGGGAGGGTGTGTGTGTGTTTCCAGATCATGTCTTTGTGGGGGCATATCTCTAAACCAGCTCTTCTaGGTCATGCTGAAGGTAGAT +
Preference number: 5 (lower is better)
Translates to: GRGGCVCVSRSCLCGGISLNQLF*VMLKVD
Trigger: ATCTACCTTCAGCATGACCAAGAAGAGCTGGTTTAG...AGATATGCCCCCACAAAGACATGATCTGGAAACACACACACACCCTCCCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS TCA 90 bp AGCCGTGGGTTTGAATTTTGGATCCTCACTCATAGCCATAGGTCCTaGATGTATCTATGCCTTCCTCTGAGCCTCAGCCTCTTCGCCTTT +
Preference number: 5 (lower is better)
Translates to: SRGFEFWILTHSHRS*MYLCLPLSLSLFAF
Trigger: AAAGGCGAAGAGGCTGAGGCTCAGAGGAAGGCATAGATACATTCAGGACCTATGGCTATGAGTGAGGATCCAAAATTCAAACCCACGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp TGTGATTGGTTTCTTCAAGGTCAAGTTTTCACCCAAGACCTCTCCAGGGCACGCAGGCTTTTGGGGATTTaGGTGGCTGTGATCTTCTGT +
Preference number: 5 (lower is better)
Translates to: CDWFLQGQVFTQDLSRARRLLGI*VAVIFC
Trigger: ACAGAAGATCACAGCCACCAAAATCCCCAAAAGCCT...GCGTGCCCTGGAGAGGTCTTGGGTGAAAACTTGACCTTGAAGAAACCAATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGGATCCAATGGGCTTCTaGCTTCCAGTGGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: REKDADDAPHPKVSSKSVDPMGF*LPVGAE
Trigger: CTCAGCTCCCACTGGAAGCAAGAAGCCCATTGGATC...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGTGGGTCCGGCTTTCTTaGAGGCTTCCGATCCAATGG +
Preference number: 5 (lower is better)
Translates to: REKDADDAPHPKVSSKSVWVRLS*RLPIQW
Trigger: CCATTGGATCGGAAGCCTCAAAGAAAGCCGGACCCA...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS GCA 90 bp TTCAGCAGGTACCAGCAGTGTGTTGGCTCAGTGCTGTGTGGCATATaGCCCTGGTCTTTATTTTTGCAACAGTCTTCTACTGTCATTGCT +
Preference number: 5 (lower is better)
Translates to: FSRYQQCVGSVLCGI*PWSLFLQQSSTVIA
Trigger: AGCAATGACAGTAGAAGACTGTTGCAAAAATAAAGACCAGGGGCATATGCCACACAGCACTGAGCCAACACACTGCTGGTACCTGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS-3UTR CAA 90 bp TGTTCATATGAGCTATGCACGGGCAAAGCCTGGTATGTAGAAGCTGCTCAAACGGTAGGATGGGGGCTTTaGATGGGCACAATTGAAGTA +
Preference number: 5 (lower is better)
Translates to: CSYELCTGKAWYVEAAQTVGWGL*MGTIEV
Trigger: TACTTCAATTGTGCCCATCAAAAGCCCCCATCCTAC...CGTTTGAGCAGCTTCTACATACCAGGCTTTGCCCGTGCATAGCTCATATGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGTTCCCTCAAGTTGGCTaGAATGTGGGGCTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: REKDADDAPHPKVSSKSVFPQVG*NVGLFG
Trigger: CCCAAAGAGCCCCACATTCAAGCCAACTTGAGGGAA...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp AGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTGCCCAAGATCATCTTGTaGCAATTGGATAGGACCCCC +
Preference number: 5 (lower is better)
Translates to: REKDADDAPHPKVSSKSVPKIIL*QLDRTP
Trigger: GGGGGTCCTATCCAATTGCAACAAGATGATCTTGGG...CACAGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTCCCAAGATCATCTTGTaGCAATTGGATAGGACCCCC +
Preference number: 5 (lower is better)
Translates to: RREKDADDAPHPKVSSKSPKIIL*QLDRTP
Trigger: GGGGGTCCTATCCAATTGCAACAAGATGATCTTGGG...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCTGGCTGGCTCTTTGGTaGGTCTTTGGGGCTAAGCTG +
Preference number: 5 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFWLALW*VFGAKL
Trigger: CAGCTTAGCCCCAAAGACCAACCAAAGAGCCAGCCA...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS GCA 90 bp AACACCTACAATTATTCAGCAGGTACCAGCAGTGTGTTGGCTCAGTaGTGTGTGGCATATGCCCCTGGTCTTTATTTTTGCAACAGTCTT +
Preference number: 5 (lower is better)
Translates to: NTYNYSAGTSSVLAQ*CVAYAPGLYFCNSL
Trigger: AAGACTGTTGCAAAAATAAAGACCAGGGGCATATGCCACACAGCACTGAGCCAACACACTGCTGGTACCTGCTGAATAATTGTAGGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS CCA 90 bp ACAATTATTCAGCAGGTACCAGCAGTGTGTTGGCTCAGTGCTGTGTaGCATATGCCCCTGGTCTTTATTTTTGCAACAGTCTTCTACTGT +
Preference number: 5 (lower is better)
Translates to: TIIQQVPAVCWLSAV*HMPLVFIFATVFYC
Trigger: ACAGTAGAAGACTGTTGCAAAAATAAAGACCAGGGGCATATGCCACACAGCACTGAGCCAACACACTGCTGGTACCTGCTGAATAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS-3UTR CAA 90 bp AGGAGAGAGAAAGATGCGGATGATGCCCCACATCCAAAAGTTTCTTCAAAGTCTGTAGGATGGGGGCTTTaGATGGGCACAATTGAAGTA +
Preference number: 5 (lower is better)
Translates to: RREKDADDAPHPKVSSKSVGWGL*MGTIEV
Trigger: TACTTCAATTGTGCCCATCAAAAGCCCCCATCCTAC...AGACTTTGAAGAAACTTTTGGATGTGGGGCATCATCCGCATCTTTCTCTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS-3UTR CAA 90 bp GAACGTCACTATGGTGTCGAACTCCGAGATTCCCATTATTATTCTGTCTCCTTGAATTCAAGCGCCGACTaGTTCGCTGATGTAGCACAA +
Preference number: 5 (lower is better)
Translates to: ERHYGVELRDSHYYSVSLNSSAD*FADVAQ
Trigger: TTGTGCTACATCAGCGAACAAGTCGGCGCTTGAATT...CAAGGAGACAGAATAATAATGGGAATCTCGGAGTTCGACACCATAGTGACGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS GCA 90 bp AAGAAAATGGGTCTCTCCTGGGATTCATGTAAAGACCAGGGAAGATaGTGTGCATTTGAGCACAAGGACTCAGGTAGAATTGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: KKMGLSWDSCKDQGR*CAFEHKDSGRIGFE
Trigger: TTCAAAGCCAATTCTACCTGAGTCCTTGTGCTCAAATGCACAGCATCTTCCCTGGTCTTTACATGAATCCCAGGAGAGACCCATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCATCATCTTGTTGCAATaGGATAGGACCCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFIILLQ*DRTPWR
Trigger: CCTCCAGGGGGTCCTATCCAATTGCAACAAGATGAT...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS GCA 90 bp GAGATAAACCATGTAAATAGCTTAGCAGTGTGTCTGGCATGTGAATaGTGGATAAAAGCTAACTATTATTGGTCACCACCACCATCATCA +
Preference number: 5 (lower is better)
Translates to: EINHVNSLAVCLACE*WIKANYYWSPPPSS
Trigger: TGATGATGGTGGTGGTGACCAATAATAGTTAGCTTTTATCCAGCATTCACATGCCAGACACACTGCTAAGCTATTTACATGGTTTATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 90 bp ATAAACCATGTAAATAGCTTAGCAGTGTGTCTGGCATGTGAATGCTaGATAAAAGCTAACTATTATTGGTCACCACCACCATCATCACTG +
Preference number: 5 (lower is better)
Translates to: INHVNSLAVCLACEC*IKANYYWSPPPSSL
Trigger: CAGTGATGATGGTGGTGGTGACCAATAATAGTTAGCTTTTATCCAGCATTCACATGCCAGACACACTGCTAAGCTATTTACATGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS-3UTR CAA 90 bp CTTAGCAGATTACCTGATGAGCACAAGGGCGATGCTAGGAAAATTCAAAAATTCAAAATTCCCCAAACTTaGTCATTTGGAGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: LSRLPDEHKGDARKIQKFKIPQT*SFGGER
Trigger: TCTCTCTCCTCCAAATGACAAAGTTTGGGGAATTTT...GAATTTTTGAATTTTCCTAGCATCGCCCTTGTGCTCATCAGGTAATCTGCTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS TCA 72 bp CAGGCACCCGGCGCTGCCCGCAGGCAGTCACCAGAGTaGCTGTGCGGCCTCGGAGCTCGAGGGCCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: QAPGAARRQSPE*LCGLGARGPGG
