RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL26A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160963

Ensembl transcript IDs: ENST00000313669.12, ENST00000613091.1, ENST00000613501.1

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTGTGTCCCAGGTCCCAGCCCAGCAAGAGAGGAACACCAGGGCTaGGCTGATCACGGAGACCCTGGCCCCAGAGGCCTTGAGGGCTCC +
Preference number: 1 (lower is better)
Translates to: GCVPGPSPAREEHQG*ADHGDPGPRGLEGS
Trigger: GGAGCCCTCAAGGCCTCTGGGGCCAGGGTCTCCGTGATCAGCTCAGCCCTGGTGTTCCTCTCTTGCTGGGCTGGGACCTGGGACACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 90 bp GGCCTTGAGGGCTCCAGTCAGAGCTGTTCTGGGCTGCTAGGGACCTaGTGCCTGCCATGGAGCCTGCCAGGCCCCCAACTCTGGAAGGTG +
Preference number: 1 (lower is better)
Translates to: GLEGSSQSCSGLLGT*CLPWSLPGPQLWKV
Trigger: CACCTTCCAGAGTTGGGGGCCTGGCAGGCTCCATGGCAGGCACCAGGTCCCTAGCAGCCCAGAACAGCTCTGACTGGAGCCCTCAAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR TCA 90 bp CCTGCCTGCCTTAAGGAGCCGTTCTGGCCCTGCGCCCTCCCTGTCTaGGTTTTCTCTCGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACA +
Preference number: 1 (lower is better)
Translates to: PACLKEPFWPCALPV*VFSRRGEAGRVERT
Trigger: TGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAGAACGGCTCCTTAAGGCAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR TCA 90 bp GTGAAGACAGAGTGCCCCAGGGTGGCGCCAGCACCTTCAATTCTCTaGGTTTGCTGCCGTGGCTGTGTCCCAGGTCCCAGCCCAGCAAGA +
Preference number: 1 (lower is better)
Translates to: VKTECPRVAPAPSIL*VCCRGCVPGPSPAR
Trigger: TCTTGCTGGGCTGGGACCTGGGACACAGCCACGGCAGCAAACTCAGAGAATTGAAGGTGCTGGCGCCACCCTGGGGCACTCTGTCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 90 bp GGGCAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATaGTGCCTCCCCTGGCTCAGGGATGGGATGGACCCAGAGAGAGCG +
Preference number: 1 (lower is better)
Translates to: GQRLQVPPLIDMPMK*CLPWLRDGMDPERA
Trigger: CGCTCTCTCTGGGTCCATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 90 bp CAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTaGCTCAGGGATGGGATGGACCCAGAGAGAGCGGGTGGGCTCAGC +
Preference number: 1 (lower is better)
Translates to: QVPPLIDMPMKCCLP*LRDGMDPERAGGLS
Trigger: GCTGAGCCCACCCGCTCTCTCTGGGTCCATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 90 bp AGAGAGCGGGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATaGCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTC +
Preference number: 1 (lower is better)
Translates to: RERVGSARLGGSGQG*LSGLVDTCTPNASL
Trigger: GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACCCGCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTaGCTCCCCTGGCTCAGGGATGGGATGGACCCAGAGAGAGCGGGT +
Preference number: 1 (lower is better)
Translates to: QRLQVPPLIDMPMKC*LPWLRDGMDPERAG
Trigger: ACCCGCTCTCTCTGGGTCCATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTaGACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGC +
Preference number: 1 (lower is better)
Translates to: LGGSGQGCLSGLVDT*TPNASLSRSSSPYG
Trigger: GCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 90 bp CCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTaGTGTGAAGACAGAGTGCCCCAGGGTGGCGCCAGCACCTTCAAT +
Preference number: 1 (lower is better)
Translates to: PQPNRSTKSTGDSHS*CEDRVPQGGASTFN
Trigger: ATTGAAGGTGCTGGCGCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR TCA 90 bp GCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTaGAGACAGAGTGCCCCAGGGTGGCGCCAGCACCTTCAATTCTCT +
Preference number: 1 (lower is better)
Translates to: AKQEYQEHWRQSLLL*RQSAPGWRQHLQFS
Trigger: AGAGAATTGAAGGTGCTGGCGCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 90 bp CAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTaGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTC +
Preference number: 1 (lower is better)
Translates to: QQDWEAVARDAYLVW*TLAPPMLLSQGPQV
Trigger: GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 90 bp GCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTaGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAA +
Preference number: 1 (lower is better)
Translates to: AQQDWEAVARDAYLV*WTLAPPMLLSQGPQ
Trigger: TTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 90 bp TGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATaGTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATT +
Preference number: 1 (lower is better)
Translates to: WPGMPIWFGGHLHPQ*FSLKVLKSVWLAVI
Trigger: AATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 90 bp TCCCTCTCTGCAGCTTGCAAAGGGGACACTGGGCTTGCTGTGTCATaGAAAAGTAGCAAACCTATAGAGTCCACTGAGAGACAAACTCGT +
Preference number: 1 (lower is better)
Translates to: SLSAACKGDTGLAVS*KSSKPIESTERQTR
Trigger: ACGAGTTTGTCTCTCAGTGGACTCTATAGGTTTGCTACTTTTGCATGACACAGCAAGCCCAGTGTCCCCTTTGCAAGCTGCAGAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTCCTACCCCCTCAGGCTaGCTGGCCCAGCCTCCCCGC +
Preference number: 2 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGPTPSG*LAQPPR
Trigger: GCGGGGAGGCTGGGCCAGCCAGCCTGAGGGGGTAGG...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCGGCCCTGCAGGACCCTaGCTACCCCCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: GVPRALETVTPAVKTECPGPAGP*LPPQAG
Trigger: GCCAGCCTGAGGGGGTAGGCAGGGTCCTGCAGGGCC...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCGGCCCTGCAGGACCCTaGCTACCCCCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLGPAGP*LPPQAG
Trigger: GCCAGCCTGAGGGGGTAGGCAGGGTCCTGCAGGGCC...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CAA 90 bp GACAGAGTGCCCCAGGGTGGCGCCAGCACCTTCAATTCTCTGAGTTaGCTGCCGTGGCTGTGTCCCAGGTCCCAGCCCAGCAAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: DRVPQGGASTFNSLS*LPWLCPRSQPSKRG
Trigger: TCCTCTCTTGCTGGGCTGGGACCTGGGACACAGCCACGGCAGCAAACTCAGAGAATTGAAGGTGCTGGCGCCACCCTGGGGCACTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCCAGGCCCCCAACTCTaGAAGGTGGGAGGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSPGPQL*KVGGRS
Trigger: GCTCCTGCCTCCCACCTTCCAGAGTTGGGGGCCTGG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCACCTGGTGCCTGCCATaGAGCCTGCCAGGCCCCCAA +
Preference number: 2 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGTWCLP*SLPGPQ
Trigger: TTGGGGGCCTGGCAGGCTCCATGGCAGGCACCAGGT...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR TCA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCTGCGCCCTCCCTGTCTaGGTTTTCTCTCGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPCALPV*VFSRRG
Trigger: CCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCA...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR TCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTTGCGCCCTCCCTGTCTaGGTTTTCTCTCGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGCALPV*VFSRRG
Trigger: CCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCA...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATAGCTGCAGTCCAGGCTaGTCCCCCAGCCAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDSCSPG*SPSQWG
Trigger: TCCCCACTGGCTGGGGGAGCAGCCTGGACTGCAGCT...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp CTGGCCCTGCGCCCTCCCTGTCTGAGTTTTCTCTCGAAGAGGGGAAGCTGGCAGTCCAGACCCTGCCCCTaGAGACATTATCTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: LALRPPCLSFLSKRGSWQSRPCP*RHYLSP
Trigger: TGGGGACAGATAATGTCTCCAGGGGCAGGGTCTGGA...CTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCCTTAAGGAGCCGTTCTaGCCCTGCGCCCTCCCTGTC +
Preference number: 2 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLLKEPF*PCALPV
Trigger: GACAGGGAGGGCGCAGGGCCAGAACGGCTCCTTAAG...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCAGAGTGCCCCAGGGTaGCGCCAGCACCTTCAATTC +
Preference number: 2 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSQSAPG*RQHLQF
Trigger: GAATTGAAGGTGCTGGCGCCACCCTGGGGCACTCTG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGCTTAAGGAGCCGTTCTaGCCCTGCGCCCTCCCTGTC +
Preference number: 2 (lower is better)
Translates to: PQVRMAGSDLFRVSLASELKEPF*PCALPV
Trigger: GACAGGGAGGGCGCAGGGCCAGAACGGCTCCTTAAG...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTTATTCAGGGTCTCCCTaGCCTCTGAGAGCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGYSGSP*PLRAAV
Trigger: GACTGCAGCTCTCAGAGGCCAGGGAGACCCTGAATA...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCAGTCAGAGCTGTTCTaGGCTGCTAGGGACCTGGTG +
Preference number: 2 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSQSELF*AARDLV
Trigger: CACCAGGTCCCTAGCAGCCCAGAACAGCTCTGACTG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CAA 90 bp GGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTaGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: GSARLGGSGQGCLSG*VDTCTPNASLSRSS
Trigger: TGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR TCA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCATGGCTTCAGGAACTaGGGGTCCTGGGTTCAAATC +
Preference number: 2 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPHGFRN*GSWVQI
Trigger: GATTTGAACCCAGGACCCTCAGTTCCTGAAGCCATG...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp GGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTCCTCACAATCATCCATaGCTGGAGCCCAGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: GSGQGCLSGLVDTCTPNAPHNHP*LEPSSP
Trigger: AGGGGAACTGGGCTCCAGGCATGGATGATTGTGAGG...AGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGGCAGTGGCCAGGGATaGCTATCTGGTTTGGTGGAC +
Preference number: 2 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMGSGQG*LSGLVD
Trigger: GTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAAGACTGGGAGGCAGTaGCCAGGGATGCCTATCTGG +
Preference number: 2 (lower is better)
Translates to: GVPRALETVTPAVKTECPKTGRQ*PGMPIW
