Pregenerated sensors for COL25A1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000246774Ensembl transcript IDs: ENST00000500526.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTTGGACCCAGTGACCTGCATCTCTGGGGACAGTCCACCCTCCAGTaGTCCCCACCACAGATTGGACAGGGTCGAGCTGGCTTCCTCATG | + |
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Preference number: 5 (lower is better) Translates to: FGPSDLHLWGQSTLQ*SPPQIGQGRAGFLM Trigger: CATGAGGAAGCCAGCTCGACCCTGTCCAATCTGTGGTGGGGACCACTGGAGGGTGGACTGTCCCCAGAGATGCAGGTCACTGGGTCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 90 bp | CAGTGGCTTCTTCACTCCTCAGACGTCGGCCAGACACTTTGCCTCTaGGCATGTGGGAAAGTGAGGGAGGAGGGAAAAGCGCTGCACCAC | + |
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Preference number: 5 (lower is better) Translates to: QWLLHSSDVGQTLCL*ACGKVREEGKALHH Trigger: GTGGTGCAGCGCTTTTCCCTCCTCCCTCACTTTCCCACATGCCCAGAGGCAAAGTGTCTGGCCGACGTCTGAGGAGTGAAGAAGCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 90 bp | GATGGTAATGGCAGTCTGAGCTGTCAGAGCCAGGGACAGGAGCCCTaGGGCCCATCAATCCTGTTAGACACTTGTGAGACTGGCTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: DGNGSLSCQSQGQEP*GPSILLDTCETGFG Trigger: TCCAAAGCCAGTCTCACAAGTGTCTAACAGGATTGATGGGCCCCAGGGCTCCTGTCCCTGGCTCTGACAGCTCAGACTGCCATTACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 90 bp | CTGCACCACAGCGAGATAGCAACAGCTCCTGCGGCTGCTTTTGAGTaGAGATCAGTAGAGATAGAGCGTGCCGCTTCACATCTTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LHHSEIATAPAAAFE*RSVEIERAASHLPP Trigger: GGGAGGAAGATGTGAAGCGGCACGCTCTATCTCTACTGATCTTCACTCAAAAGCAGCCGCAGGAGCTGTTGCTATCTCGCTGTGGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 90 bp | AGCGCTGCACCACAGCGAGATAGCAACAGCTCCTGCGGCTGCTTTTaGGTGAAGATCAGTAGAGATAGAGCGTGCCGCTTCACATCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SAAPQRDSNSSCGCF*VKISRDRACRFTSS Trigger: GGAAGATGTGAAGCGGCACGCTCTATCTCTACTGATCTTCACTCAAAAGCAGCCGCAGGAGCTGTTGCTATCTCGCTGTGGTGCAGCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 90 bp | ATGTTGCAGCTTCTTTACTCCCATAGTTCGGTGAGTGAGAGGGAGTaGCTCCCAGTGGCTTCTTCACTCCTCAGACGTCGGCCAGACACT | + |
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Preference number: 5 (lower is better) Translates to: MLQLLYSHSSVSERE*LPVASSLLRRRPDT Trigger: AGTGTCTGGCCGACGTCTGAGGAGTGAAGAAGCCACTGGGAGCCACTCCCTCTCACTCACCGAACTATGGGAGTAAAGAAGCTGCAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 90 bp | AAGGGAAGAAGGGAGGCCTGGATTGGAGAGGAGAATAGAAATGGCTaGTCTGCTATCCAGGAAGAAGTTCACCTTCCTCCCTTTGACCTC | + |
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Preference number: 5 (lower is better) Translates to: KGRREAWIGEENRNG*SAIQEEVHLPPFDL Trigger: GAGGTCAAAGGGAGGAAGGTGAACTTCTTCCTGGATAGCAGAGCAGCCATTTCTATTCTCCTCTCCAATCCAGGCCTCCCTTCTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 90 bp | GGTGGTTGTGGCTCAGCCAATTTTCCCTTGAATTGCCCAAATTTCTaGATTGATATCAGTCTCCACCAGGGGGAGGCAAGGAGTGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GGCGSANFPLNCPNF*IDISLHQGEARSVS Trigger: GGACACACTCCTTGCCTCCCCCTGGTGGAGACTGATATCAATCCAGAAATTTGGGCAATTCAAGGGAAAATTGGCTGAGCCACAACCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 