Trigger: ACCACCTGGCCCTCGAGCTCCGAGGCCGCACAGTCACTCTGGTGACTGCCTGCGGGCAGCGCCGGGTGCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 72 bp CGGAGCTCGAGGGCCAGGTGGTGCCAGCGCCCGTCGTaGATGTCGAGGTCGAAGGCCACTGAGCGCCGGGAC +
Preference number: 6 (lower is better)
Translates to: RSSRARWCQRPS*MSRSKATERRD
Trigger: GTCCCGGCGCTCAGTGGCCTTCGACCTCGACATGCACGACGGGCGCTGGCACCACCTGGCCCTCGAGCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS TCA 72 bp CCAGCGCCCGTCGTGCATGTCGAGGTCGAAGGCCACTaGGCGCCGGGACCCGAGGTGGACGACCGTCTTGCC +
Preference number: 6 (lower is better)
Translates to: PAPVVHVEVEGH*APGPEVDDRLA
Trigger: GGCAAGACGGTCGTCCACCTCGGGTCCCGGCGCTCAGTGGCCTTCGACCTCGACATGCACGACGGGCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 72 bp GTGACTGTGCGGCCTCGGAGCTCGAGGGCCAGGTGGTaGCAGCGCCCGTCGTGCATGTCGAGGTCGAAGGCC +
Preference number: 6 (lower is better)
Translates to: VTVRPRSSRARW*QRPSCMSRSKA
Trigger: GGCCTTCGACCTCGACATGCACGACGGGCGCTGGCACCACCTGGCCCTCGAGCTCCGAGGCCGCACAGTCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp TCGAGGTCGAAGGCCACTGAGCGCCGGGACCCGAGGTaGACGACCGTCTTGCCGGGGAGGAACTGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: SRSKATERRDPR*TTVLPGRNCRP
Trigger: GGGCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACCTCGGGTCCCGGCGCTCAGTGGCCTTCGACCTCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp GGGGCCCAAGACGGAGGCCAGGGACTGGCCTGGAGATaGGTCTGGAGAGTCAGAGGGAGGTGCCCGCCTGCC +
Preference number: 6 (lower is better)
Translates to: GAQDGGQGLAWR*VWRVRGRCPPA
Trigger: GGCAGGCGGGCACCTCCCTCTGACTCTCCAGACCCATCTCCAGGCCAGTCCCTGGCCTCCGTCTTGGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp GGGCGAGAGGGCATGGCCCTTAGGAACCTGGGCTGGGGAGCTGACTaGCACAGGGTGACCGGCCAGCCTCGGGGAAAGCCCACCTGTGGG +
Preference number: 6 (lower is better)
Translates to: GREGMALRNLGWGAD*HRVTGQPRGKPTCG
Trigger: CCCACAGGTGGGCTTTCCCCGAGGCTGGCCGGTCACCCTGTGCAAGTCAGCTCCCCAGCCCAGGTTCCTAAGGGCCATGCCCTCTCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp CCCAAGGCGGCAGGAATGACGGTGCCCGTGGGAGCCTaGAGCCGGGCCCGCTGCGTAAAGATGAAGCCCGAC +
Preference number: 6 (lower is better)
Translates to: PKAAGMTVPVGA*SRARCVKMKPD
Trigger: GTCGGGCTTCATCTTTACGCAGCGGGCCCGGCTCCAGGCTCCCACGGGCACCGTCATTCCTGCCGCCTTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp GTAGCCCAGGGGGACCCGGCAAGCCACAGTCTCCCTTaGGTCCCGGAGGCCCCATCAGCAGAGGGAAAGGCG +
Preference number: 6 (lower is better)
Translates to: VAQGDPASHSLP*VPEAPSAEGKA
Trigger: CGCCTTTCCCTCTGCTGATGGGGCCTCCGGGACCCAAGGGAGACTGTGGCTTGCCGGGTCCCCCTGGGCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CAA 90 bp AGGTCGAAGGCCACTGAGCGCCGGGACCCGAGGTGGACGACCGTCTaGCCGGGGAGGAACTGCAGGCCCAGCTGCAGCTTGCGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: RSKATERRDPRWTTV*PGRNCRPSCSLRFW
Trigger: CCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACCTCGGGTCCCGGCGCTCAGTGGCCTTCGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 72 bp GACCCGAGGTGGACGACCGTCTTGCCGGGGAGGAACTaGAGGCCCAGCTGCAGCTTGCGTTTCTGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: DPRWTTVLPGRN*RPSCSLRFWLR
Trigger: CCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCACCTCGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp AGAGTGACTGTGCGGCCTCGGAGCTCGAGGGCCAGGTaGTGCCAGCGCCCGTCGTGCATGTCGAGGTCGAAG +
Preference number: 6 (lower is better)
Translates to: RVTVRPRSSRAR*CQRPSCMSRSK
Trigger: CTTCGACCTCGACATGCACGACGGGCGCTGGCACCACCTGGCCCTCGAGCTCCGAGGCCGCACAGTCACTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CAA 72 bp GGCATGGCCCTTAGGAACCTGGGCTGGGGAGCTGACTaGCACAGGGTGACCGGCCAGCCTCGGGGAAAGCCC +
Preference number: 6 (lower is better)
Translates to: GMALRNLGWGAD*HRVTGQPRGKP
Trigger: GGGCTTTCCCCGAGGCTGGCCGGTCACCCTGTGCAAGTCAGCTCCCCAGCCCAGGTTCCTAAGGGCCATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS TCA 72 bp CAGAGCAGGTGTGGAGTGCAGCACGGGCATGGCTGCTaGGGGGCGGCGTCCATCAGGAAGGGATGGGCGAGA +
Preference number: 6 (lower is better)
Translates to: QSRCGVQHGHGC*GAASIRKGWAR
Trigger: TCTCGCCCATCCCTTCCTGATGGACGCCGCCCCTCAGCAGCCATGCCCGTGCTGCACTCCACACCTGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 72 bp GATGAAGCCCGACTGGAAAGGAATGACTCCCGGGGGTaGAGGGCTCCCGGCCTTCGTCCAGCTGAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: DEARLERNDSRG*RAPGLRPAEAQ
Trigger: CTGGGCCTCAGCTGGACGAAGGCCGGGAGCCCTGCACCCCCGGGAGTCATTCCTTTCCAGTCGGGCTTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS GCA 72 bp CTCAGGTCCTGGCTGCCCCTGTTCTCCGGGGTGCCCTaGCGGTCCAGGATAGCCCTTGTGTCCCTTTCGTCC +
Preference number: 6 (lower is better)
Translates to: LRSWLPLFSGVP*RSRIALVSLSS
Trigger: GGACGAAAGGGACACAAGGGCTATCCTGGACCGGCAGGGCACCCCGGAGAACAGGGGCAGCCAGGACCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS CCA 72 bp GGGCTCCCGGCCTTCGTCCAGCTGAGGCCCAGCCGCTaGAGGATGTCCACATCTTCAGGAGCTCCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: GLPAFVQLRPSR*RMSTSSGAPWV
Trigger: CACCCAAGGAGCTCCTGAAGATGTGGACATCCTCCAGCGGCTGGGCCTCAGCTGGACGAAGGCCGGGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS CCA 72 bp TGGAGCCGGGCCCGCTGCGTAAAGATGAAGCCCGACTaGAAAGGAATGACTCCCGGGGGTGCAGGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: WSRARCVKMKPD*KGMTPGGAGLP
Trigger: CGGGAGCCCTGCACCCCCGGGAGTCATTCCTTTCCAGTCGGGCTTCATCTTTACGCAGCGGGCCCGGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp AGCCGCTTGTGCAGAGGAGGCAAGGGCAGCTCGGGATaGGGCCGTGGCTTGCCCCAGCTCACAGACCAAGTC +
Preference number: 6 (lower is better)
Translates to: SRLCRGGKGSSG*GRGLPQLTDQV
Trigger: GACTTGGTCTGTGAGCTGGGGCAAGCCACGGCCCCATCCCGAGCTGCCCTTGCCTCCTCTGCACAAGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CAA 72 bp ATCAAGCCAGGTGGCCCCCGAGGGCCCTGGATGCCTTaGAAGCCAATGTCTCCAGGCGGGCCCTGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: IKPGGPRGPWMP*KPMSPGGPCGR
Trigger: CCTCCCACAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCCACCTGGCTTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS TCA 72 bp TCCAGGATGGGGCGTGGGCTGTCACCCTCATCACCGTaGGCAGAGCAGGTGTGGAGTGCAGCACGGGCATGG +
Preference number: 6 (lower is better)