Trigger: CCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTT...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CAA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTaGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGG +
Preference number: 2 (lower is better)
Translates to: TGRQWPGMPIWFGGH*HPQCFSLKVLKSVW
Trigger: CCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR TCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCATGGCTTCAGGAACTaGGGGTCCTGGGTTCAAATC +
Preference number: 2 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSHGFRN*GSWVQI
Trigger: GATTTGAACCCAGGACCCTCAGTTCCTGAAGCCATG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR TCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCCGTATGGCTGGCAGTaGTTTATTCAGGGTCTCCCT +
Preference number: 2 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSPYGWQ*FIQGLP
Trigger: AGGGAGACCCTGAATAAATCACTGCCAGCCATACGG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCGGTTTGGTGGACACTTaGACCCCCAATGCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGGLVDT*TPNASL
Trigger: GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACC...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCTCCCTCTCTGCAGCTTaGAAAGGGGACACTGGGCTT +
Preference number: 2 (lower is better)
Translates to: GVPRALETVTPAVKTECPSLSAA*KGDTGL
Trigger: AAGCCCAGTGTCCCCTTTGCAAGCTGCAGAGAGGGA...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTCCACCCGTGATCTGGTaGCCAAGAGAGGGTTATTTC +
Preference number: 2 (lower is better)
Translates to: GSGQGCLSGLVDTCTPNAPPVIW*PREGYF
Trigger: GAAATAACCCTCTCTTGGCCACCAGATCACGGGTGG...AGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTATTCAGGGTCTCCCTaGCCTCTGAGAGCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLYSGSP*PLRAAV
Trigger: GACTGCAGCTCTCAGAGGCCAGGGAGACCCTGAATA...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR TCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCACCTATAGAGTCCACTaGGAGACAAACTCGTGGGGC +
Preference number: 2 (lower is better)
Translates to: GVPRALETVTPAVKTECPTYRVH*ETNSWG
Trigger: GCCCCACGAGTTTGTCTCTCAGTGGACTCTATAGGT...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGCCTCACAATCATCCATaGCTGGAGCCCAGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: PQVRMAGSDLFRVSLASEPHNHP*LEPSSP
Trigger: AGGGGAACTGGGCTCCAGGCATGGATGATTGTGAGG...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCCTCTGTTTCCCTCTCTaGAGCTTGCAAAGGGGACAC +
Preference number: 2 (lower is better)
Translates to: GVPRALETVTPAVKTECPLCFPL*SLQRGH
Trigger: GTGTCCCCTTTGCAAGCTGCAGAGAGGGAAACAGAG...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp CGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACATGGCTTCAGGAACTGAGGGTCGTAACGAAAGTTCCCTaGACAGGGCCAGTTACAGCA +
Preference number: 2 (lower is better)
Translates to: RRGEAGRVERTWLQELRVVTKVP*TGPVTA
Trigger: TGCTGTAACTGGCCCTGTCCAGGGAACTTTCGTTAC...GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCAGGGTCGAGAGAACATaGCTTCAGGAACTGAGGGTC +
Preference number: 2 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCRVERT*LQELRV
Trigger: GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCT...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTCGAGAGAACATaGCTTCAGGAACTGAGGGTC +
Preference number: 2 (lower is better)
Translates to: GVPRALETVTPAVKTECPRVERT*LQELRV
Trigger: GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCT...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCGATGCCTATCTGGTTTaGTGGACACTTGCACCCCCA +
Preference number: 2 (lower is better)
Translates to: GVPRALETVTPAVKTECPDAYLV*WTLAPP
Trigger: TGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATC...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTTGCAAAGGGGACACTaGGCTTGCTGTGTCATGCAA +
Preference number: 2 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSLQRGH*ACCVMQ
Trigger: TTGCATGACACAGCAAGCCCAGTGTCCCCTTTGCAA...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCGTAACGAAAGTTCCCTaGACAGGGCCAGTTACAGCA +
Preference number: 2 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLVTKVP*TGPVTA
Trigger: TGCTGTAACTGGCCCTGTCCAGGGAACTTTCGTTAC...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGTCCTCAAGTCCGTATaGCTGGCAGTGATTTATTCA +
Preference number: 2 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGVLKSV*LAVIYS
Trigger: TGAATAAATCACTGCCAGCCATACGGACTTGAGGAC...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTTGCAAAGGGGACACTaGGCTTGCTGTGTCATGCAA +
Preference number: 2 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCLQRGH*ACCVMQ
Trigger: TTGCATGACACAGCAAGCCCAGTGTCCCCTTTGCAA...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCCAGACCCTGCCCCTaGAGACATTATCTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGSRPCP*RHYLSP
Trigger: TGGGGACAGATAATGTCTCCAGGGGCAGGGTCTGGA...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR GCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCGGGCTTGCTGTGTCATaGAAAAGTAGCAAACCTATA +
Preference number: 2 (lower is better)
Translates to: GVPRALETVTPAVKTECPGLAVS*KSSKPI
Trigger: TATAGGTTTGCTACTTTTGCATGACACAGCAAGCCC...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR TCA 72 bp GGCTGGTGGTCCCGCCCGCCTCTGACCACCCCTCCATaGAGACAGAGACTGCCTCTCCAGACCTGCCTCAAG +
Preference number: 3 (lower is better)
Translates to: GWWSRPPLTTPP*RQRLPLQTCLK
Trigger: CTTGAGGCAGGTCTGGAGAGGCAGTCTCTGTCTTCATGGAGGGGTGGTCAGAGGCGGGCGGGACCACCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR TCA 72 bp GAGTGCCCCAGGGTGGCGCCAGCACCTTCAATTCTCTaGGTTTGCTGCCGTGGCTGTGTCCCAGGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: ECPRVAPAPSIL*VCCRGCVPGPS
Trigger: GCTGGGACCTGGGACACAGCCACGGCAGCAAACTCAGAGAATTGAAGGTGCTGGCGCCACCCTGGGGCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CAA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCGCTCTGATGAGGGTGTaGGCCCCTCCAGACCCTGCC +
Preference number: 3 (lower is better)
Translates to: GVPRALETVTPAVKTECPALMRV*APPDPA
Trigger: GGCAGGGTCTGGAGGGGCCAACACCCTCATCAGAGC...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CAA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCGCTCTGATGAGGGTGTaGGCCCCTCCAGACCCTGCC +
Preference number: 3 (lower is better)
Translates to: QRLQVPPLIDMPMKCCLPALMRV*APPDPA
Trigger: GGCAGGGTCTGGAGGGGCCAACACCCTCATCAGAGC...GGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR TCA 72 bp CTTAAGGAGCCGTTCTGGCCCTGCGCCCTCCCTGTCTaGGTTTTCTCTCGAAGAGGGGAAGCTGGCAGGGTC +
Preference number: 3 (lower is better)
Translates to: LKEPFWPCALPV*VFSRRGEAGRV
Trigger: GACCCTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAGAACGGCTCCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 72 bp GAGAGAGCGGGTGGGCTCAGCAAGACTGGGAGGCAGTaGCCAGGGATGCCTATCTGGTTTGGTGGACACTTG +
Preference number: 3 (lower is better)
Translates to: ERAGGLSKTGRQ*PGMPIWFGGHL
Trigger: CAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACCCGCTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR TCA 72 bp GAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTaGAGACAGAGTGCCCCAGGGTGGCGCCAGCACCTT +
Preference number: 3 (lower is better)
Translates to: EYQEHWRQSLLL*RQSAPGWRQHL
Trigger: AAGGTGCTGGCGCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 72 bp GTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATaGCTATCTGGTTTGGTGGACACTTGCACCCCCAAT +
Preference number: 3 (lower is better)
Translates to: VGSARLGGSGQG*LSGLVDTCTPN
Trigger: ATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 72 bp AACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTaGTGTGAAGACAGAGTGCCCCAGGGTGGCGCCAGC +
Preference number: 3 (lower is better)
Translates to: NRSTKSTGDSHS*CEDRVPQGGAS
Trigger: GCTGGCGCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CAA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCGGATGCCTATCTGGTTaGGTGGACACTTGCACCCCC +
Preference number: 3 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSGCLSG*VDTCTP
Trigger: GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCC...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR-3UTR CAA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTTCCCTCTCTGCAGCTaGCAAAGGGGACACTGGGCT +
Preference number: 3 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCFPLCS*QRGHWA
Trigger: AGCCCAGTGTCCCCTTTGCAAGCTGCAGAGAGGGAA...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 72 bp CAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTaGCTCCCCTGGCTCAGGGATGGGATGGACCCAGAG +
Preference number: 3 (lower is better)
Translates to: QVPPLIDMPMKC*LPWLRDGMDPE
Trigger: CTCTGGGTCCATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 72 bp TGGGTTCAAATCCTGCCCCTGCCACCCGTGATCTGGTaGCCAAGAGAGGGTTATTTCTACCGTCTGAGCCTC +
Preference number: 3 (lower is better)
Translates to: WVQILPLPPVIW*PREGYFYRLSL
Trigger: GAGGCTCAGACGGTAGAAATAACCCTCTCTTGGCCACCAGATCACGGGTGGCAGGGGCAGGATTTGAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 72 bp TCCTGGGTTCAAATCCTGCCCCTGCCACCCGTGATCTaGTGGCCAAGAGAGGGTTATTTCTACCGTCTGAGC +
Preference number: 3 (lower is better)
Translates to: SWVQILPLPPVI*WPREGYFYRLS
Trigger: GCTCAGACGGTAGAAATAACCCTCTCTTGGCCACCAGATCACGGGTGGCAGGGGCAGGATTTGAACCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 72 bp TGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTaGACACTTGCACCCCCAATGCTTCTCTCTCAAGGT +
Preference number: 3 (lower is better)
Translates to: WEAVARDAYLVW*TLAPPMLLSQG
Trigger: ACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 72 bp GACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTaGTGGACACTTGCACCCCCAATGCTTCTCTCTCAA +
Preference number: 3 (lower is better)