90 bp | TTGTGGCTCAGCCAATTTTCCCTTGAATTGCCCAAATTTCTGGATTaGTATCAGTCTCCACCAGGGGGAGGCAAGGAGTGTGTCCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LWLSQFSLELPKFLD*YQSPPGGGKECVLE Trigger: CTCCAGGACACACTCCTTGCCTCCCCCTGGTGGAGACTGATATCAATCCAGAAATTTGGGCAATTCAAGGGAAAATTGGCTGAGCCACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 90 bp | TGGATCCAGATCAGTATGGTGGTTGTGGCTCAGCCAATTTTCCCTTaGATTGCCCAAATTTCTGGATTGATATCAGTCTCCACCAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: WIQISMVVVAQPIFP*IAQISGLISVSTRG Trigger: CCCCCTGGTGGAGACTGATATCAATCCAGAAATTTGGGCAATTCAAGGGAAAATTGGCTGAGCCACAACCACCATACTGATCTGGATCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 90 bp | GCCAGGCTTCTCCATCCTGCTGCTTATAACCTGGCCAAGCCCTTGTaGAAAGGAATATACAGCATTTTCTCTTCAGAATCTGCAGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: ARLLHPAAYNLAKPL*KGIYSIFSSESAGQ Trigger: TTGACCTGCAGATTCTGAAGAGAAAATGCTGTATATTCCTTTGCACAAGGGCTTGGCCAGGTTATAAGCAGCAGGATGGAGAAGCCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 90 bp | ACTCTAGAGGAGTGCAGGCTGAAAATAGTTTGTTACCCATCCTTCTaGAGACCTGGACGAGCCTCCAGAAATGTTGCAGCTTCTTTACTC | + |
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Preference number: 5 (lower is better) Translates to: TLEECRLKIVCYPSF*RPGRASRNVAASLL Trigger: GAGTAAAGAAGCTGCAACATTTCTGGAGGCTCGTCCAGGTCTTCAGAAGGATGGGTAACAAACTATTTTCAGCCTGCACTCCTCTAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 90 bp | GGAGTGCAGGCTGAAAATAGTTTGTTACCCATCCTTCTGAAGACCTaGACGAGCCTCCAGAAATGTTGCAGCTTCTTTACTCCCATAGTT | + |
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Preference number: 5 (lower is better) Translates to: GVQAENSLLPILLKT*TSLQKCCSFFTPIV Trigger: AACTATGGGAGTAAAGAAGCTGCAACATTTCTGGAGGCTCGTCCAGGTCTTCAGAAGGATGGGTAACAAACTATTTTCAGCCTGCACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 90 bp | TTTCTGTCTTTTTCTTGCATATCCTCTCCCTTTCTTGGCACTGTATaGGATACAAAGCTCATCCACAAACTTCTCTGCTGCTTGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: FLSFSCISSPFLGTV*DTKLIHKLLCCLQG Trigger: GCCCTGCAAGCAGCAGAGAAGTTTGTGGATGAGCTTTGTATCTCATACAGTGCCAAGAAAGGGAGAGGATATGCAAGAAAAAGACAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 90 bp | CAGGCTGGATCTATCCTACAATATCAGCAAAGGTCCAGATTATCCTaGAAGGCAAAGAAAACCTGCATGTATGAGACCTCAGACCATTTG | + |
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Preference number: 5 (lower is better) Translates to: QAGSILQYQQRSRLS*KAKKTCMYETSDHL Trigger: CAAATGGTCTGAGGTCTCATACATGCAGGTTTTCTTTGCCTTGCAGGATAATCTGGACCTTTGCTGATATTGTAGGATAGATCCAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 90 bp | ATACAGCATTTTCTCTTCAGAATCTGCAGGTCAAAGGATTCCCAGTaGTTCAGGATGCACTCTAGAGGAGTGCAGGCTGAAAATAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: IQHFLFRICRSKDSQ*FRMHSRGVQAENSL Trigger: CAAACTATTTTCAGCCTGCACTCCTCTAGAGTGCATCCTGAATCACTGGGAATCCTTTGACCTGCAGATTCTGAAGAGAAAATGCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 90 bp | CAATATCAGCAAAGGTCCAGATTATCCTGCAAGGCAAAGAAAACCTaGATGTATGAGACCTCAGACCATTTGCCTCCATGTTTACAGAAA | + |