Translates to: SRMGRGLSPSSP*AEQVWSAARAW
Trigger: CCATGCCCGTGCTGCACTCCACACCTGCTCTGCTCACGGTGATGAGGGTGACAGCCCACGCCCCATCCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 72 bp ACGACCGTCTTGCCGGGGAGGAACTGCAGGCCCAGCTaGAGCTTGCGTTTCTGGCTGCGGACAGCGAAGAGG +
Preference number: 6 (lower is better)
Translates to: TTVLPGRNCRPS*SLRFWLRTAKR
Trigger: CCTCTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAAGACGGTCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 72 bp GAGTGGGGACGGCAGGTGCTGTTCTGGGAGTGCTGGTaGCCGAAGTTGGAGGTACCATCGTGGCTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: EWGRQVLFWECW*PKLEVPSWLVA
Trigger: GGCCACCAGCCACGATGGTACCTCCAACTTCGGGCACCAGCACTCCCAGAACAGCACCTGCCGTCCCCACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS GCA 72 bp GAGGAGGCAAGGGCAGCTCGGGATGGGGCCGTGGCTTaGCCCAGCTCACAGACCAAGTCTGAGGCAGAACTG +
Preference number: 6 (lower is better)
Translates to: EEARAARDGAVA*PSSQTKSEAEL
Trigger: CAGTTCTGCCTCAGACTTGGTCTGTGAGCTGGGGCAAGCCACGGCCCCATCCCGAGCTGCCCTTGCCTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS GCA 72 bp CCCTTGTTCACCCTTTCAGTCCGGGCTCCCCCACGCTaGCCATCAGTCCCTTCATGCCCTTGGGTCCCGGGT +
Preference number: 6 (lower is better)
Translates to: PLFTLSVRAPPR*PSVPSCPWVPG
Trigger: ACCCGGGACCCAAGGGCATGAAGGGACTGATGGGCAGCGTGGGGGAGCCCGGACTGAAAGGGTGAACAAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494090.6
CDS GCA 72 bp TCACCCTCGGACCTTGCAATCCCCAGTCCCCACGGCTaGCTTTGTCACCCTTCGGACCCGGGAGTCCCGAAG +
Preference number: 6 (lower is better)
Translates to: SPSDLAIPSPHG*LCHPSDPGVPK
Trigger: CTTCGGGACTCCCGGGTCCGAAGGGTGACAAAGGCAGCCGTGGGGACTGGGGATTGCAAGGTCCGAGGGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS CCA 72 bp GGAAGATCGAATAGCCACTGCTCGTGGGCCGGGGGCTaGAGGACAGGAATTGCGCCGGGGCCAATACCAGGG +
Preference number: 6 (lower is better)
Translates to: GRSNSHCSWAGG*RTGIAPGPIPG
Trigger: CCCTGGTATTGGCCCCGGCGCAATTCCTGTCCTCCAGCCCCCGGCCCACGAGCAGTGGCTATTCGATCTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 72 bp AGGAACGCCAGGCAGGCCTCGTTCTCCATCAGACCCTaGCAGGCCGAAGAGCCCTGGGAGCCCAATGTAGCC +
Preference number: 6 (lower is better)
Translates to: RNARQASFSIRP*QAEEPWEPNVA
Trigger: GGCTACATTGGGCTCCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACGAGGCCTGCCTGGCGTTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CAA 72 bp CGCCATATGCTGGTGAGGGTTTGTGGGGCTAGTCCTTaGGGGCTTGGTGGGCGTGGCGGGTGCCACAGTCCC +
Preference number: 6 (lower is better)
Translates to: RHMLVRVCGASP*GLGGRGGCHSP
Trigger: GGGACTGTGGCACCCGCCACGCCCACCAAGCCCCAAAGGACTAGCCCCACAAACCCTCACCAGCATATGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 72 bp ATGGTTCACCCGGTGGGAGCAGAGGCTCAGCACCAGTaGCAGCTCTGTGCCCAAGGCGGCAGGAATGACGGT +
Preference number: 6 (lower is better)
Translates to: MVHPVGAEAQHQ*QLCAQGGRNDG
Trigger: ACCGTCATTCCTGCCGCCTTGGGCACAGAGCTGGCACTGGTGCTGAGCCTCTGCTCCCACCGGGTGAACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 72 bp CACCCTTATCACCTTTCAGTCCGGGCTCCCCCACGCTaGCCATCAGTCCCTTCATGCCCTTGGGTCCCGGGT +
Preference number: 6 (lower is better)
Translates to: HPYHLSVRAPPR*PSVPSCPWVPG
Trigger: ACCCGGGACCCAAGGGCATGAAGGGACTGATGGGCAGCGTGGGGGAGCCCGGACTGAAAGGTGATAAGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS GCA 72 bp GAGTGGAACAACCAGCCATCTAGTCCCAGCCGCTTGTaGAGAGGAGGCAAGGGCAGCTCGGGATGGGGCCGT +
Preference number: 6 (lower is better)
Translates to: EWNNQPSSPSRL*RGGKGSSGWGR
Trigger: ACGGCCCCATCCCGAGCTGCCCTTGCCTCCTCTGCACAAGCGGCTGGGACTAGATGGCTGGTTGTTCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 72 bp CTGCGGACAGCGAAGAGGAAGGCATGGTTCACCCGGTaGGAGCAGAGGCTCAGCACCAGTGCCAGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: LRTAKRKAWFTR*EQRLSTSASSV
Trigger: CACAGAGCTGGCACTGGTGCTGAGCCTCTGCTCCCACCGGGTGAACCATGCCTTCCTCTTCGCTGTCCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp TTTCTGTCCTTTGGCTCCAGGAGGGCCGGGGAGACCTaGATTTCCATAAGGCCCAGGAGGACCCCGAGGCCC +
Preference number: 6 (lower is better)
Translates to: FLSFGSRRAGET*ISIRPRRTPRP
Trigger: GGGCCTCGGGGTCCTCCTGGGCCTTATGGAAATCCAGGTCTCCCCGGCCCTCCTGGAGCCAAAGGACAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS CAA 90 bp TGGACGACCGTCTTGCCGGGGAGGAACTGCAGGCCCAGCTGCAGCTaGCGTTTCTGGCTGCGGACAGCGAAGAGGAAGGCATGGTTCACC +
Preference number: 6 (lower is better)
Translates to: WTTVLPGRNCRPSCS*RFWLRTAKRKAWFT
Trigger: GGTGAACCATGCCTTCCTCTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCCTCCCCGGCAAGACGGTCGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CAA 90 bp TCCTTTCCCATCAAGCCAGGTGGCCCCCGAGGGCCCTGGATGCCTTaGAAGCCAATGTCTCCAGGCGGGCCCTGTGGGAGGCAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: SFPIKPGGPRGPWMP*KPMSPGGPCGRQRK
Trigger: CTTTCTCTGCCTCCCACAGGGCCCGCCTGGAGACATTGGCTTCAAAGGCATCCAGGGCCCTCGGGGGCCACCTGGCTTGATGGGAAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS CAA 90 bp ACAGAGGCTGGGAGCATGGGATCAAGTGCGTTACTGGCTGACAGCTaGGCAGGTAGCAGCGGGGTTTGGGCTGGGCCTCCCACCGCCATA +
Preference number: 6 (lower is better)
Translates to: TEAGSMGSSALLADS*AGSSGVWAGPPTAI
Trigger: TATGGCGGTGGGAGGCCCAGCCCAAACCCCGCTGCTACCTGCCAAGCTGTCAGCCAGTAACGCACTTGATCCCATGCTCCCAGCCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CAA 90 bp GCTGCCTTCCCAGGTCTGAGGGGGACAGGCTTCCGGGGGCTGCTCTaGGGTCCGGCTTTCTTTGAGGCTTCCGATCCAATGGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: AAFPGLRGTGFRGLL*GPAFFEASDPMGFL
Trigger: CAAGAAGCCCATTGGATCGGAAGCCTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGAAGCCTGTCCCCCTCAGACCTGGGAAGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS GCA 72 bp GGAACTGCAGGCCCAGCTGCAGCTTGCGTTTCTGGCTaGGGACAGCGAAGAGGAAGGCATGGTTCACCCGGT +
Preference number: 6 (lower is better)
Translates to: GTAGPAAACVSG*GQRRGRHGSPG
Trigger: ACCGGGTGAACCATGCCTTCCTCTTCGCTGTCCGCAGCCAGAAACGCAAGCTGCAGCTGGGCCTGCAGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS GCA 72 bp CCCCAAAGACTCCAGGAAACCCCGGCATACCCATCTTaGCCCTCTTGCCAGGAACGCCAGGCAGGCCTCGTT +
Preference number: 6 (lower is better)
Translates to: PQRLQETPAYPS*PSCQERQAGLV
Trigger: AACGAGGCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGGGTTTCCTGGAGTCTTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS CCA 72 bp GCTGGTGCCCGAAGTTGGAGGTACCATCGTGGCTGGTaGCCGAGTACTCCTGGTAGAACCAGGAGTAGGGGC +