Translates to: DWEAVARDAYLV*WTLAPPMLLSQ
Trigger: TTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 72 bp AGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTaGTTTGGTGGACACTTGCACCCCCAATGCTTCTCT +
Preference number: 3 (lower is better)
Translates to: SKTGRQWPGMPI*FGGHLHPQCFS
Trigger: AGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 72 bp TCTCGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACATaGCTTCAGGAACTGAGGGTCCTGGGTTCAAATCCT +
Preference number: 3 (lower is better)
Translates to: SRRGEAGRVERT*LQELRVLGSNP
Trigger: AGGATTTGAACCCAGGACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CCA 72 bp CCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATaGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: PQCFSLKVLKSV*LAVIYSGSPWP
Trigger: AGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 72 bp ATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATaGTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTG +
Preference number: 3 (lower is better)
Translates to: MPIWFGGHLHPQ*FSLKVLKSVWL
Trigger: CAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR GCA 72 bp GCAGCTTGCAAAGGGGACACTGGGCTTGCTGTGTCATaGAAAAGTAGCAAACCTATAGAGTCCACTGAGAGA +
Preference number: 3 (lower is better)
Translates to: AACKGDTGLAVS*KSSKPIESTER
Trigger: TCTCTCAGTGGACTCTATAGGTTTGCTACTTTTGCATGACACAGCAAGCCCAGTGTCCCCTTTGCAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGCCCTGCGCCCTCCCTGTCTGAGTTTTCTCTCGAAGAGGGGAAGCTGGCAGCCTACCCCCTCAGGCTaGCTGGCCCAGCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LALRPPCLSFLSKRGSWQPTPSG*LAQPPR
Trigger: GCGGGGAGGCTGGGCCAGCCAGCCTGAGGGGGTAGG...CTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CTGGCCCTGCGCCCTCCCTGTCTGAGTTTTCTCTCGAAGAGGGGAAGCTGGCAGGGTCCCGCCCGCCTCTaGCCACCCCTCCATGAAGAC +
Preference number: 4 (lower is better)
Translates to: LALRPPCLSFLSKRGSWQGPARL*PPLHED
Trigger: GTCTTCATGGAGGGGTGGTCAGAGGCGGGCGGGACC...CTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGCCCTGCGCCCTCCCTGTCTGAGTTTTCTCTCGAAGAGGGGAAGCTGGCAGGGCCACCGGCAGCTCTaGTACACGCGCTGGACCACC +
Preference number: 4 (lower is better)
Translates to: LALRPPCLSFLSKRGSWQGHRQL*YTRWTT
Trigger: GGTGGTCCAGCGCGTGTACCAGAGCTGCCGGTGGCC...CTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACATGGCTTCAGGAACTGAGGGTCGCCTGCAGGCCCTGGTaGTCCTGTCTGCCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RRGEAGRVERTWLQELRVACRPW*SCLPRG
Trigger: CCCCCGGGGCAGACAGGACCACCAGGGCCTGCAGGC...GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCCGGACGGCCCCACTGTaGCTCGCTCTCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGRTAPL*LALQPG
Trigger: GCCTGGCTGGAGAGCGAGGCACAGTGGGGCCGTCCG...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGGACCCCGGGGTCCTaGGACACCTGCCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGGTPGS*DTCQHC
Trigger: ACAGTGCTGGCAGGTGTCCCAGGACCCCGGGGTCCC...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCGGATCCAGGTGTTCCTaGGGGTCCTGGGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPGSRCS*GSWGTS
Trigger: CGAGGTCCCCCAGGACCCCCAGGAACACCTGGATCC...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGTCCGTGTCACTGTGTaGTGGCACCAGTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGVRVTV*WHQCRR
Trigger: CCGCCGGCACTGGTGCCATCACACAGTGACACGGAC...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCCACAGTTGCTCCCGGTaGAGCCAGGGCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPHSCSR*SQGSIS
Trigger: GGAGATGCTGCCCTGGCTTCACCGGGAGCAACTGTG...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCTGTCGTGGCACAGGGTaGGCAAGAGGGATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPCRGTG*ARGMAS
Trigger: CGACGCCATCCCTCTTGCTCACCCTGTGCCACGACA...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCGTGAGGGGCCTGGGTTaGCTGCTGGGCCGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QRLQVPPLIDMPMKCCLPVRGLG*LLGRVV
Trigger: GACCACCCGGCCCAGCAGGCAACCCAGGCCCCTCAC...GGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGCGGACGGCCCCACTGTaGCTCGCTCTCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMRTAPL*LALQPG
Trigger: GCCTGGCTGGAGAGCGAGGCACAGTGGGGCCGTCCG...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCGGCCCTGCAGGACCCTaGCTACCCCCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QRLQVPPLIDMPMKCCLPGPAGP*LPPQAG
Trigger: GCCAGCCTGAGGGGGTAGGCAGGGTCCTGCAGGGCC...GGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGCCCGGCTGGGCCCGTaGGCCTTCTCTGTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMARLGP*AFSVVA
Trigger: TGCCACGACAGAGAAGGCCCACGGGCCCAGCCGGGC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCCCAGGCGGCCCCGCTaGACCCTTCTCTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSPRRPR*TLLSCL
Trigger: CAGACAGGAGAGAAGGGTCCAGCGGGGCCGCCTGGG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGCCTACCCCCTCAGGCTaGCTGGCCCAGCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASEPTPSG*LAQPPR
Trigger: GCGGGGAGGCTGGGCCAGCCAGCCTGAGGGGGTAGG...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCGAGTCCTTACGAGGTTaGCGCAGGGCCCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGESLRG*RRAPAT
Trigger: GGTGGCCGGGGCCCTGCGCCAACCTCGTAAGGACTC...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613501.1
CDS-3UTR TCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCGTCCGTGTCACTGTGTaGTGGCACCAGTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSVRVTV*WHQCRR
Trigger: CCGCCGGCACTGGTGCCATCACACAGTGACACGGAC...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCCGGTCGGAGCCCGGGTaGGAGCTGGAAATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGRSEPG*ELEMCG
Trigger: CCCACACATTTCCAGCTCGCACCCGGGCTCCGACCG...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCGTCTCCGAGCCATTCTaGACCTGGCAGGACACCGTC +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPVSEPF*TWQDTV
Trigger: GACGGTGTCCTGCCAGGTGCAGAATGGCTCGGAGAC...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGGTGAGGGGCCTGGGTTaGCTGCTGGGCCGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASEVRGLG*LLGRVV
Trigger: GACCACCCGGCCCAGCAGGCAACCCAGGCCCCTCAC...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTCACCCCCTCGCCCTCTaGAGTGGCGGCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GSGQGCLSGLVDTCTPNAHPLAL*SGGFLS
Trigger: GGAGAGAAAGCCGCCACTGCAGAGGGCGAGGGGGTG...AGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTAGCTGCAGTCCAGGCTaGTCCCCCAGCCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSGQGCLSGLVDTCTPNASCSPG*SPSQWG
Trigger: TCCCCACTGGCTGGGGGAGCAGCCTGGACTGCAGCT...AGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCGATAGAGGAAGCCGGTaGCCAGCGCCGACCCGCAGA +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGDRGSR*PAPTRR
Trigger: TCTGCGGGTCGGCGCTGGCCACCGGCTTCCTCTATC...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCGAGCCATTCTGCACCTaGCAGGACACCGTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPEPFCT*QDTVRV
Trigger: GACACGGACGGTGTCCTGCCAGGTGCAGAATGGCTC...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGCCCTGCGCCCTCCCTGTCTGAGTTTTCTCTCGAAGAGGGGAAGCTGGCAGGAGCCATTCTGCACCTaGCAGGACACCGTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LALRPPCLSFLSKRGSWQEPFCT*QDTVRV
Trigger: GACACGGACGGTGTCCTGCCAGGTGCAGAATGGCTC...CTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGGCCACCGGCAGCTCTaGTACACGCGCTGGACCACC +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMGHRQL*YTRWTT
Trigger: GGTGGTCCAGCGCGTGTACCAGAGCTGCCGGTGGCC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCAGTGCTCTCGGGGGCTaGCAGGTCGTTGTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGSALGG*QVVVRA
Trigger: AGCCCGGACAACGACCTGCCAGCCCCCGAGAGCACT...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGCCTGCAGGCCCTGGTaGTCCTGTCTGCCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVACRPW*SCLPRG
Trigger: CCCCCGGGGCAGACAGGACCACCAGGGCCTGCAGGC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCCCCAGGCGGCCCCGCTaGACCCTTCTCTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCPRRPR*TLLSCL
Trigger: CAGACAGGAGAGAAGGGTCCAGCGGGGCCGCCTGGG...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCGGGACCCCGGGGTCCTaGGACACCTGCCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPGTPGS*DTCQHC
Trigger: ACAGTGCTGGCAGGTGTCCCAGGACCCCGGGGTCCC...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCTCTCCAGCCAGGCCCTaGGATCCAGGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPSPARP*DPGVPG
Trigger: CCCAGGAACACCTGGATCCCAGGGCCTGGCTGGAGA...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCACCTGGTGCCTGCCATaGAGCCTGCCAGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSTWCLP*SLPGPQ
Trigger: TTGGGGGCCTGGCAGGCTCCATGGCAGGCACCAGGT...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACATGGCTTCAGGAACTGAGGGTCGGGCTGCTAGGGACCTaGTGCCTGCCATGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RRGEAGRVERTWLQELRVGLLGT*CLPWSL
Trigger: CAGGCTCCATGGCAGGCACCAGGTCCCTAGCAGCCC...GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCAACGCTACAGGCTGGTaGTCCCGCCCGCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGNATGW*SRPPLT
Trigger: GGTCAGAGGCGGGCGGGACCACCAGCCTGTAGCGTT...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCGCTCACTCATGTCACTaGGCCGGGTGCAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPAHSCH*AGCSSC
Trigger: GCATGAACTGCACCCGGCTCAGTGACATGAGTGAGC...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTCAGTCACTCCTGCTGTaGAGACAGAGTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGQSLLL*RQSAPG
Trigger: CCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTG...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCCGGTCGGAGCCCGGGTaGGAGCTGGAAATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLRSEPG*ELEMCG