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Preference number: 5 (lower is better) Translates to: QYQQRSRLSCKAKKT*MYETSDHLPPCLQK Trigger: TTTCTGTAAACATGGAGGCAAATGGTCTGAGGTCTCATACATGCAGGTTTTCTTTGCCTTGCAGGATAATCTGGACCTTTGCTGATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 90 bp | AACATAACATCCTTCCAGGAGAGTTCAAATACTTGGTTTAAATTCTaGAAAGCCTCTGTATACCCTTCAGGGTCATCTGAAAACTTACCA | + |
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Preference number: 5 (lower is better) Translates to: NITSFQESSNTWFKF*KASVYPSGSSENLP Trigger: TGGTAAGTTTTCAGATGACCCTGAAGGGTATACAGAGGCTTTCCAGAATTTAAACCAAGTATTTGAACTCTCCTGGAAGGATGTTATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | AAAGGGGGCGCTGGGCTGAGTCAGTATAAGCCAAAGTaGCCGCCTCTTGCGCAGCCGACCCCGCTTCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: KGGAGLSQYKPK*PPLAQPTPLRP Trigger: GGGCCGAAGCGGGGTCGGCTGCGCAAGAGGCGGCAACTTTGGCTTATACTGACTCAGCCCAGCGCCCCCTTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | GGGACAGTCCACCCTCCAGTGGTCCCCACCACAGATTaGACAGGGTCGAGCTGGCTTCCTCATGCTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GTVHPPVVPTTD*TGSSWLPHAAW Trigger: CCAGGCAGCATGAGGAAGCCAGCTCGACCCTGTCCAATCTGTGGTGGGGACCACTGGAGGGTGGACTGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | GGGGACAGTCCACCCTCCAGTGGTCCCCACCACAGATaGGACAGGGTCGAGCTGGCTTCCTCATGCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GDSPPSSGPHHR*DRVELASSCCL Trigger: CAGGCAGCATGAGGAAGCCAGCTCGACCCTGTCCAATCTGTGGTGGGGACCACTGGAGGGTGGACTGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | TGTGAGACTGGCTTTGGACCCAGTGACCTGCATCTCTaGGGACAGTCCACCCTCCAGTGGTCCCCACCACAG | + |
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Preference number: 6 (lower is better) Translates to: CETGFGPSDLHL*GQSTLQWSPPQ Trigger: CTGTGGTGGGGACCACTGGAGGGTGGACTGTCCCCAGAGATGCAGGTCACTGGGTCCAAAGCCAGTCTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | GGCAGTCTGAGCTGTCAGAGCCAGGGACAGGAGCCCTaGGGCCCATCAATCCTGTTAGACACTTGTGAGACT | + |
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Preference number: 6 (lower is better) Translates to: GSLSCQSQGQEP*GPSILLDTCET Trigger: AGTCTCACAAGTGTCTAACAGGATTGATGGGCCCCAGGGCTCCTGTCCCTGGCTCTGACAGCTCAGACTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 72 bp | GGCATCTCTTGTAGGGCCATGAGTGAGGCTGGGACCTaGCTGAAACGAGGATTCCTAGGAGAGGACAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GISCRAMSEAGT*LKRGFLGEDKL Trigger: AAGCTTGTCCTCTCCTAGGAATCCTCGTTTCAGGCAGGTCCCAGCCTCACTCATGGCCCTACAAGAGATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | CTTCTTTACTCCCATAGTTCGGTGAGTGAGAGGGAGTaGCTCCCAGTGGCTTCTTCACTCCTCAGACGTCGG | + |