Preference number: 6 (lower is better)
Translates to: AGARSWRYHRGW*PSTPGRTRSRG
Trigger: GCCCCTACTCCTGGTTCTACCAGGAGTACTCGGCCACCAGCCACGATGGTACCTCCAACTTCGGGCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CAA 72 bp CCAGGTCTGAGGGGGACAGGCTTCCGGGGGCTGCTCTaGGGTCCGGCTTTCTTTGAGGCTTCCGATCCAATG +
Preference number: 6 (lower is better)
Translates to: PGLRGTGFRGLL*GPAFFEASDPM
Trigger: CATTGGATCGGAAGCCTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGAAGCCTGTCCCCCTCAGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CAA 90 bp AGGCACTGGCAAAGGGTGTGGAGCAGCTGTCAAATGCTCCGGGTCTaGGGACTCGGCTGTACGCTTGGATGCAGCAGGGTTGGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: RHWQRVWSSCQMLRV*GLGCTLGCSRVGGE
Trigger: CTCTCCCCCAACCCTGCTGCATCCAAGCGTACAGCCGAGTCCCAAGACCCGGAGCATTTGACAGCTGCTCCACACCCTTTGCCAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp TTGCGTTTCTGGCTGCGGACAGCGAAGAGGAAGGCATaGTTCACCCGGTGGGAGCAGAGGCTCAGCACCAGT +
Preference number: 6 (lower is better)
Translates to: LRFWLRTAKRKA*FTRWEQRLSTS
Trigger: ACTGGTGCTGAGCCTCTGCTCCCACCGGGTGAACCATGCCTTCCTCTTCGCTGTCCGCAGCCAGAAACGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp TGCTGGTGCGGGCAGAGGCCGGCTTACTGGCATGGCTaGTTATCTTGGCCTCAGTCCGAGCTAGTGTGGGAA +
Preference number: 6 (lower is better)
Translates to: CWCGQRPAYWHG*LSWPQSELVWE
Trigger: TTCCCACACTAGCTCGGACTGAGGCCAAGATAACCAGCCATGCCAGTAAGCCGGCCTCTGCCCGCACCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 72 bp GTTTGTGGGTGCTGGTGCGGGCAGAGGCCGGCTTACTaGCATGGCTGGTTATCTTGGCCTCAGTCCGAGCTA +
Preference number: 6 (lower is better)
Translates to: VCGCWCGQRPAY*HGWLSWPQSEL
Trigger: TAGCTCGGACTGAGGCCAAGATAACCAGCCATGCCAGTAAGCCGGCCTCTGCCCGCACCAGCACCCACAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 72 bp CTCCGAGCTGAGGCGTGGGCCAATGTAGAGCAGATCTaGGCACAAAGTTGTGCCCGGATCCCTTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LRAEAWANVEQI*AQSCARIPSCW
Trigger: CCAGCAGGAAGGGATCCGGGCACAACTTTGTGCCCAGATCTGCTCTACATTGGCCCACGCCTCAGCTCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp ACTCCAGGAAACCCCGGCATACCCATCTTGCCCCTCTaGCCAGGAACGCCAGGCAGGCCTCGTTCTCCATCA +
Preference number: 6 (lower is better)
Translates to: TPGNPGIPILPL*PGTPGRPRSPS
Trigger: TGATGGAGAACGAGGCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGGGTTTCCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000494090.6
CDS CAA 72 bp TGGGGTAGAAGGACCGGCATACCCATCTTGCCCCTCTaGCCAGGAACGCCAGGCAGGCCTCGTTCTCCATCA +
Preference number: 6 (lower is better)
Translates to: WGRRTGIPILPL*PGTPGRPRSPS
Trigger: TGATGGAGAACGAGGCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGTCCTTCTACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS CAA 72 bp GTCAAATGCTCCGGGTCTTGGGACTCGGCTGTACGCTaGGATGCAGCAGGGTTGGGGGAGAGGAGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: VKCSGSWDSAVR*DAAGLGERSQA
Trigger: TGCCTGACTCCTCTCCCCCAACCCTGCTGCATCCAAGCGTACAGCCGAGTCCCAAGACCCGGAGCATTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp GGAGTAGGGGCAGGAGATGAGGATAAAGCAGTAAATGGGGGAGGTTaGTGGGTGCTGGTGCGGGCAGAGGCCGGCTTACTGGCATGGCTG +
Preference number: 6 (lower is better)
Translates to: GVGAGDEDKAVNGGG*WVLVRAEAGLLAWL
Trigger: CAGCCATGCCAGTAAGCCGGCCTCTGCCCGCACCAGCACCCACAAACCTCCCCCATTTACTGCTTTATCCTCATCTCCTGCCCCTACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CAA 90 bp TCTGAACTTTGGGGTAGAAGGACCGGCATACCCATCTTGCCCCTCTaGCCAGGAACGCCAGGCAGGCCTCGTTCTCCATCAGACCCTGGC +
Preference number: 6 (lower is better)
Translates to: SELWGRRTGIPILPL*PGTPGRPRSPSDPG
Trigger: GCCAGGGTCTGATGGAGAACGAGGCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGTCCTTCTACCCCAAAGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS GCA 72 bp CTGAACTTTGGGGTAGAAGGACCGGCATACCCATCTTaGCCCTCTTGCCAGGAACGCCAGGCAGGCCTCGTT +
Preference number: 6 (lower is better)
Translates to: LNFGVEGPAYPS*PSCQERQAGLV
Trigger: AACGAGGCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGTCCTTCTACCCCAAAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS GCA 72 bp GGTAGGAGTCAGGTCTCCCACCCCATCAGCCAGCGCTaGTGCTTACATCTAGCTTCCCCACTGGGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: GRSQVSHPISQR*CLHLASPLGFS
Trigger: TGAGAAGCCCAGTGGGGAAGCTAGATGTAAGCAGCAGCGCTGGCTGATGGGGTGGGAGACCTGACTCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS GCA 72 bp GCAGGCACTGGCAAAGGGTGTGGAGCAGCTGTCAAATaGTCCGGGTCTTGGGACTCGGCTGTACGCTTGGAT +
Preference number: 6 (lower is better)
Translates to: AGTGKGCGAAVK*SGSWDSAVRLD
Trigger: ATCCAAGCGTACAGCCGAGTCCCAAGACCCGGAGCATTTGACAGCTGCTCCACACCCTTTGCCAGTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 72 bp CCCACAGCTCCCTCACCCCTGGGGTCTGTCAACCTTTaGCCTTCTTGTCAAGAGAGGCCTTACCTGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PTAPSPLGSVNL*PSCQERPYLRG
Trigger: GCCTCTCAGGTAAGGCCTCTCTTGACAAGAAGGGCAAAGGTTGACAGACCCCAGGGGTGAGGGAGCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS CCA 72 bp CAACAGAGGCTGGGAGCATGGGATCAAGTGCGTTACTaGCTGACAGCTTGGCAGGTAGCAGCGGGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: QQRLGAWDQVRY*LTAWQVAAGFG
Trigger: CCCAAACCCCGCTGCTACCTGCCAAGCTGTCAGCCAGTAACGCACTTGATCCCATGCTCCCAGCCTCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp AGTGCTGGTGCCCGAAGTTGGAGGTACCATCGTGGCTaGTGGCCGAGTACTCCTGGTAGAACCAGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: SAGARSWRYHRG*WPSTPGRTRSR
Trigger: CCTACTCCTGGTTCTACCAGGAGTACTCGGCCACCAGCCACGATGGTACCTCCAACTTCGGGCACCAGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 72 bp AGGTTCAGAGAAGGGGTCTGCTTCTCTGAGGTCACCTaGAGAGTAGGTGGGCGAGAGGGCATGGCCCTTAGG +
Preference number: 6 (lower is better)
Translates to: RFREGVCFSEVT*RVGGREGMALR
Trigger: CCTAAGGGCCATGCCCTCTCGCCCACCTACTCTCCAGGTGACCTCAGAGAAGCAGACCCCTTCTCTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp CAGGCTTCCGGGGGCTGCTCTTGGGTCCGGCTTTCTTaGAGGCTTCCGATCCAATGGGCTTCTTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: QASGGCSWVRLS*RLPIQWASCFQ
Trigger: CTGGAAGCAAGAAGCCCATTGGATCGGAAGCCTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGAAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CAA 72 bp TCTGAACTTTGGGGTAGAAGGACCGGCATACCCATCTaGCCCCTCTTGCCAGGAACGCCAGGCAGGCCTCGT +