Trigger: CCCACACATTTCCAGCTCGCACCCGGGCTCCGACCG...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTCCAGCACCGTCACCGTaGGGTAGGACACTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGPAPSP*GRTLCR
Trigger: CCTACAGAGTGTCCTACCGCACGGTGACGGTGCTGG...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCGCTCTCACTTCCTGCTaGTGGCCTGGTCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPALTSC*WPGPRS
Trigger: AGAGCGTGGACCAGGCCAGCAGCAGGAAGTGAGAGC...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGGCCCTGCAGGACCCTaGCTACCCCCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVGPAGP*LPPQAG
Trigger: GCCAGCCTGAGGGGGTAGGCAGGGTCCTGCAGGGCC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCGACATGCCCATGAAATaGTGCCTCCCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPDMPMK*CLPWLR
Trigger: CCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTC...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTGCTGTGAAGACAGAGTaGCCCAGGGTGGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSGQGCLSGLVDTCTPNAAVKTE*PRVAPA
Trigger: TGCTGGCGCCACCCTGGGGCACTCTGTCTTCACAGC...AGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGATAGAGGAAGCCGGTaGCCAGCGCCGACCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMDRGSR*PAPTRR
Trigger: TCTGCGGGTCGGCGCTGGCCACCGGCTTCCTCTATC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCAGTGCTCTCGGGGGCTaGCAGGTCGTTGTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLSALGG*QVVVRA
Trigger: AGCCCGGACAACGACCTGCCAGCCCCCGAGAGCACT...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGCCCGGCTGGGCCCGTaGGCCTTCTCTGTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVARLGP*AFSVVA
Trigger: TGCCACGACAGAGAAGGCCCACGGGCCCAGCCGGGC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGGATCCAGGTGTTCCTaGGGGTCCTGGGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMGSRCS*GSWGTS
Trigger: CGAGGTCCCCCAGGACCCCCAGGAACACCTGGATCC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCGCCAGAACCTCCCTCTaGGGAGGCCAGGGGATCGTG +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPARTSL*GGQGIV
Trigger: CACGATCCCCTGGCCTCCCCAGAGGGAGGTTCTGGC...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCCTCAGGGCAGCATCCTaGCCAGAACCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGLRAAS*PEPPSG
Trigger: CCCAGAGGGAGGTTCTGGCCAGGATGCTGCCCTGAG...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTCCCAGAGAGAGCGGGTaGGCTCAGCAAGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: GSGQGCLSGLVDTCTPNAPRESG*AQQDWE
Trigger: CTCCCAGTCTTGCTGAGCCCACCCGCTCTCTCTGGG...AGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACATGGCTTCAGGAACTGAGGGTCGGCTCAGGGATGGGATaGACCCAGAGAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RRGEAGRVERTWLQELRVGSGMG*TQRERV
Trigger: CACCCGCTCTCTCTGGGTCCATCCCATCCCTGAGCC...GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCGGCTCAGGGATGGGATaGACCCAGAGAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGGSGMG*TQRERV
Trigger: CACCCGCTCTCTCTGGGTCCATCCCATCCCTGAGCC...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGCCAGGCCCCCAACTCTaGAAGGTGGGAGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMPGPQL*KVGGRS
Trigger: GCTCCTGCCTCCCACCTTCCAGAGTTGGGGGCCTGG...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCCCAGGCCCCCAACTCTaGAAGGTGGGAGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCPGPQL*KVGGRS
Trigger: GCTCCTGCCTCCCACCTTCCAGAGTTGGGGGCCTGG...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGCCCTGCGCCCTCCCTGTCTGAGTTTTCTCTCGAAGAGGGGAAGCTGGCAGCAGTCAGAGCTGTTCTaGGCTGCTAGGGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: LALRPPCLSFLSKRGSWQQSELF*AARDLV
Trigger: CACCAGGTCCCTAGCAGCCCAGAACAGCTCTGACTG...CTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCAACGCTACAGGCTGGTaGTCCCGCCCGCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLNATGW*SRPPLT
Trigger: GGTCAGAGGCGGGCGGGACCACCAGCCTGTAGCGTT...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCCACAGTTGCTCCCGGTaGAGCCAGGGCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLHSCSR*SQGSIS
Trigger: GGAGATGCTGCCCTGGCTTCACCGGGAGCAACTGTG...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGCTCACTCATGTCACTaGGCCGGGTGCAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGAHSCH*AGCSSC
Trigger: GCATGAACTGCACCCGGCTCAGTGACATGAGTGAGC...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTCGTGGCACAGGGTaGGCAAGAGGGATGGCGTCG +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCCRGTG*ARGMAS
Trigger: CGACGCCATCCCTCTTGCTCACCCTGTGCCACGACA...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCGAGGAACACCAGGGCTaGGCTGATCACGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSEEHQG*ADHGDP
Trigger: AGGGTCTCCGTGATCAGCTCAGCCCTGGTGTTCCTC...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGGTCCCGCCCGCCTCTaGCCACCCCTCCATGAAGAC +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVGPARL*PPLHED
Trigger: GTCTTCATGGAGGGGTGGTCAGAGGCGGGCGGGACC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CTGGCCCTGCGCCCTCCCTGTCTGAGTTTTCTCTCGAAGAGGGGAAGCTGGCAGCCTCACAATCATCCATaGCTGGAGCCCAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LALRPPCLSFLSKRGSWQPHNHP*LEPSSP
Trigger: AGGGGAACTGGGCTCCAGGCATGGATGATTGTGAGG...CTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCGGTCGTTGTCCGGGCTaGAGGGCCGTTCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPGRCPG*RAVLLL
Trigger: AAGCAGCAGAACGGCCCTCCAGCCCGGACAACGACC...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCTGTTCCTGGGGGTCCTaGGGGACCTCGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVCSWGS*GTSRPR
Trigger: CCTGGGCCTCGAGGTCCCCCAGGACCCCCAGGAACA...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTCTCCAGCCAGGCCCTaGGATCCAGGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QRLQVPPLIDMPMKCCLPSPARP*DPGVPG
Trigger: CCCAGGAACACCTGGATCCCAGGGCCTGGCTGGAGA...GGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTCCTCGCCCTCTGCAGTaGCGGCTTTCTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGPRPLQ*RLSLLL
Trigger: AAGAAGGAGAGAAAGCCGCCACTGCAGAGGGCGAGG...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATGCCAGAACCTCCCTCTaGGGAGGCCAGGGGATCGTG +
Preference number: 4 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDARTSL*GGQGIV
Trigger: CACGATCCCCTGGCCTCCCCAGAGGGAGGTTCTGGC...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCAGGACCCCATCGGGTTaGGCGCCACCCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCRTPSG*APPLFI
Trigger: GATGAAGAGGGGTGGCGCCCAACCCGATGGGGTCCT...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTCTCACTTCCTGCTGCTaGCCTGGTCCACGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGLTSCC*PGPRSS
Trigger: AGAAGAGCGTGGACCAGGCCAGCAGCAGGAAGTGAG...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTCAGGACAGGGTGTCCTaGAGCAGTGGGCTCTCACTT +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGQDRVS*SSGLSL
Trigger: AAGTGAGAGCCCACTGCTCCAGGACACCCTGTCCTG...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCTCCAGACCCTGCCCCTaGAGACATTATCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPSRPCP*RHYLSP
Trigger: TGGGGACAGATAATGTCTCCAGGGGCAGGGTCTGGA...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGCTTAAGGAGCCGTTCTaGCCCTGCGCCCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMLKEPF*PCALPV
Trigger: GACAGGGAGGGCGCAGGGCCAGAACGGCTCCTTAAG...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGCCCTGCGCCCTCCCTGTCTGAGTTTTCTCTCGAAGAGGGGAAGCTGGCAGTATTCAGGGTCTCCCTaGCCTCTGAGAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LALRPPCLSFLSKRGSWQYSGSP*PLRAAV
Trigger: GACTGCAGCTCTCAGAGGCCAGGGAGACCCTGAATA...CTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCCCCAGAGAGAGCGGGTaGGCTCAGCAAGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: QRLQVPPLIDMPMKCCLPPRESG*AQQDWE
Trigger: CTCCCAGTCTTGCTGAGCCCACCCGCTCTCTCTGGG...GGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTAAATGCTGCCTCCCCTaGCTCAGGGATGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGKCCLP*LRDGMD
Trigger: GTCCATCCCATCCCTGAGCCAGGGGAGGCAGCATTT...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCAATAACGCTACAGGCTaGTGGTCCCGCCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGNNATG*WSRPPL
Trigger: CAGAGGCGGGCGGGACCACCAGCCTGTAGCGTTATT...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACATGGCTTCAGGAACTGAGGGTCTCATGTGCTCCAGGATaGGGACTCGCTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RRGEAGRVERTWLQELRVSCAPG*GLALPG
Trigger: TCCTGGCAGAGCGAGTCCTCATCCTGGAGCACATGA...GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCACCCCTCTTCATCTTaGGGTTGGCTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSHPSSS*GWLSGQ
Trigger: CTGCCCTGAGAGCCAACCTCAAGATGAAGAGGGGTG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCCAGTCACTCCTGCTGTaGAGACAGAGTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLQSLLL*RQSAPG
Trigger: CCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTG...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGTGCTGCTGCAGAGCTaGGGCCGAGAAGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMVLLQS*GREGIE
Trigger: CTCTATCCCTTCTCGGCCGCAGCTCTGCAGCAGCAC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCCCAGCACCGTCACCGTaGGGTAGGACACTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCPAPSP*GRTLCR
Trigger: CCTACAGAGTGTCCTACCGCACGGTGACGGTGCTGG...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCGCTCTCACTTCCTGCTaGTGGCCTGGTCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCALTSC*WPGPRS