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Preference number: 6 (lower is better) Translates to: LLYSHSSVSERE*LPVASSLLRRR Trigger: CCGACGTCTGAGGAGTGAAGAAGCCACTGGGAGCCACTCCCTCTCACTCACCGAACTATGGGAGTAAAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 72 bp | CCACAGCGAGATAGCAACAGCTCCTGCGGCTGCTTTTaGGTGAAGATCAGTAGAGATAGAGCGTGCCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PQRDSNSSCGCF*VKISRDRACRF Trigger: GAAGCGGCACGCTCTATCTCTACTGATCTTCACTCAAAAGCAGCCGCAGGAGCTGTTGCTATCTCGCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 72 bp | AGGGAGGCCTGGATTGGAGAGGAGAATAGAAATGGCTaGTCTGCTATCCAGGAAGAAGTTCACCTTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: REAWIGEENRNG*SAIQEEVHLPP Trigger: GGGAGGAAGGTGAACTTCTTCCTGGATAGCAGAGCAGCCATTTCTATTCTCCTCTCCAATCCAGGCCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 72 bp | AGCGAGATAGCAACAGCTCCTGCGGCTGCTTTTGAGTaGAGATCAGTAGAGATAGAGCGTGCCGCTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: SEIATAPAAAFE*RSVEIERAASH Trigger: ATGTGAAGCGGCACGCTCTATCTCTACTGATCTTCACTCAAAAGCAGCCGCAGGAGCTGTTGCTATCTCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 72 bp | CAGAAATGTTGCAGCTTCTTTACTCCCATAGTTCGGTaGGTGAGAGGGAGTGGCTCCCAGTGGCTTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: QKCCSFFTPIVR*VRGSGSQWLLH Trigger: GTGAAGAAGCCACTGGGAGCCACTCCCTCTCACTCACCGAACTATGGGAGTAAAGAAGCTGCAACATTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | ACCCTTCATGGTCATGCTAAGGGAAGAAGGGAGGCCTaGATTGGAGAGGAGAATAGAAATGGCTGCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TLHGHAKGRREA*IGEENRNGCSA Trigger: AGCAGAGCAGCCATTTCTATTCTCCTCTCCAATCCAGGCCTCCCTTCTTCCCTTAGCATGACCATGAAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | GGCTCAGCCAATTTTCCCTTGAATTGCCCAAATTTCTaGATTGATATCAGTCTCCACCAGGGGGAGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GSANFPLNCPNF*IDISLHQGEAR Trigger: CCTTGCCTCCCCCTGGTGGAGACTGATATCAATCCAGAAATTTGGGCAATTCAAGGGAAAATTGGCTGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | CATCCTTCTGAAGACCTGGACGAGCCTCCAGAAATGTaGCAGCTTCTTTACTCCCATAGTTCGGTGAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: HPSEDLDEPPEM*QLLYSHSSVSE Trigger: CTCACTCACCGAACTATGGGAGTAAAGAAGCTGCAACATTTCTGGAGGCTCGTCCAGGTCTTCAGAAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | AGGATGCACTCTAGAGGAGTGCAGGCTGAAAATAGTTaGTTACCCATCCTTCTGAAGACCTGGACGAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RMHSRGVQAENS*LPILLKTWTSL Trigger: GAGGCTCGTCCAGGTCTTCAGAAGGATGGGTAACAAACTATTTTCAGCCTGCACTCCTCTAGAGTGCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | TTACAGAAACGGTCCAGCTGCAGGTTAGCATTAAAGTaGATACTTCCCTCCAGAGGCCAGGCTTCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: LQKRSSCRLALK*ILPSRGQASPS Trigger: GGATGGAGAAGCCTGGCCTCTGGAGGGAAGTATCAACTTTAATGCTAACCTGCAGCTGGACCGTTTCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 90 bp | GAGGCCAGGCTTCTCCATCCTGCTGCTTATAACCTGGCCAAGCCCTaGTGCAAAGGAATATACAGCATTTTCTCTTCAGAATCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: EARLLHPAAYNLAKP*CKGIYSIFSSESAG Trigger: ACCTGCAGATTCTGAAGAGAAAATGCTGTATATTCCTTTGCACAAGGGCTTGGCCAGGTTATAAGCAGCAGGATGGAGAAGCCTGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 72 bp | GAGTGCAGGCTGAAAATAGTTTGTTACCCATCCTTCTaGAGACCTGGACGAGCCTCCAGAAATGTTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: ECRLKIVCYPSF*RPGRASRNVAA Trigger: AGCTGCAACATTTCTGGAGGCTCGTCCAGGTCTTCAGAAGGATGGGTAACAAACTATTTTCAGCCTGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 72 bp | ATTCCCTGGTTTGCCACATTTGTCGCAGTTAACAGGTaGATCTTTGGGATTCTGGGGTTTGTAAGCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: IPWFATFVAVNR*IFGILGFVSLQ Trigger: CTGCAGGCTTACAAACCCCAGAATCCCAAAGATGCACCTGTTAACTGCGACAAATGTGGCAAACCAGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | GCAAAGAAAACCTGCATGTATGAGACCTCAGACCATTaGCCTCCATGTTTACAGAAACGGTCCAGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AKKTCMYETSDH*PPCLQKRSSCR Trigger: CCTGCAGCTGGACCGTTTCTGTAAACATGGAGGCAAATGGTCTGAGGTCTCATACATGCAGGTTTTCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 90 bp | TCCTGCAAGGCAAAGAAAACCTGCATGTATGAGACCTCAGACCATTaGCCTCCATGTTTACAGAAACGGTCCAGCTGCAGGTTAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: SCKAKKTCMYETSDH*PPCLQKRSSCRLAL Trigger: TAATGCTAACCTGCAGCTGGACCGTTTCTGTAAACATGGAGGCAAATGGTCTGAGGTCTCATACATGCAGGTTTTCTTTGCCTTGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 72 bp | TTTCTCTTCAGAATCTGCAGGTCAAAGGATTCCCAGTaGTTCAGGATGCACTCTAGAGGAGTGCAGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FLFRICRSKDSQ*FRMHSRGVQAE Trigger: TTCAGCCTGCACTCCTCTAGAGTGCATCCTGAATCACTGGGAATCCTTTGACCTGCAGATTCTGAAGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 72 bp | AGCCAATTTTCCCTTGAATTGCCCAAATTTCTGGATTaGTATCAGTCTCCACCAGGGGGAGGCAAGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SQFSLELPKFLD*YQSPPGGGKEC Trigger: ACACTCCTTGCCTCCCCCTGGTGGAGACTGATATCAATCCAGAAATTTGGGCAATTCAAGGGAAAATTGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 72 bp | CAAAGAAAACCTGCATGTATGAGACCTCAGACCATTTaGCTCCATGTTTACAGAAACGGTCCAGCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: QRKPACMRPQTI*LHVYRNGPAAG Trigger: ACCTGCAGCTGGACCGTTTCTGTAAACATGGAGGCAAATGGTCTGAGGTCTCATACATGCAGGTTTTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | GGGCAGTCGTTTTTAACATTCCCTGGTTTGCCACATTaGTCGCAGTTAACAGGTGCATCTTTGGGATTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GQSFLTFPGLPH*SQLTGASLGFW Trigger: CCAGAATCCCAAAGATGCACCTGTTAACTGCGACAAATGTGGCAAACCAGGGAATGTTAAAAACGACTGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 72 bp | GAATCTGCAGGTCAAAGGATTCCCAGTGATTCAGGATaGACTCTAGAGGAGTGCAGGCTGAAAATAGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ESAGQRIPSDSG*TLEECRLKIVC Trigger: ACAAACTATTTTCAGCCTGCACTCCTCTAGAGTGCATCCTGAATCACTGGGAATCCTTTGACCTGCAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 72 bp | GACCATTTGCCTCCATGTTTACAGAAACGGTCCAGCTaGAGGTTAGCATTAAAGTTGATACTTCCCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: DHLPPCLQKRSS*RLALKLILPSR Trigger: TCTGGAGGGAAGTATCAACTTTAATGCTAACCTGCAGCTGGACCGTTTCTGTAAACATGGAGGCAAATGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 72 bp | CTCCATCCTGCTGCTTATAACCTGGCCAAGCCCTTGTaGAAAGGAATATACAGCATTTTCTCTTCAGAATCT | + |
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Preference number: 6 (lower is better) Translates to: LHPAAYNLAKPL*KGIYSIFSSES Trigger: AGATTCTGAAGAGAAAATGCTGTATATTCCTTTGCACAAGGGCTTGGCCAGGTTATAAGCAGCAGGATGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 72 bp | TATGGTGGTTGTGGCTCAGCCAATTTTCCCTTGAATTaGCCAAATTTCTGGATTGATATCAGTCTCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: YGGCGSANFPLN*PNFWIDISLHQ Trigger: CTGGTGGAGACTGATATCAATCCAGAAATTTGGGCAATTCAAGGGAAAATTGGCTGAGCCACAACCACCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | GCTGAAAATAGTTTGTTACCCATCCTTCTGAAGACCTaGACGAGCCTCCAGAAATGTTGCAGCTTCTTTACT | + |