Preference number: 6 (lower is better)
Translates to: SELWGRRTGIPI*PLLPGTPGRPR
Trigger: ACGAGGCCTGCCTGGCGTTCCTGGCAAGAGGGGCAAGATGGGTATGCCGGTCCTTCTACCCCAAAGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS TCA 72 bp AGGCTTCCGGGGGCTGCTCTTGGGTCCGGCTTTCTTTaGGGCTTCCGATCCAATGGGCTTCTTGCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: RLPGAALGSGFL*GFRSNGLLASS
Trigger: ACTGGAAGCAAGAAGCCCATTGGATCGGAAGCCTCAAAGAAAGCCGGACCCAAGAGCAGCCCCCGGAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS GCA 72 bp CCTTGGTTCTGTAGATGGACCCTGCATCTTGTGACCTaGCGAGCCCCAGGTGAGCATGAAGTCAGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: PWFCRWTLHLVT*RAPGEHEVRVG
Trigger: ACCCACCCTGACTTCATGCTCACCTGGGGCTCGGCAGGTCACAAGATGCAGGGTCCATCTACAGAACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS GCA 72 bp TCTGGAGAGTCAGAGGGAGGTGCCCGCCTGCCCACCTaGAATTCAGGTGAGCTAAGGTGTCTCTTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: SGESEGGARLPT*NSGELRCLFRV
Trigger: GACTCTGAAGAGACACCTTAGCTCACCTGAATTGCAGGTGGGCAGGCGGGCACCTCCCTCTGACTCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 72 bp CAGATCTGGGCACAAAGTTGTGCCCGGATCCCTTCCTaGTGGGAGCCTCAGCTTCTAAGCACAGCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: QIWAQSCARIPS*WEPQLLSTAWH
Trigger: ATGCCAGGCTGTGCTTAGAAGCTGAGGCTCCCAGCAGGAAGGGATCCGGGCACAACTTTGTGCCCAGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp GGAGATGAGGATAAAGCAGTAAATGGGGGAGGTTTGTaGGTGCTGGTGCGGGCAGAGGCCGGCTTACTGGCA +
Preference number: 6 (lower is better)
Translates to: GDEDKAVNGGGL*VLVRAEAGLLA
Trigger: TGCCAGTAAGCCGGCCTCTGCCCGCACCAGCACCCACAAACCTCCCCCATTTACTGCTTTATCCTCATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 72 bp GAGATGGAAGGAAACCTTCTGGGCAGAGCTCACAACTaGCAGAGCCCCCAGAGGAGGGGTCACATGGCTAAG +
Preference number: 6 (lower is better)
Translates to: EMEGNLLGRAHN*QSPQRRGHMAK
Trigger: CTTAGCCATGTGACCCCTCCTCTGGGGGCTCTGCCAGTTGTGAGCTCTGCCCAGAAGGTTTCCTTCCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 72 bp AAAGGGTGTGGAGCAGCTGTCAAATGCTCCGGGTCTTaGGACTCGGCTGTACGCTTGGATGCAGCAGGGTTG +
Preference number: 6 (lower is better)
Translates to: KGCGAAVKCSGS*DSAVRLDAAGL
Trigger: CAACCCTGCTGCATCCAAGCGTACAGCCGAGTCCCAAGACCCGGAGCATTTGACAGCTGCTCCACACCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp ATCACCACCCAGTGTAGCAGGCACTGGCAAAGGGTGTaGAGCAGCTGTCAAATGCTCCGGGTCTTGGGACTC +
Preference number: 6 (lower is better)
Translates to: ITTQCSRHWQRV*SSCQMLRVLGL
Trigger: GAGTCCCAAGACCCGGAGCATTTGACAGCTGCTCCACACCCTTTGCCAGTGCCTGCTACACTGGGTGGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp CTCTGGCTCTGGGATTCCATTTCTGGCTTGTCGTCCTaGCCACCTGTTCTCCTCTCAGAGGCAGACAGCCTG +
Preference number: 6 (lower is better)
Translates to: LWLWDSISGLSS*PPVLLSEADSL
Trigger: CAGGCTGTCTGCCTCTGAGAGGAGAACAGGTGGCCAGGACGACAAGCCAGAAATGGAATCCCAGAGCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp CGGGCAGAGGCCGGCTTACTGGCATGGCTGGTTATCTaGGCCTCAGTCCGAGCTAGTGTGGGAATGGGTTTT +
Preference number: 6 (lower is better)
Translates to: RAEAGLLAWLVI*ASVRASVGMGF
Trigger: AAAACCCATTCCCACACTAGCTCGGACTGAGGCCAAGATAACCAGCCATGCCAGTAAGCCGGCCTCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CAA 72 bp AGCCATGGCGTCCAGCCAGGGCACCTTCTGAAGGCATaGAGTTCCCACCTCTGGCCTCTGAACTTTGGGGTA +
Preference number: 6 (lower is better)
Translates to: SHGVQPGHLLKA*SSHLWPLNFGV
Trigger: TACCCCAAAGTTCAGAGGCCAGAGGTGGGAACTCAATGCCTTCAGAAGGTGCCCTGGCTGGACGCCATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451716.5
CDS CAA 72 bp CCAAACGGGCCCAGATTTGGGTCCTGGATGTGCCAGTaGCTAGCGGTGTGTCCTTGGGCAAGTTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: PNGPRFGSWMCQ*LAVCPWASCFT
Trigger: GGTGAAGCAACTTGCCCAAGGACACACCGCTAGCAACTGGCACATCCAGGACCCAAATCTGGGCCCGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp CAAAGGGTGTGGAGCAGCTGTCAAATGCTCCGGGTCTaGGGACTCGGCTGTACGCTTGGATGCAGCAGGGTT +
Preference number: 6 (lower is better)
Translates to: QRVWSSCQMLRV*GLGCTLGCSRV
Trigger: AACCCTGCTGCATCCAAGCGTACAGCCGAGTCCCAAGACCCGGAGCATTTGACAGCTGCTCCACACCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp GCTTTGGAGCCAAACGGGCCCAGATTTGGGTCCTGGATGTGCCAGTaGCTAGCGGTGTGTCCTTGGGCAAGTTGCTTCACCACTCTGAGT +
Preference number: 6 (lower is better)
Translates to: ALEPNGPRFGSWMCQ*LAVCPWASCFTTLS
Trigger: ACTCAGAGTGGTGAAGCAACTTGCCCAAGGACACACCGCTAGCAACTGGCACATCCAGGACCCAAATCTGGGCCCGTTTGGCTCCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS TCA 72 bp CCATTCCTTGGTTCTGTAGATGGACCCTGCATCTTGTaGCCTGCCGAGCCCCAGGTGAGCATGAAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: PFLGSVDGPCIL*PAEPQVSMKSG
Trigger: CCCTGACTTCATGCTCACCTGGGGCTCGGCAGGTCACAAGATGCAGGGTCCATCTACAGAACCAAGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 72 bp GTCAAGTTCTCCAGGCCTAGCAGGGCGAGGTCGGACTaGAAGGTAAAAGGTCTGCCAGAGTCTTGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: VKFSRPSRARSD*KVKGLPESWEK
Trigger: CTTCTCCCAAGACTCTGGCAGACCTTTTACCTTCCAGTCCGACCTCGCCCTGCTAGGCCTGGAGAACTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp GGGCAGAGGCCGGCTTACTGGCATGGCTGGTTATCTTaGCCTCAGTCCGAGCTAGTGTGGGAATGGGTTTTT +
Preference number: 6 (lower is better)
Translates to: GQRPAYWHGWLS*PQSELVWEWVF
Trigger: AAAAACCCATTCCCACACTAGCTCGGACTGAGGCCAAGATAACCAGCCATGCCAGTAAGCCGGCCTCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356083.8
ENST00000451716.5
ENST00000494090.6
CDS CCA 72 bp GGTTTGGATCCACCCAGTAGGTACCTGCAGGCAGCGTaGGATGGAGGTGATGTATGTATCTGGGGGATGAGC +
Preference number: 6 (lower is better)
Translates to: GLDPPSRYLQAA*DGGDVCIWGMS
Trigger: GCTCATCCCCCAGATACATACATCACCTCCATCCCACGCTGCCTGCAGGTACCTACTGGGTGGATCCAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 72 bp ACCTTCATCAGCATCACCACCCAGTGTAGCAGGCACTaGCAAAGGGTGTGGAGCAGCTGTCAAATGCTCCGG +
Preference number: 6 (lower is better)
Translates to: TFISITTQCSRH*QRVWSSCQMLR
Trigger: CCGGAGCATTTGACAGCTGCTCCACACCCTTTGCCAGTGCCTGCTACACTGGGTGGTGATGCTGATGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp CTCCTGCAGACTCCTCTGGCTCTGGGATTCCATTTCTaGCTTGTCGTCCTGGCCACCTGTTCTCCTCTCAGA +
Preference number: 6 (lower is better)
Translates to: LLQTPLALGFHF*LVVLATCSPLR