Trigger: AGAGCGTGGACCAGGCCAGCAGCAGGAAGTGAGAGC...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGTGGGCTCTCACTTCCTaGTGCTGGCCTGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASEWALTS*CWPGPR
Trigger: GCGTGGACCAGGCCAGCAGCAGGAAGTGAGAGCCCA...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCGGCAGTGGCCAGGGATaGCTATCTGGTTTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSGSGQG*LSGLVD
Trigger: GTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCGACATGCCCATGAAATaGTGCCTCCCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSDMPMK*CLPWLR
Trigger: CCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTC...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCCTGCCTCTCCAGACCTaGCTCAAGGGCCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGLPLQT*LKGQKK
Trigger: CTTCTTCTGGCCCTTGAGGCAGGTCTGGAGAGGCAG...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTGTAACTTACGAGGTTaGCGCAGGGCCCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDCNLRG*RRAPAT
Trigger: GGTGGCCGGGGCCCTGCGCCAACCTCGTAAGTTACA...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313669.12
CDS-3UTR CCA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCCTTGGCCTCCAGTGTaGTCAGTCGCTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPPWPPV*SVAHSC
Trigger: ACATGAGTGAGCGACTGACCACACTGGAGGCCAAGG...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCTAGCAGGAGGACCTTaGCCTCCAGTGTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSLAGGP*PPVWSV
Trigger: GACTGACCACACTGGAGGCCAAGGTCCTCCTGCTAG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGGGTCGTTGTCCGGGCTaGAGGGCCGTTCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASEGRCPG*RAVLLL
Trigger: AAGCAGCAGAACGGCCCTCCAGCCCGGACAACGACC...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCGGTGAGCAAGAGGGATaGCGTCGGGGAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPGEQEG*RRGGSP
Trigger: AGGACTTCCTCCCCGACGCCATCCCTCTTGCTCACC...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCCCTTCTCTCCTGTCTaGCCTCGGTCACCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPPFSPV*PRSPLD
Trigger: GTCTAAAGGTGACCGAGGCCAGACAGGAGAGAAGGG...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTGCACTGTGTCCACGATaGCAGAGGCCAGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GSGQGCLSGLVDTCTPNAALCPR*QRPALS
Trigger: ACTCAAGGCTGGCCTCTGCCATCGTGGACACAGTGC...AGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGCTCAGGGCAGCATCCTaGCCAGAACCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASELRAAS*PEPPSG
Trigger: CCCAGAGGGAGGTTCTGGCCAGGATGCTGCCCTGAG...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGAGGACCCCATCGGGTTaGGCGCCACCCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASERTPSG*APPLFI
Trigger: GATGAAGAGGGGTGGCGCCCAACCCGATGGGGTCCT...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGCCCTGCGCCCTCCCTGTCTGAGTTTTCTCTCGAAGAGGGGAAGCTGGCAGGCCTATCTGGTTTGGTaGACACTTGCACCCCCAATG +
Preference number: 4 (lower is better)
Translates to: LALRPPCLSFLSKRGSWQAYLVW*TLAPPM
Trigger: CATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGC...CTGCCAGCTTCCCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCAGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCAAGACTGGGAGGCAGTaGCCAGGGATGCCTATCTGG +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSKTGRQ*PGMPIW
Trigger: CCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTT...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATCCCCTGGCTCAGGGATaGGATGGACCCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDPLAQG*DGPRES
Trigger: GCTCTCTCTGGGTCCATCCCATCCCTGAGCCAGGGG...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCCAGAGTGCCCCAGGGTaGCGCCAGCACCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPQSAPG*RQHLQF
Trigger: GAATTGAAGGTGCTGGCGCCACCCTGGGGCACTCTG...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCGAGTACCAAGAGCACTaGAGACAGTCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPEYQEH*RQSLLL
Trigger: CAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTC...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCGGCAGAGGCCAGCCTTaGGTCTCCATTGTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGGRGQP*VSIVFV
Trigger: GACAAAGACAATGGAGACTCAAGGCTGGCCTCTGCC...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGTGCGCCCTCCCTGTCTaGGTTTTCTCTCGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMCALPV*VFSRRG
Trigger: CCCTCTTCGAGAGAAAACTCAGACAGGGAGGGCGCA...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTACCTATAGAGTCCACTaGGAGACAAACTCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGTYRVH*ETNSWG
Trigger: GCCCCACGAGTTTGTCTCTCAGTGGACTCTATAGGT...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCGCACCTTCAATTCTCTaGGTTTGCTGCCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPAPSIL*VCCRGC
Trigger: ACAGCCACGGCAGCAAACTCAGAGAATTGAAGGTGC...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCCTGACCACCCCTCCATaGAGACAGAGACTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPLTTPP*RQRLPL
Trigger: GAGAGGCAGTCTCTGTCTTCATGGAGGGGTGGTCAG...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCCTGACCACCCCTCCATaGAGACAGAGACTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLLTTPP*RQRLPL
Trigger: GAGAGGCAGTCTCTGTCTTCATGGAGGGGTGGTCAG...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCTCTGTAGGTGGGTCTaGTCAGAGTCCTTACGAGGT +
Preference number: 4 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPLCRWV*SESLRG
Trigger: ACCTCGTAAGGACTCTGATCAGACCCACCTACAGAG...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613501.1
CDS-3UTR GCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGGTGCTGCTGCAGAGCTaGGGCCGAGAAGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASEVLLQS*GREGIE
Trigger: CTCTATCCCTTCTCGGCCGCAGCTCTGCAGCAGCAC...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGATGAGGACTCGCTCTaGCAGGATCTTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMDEDSL*QDLQGL
Trigger: GAGGCCCTGAAGATCCTGGCAGAGCGAGTCCTCATC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCGATGAGGACTCGCTCTaGCAGGATCTTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLDEDSL*QDLQGL
Trigger: GAGGCCCTGAAGATCCTGGCAGAGCGAGTCCTCATC...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCTGGGCTCTCACTTCCTaGTGCTGGCCTGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVWALTS*CWPGPR
Trigger: GCGTGGACCAGGCCAGCAGCAGGAAGTGAGAGCCCA...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGCTGTGAAGACAGAGTaGCCCAGGGTGGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVAVKTE*PRVAPA
Trigger: TGCTGGCGCCACCCTGGGGCACTCTGTCTTCACAGC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCTCTGGTACACGCGCTaGACCACCGTCTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVLWYTR*TTVSEP
Trigger: TGGCTCGGAGACGGTGGTCCAGCGCGTGTACCAGAG...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCCCTTGGCCTCCAGTGTaGTCAGTCGCTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGPWPPV*SVAHSC
Trigger: ACATGAGTGAGCGACTGACCACACTGGAGGCCAAGG...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGGGTGAGCAAGAGGGATaGCGTCGGGGAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASEGEQEG*RRGGSP
Trigger: AGGACTTCCTCCCCGACGCCATCCCTCTTGCTCACC...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATGGGCCTTCTCTGTCGTaGCACAGGGTGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDGPSLS*HRVSKR
Trigger: CCTCTTGCTCACCCTGTGCCACGACAGAGAAGGCCC...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGCCTCGCCCTCTGCAGTaGCGGCTTTCTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMPRPLQ*RLSLLL
Trigger: AAGAAGGAGAGAAAGCCGCCACTGCAGAGGGCGAGG...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCGAGGCCAGGGGATCGTaGATCCCAATCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCEARGS*IPIMCS
Trigger: GGAGCACATGATTGGGATCCACGATCCCCTGGCCTC...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCCTCACTTCCTGCTGCTaGCCTGGTCCACGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPLTSCC*PGPRSS
Trigger: AGAAGAGCGTGGACCAGGCCAGCAGCAGGAAGTGAG...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGCAGGACAGGGTGTCCTaGAGCAGTGGGCTCTCACTT +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMQDRVS*SSGLSL
Trigger: AAGTGAGAGCCCACTGCTCCAGGACACCCTGTCCTG...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCGTAACGAAAGTTCCCTaGACAGGGCCAGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPVTKVP*TGPVTA
Trigger: TGCTGTAACTGGCCCTGTCCAGGGAACTTTCGTTAC...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTAGGGTCGAGAGAACATaGCTTCAGGAACTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGRVERT*LQELRV
Trigger: GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCT...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCTTAAGGAGCCGTTCTaGCCCTGCGCCCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVLKEPF*PCALPV
Trigger: GACAGGGAGGGCGCAGGGCCAGAACGGCTCCTTAAG...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATCAGAGTGCCCCAGGGTaGCGCCAGCACCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDQSAPG*RQHLQF
Trigger: GAATTGAAGGTGCTGGCGCCACCCTGGGGCACTCTG...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCGGCAGAGGCCAGCCTTaGGTCTCCATTGTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCGRGQP*VSIVFV
Trigger: GACAAAGACAATGGAGACTCAAGGCTGGCCTCTGCC...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGTCATGTGCTCCAGGATaGGGACTCGCTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASESCAPG*GLALPG
Trigger: TCCTGGCAGAGCGAGTCCTCATCCTGGAGCACATGA...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTCATGGCTTCAGGAACTaGGGGTCCTGGGTTCAAATC +
Preference number: 4 (lower is better)
Translates to: GSGQGCLSGLVDTCTPNAHGFRN*GSWVQI