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Preference number: 6 (lower is better) Translates to: AENSLLPILLKT*TSLQKCCSFFT Trigger: AGTAAAGAAGCTGCAACATTTCTGGAGGCTCGTCCAGGTCTTCAGAAGGATGGGTAACAAACTATTTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | CTTCTCCATCCTGCTGCTTATAACCTGGCCAAGCCCTaGTGCAAAGGAATATACAGCATTTTCTCTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLHPAAYNLAKP*CKGIYSIFSSE Trigger: TTCTGAAGAGAAAATGCTGTATATTCCTTTGCACAAGGGCTTGGCCAGGTTATAAGCAGCAGGATGGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | CTCATCCACAAACTTCTCTGCTGCTTGCAGGGCTGTTaGCTTCTCAGTGGTAGTCAAAGTTTGATTCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LIHKLLCCLQGC*LLSGSQSLIQK Trigger: CTTTTGAATCAAACTTTGACTACCACTGAGAAGCAAACAGCCCTGCAAGCAGCAGAGAAGTTTGTGGATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS TCA 72 bp | TTTTCTTGCATATCCTCTCCCTTTCTTGGCACTGTATaGGATACAAAGCTCATCCACAAACTTCTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FSCISSPFLGTV*DTKLIHKLLCC Trigger: GCAGCAGAGAAGTTTGTGGATGAGCTTTGTATCTCATACAGTGCCAAGAAAGGGAGAGGATATGCAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CAA 72 bp | GATCAGTATGGTGGTTGTGGCTCAGCCAATTTTCCCTaGAATTGCCCAAATTTCTGGATTGATATCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: DQYGGCGSANFP*NCPNFWIDISL Trigger: GAGACTGATATCAATCCAGAAATTTGGGCAATTCAAGGGAAAATTGGCTGAGCCACAACCACCATACTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS GCA 72 bp | TCTATCCTACAATATCAGCAAAGGTCCAGATTATCCTaGAAGGCAAAGAAAACCTGCATGTATGAGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: SILQYQQRSRLS*KAKKTCMYETS Trigger: TGAGGTCTCATACATGCAGGTTTTCTTTGCCTTGCAGGATAATCTGGACCTTTGCTGATATTGTAGGATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | TCCTTCCAGGAGAGTTCAAATACTTGGTTTAAATTCTaGAAAGCCTCTGTATACCCTTCAGGGTCATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SFQESSNTWFKF*KASVYPSGSSE Trigger: TTCAGATGACCCTGAAGGGTATACAGAGGCTTTCCAGAATTTAAACCAAGTATTTGAACTCTCCTGGAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | TTTTCTGTCTTTTTCTTGCATATCCTCTCCCTTTCTTaGCACTGTATGAGATACAAAGCTCATCCACAAACT | + |
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Preference number: 6 (lower is better) Translates to: FSVFFLHILSLS*HCMRYKAHPQT Trigger: AGTTTGTGGATGAGCTTTGTATCTCATACAGTGCCAAGAAAGGGAGAGGATATGCAAGAAAAAGACAGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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| CDS CCA 72 bp | AGTAACATAACATCCTTCCAGGAGAGTTCAAATACTTaGTTTAAATTCTGGAAAGCCTCTGTATACCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SNITSFQESSNT*FKFWKASVYPS Trigger: TGAAGGGTATACAGAGGCTTTCCAGAATTTAAACCAAGTATTTGAACTCTCCTGGAAGGATGTTATGTTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500526.1 |
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