Trigger: TCTGAGAGGAGAACAGGTGGCCAGGACGACAAGCCAGAAATGGAATCCCAGAGCCAGAGGAGTCTGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp AAAGATCTCTCCTCCCTGGTCCAGCACCAGCCGGTCTaGATAGCTGTAACTCTGTCACGAGGAGAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: KDLSSLVQHQPV*IAVTLSRGEGG
Trigger: ACCACCCTCTCCTCGTGACAGAGTTACAGCTATCCAGACCGGCTGGTGCTGGACCAGGGAGGAGAGATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS CAA 72 bp TCAGGGAGCAGCAGGGTCAAGTTGGGCCAGCAGGCTTaGGCACCTGTGAGCCGTGGGTTTGAATTTTGGATC +
Preference number: 6 (lower is better)
Translates to: SGSSRVKLGQQA*APVSRGFEFWI
Trigger: GATCCAAAATTCAAACCCACGGCTCACAGGTGCCAAAGCCTGCTGGCCCAACTTGACCCTGCTGCTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp TGCAGACTCCTCTGGCTCTGGGATTCCATTTCTGGCTaGTCGTCCTGGCCACCTGTTCTCCTCTCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: CRLLWLWDSISG*SSWPPVLLSEA
Trigger: TGCCTCTGAGAGGAGAACAGGTGGCCAGGACGACAAGCCAGAAATGGAATCCCAGAGCCAGAGGAGTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp AAGGAAGAAGAAGCAAGAAAAAGAGAGAGAGAGATGATCAAACTTTaGGAGGCGGGCTGCTGGCGGTCCCCGGAGGCAGAGCAAGGCCGG +
Preference number: 6 (lower is better)
Translates to: KEEEARKREREMIKL*EAGCWRSPEAEQGR
Trigger: CCGGCCTTGCTCTGCCTCCGGGGACCGCCAGCAGCCCGCCTCCAAAAGTTTGATCATCTCTCTCTCTCTTTTTCTTGCTTCTTCTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS CAA 90 bp AGGAGTCTCTCAGGGAGCAGCAGGGTCAAGTTGGGCCAGCAGGCTTaGGCACCTGTGAGCCGTGGGTTTGAATTTTGGATCCTCACTCAT +
Preference number: 6 (lower is better)
Translates to: RSLSGSSRVKLGQQA*APVSRGFEFWILTH
Trigger: ATGAGTGAGGATCCAAAATTCAAACCCACGGCTCACAGGTGCCAAAGCCTGCTGGCCCAACTTGACCCTGCTGCTCCCTGAGAGACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS TCA 72 bp GGGTCACTTGCACAAGGGTTTGGGGGATCACCTAGTTaGATGGATTCTTCGAGGCCTAGGGCTCCTCCTAGG +
Preference number: 6 (lower is better)
Translates to: GSLAQGFGGSPS*MDSSRPRAPPR
Trigger: CCTAGGAGGAGCCCTAGGCCTCGAAGAATCCATTCAACTAGGTGATCCCCCAAACCCTTGTGCAAGTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS GCA 72 bp CTGAACTGGCAGAGAGCACCTTCAAACTGGACTGCATaGGGGTTCATCTTCCCAAAGAGGAAGGAGCCCCCA +
Preference number: 6 (lower is better)
Translates to: LNWQRAPSNWTA*GFIFPKRKEPP
Trigger: TGGGGGCTCCTTCCTCTTTGGGAAGATGAACCCGCATGCAGTCCAGTTTGAAGGTGCTCTCTGCCAGTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS CCA 72 bp CACTTGCACAAGGGTTTGGGGGATCACCTAGTTGAATaGATTCTTCGAGGCCTAGGGCTCCTCCTAGGGCCT +
Preference number: 6 (lower is better)
Translates to: HLHKGLGDHLVE*ILRGLGLLLGP
Trigger: AGGCCCTAGGAGGAGCCCTAGGCCTCGAAGAATCCATTCAACTAGGTGATCCCCCAAACCCTTGTGCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 72 bp GGGTCCTGGATGTGCCAGTTGCTAGCGGTGTGTCCTTaGGCAAGTTGCTTCACCACTCTGAGTCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: GSWMCQLLAVCP*ASCFTTLSLSF
Trigger: GAAACTGAGACTCAGAGTGGTGAAGCAACTTGCCCAAGGACACACCGCTAGCAACTGGCACATCCAGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp ATAGCTGTAACTCTGTCACGAGGAGAGGGTGGTCATTaGGACCTTAGGGTCCTGGTCCAGCCTGGGGTTCAA +
Preference number: 6 (lower is better)
Translates to: IAVTLSRGEGGH*DLRVLVQPGVQ
Trigger: TTGAACCCCAGGCTGGACCAGGACCCTAAGGTCCCAATGACCACCCTCTCCTCGTGACAGAGTTACAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS CCA 72 bp ACCTACCTCTGGAGTTGTTCTGAGAATTACACGAGGTaGTGCATGGAGGGTGCTGGGCAAAGGGCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: TYLWSCSENYTR*CMEGAGQRAWH
Trigger: GTGCCAAGCCCTTTGCCCAGCACCCTCCATGCACCACCTCGTGTAATTCTCAGAACAACTCCAGAGGTAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485397.1
CDS CAA 72 bp GAAGCAAGAAAAAGAGAGAGAGAGATGATCAAACTTTaGGAGGCGGGCTGCTGGCGGTCCCCGGAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: EARKREREMIKL*EAGCWRSPEAE
Trigger: CTCTGCCTCCGGGGACCGCCAGCAGCCCGCCTCCAAAAGTTTGATCATCTCTCTCTCTCTTTTTCTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS TCA 72 bp TCCACATCTTCAGGAGCTCCTTGGGTGGAGGCCAGGTaGCAGGCAAACGAGACTAAGATCCAGGAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: STSSGAPWVEAR*QANETKIQEKR
Trigger: TCTCTTCTCCTGGATCTTAGTCTCGTTTGCCTGTCACCTGGCCTCCACCCAAGGAGCTCCTGAAGATGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356083.8
CDS TCA 72 bp AGGGGTAGAGGACTGAACCTACCTCTGGAGTTGTTCTaGGAATTACACGAGGTGGTGCATGGAGGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: RGRGLNLPLELF*ELHEVVHGGCW
Trigger: CCAGCACCCTCCATGCACCACCTCGTGTAATTCTCAGAACAACTCCAGAGGTAGGTTCAGTCCTCTACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485397.1
CDS GCA 72 bp AGCCCTTTGGGTGGGTGGCACTGGGCACATGGCAAGTaGCCAAAGCATTTTAGCCATGACCTTCATCAGCAT +
Preference number: 6 (lower is better)
Translates to: SPLGGWHWAHGK*PKHFSHDLHQH
Trigger: ATGCTGATGAAGGTCATGGCTAAAATGCTTTGGGCACTTGCCATGTGCCCAGTGCCACCCACCCAAAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp GCTTCTCAGGAAGCCAAAACCTTTGCAGCTCAAGAGTaGAACAACCAGCCATCTAGTCCCAGCCGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: ASQEAKTFAAQE*NNQPSSPSRLC
Trigger: GCACAAGCGGCTGGGACTAGATGGCTGGTTGTTCCACTCTTGAGCTGCAAAGGTTTTGGCTTCCTGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 72 bp CTCACAACTGGCAGAGCCCCCAGAGGAGGGGTCACATaGCTAAGTACTTGCCTATGTTGCTACTGGGATGTA +
Preference number: 6 (lower is better)
Translates to: LTTGRAPRGGVT*LSTCLCCYWDV
Trigger: TACATCCCAGTAGCAACATAGGCAAGTACTTAGCCATGTGACCCCTCCTCTGGGGGCTCTGCCAGTTGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 72 bp CTGCAGGCAGCGTGGGATGGAGGTGATGTATGTATCTaGGGGATGAGCCCATTCCTTGGTTCTGTAGATGGA +
Preference number: 6 (lower is better)
Translates to: LQAAWDGGDVCI*GMSPFLGSVDG
Trigger: TCCATCTACAGAACCAAGGAATGGGCTCATCCCCCAGATACATACATCACCTCCATCCCACGCTGCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CCA 72 bp CTGCTGACCCTTCCCCAAGCTGCTGTCAATGGGAGCTaGAGCTGTCATCTCAGATCTCTATGGGAACACAGT +
Preference number: 6 (lower is better)
Translates to: LLTLPQAAVNGS*SCHLRSLWEHS
Trigger: ACTGTGTTCCCATAGAGATCTGAGATGACAGCTCCAGCTCCCATTGACAGCAGCTTGGGGAAGGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp TATTTGGAAGATAACAGAGACCAAAGACTCTGGCTCTaGGCCTGGCGTAGTGCCGGTGCTCAGGAATCACCC +
Preference number: 6 (lower is better)
Translates to: YLEDNRDQRLWL*AWRSAGAQESP
Trigger: GGGTGATTCCTGAGCACCGGCACTACGCCAGGCCCAGAGCCAGAGTCTTTGGTCTCTGTTATCTTCCAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp CTGAGCCTCAGCCTCTTCGCCTTTAGAATGGGTGCATaGTACAGCAGAGTGAGCAGAGGCTTTGGAGCCAAA +