Trigger: GATTTGAACCCAGGACCCTCAGTTCCTGAAGCCATG...AGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGAGGAACACCAGGGCTaGGCTGATCACGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVEEHQG*ADHGDP
Trigger: AGGGTCTCCGTGATCAGCTCAGCCCTGGTGTTCCTC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGCACCCCCTCGCCCTCTaGAGTGGCGGCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGHPLAL*SGGFLS
Trigger: GGAGAGAAAGCCGCCACTGCAGAGGGCGAGGGGGTG...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGAGCTGCAGTCCAGGCTaGTCCCCCAGCCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGSCSPG*SPSQWG
Trigger: TCCCCACTGGCTGGGGGAGCAGCCTGGACTGCAGCT...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCACTTGCACCCCCAATaGTTCTCTCTCAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSHLHPQ*FSLKVL
Trigger: GAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCATGCCCATGAAATGCTaGCTCCCCTGGCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPMPMKC*LPWLRD
Trigger: ATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCAT...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCTCTGTTTCCCTCTCTaGAGCTTGCAAAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSLCFPL*SLQRGH
Trigger: GTGTCCCCTTTGCAAGCTGCAGAGAGGGAAACAGAG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCCTCTGTTTCCCTCTCTaGAGCTTGCAAAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGLCFPL*SLQRGH
Trigger: GTGTCCCCTTTGCAAGCTGCAGAGAGGGAAACAGAG...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGCTGCCTCTCCAGACCTaGCTCAAGGGCCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASELPLQT*LKGQKK
Trigger: CTTCTTCTGGCCCTTGAGGCAGGTCTGGAGAGGCAG...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGCTAGCAGGAGGACCTTaGCCTCCAGTGTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASELAGGP*PPVWSV
Trigger: GACTGACCACACTGGAGGCCAAGGTCCTCCTGCTAG...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGGGCCTTCTCTGTCGTaGCACAGGGTGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVGPSLS*HRVSKR
Trigger: CCTCTTGCTCACCCTGTGCCACGACAGAGAAGGCCC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCCCCTTCTCTCCTGTCTaGCCTCGGTCACCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLPFSPV*PRSPLD
Trigger: GTCTAAAGGTGACCGAGGCCAGACAGGAGAGAAGGG...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp AAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAGGGTGGCCCACCCGTGATCTGGTaGCCAAGAGAGGGTTATTTC +
Preference number: 4 (lower is better)
Translates to: KSTGDSHSCCEDRVPQGGPPVIW*PREGYF
Trigger: GAAATAACCCTCTCTTGGCCACCAGATCACGGGTGG...GCCACCCTGGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACATGGCTTCAGGAACTGAGGGTCAGGGTCGAGAGAACATaGCTTCAGGAACTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: RRGEAGRVERTWLQELRVRVERT*LQELRV
Trigger: GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCT...GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGAAATGCTGCCTCCCCTaGCTCAGGGATGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASEKCCLP*LRDGMD
Trigger: GTCCATCCCATCCCTGAGCCAGGGGAGGCAGCATTT...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGGGGCTGCTAGGGACCTaGTGCCTGCCATGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGGLLGT*CLPWSL
Trigger: CAGGCTCCATGGCAGGCACCAGGTCCCTAGCAGCCC...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCAATAACGCTACAGGCTaGTGGTCCCGCCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVNNATG*WSRPPL
Trigger: CAGAGGCGGGCGGGACCACCAGCCTGTAGCGTTATT...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CAA 72 bp AGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTaGGTGGACACTTGCACCCCCAATGCTTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RLGGSGQGCLSG*VDTCTPNASLS
Trigger: TGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCACCCCTCTTCATCTTaGGGTTGGCTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVHPSSS*GWLSGQ
Trigger: CTGCCCTGAGAGCCAACCTCAAGATGAAGAGGGGTG...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCCCGTATGGCTGGCAGTaGTTTATTCAGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPPYGWQ*FIQGLP
Trigger: AGGGAGACCCTGAATAAATCACTGCCAGCCATACGG...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGCACCTTCAATTCTCTaGGTTTGCTGCCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMAPSIL*VCCRGC
Trigger: ACAGCCACGGCAGCAAACTCAGAGAATTGAAGGTGC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCGGTTTGGTGGACACTTaGACCCCCAATGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLGLVDT*TPNASL
Trigger: GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACC...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGCACTGTGTCCACGATaGCAGAGGCCAGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVALCPR*QRPALS
Trigger: ACTCAAGGCTGGCCTCTGCCATCGTGGACACAGTGC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTCCAGACCCTGCCCCTaGAGACATTATCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDSRPCP*RHYLSP
Trigger: TGGGGACAGATAATGTCTCCAGGGGCAGGGTCTGGA...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCCCACCCGTGATCTGGTaGCCAAGAGAGGGTTATTTC +
Preference number: 4 (lower is better)
Translates to: QRLQVPPLIDMPMKCCLPPPVIW*PREGYF
Trigger: GAAATAACCCTCTCTTGGCCACCAGATCACGGGTGG...GGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCGATGCCTATCTGGTTTaGTGGACACTTGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCDAYLV*WTLAPP
Trigger: TGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATC...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCCCAGGGATGCCTATCTaGTTTGGTGGACACTTGCAC +
Preference number: 4 (lower is better)
Translates to: GVPRALETVTPAVKTECPPGMPI*FGGHLH
Trigger: GTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGG...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCCCAGGGATGCCTATCTaGTTTGGTGGACACTTGCAC +
Preference number: 4 (lower is better)
Translates to: QRLQVPPLIDMPMKCCLPPGMPI*FGGHLH
Trigger: GTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGG...GGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGCCCCTGGCTCAGGGATaGGATGGACCCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGPLAQG*DGPRES
Trigger: GCTCTCTCTGGGTCCATCCCATCCCTGAGCCAGGGG...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCGAGTACCAAGAGCACTaGAGACAGTCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCEYQEH*RQSLLL
Trigger: CAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTC...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
3UTR CAA 72 bp CAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTaGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QWPGMPIWFGGH*HPQCFSLKVLK
Trigger: CTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATCATGGCTTCAGGAACTaGGGGTCCTGGGTTCAAATC +
Preference number: 4 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDHGFRN*GSWVQI
Trigger: GATTTGAACCCAGGACCCTCAGTTCCTGAAGCCATG...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTGGATCCCAATCATGTaGTCCAGGATGAGGACTCGC +
Preference number: 4 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDWIPIM*SRMRTR
Trigger: GCGAGTCCTCATCCTGGAGCACATGATTGGGATCCA...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCTCCCTCTCTGCAGCTTaGAAAGGGGACACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVSLSAA*KGDTGL
Trigger: AAGCCCAGTGTCCCCTTTGCAAGCTGCAGAGAGGGA...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCTATTCAGGGTCTCCCTaGCCTCTGAGAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVYSGSP*PLRAAV
Trigger: GACTGCAGCTCTCAGAGGCCAGGGAGACCCTGAATA...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATGCCTATCTGGTTTGGTaGACACTTGCACCCCCAATG +
Preference number: 4 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDAYLVW*TLAPPM
Trigger: CATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGC...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCCTCTGTAGGTGGGTCTaGTCAGAGTCCTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCLCRWV*SESCNL
Trigger: TAAGTTACAGGACTCTGATCAGACCCACCTACAGAG...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313669.12
CDS-3UTR GCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCTGGATCCCAATCATGTaGTCCAGGATGAGGACTCGC +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVWIPIM*SRMRTR
Trigger: GCGAGTCCTCATCCTGGAGCACATGATTGGGATCCA...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCGGGCTTGCTGTGTCATaGAAAAGTAGCAAACCTATA +
Preference number: 4 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPGLAVS*KSSKPI
Trigger: TATAGGTTTGCTACTTTTGCATGACACAGCAAGCCC...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGGAGGCCAGGGGATCGTaGATCCCAATCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGEARGS*IPIMCS
Trigger: GGAGCACATGATTGGGATCCACGATCCCCTGGCCTC...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGATGCCTATCTGGTTTaGTGGACACTTGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVDAYLV*WTLAPP
Trigger: TGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGTTGCAAAGGGGACACTaGGCTTGCTGTGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASELQRGH*ACCVMQ
Trigger: TTGCATGACACAGCAAGCCCAGTGTCCCCTTTGCAA...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGATGCCCATGAAATGCTaGCTCCCCTGGCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGMPMKC*LPWLRD
Trigger: ATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCAT...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCCCTCTCTGCAGCTTaGAAAGGGGACACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGSLSAA*KGDTGL
Trigger: AAGCCCAGTGTCCCCTTTGCAAGCTGCAGAGAGGGA...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR TCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGCCGTATGGCTGGCAGTaGTTTATTCAGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGPYGWQ*FIQGLP
Trigger: AGGGAGACCCTGAATAAATCACTGCCAGCCATACGG...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGCACTTGCACCCCCAATaGTTCTCTCTCAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGHLHPQ*FSLKVL
Trigger: GAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTG...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR GCA 90 bp CCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTCTCCCTGGCCTCTGAGGGGCTTGCTGTGTCATaGAAAAGTAGCAAACCTATA +
Preference number: 4 (lower is better)
Translates to: PQVRMAGSDLFRVSLASEGLAVS*KSSKPI
Trigger: TATAGGTTTGCTACTTTTGCATGACACAGCAAGCCC...CTCAGAGGCCAGGGAGACCCTGAATAAATCACTGCCAGCCATACGGACTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGGTAACGAAAGTTCCCTaGACAGGGCCAGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGVTKVP*TGPVTA
Trigger: TGCTGTAACTGGCCCTGTCCAGGGAACTTTCGTTAC...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCGTCCTCAAGTCCGTATaGCTGGCAGTGATTTATTCA +
Preference number: 4 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVVLKSV*LAVIYS
Trigger: TGAATAAATCACTGCCAGCCATACGGACTTGAGGAC...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CCA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTTGCAAAGGGGACACTaGGCTTGCTGTGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGLQRGH*ACCVMQ
Trigger: TTGCATGACACAGCAAGCCCAGTGTCCCCTTTGCAA...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CCA 90 bp CGTGCTGCTGCAGAGCTGCGGCCGAGAAGGGATAGAGGAAGCCGGTaGCCAGCGCCGACCCGCAGAGGCAGCAACACGCCCAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: RAAAELRPRRDRGSR*PAPTRRGSNTPRAG
Trigger: TCCTGCCCTGGGCGTGTTGCTGCCTCTGCGGGTCGGCGCTGGCCACCGGCTTCCTCTATCCCTTCTCGGCCGCAGCTCTGCAGCAGCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CCA 90 bp AGGTTGGCGCAGGGCCCCGGCCACCGGCAGCTCTGGTACACGCGCTaGACCACCGTCTCCGAGCCATTCTGCACCTGGCAGGACACCGTC +
Preference number: 5 (lower is better)
Translates to: RLAQGPGHRQLWYTR*TTVSEPFCTWQDTV
Trigger: GACGGTGTCCTGCCAGGTGCAGAATGGCTCGGAGACGGTGGTCCAGCGCGTGTACCAGAGCTGCCGGTGGCCGGGGCCCTGCGCCAACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS TCA 90 bp GGGGGCCCGGCTGGGCCCGTGGGCCTTCTCTGTCGTGGCACAGGGTaGGCAAGAGGGATGGCGTCGGGGAGGAAGTCCTCATTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: GGPAGPVGLLCRGTG*ARGMASGRKSSFQV
Trigger: GACCTGGAATGAGGACTTCCTCCCCGACGCCATCCCTCTTGCTCACCCTGTGCCACGACAGAGAAGGCCCACGGGCCCAGCCGGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CCA 90 bp AGAGTCCTTACGAGGTTGGCGCAGGGCCCCGGCCACCGGCAGCTCTaGTACACGCGCTGGACCACCGTCTCCGAGCCATTCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: RVLTRLAQGPGHRQL*YTRWTTVSEPFCTW
Trigger: CCAGGTGCAGAATGGCTCGGAGACGGTGGTCCAGCGCGTGTACCAGAGCTGCCGGTGGCCGGGGCCCTGCGCCAACCTCGTAAGGACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613501.1
CDS CCA 90 bp GGCCCGTGGGCCTTCTCTGTCGTGGCACAGGGTGAGCAAGAGGGATaGCGTCGGGGAGGAAGTCCTCATTCCAGGTCGGCGGAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: GPWAFSVVAQGEQEG*RRGGSPHSRSAECS
Trigger: AGAGCACTCCGCCGACCTGGAATGAGGACTTCCTCCCCGACGCCATCCCTCTTGCTCACCCTGTGCCACGACAGAGAAGGCCCACGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CCA 90 bp TGTCCAGGGTCGGGCCCAAGCAGGGCAGCAAGGACCCCATCGGGTTaGGCGCCACCCCTCTTCATCTTGAGGTTGGCTCTCAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: CPGSGPSRAARTPSG*APPLFILRLALRAA
Trigger: TGCTGCCCTGAGAGCCAACCTCAAGATGAAGAGGGGTGGCGCCCAACCCGATGGGGTCCTTGCTGCCCTGCTTGGGCCCGACCCTGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS CCA 90 bp ACAGGGTGTCCTGGAGCAGTGGGCTCTCACTTCCTGCTGCTGGCCTaGTCCACGCTCTTCTGTCCAGGGTCGGGCCCAAGCAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: TGCPGAVGSHFLLLA*STLFCPGSGPSRAA
Trigger: TGCTGCCCTGCTTGGGCCCGACCCTGGACAGAAGAGCGTGGACCAGGCCAGCAGCAGGAAGTGAGAGCCCACTGCTCCAGGACACCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS-3UTR CAA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCGGGGCTGGCAGGTCGTaGTCCGGGCTGGAGGGCCGT +
Preference number: 5 (lower is better)
Translates to: QRLQVPPLIDMPMKCCLPGAGRS*SGLEGR
Trigger: ACGGCCCTCCAGCCCGGACAACGACCTGCCAGCCCC...GGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACATGGCTTCAGGAACTGAGGGTCCGCCCTGGGGGCTGTTaGGTGAGGGGCCTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: RRGEAGRVERTWLQELRVRPGGC*VRGLGC
Trigger: GCAACCCAGGCCCCTCACCAAACAGCCCCCAGGGCG...GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GGGACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCCGCCCTGGGGGCTGTTaGGTGAGGGGCCTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: GTRPQPNRSTKSTGDSHSRPGGC*VRGLGC
Trigger: GCAACCCAGGCCCCTCACCAAACAGCCCCCAGGGCG...GGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCAGAGTCCTTACGAGGTaGGCGCAGGGCCCCGGCCAC +
Preference number: 5 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPRVLTR*AQGPGH
Trigger: GTGGCCGGGGCCCTGCGCCAACCTCGTAAGGACTCT...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613501.1
CDS-3UTR CAA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGCTCTGATGAGGGTGTaGGCCCCTCCAGACCCTGCC +
Preference number: 5 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGALMRV*APPDPA
Trigger: GGCAGGGTCTGGAGGGGCCAACACCCTCATCAGAGC...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS TCA 90 bp CTGGGGAGGCCAGGGGATCGTGGATCCCAATCATGTGCTCCAGGATaGGGACTCGCTCTGCCAGGATCTTCAGGGCCTCTCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LGRPGDRGSQSCAPG*GLALPGSSGPLSAA
Trigger: AGCAGCTGAGAGAGGCCCTGAAGATCCTGGCAGAGCGAGTCCTCATCCTGGAGCACATGATTGGGATCCACGATCCCCTGGCCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS CCA 90 bp TTCACCCTAAGAAGCAAGTCACACAGTCAACACTGGAACGGGAGGTaGGGGCACCTCTCCACCCTCTCCAGTTCCCTGGGGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FTLRSKSHSQHWNGR*GHLSTLSSSLGACR
Trigger: CCTGCAGGCCCCCAGGGAACTGGAGAGGGTGGAGAGGTGCCCCCACCTCCCGTTCCAGTGTTGACTGTGTGACTTGCTTCTTAGGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613091.1
CDS-3UTR CAA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCCCACCCCTCTTCATCTaGAGGTTGGCTCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPPPLFI*RLALRA
Trigger: TGCCCTGAGAGCCAACCTCAAGATGAAGAGGGGTGG...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GGTGGGCTCAGCAAGACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTTCTAGCAGGAGGACCTaGGCCTCCAGTGTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: GGLSKTGRQWPGMPIWFGSSRRT*ASSVVS
Trigger: ACTGACCACACTGGAGGCCAAGGTCCTCCTGCTAGA...ACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGTCTTGCTGAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCTCTAGCAGGAGGACCTaGGCCTCCAGTGTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPSSRRT*ASSVVS
Trigger: ACTGACCACACTGGAGGCCAAGGTCCTCCTGCTAGA...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCAAGGACCCCATCGGGTaGGGCGCCACCCCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: GVPRALETVTPAVKTECPKDPIG*GATPLH
Trigger: ATGAAGAGGGGTGGCGCCCAACCCGATGGGGTCCTT...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS TCA 90 bp GGAGGACCTTGGCCTCCAGTGTGGTCAGTCGCTCACTCATGTCACTaGGCCGGGTGCAGTTCATGCATTCCTCATCACAGTTGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: GGPWPPVWSVAHSCH*AGCSSCIPHHSCSR
Trigger: CCGGGAGCAACTGTGATGAGGAATGCATGAACTGCACCCGGCTCAGTGACATGAGTGAGCGACTGACCACACTGGAGGCCAAGGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp ACTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCTCTTCATCTTGAGGTaGGCTCTCAGGGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: TGRQWPGMPIWFGGHLHPLFILR*ALRAAS
Trigger: GGATGCTGCCCTGAGAGCCAACCTCAAGATGAAGAG...GGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CGAAGAGGGGAAGCTGGCAGGGTCGAGAGAACATGGCTTCAGGAACTGAGGGTCTTCCCTCTCTGCAGCTaGCAAAGGGGACACTGGGCT +
Preference number: 5 (lower is better)
Translates to: RRGEAGRVERTWLQELRVFPLCS*QRGHWA
Trigger: AGCCCAGTGTCCCCTTTGCAAGCTGCAGAGAGGGAA...GACCCTCAGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCCTCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CTGGGAGGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCTTCAATTCTCTGAGTTaGCTGCCGTGGCTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: LGGSGQGCLSGLVDTCTPFNSLS*LPWLCP
Trigger: GGGACACAGCCACGGCAGCAAACTCAGAGAATTGAA...GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCCATTCCTCATCACAGTaGCTCCCGGTGAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCHSSSQ*LPVKPG
Trigger: CCCTGGCTTCACCGGGAGCAACTGTGATGAGGAATG...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGCATTCCTCATCACAGTaGCTCCCGGTGAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMHSSSQ*LPVKPG
Trigger: CCCTGGCTTCACCGGGAGCAACTGTGATGAGGAATG...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GGCAGTGGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTGAGTCTCCATTGTCTTaGTCTGTAGGCGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GSGQGCLSGLVDTCTPNAESPLS*SVGGCR
Trigger: CCTGCAGCCGCCTACAGACAAAGACAATGGAGACTC...AGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCCACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCAAGGACCCCATCGGGTaGGGCGCCACCCCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVKDPIG*GATPLH
Trigger: ATGAAGAGGGGTGGCGCCCAACCCGATGGGGTCCTT...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGAGTCTCCATTGTCTTaGTCTGTAGGCGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMESPLS*SVGGCR
Trigger: CCTGCAGCCGCCTACAGACAAAGACAATGGAGACTC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATGGATGCCTATCTGGTTaGGTGGACACTTGCACCCCC +
Preference number: 5 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDGCLSG*VDTCTP