Preference number: 6 (lower is better)
Translates to: LSLSLFAFRMGA*YSRVSRGFGAK
Trigger: TTTGGCTCCAAAGCCTCTGCTCACTCTGCTGTACCATGCACCCATTCTAAAGGCGAAGAGGCTGAGGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp CCCCAGTGCCAAGGTTTACGAGGGACACTGATAAACTaGTGTGCATCCAGAGGAGAGAGAGCACAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: PQCQGLRGTLIN*CASRGERAQEA
Trigger: TGCTTCCTGTGCTCTCTCTCCTCTGGATGCACACCAGTTTATCAGTGTCCCTCGTAAACCTTGGCACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp CTTACATCTAGCTTCCCCACTGGGCTTCTCAGGAAGCCAAAACCTTaGCAGCTCAAGAGTGGAACAACCAGCCATCTAGTCCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: LTSSFPTGLLRKPKP*QLKSGTTSHLVPAA
Trigger: AGCGGCTGGGACTAGATGGCTGGTTGTTCCACTCTTGAGCTGCAAAGGTTTTGGCTTCCTGAGAAGCCCAGTGGGGAAGCTAGATGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CAA 90 bp GGTTCCACGGTCATGGCTAGAGCACGGGTTGGGTTTCTCTTTATTTaGCAGACAAGAAAACGGGCCAGGGACAAAGTGCAGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: GSTVMARARVGFLFI*QTRKRARDKVQEER
Trigger: CCTCTCCTCCTGCACTTTGTCCCTGGCCCGTTTTCTTGTCTGCAAAATAAAGAGAAACCCAACCCGTGCTCTAGCCATGACCGTGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS TCA 72 bp TCTTCGCCTTTAGAATGGGTGCATGGTACAGCAGAGTaGGCAGAGGCTTTGGAGCCAAACGGGCCCAGATTT +
Preference number: 6 (lower is better)
Translates to: SSPLEWVHGTAE*AEALEPNGPRF
Trigger: AAATCTGGGCCCGTTTGGCTCCAAAGCCTCTGCTCACTCTGCTGTACCATGCACCCATTCTAAAGGCGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 72 bp AAGAGAGGCTCAAGAAAGCAACTCATGATTGCTCATTaGTTCAAGCTGGGCCTGCTGAGGCCTGAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: KRGSRKQLMIAH*FKLGLLRPELW
Trigger: CCAGAGCTCAGGCCTCAGCAGGCCCAGCTTGAAGCAATGAGCAATCATGAGTTGCTTTCTTGAGCCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp GTGGGCGTCCTTGTGAATCTCATGCAGAACAGTCTCTaGGGGTTCCTAGAGATGCCCCAAATCCTCAGACAT +
Preference number: 6 (lower is better)
Translates to: VGVLVNLMQNSL*GFLEMPQILRH
Trigger: ATGTCTGAGGATTTGGGGCATCTCTAGGAACCCCCAGAGACTGTTCTGCATGAGATTCACAAGGACGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp CGTCCATCAGGAAGGGATGGGCGAGAAGAGCAGGCTTaGAAAAGCATAGTGTGTCTTTACCAGTTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: RPSGRDGREEQA*KSIVCLYQFCP
Trigger: GGGACAGAACTGGTAAAGACACACTATGCTTTTCCAAGCCTGCTCTTCTCGCCCATCCCTTCCTGATGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp AGCTTCCCCACTGGGCTTCTCAGGAAGCCAAAACCTTaGCAGCTCAAGAGTGGAACAACCAGCCATCTAGTC +
Preference number: 6 (lower is better)
Translates to: SFPTGLLRKPKP*QLKSGTTSHLV
Trigger: GACTAGATGGCTGGTTGTTCCACTCTTGAGCTGCAAAGGTTTTGGCTTCCTGAGAAGCCCAGTGGGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CAA 72 bp GGTGTGAGGGAGTTGCTGGGGCAGTTTCTAGTTCAGTaGGGAAGATTTTCCAATGGAGCGGTCCAGAGATGG +
Preference number: 6 (lower is better)
Translates to: GVRELLGQFLVQ*GRFSNGAVQRW
Trigger: CCATCTCTGGACCGCTCCATTGGAAAATCTTCCCAACTGAACTAGAAACTGCCCCAGCAACTCCCTCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp GAGATGCCCCAAATCCTCAGACATCTGCCAGTGCTCAGAGGAGCCTaGCAAGTCACCTTCCTTAACCCTCTTCAGTTACAGATGGGACAA +
Preference number: 6 (lower is better)
Translates to: EMPQILRHLPVLRGA*QVTFLNPLQLQMGQ
Trigger: TTGTCCCATCTGTAACTGAAGAGGGTTAAGGAAGGTGACTTGCAAGGCTCCTCTGAGCACTGGCAGATGTCTGAGGATTTGGGGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS TCA 72 bp GGGTCACCGTCCACATTCGTGAAAGGGGTAGAGGACTaGACCTACCTCTGGAGTTGTTCTGAGAATTACACG +
Preference number: 6 (lower is better)
Translates to: GSPSTFVKGVED*TYLWSCSENYT
Trigger: CGTGTAATTCTCAGAACAACTCCAGAGGTAGGTTCAGTCCTCTACCCCTTTCACGAATGTGGACGGTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485397.1
CDS CCA 72 bp CTAGAATATTTGGAAGATAACAGAGACCAAAGACTCTaGCTCTGGGCCTGGCGTAGTGCCGGTGCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: LEYLEDNRDQRL*LWAWRSAGAQE
Trigger: TTCCTGAGCACCGGCACTACGCCAGGCCCAGAGCCAGAGTCTTTGGTCTCTGTTATCTTCCAAATATTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp TCTCACAACCTGGGAGGTATCTCGGTTCCACGGTCATaGCTAGAGCACGGGTTGGGTTTCTCTTTATTTTGC +
Preference number: 6 (lower is better)
Translates to: SHNLGGISVPRS*LEHGLGFSLFC
Trigger: GCAAAATAAAGAGAAACCCAACCCGTGCTCTAGCCATGACCGTGGAACCGAGATACCTCCCAGGTTGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS CCA 72 bp CAGCAGGTACCAGCAGTGTGTTGGCTCAGTGCTGTGTaGCATATGCCCCTGGTCTTTATTTTTGCAACAGTC +
Preference number: 6 (lower is better)
Translates to: QQVPAVCWLSAV*HMPLVFIFATV
Trigger: GACTGTTGCAAAAATAAAGACCAGGGGCATATGCCACACAGCACTGAGCCAACACACTGCTGGTACCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS TCA 72 bp AGTAATTGTGAGCGACCTGCGTCACAGGGTAGATACTaGACTGGCAGAGAGCACCTTCAAACTGGACTGCAT +
Preference number: 6 (lower is better)
Translates to: SNCERPASQGRY*TGREHLQTGLH
Trigger: ATGCAGTCCAGTTTGAAGGTGCTCTCTGCCAGTTCAGTATCTACCCTGTGACGCAGGTCGCTCACAATTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356083.8
ENST00000451716.5
CDS TCA 72 bp CCTTCCTTAACCCTCTTCAGTTACAGATGGGACAACTaGAGTGCAGACAGGTGGAGACTCCCTAATACCACC +
Preference number: 6 (lower is better)
Translates to: PSLTLFSYRWDN*SADRWRLPNTT
Trigger: GGTGGTATTAGGGAGTCTCCACCTGTCTGCACTTCAGTTGTCCCATCTGTAACTGAAGAGGGTTAAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS TCA 72 bp TGCAGGAGGAGAGGCTATCACAATGGCTCAGAGGCTTaGAAAGAGCTCAGGGTCAGACCATGTTCTCTGATA +
Preference number: 6 (lower is better)
Translates to: CRRRGYHNGSEA*KELRVRPCSLI
Trigger: TATCAGAGAACATGGTCTGACCCTGAGCTCTTTTCAAGCCTCTGAGCCATTGTGATAGCCTCTCCTCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS CAA 72 bp CAAATCCTCAGACATCTGCCAGTGCTCAGAGGAGCCTaGCAAGTCACCTTCCTTAACCCTCTTCAGTTACAG +
Preference number: 6 (lower is better)
Translates to: QILRHLPVLRGA*QVTFLNPLQLQ
Trigger: CTGTAACTGAAGAGGGTTAAGGAAGGTGACTTGCAAGGCTCCTCTGAGCACTGGCAGATGTCTGAGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp GTCATGGCTAGAGCACGGGTTGGGTTTCTCTTTATTTaGCAGACAAGAAAACGGGCCAGGGACAAAGTGCAG +
Preference number: 6 (lower is better)
Translates to: VMARARVGFLFI*QTRKRARDKVQ
Trigger: CTGCACTTTGTCCCTGGCCCGTTTTCTTGTCTGCAAAATAAAGAGAAACCCAACCCGTGCTCTAGCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490831.1
CDS CAA 72 bp AACACCTACAATTATTCAGCAGGTACCAGCAGTGTGTaGGCTCAGTGCTGTGTGGCATATGCCCCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: NTYNYSAGTSSV*AQCCVAYAPGL
Trigger: AAGACCAGGGGCATATGCCACACAGCACTGAGCCAACACACTGCTGGTACCTGCTGAATAATTGTAGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS TCA 72 bp GCCGGTGCTCAGGAATCACCCTTAGCCAAGAGAAGCTaGTATTTTAAGAAGGGTAGCAGGAAAGACTGGAAG +
Preference number: 6 (lower is better)
Translates to: AGAQESPLAKRS*YFKKGSRKDWK
Trigger: CTTCCAGTCTTTCCTGCTACCCTTCTTAAAATATCAGCTTCTCTTGGCTAAGGGTGATTCCTGAGCACCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS TCA 72 bp ATAGCCATAGGTCCTGAATGTATCTATGCCTTCCTCTaGGCCTCAGCCTCTTCGCCTTTAGAATGGGTGCAT +
Preference number: 6 (lower is better)
Translates to: IAIGPECIYAFL*ASASSPLEWVH
Trigger: ATGCACCCATTCTAAAGGCGAAGAGGCTGAGGCTCAGAGGAAGGCATAGATACATTCAGGACCTATGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp GGAGTAAGAAACACCTACAATTATTCAGCAGGTACCAGCAGTGTGTaGGCTCAGTGCTGTGTGGCATATGCCCCTGGTCTTTATTTTTGC +
Preference number: 6 (lower is better)
Translates to: GVRNTYNYSAGTSSV*AQCCVAYAPGLYFC
Trigger: GCAAAAATAAAGACCAGGGGCATATGCCACACAGCACTGAGCCAACACACTGCTGGTACCTGCTGAATAATTGTAGGTGTTTCTTACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS TCA 72 bp CCACTGCACCAGGCTGGCATGGGCTTTTTATGGTTTTaGAGCAATCAGTGTCACTCTAAGCTTGCCTTATCT +
Preference number: 6 (lower is better)
Translates to: PLHQAGMGFLWF*SNQCHSKLALS
Trigger: AGATAAGGCAAGCTTAGAGTGACACTGATTGCTTCAAAACCATAAAAAGCCCATGCCAGCCTGGTGCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 72 bp GGTCTCTCCTGGGATTCATGTAAAGACCAGGGAAGATaGTGTGCATTTGAGCACAAGGACTCAGGTAGAATT +
Preference number: 6 (lower is better)
Translates to: GLSWDSCKDQGR*CAFEHKDSGRI
Trigger: AATTCTACCTGAGTCCTTGTGCTCAAATGCACAGCATCTTCCCTGGTCTTTACATGAATCCCAGGAGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 72 bp TACCAGCAGTGTGTTGGCTCAGTGCTGTGTGGCATATaGCCCTGGTCTTTATTTTTGCAACAGTCTTCTACT +
Preference number: 6 (lower is better)
Translates to: YQQCVGSVLCGI*PWSLFLQQSST
Trigger: AGTAGAAGACTGTTGCAAAAATAAAGACCAGGGGCATATGCCACACAGCACTGAGCCAACACACTGCTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS GCA 72 bp AATTATTCAGCAGGTACCAGCAGTGTGTTGGCTCAGTaGTGTGTGGCATATGCCCCTGGTCTTTATTTTTGC +
Preference number: 6 (lower is better)
Translates to: NYSAGTSSVLAQ*CVAYAPGLYFC
Trigger: GCAAAAATAAAGACCAGGGGCATATGCCACACAGCACTGAGCCAACACACTGCTGGTACCTGCTGAATAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494780.1
CDS CCA 72 bp GTTTCCTCATCTAAAGACAGAACTTCCGTTGTCCTATaGATCCAGCTGGTAAAGGGCTTAGCGTTGTACCTG +
Preference number: 6 (lower is better)
Translates to: VSSSKDRTSVVL*IQLVKGLALYL
Trigger: CAGGTACAACGCTAAGCCCTTTACCAGCTGGATCCATAGGACAACGGAAGTTCTGTCTTTAGATGAGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp TTCCTGGACAAACACCTTAAGAAAATGGGTCTCTCCTaGGATTCATGTAAAGACCAGGGAAGATGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: FLDKHLKKMGLS*DSCKDQGRCCA
Trigger: TGCACAGCATCTTCCCTGGTCTTTACATGAATCCCAGGAGAGACCCATTTTCTTAAGGTGTTTGTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp ATGAGGGGTGATTCCTGGACAAACACCTTAAGAAAATaGGTCTCTCCTGGGATTCATGTAAAGACCAGGGAA +
Preference number: 6 (lower is better)
Translates to: MRGDSWTNTLRK*VSPGIHVKTRE
Trigger: TTCCCTGGTCTTTACATGAATCCCAGGAGAGACCCATTTTCTTAAGGTGTTTGTCCAGGAATCACCCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp CAGAGGAGGGGTCACATGGCTAAGTACTTGCCTATGTaGCTACTGGGATGTATCCATTTTACAGAGAAGACA +
Preference number: 6 (lower is better)
Translates to: QRRGHMAKYLPM*LLGCIHFTEKT
Trigger: TGTCTTCTCTGTAAAATGGATACATCCCAGTAGCAACATAGGCAAGTACTTAGCCATGTGACCCCTCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468565.1
CDS CAA 90 bp GCATGGGCTTTTTATGGTTTTGAAGCAATCAGTGTCACTCTAAGCTaGCCTTATCTCATCACGGTAATCTTTGCGTACTCTGAGAGAGAT +
Preference number: 6 (lower is better)
Translates to: AWAFYGFEAISVTLS*PYLITVIFAYSERD
Trigger: ATCTCTCTCAGAGTACGCAAAGATTACCGTGATGAGATAAGGCAAGCTTAGAGTGACACTGATTGCTTCAAAACCATAAAAAGCCCATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CCA 72 bp GTAAATAGCTTAGCAGTGTGTCTGGCATGTGAATGCTaGATAAAAGCTAACTATTATTGGTCACCACCACCA +
Preference number: 6 (lower is better)
Translates to: VNSLAVCLACEC*IKANYYWSPPP
Trigger: TGGTGGTGGTGACCAATAATAGTTAGCTTTTATCCAGCATTCACATGCCAGACACACTGCTAAGCTATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp CCTCATCCGTCTAGTGAGGATGGTAATGTATCAAGCTTGGGAGAGTaGCTGGGAACATTAATTATTAAATGGGTTAATTCACATAAAGCC +
Preference number: 6 (lower is better)
Translates to: PHPSSEDGNVSSLGE*LGTLIIKWVNSHKA
Trigger: GGCTTTATGTGAATTAACCCATTTAATAATTAATGTTCCCAGCAACTCTCCCAAGCTTGATACATTACCATCCTCACTAGACGGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp CCTCAGTTTCCTCATCCGTCTAGTGAGGATGGTAATGTATCAAGCTaGGGAGAGTTGCTGGGAACATTAATTATTAAATGGGTTAATTCA +
Preference number: 6 (lower is better)
Translates to: PQFPHPSSEDGNVSS*GELLGTLIIKWVNS
Trigger: TGAATTAACCCATTTAATAATTAATGTTCCCAGCAACTCTCCCAAGCTTGATACATTACCATCCTCACTAGACGGATGAGGAAACTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS GCA 72 bp CATGTAAATAGCTTAGCAGTGTGTCTGGCATGTGAATaGTGGATAAAAGCTAACTATTATTGGTCACCACCA +
Preference number: 6 (lower is better)
Translates to: HVNSLAVCLACE*WIKANYYWSPP
Trigger: TGGTGGTGACCAATAATAGTTAGCTTTTATCCAGCATTCACATGCCAGACACACTGCTAAGCTATTTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp TTTTATGGTTTTGAAGCAATCAGTGTCACTCTAAGCTaGCCTTATCTCATCACGGTAATCTTTGCGTACTCT +
Preference number: 6 (lower is better)
Translates to: FYGFEAISVTLS*PYLITVIFAYS
Trigger: AGAGTACGCAAAGATTACCGTGATGAGATAAGGCAAGCTTAGAGTGACACTGATTGCTTCAAAACCATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 90 bp AGTTTCCTCGTTTGTAAAATCAGGATCAAAGGATTACTGCAAGGATaGAAAGAGATAAACCATGTAAATAGCTTAGCAGTGTGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: SFLVCKIRIKGLLQG*KEINHVNSLAVCLA
Trigger: TGCCAGACACACTGCTAAGCTATTTACATGGTTTATCTCTTTCAATCCTTGCAGTAATCCTTTGATCCTGATTTTACAAACGAGGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477421.2
CDS CAA 72 bp TCTAGTGAGGATGGTAATGTATCAAGCTTGGGAGAGTaGCTGGGAACATTAATTATTAAATGGGTTAATTCA +
Preference number: 6 (lower is better)
Translates to: SSEDGNVSSLGE*LGTLIIKWVNS
Trigger: TGAATTAACCCATTTAATAATTAATGTTCCCAGCAACTCTCCCAAGCTTGATACATTACCATCCTCACTAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477421.2