Trigger: GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCC...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp ACCAGGCCACAGCCAAACAGGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCAGCCTTGAGTCTCCATaGTCTTTGTCTGTAGGCGGC +
Preference number: 5 (lower is better)
Translates to: TRPQPNRSTKSTGDSHSCSLESP*SLSVGG
Trigger: GCCGCCTACAGACAAAGACAATGGAGACTCAAGGCT...GCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCCTGTTTGGCTGTGGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCAGCCTTGAGTCTCCATaGTCTTTGTCTGTAGGCGGC +
Preference number: 5 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLSLESP*SLSVGG
Trigger: GCCGCCTACAGACAAAGACAATGGAGACTCAAGGCT...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CAGAGGCTGCAAGTCCCACCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCAGAGGCCAGCCTaGAGTCTCCATTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: QRLQVPPLIDMPMKCCLPWQRPA*SLHCLC
Trigger: ACAAAGACAATGGAGACTCAAGGCTGGCCTCTGCCA...GGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGGTGGGACTTGCAGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATCTCTTCATCTTGAGGTaGGCTCTCAGGGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDLFILR*ALRAAS
Trigger: GGATGCTGCCCTGAGAGCCAACCTCAAGATGAAGAG...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCCACCCCTCTTCATCTaGAGGTTGGCTCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVPPLFI*RLALRA
Trigger: TGCCCTGAGAGCCAACCTCAAGATGAAGAGGGGTGG...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GGAGTACCAAGAGCACTGGAGACAGTCACTCCTGCTGTGAAGACAGAGTGCCCCTGGTTTGGTGGACACTaGCACCCCCAATGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GVPRALETVTPAVKTECPWFGGH*HPQCFS
Trigger: AGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCA...GGGGCACTCTGTCTTCACAGCAGGAGTGACTGTCTCCAGTGCTCTTGGTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GGCCAGGGATGCCTATCTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCAAGGGGACACTGGGCTaGCTGTGTCATGCAAAAGTA +
Preference number: 5 (lower is better)
Translates to: GQGCLSGLVDTCTPNASLKGTLG*LCHAKV
Trigger: TACTTTTGCATGACACAGCAAGCCCAGTGTCCCCTT...GAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCCCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCTGGCAGAGGCCAGCCTaGAGTCTCCATTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVWQRPA*SLHCLC
Trigger: ACAAAGACAATGGAGACTCAAGGCTGGCCTCTGCCA...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CTGGTTTGGTGGACACTTGCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCTGGTTTGGTGGACACTaGCACCCCCAATGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LVWWTLAPPMLLSQGPQVWFGGH*HPQCFS
Trigger: AGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCA...GACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGCAAGTGTCCACCAAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGGGATGCCTATCTGGTTaGGTGGACACTTGCACCCCC +
Preference number: 5 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGGCLSG*VDTCTP
Trigger: GGGGGTGCAAGTGTCCACCAAACCAGATAGGCATCC...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp GCACCCCCAATGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATAAGGGGACACTGGGCTaGCTGTGTCATGCAAAAGTA +
Preference number: 5 (lower is better)
Translates to: APPMLLSQGPQVRMAGSDKGTLG*LCHAKV
Trigger: TACTTTTGCATGACACAGCAAGCCCAGTGTCCCCTT...ATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCATTGGGGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTTCCCTCTCTGCAGCTaGCAAAGGGGACACTGGGCT +
Preference number: 5 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGFPLCS*QRGHWA
Trigger: AGCCCAGTGTCCCCTTTGCAAGCTGCAGAGAGGGAA...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGTTCAATTCTCTGAGTTaGCTGCCGTGGCTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGFNSLS*LPWLCP
Trigger: GGGACACAGCCACGGCAGCAAACTCAGAGAATTGAA...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp CCTCTGATAGACATGCCCATGAAATGCTGCCTCCCCTGGCTCAGGGATGGGATGGGGAGAGCACCTTTATaGTCACATATAATAATAACG +
Preference number: 5 (lower is better)
Translates to: PLIDMPMKCCLPWLRDGMGRAPL*SHIIIT
Trigger: CGTTATTATTATATGTGACAATAAAGGTGCTCTCCC...CATCCCATCCCTGAGCCAGGGGAGGCAGCATTTCATGGGCATGTCTATCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS-3UTR CAA 90 bp TGCTTCTCTCTCAAGGTCCTCAAGTCCGTATGGCTGGCAGTGATTTATTCAGGGGGGAGAGCACCTTTATaGTCACATATAATAATAACG +
Preference number: 5 (lower is better)
Translates to: CFSLKVLKSVWLAVIYSGGRAPL*SHIIIT
Trigger: CGTTATTATTATATGTGACAATAAAGGTGCTCTCCC...CCCTGAATAAATCACTGCCAGCCATACGGACTTGAGGACCTTGAGAGAGAAGCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CCA 72 bp CGGGGGCCCGGCTGGGCCCGTGGGCCTTCTCTGTCGTaGCACAGGGTGAGCAAGAGGGATGGCGTCGGGGAG +
Preference number: 6 (lower is better)
Translates to: RGPGWARGPSLS*HRVSKRDGVGE
Trigger: CTCCCCGACGCCATCCCTCTTGCTCACCCTGTGCCACGACAGAGAAGGCCCACGGGCCCAGCCGGGCCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CCA 72 bp CAGGGCCCCGGCCACCGGCAGCTCTGGTACACGCGCTaGACCACCGTCTCCGAGCCATTCTGCACCTGGCAG +
Preference number: 6 (lower is better)
Translates to: QGPGHRQLWYTR*TTVSEPFCTWQ
Trigger: CTGCCAGGTGCAGAATGGCTCGGAGACGGTGGTCCAGCGCGTGTACCAGAGCTGCCGGTGGCCGGGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CCA 72 bp ACGAGGTTGGCGCAGGGCCCCGGCCACCGGCAGCTCTaGTACACGCGCTGGACCACCGTCTCCGAGCCATTC +
Preference number: 6 (lower is better)
Translates to: TRLAQGPGHRQL*YTRWTTVSEPF
Trigger: GAATGGCTCGGAGACGGTGGTCCAGCGCGTGTACCAGAGCTGCCGGTGGCCGGGGCCCTGCGCCAACCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CCA 72 bp GTCCTCATTCCAGGTCGGCGGAGTGCTCTCGGGGGCTaGCAGGTCGTTGTCCGGGCTGGAGGGCCGTTCTGC +
Preference number: 6 (lower is better)
Translates to: VLIPGRRSALGG*QVVVRAGGPFC
Trigger: GCAGAACGGCCCTCCAGCCCGGACAACGACCTGCCAGCCCCCGAGAGCACTCCGCCGACCTGGAATGAGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CAA 90 bp CTGTCCAGGGTCGGGCCCAAGCAGGGCAGCAAGGACCCCATCGGGTaGGGCGCCACCCCTCTTCATCTTGAGGTTGGCTCTCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LSRVGPKQGSKDPIG*GATPLHLEVGSQGS
Trigger: GCTGCCCTGAGAGCCAACCTCAAGATGAAGAGGGGTGGCGCCCAACCCGATGGGGTCCTTGCTGCCCTGCTTGGGCCCGACCCTGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS CCA 72 bp GAGTGCTCTCGGGGGCTGGCAGGTCGTTGTCCGGGCTaGAGGGCCGTTCTGCTGCTTCTAGCAGGAGGACCT +
Preference number: 6 (lower is better)
Translates to: ECSRGLAGRCPG*RAVLLLLAGGP
Trigger: AGGTCCTCCTGCTAGAAGCAGCAGAACGGCCCTCCAGCCCGGACAACGACCTGCCAGCCCCCGAGAGCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS GCA 72 bp CAGGGTGTCCTGGAGCAGTGGGCTCTCACTTCCTGCTaGTGGCCTGGTCCACGCTCTTCTGTCCAGGGTCGG +
Preference number: 6 (lower is better)
Translates to: QGVLEQWALTSC*WPGPRSSVQGR
Trigger: CCGACCCTGGACAGAAGAGCGTGGACCAGGCCAGCAGCAGGAAGTGAGAGCCCACTGCTCCAGGACACCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS CCA 72 bp TCGGGCCCAAGCAGGGCAGCAAGGACCCCATCGGGTTaGGCGCCACCCCTCTTCATCTTGAGGTTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: SGPSRAARTPSG*APPLFILRLAL
Trigger: GAGAGCCAACCTCAAGATGAAGAGGGGTGGCGCCCAACCCGATGGGGTCCTTGCTGCCCTGCTTGGGCCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS CAA 72 bp GTCGGGCCCAAGCAGGGCAGCAAGGACCCCATCGGGTaGGGCGCCACCCCTCTTCATCTTGAGGTTGGCTCT +
Preference number: 6 (lower is better)
Translates to: VGPKQGSKDPIG*GATPLHLEVGS
Trigger: AGAGCCAACCTCAAGATGAAGAGGGGTGGCGCCCAACCCGATGGGGTCCTTGCTGCCCTGCTTGGGCCCGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS CCA 72 bp GCCTTCTCTGTCGTGGCACAGGGTGAGCAAGAGGGATaGCGTCGGGGAGGAAGTCCTCATTCCAGGTCGGCG +
Preference number: 6 (lower is better)
Translates to: AFSVVAQGEQEG*RRGGSPHSRSA
Trigger: CGCCGACCTGGAATGAGGACTTCCTCCCCGACGCCATCCCTCTTGCTCACCCTGTGCCACGACAGAGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS CAA 90 bp AGGGCAGCAAGGACCCCATCGGGTTGGGCGCCACCCCTCTTCATCTaGAGGTTGGCTCTCAGGGCAGCATCCTGGCCAGAACCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: RAARTPSGWAPPLFI*RLALRAASWPEPPS
Trigger: AGAGGGAGGTTCTGGCCAGGATGCTGCCCTGAGAGCCAACCTCAAGATGAAGAGGGGTGGCGCCCAACCCGATGGGGTCCTTGCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS CCA 72 bp CTCTTCATCTTGAGGTTGGCTCTCAGGGCAGCATCCTaGCCAGAACCTCCCTCTGGGGAGGCCAGGGGATCG +
Preference number: 6 (lower is better)
Translates to: LFILRLALRAAS*PEPPSGEARGS
Trigger: CGATCCCCTGGCCTCCCCAGAGGGAGGTTCTGGCCAGGATGCTGCCCTGAGAGCCAACCTCAAGATGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS TCA 72 bp CCAGGGGATCGTGGATCCCAATCATGTGCTCCAGGATaGGGACTCGCTCTGCCAGGATCTTCAGGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: PGDRGSQSCAPG*GLALPGSSGPL
Trigger: GAGAGGCCCTGAAGATCCTGGCAGAGCGAGTCCTCATCCTGGAGCACATGATTGGGATCCACGATCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS GCA 72 bp TCTGGGGAGGCCAGGGGATCGTGGATCCCAATCATGTaGTCCAGGATGAGGACTCGCTCTGCCAGGATCTTC +
Preference number: 6 (lower is better)
Translates to: SGEARGSWIPIM*SRMRTRSARIF
Trigger: GAAGATCCTGGCAGAGCGAGTCCTCATCCTGGAGCACATGATTGGGATCCACGATCCCCTGGCCTCCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313669.12
ENST00000613091.1
ENST00000613501.1
CDS TCA 72 bp TGCAGTTCATGCATTCCTCATCACAGTTGCTCCCGGTaGAGCCAGGGCAGCATCTCCACTCCAGCACCGTCA +
Preference number: 6 (lower is better)
Translates to: CSSCIPHHSCSR*SQGSISTPAPS
Trigger: TGACGGTGCTGGAGTGGAGATGCTGCCCTGGCTTCACCGGGAGCAACTGTGATGAGGAATGCATGAACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1
CDS TCA 72 bp TGGCCTCCAGTGTGGTCAGTCGCTCACTCATGTCACTaGGCCGGGTGCAGTTCATGCATTCCTCATCACAGT +
Preference number: 6 (lower is better)
Translates to: WPPVWSVAHSCH*AGCSSCIPHHS
Trigger: ACTGTGATGAGGAATGCATGAACTGCACCCGGCTCAGTGACATGAGTGAGCGACTGACCACACTGGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313669.12
ENST00000613501.1