RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL25A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000188517

Ensembl transcript IDs: ENST00000399126.1, ENST00000399127.5, ENST00000399132.6, ENST00000494183.5, ENST00000505377.1, ENST00000505591.1, ENST00000512961.5, ENST00000610288.4, ENST00000622134.4, ENST00000642955.1

Found 936 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATaGGCCCACAATACTGGAAGCTGTAGATCTGCAGTCAGGACTGCA +
Preference number: 1 (lower is better)
Translates to: QQQAQPLRISTKVAT*AHNTGSCRSAVRTA
Trigger: TGCAGTCCTGACTGCAGATCTACAGCTTCCAGTATTGTGGGCTCATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR CCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTaGCCACATGAGCCCACAATACTGGAAGCTGTAGATCTGCAGTCA +
Preference number: 1 (lower is better)
Translates to: TGGSNRLNPFVFQPK*PHEPTILEAVDLQS
Trigger: TGACTGCAGATCTACAGCTTCCAGTATTGTGGGCTCATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR CCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTaGGATGGACATCCCTTTTCCCTCAGGGACAGGATCTCCCATTCC +
Preference number: 1 (lower is better)
Translates to: IPSQNMLFLQQPKFW*DGHPFSLRDRISHS
Trigger: GGAATGGGAGATCCTGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 90 bp GGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTaGAGACCTGATTCCTTAAATCAGGCATCAGTATGTTTTTGGAGC +
Preference number: 1 (lower is better)
Translates to: GSALISGSTAFFIPL*RPDSLNQASVCFWS
Trigger: GCTCCAAAAACATACTGATGCCTGATTTAAGGAATCAGGTCTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
3UTR TCA 90 bp TGTCCCAGTAAGCTCTCCTATATCATCGGGAGAGGCGATTTTGGCTaGTCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTT +
Preference number: 1 (lower is better)
Translates to: CPSKLSYIIGRGDFG*SLLRTCYFFSNPSF
Trigger: AAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGATGATATAGGAGAGCTTACTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR GCA 90 bp AGTCAGGACTGCAACTCCCTCAAAATACAAGACAAATTGTGTGTGTaGTCTCCGCCACCTTATCTCTTTTTGGCAATAAGCCATGGTGTA +
Preference number: 1 (lower is better)
Translates to: SQDCNSLKIQDKLCV*SPPPYLFLAISHGV
Trigger: TACACCATGGCTTATTGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTTGAGGGAGTTGCAGTCCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 90 bp CCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGACCTaGTTCCTTAAATCAGGCATCAGTATGTTTTTGGAGCACAGGATG +
Preference number: 1 (lower is better)
Translates to: PYIWQYSLLHSSLKT*FLKSGISMFLEHRM
Trigger: CATCCTGTGCTCCAAAAACATACTGATGCCTGATTTAAGGAATCAGGTCTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
3UTR TCA 90 bp GTGACACCTATGCATGAAACTAGAAATCTTCCCAGAAGATGGCATTaGGTCAGGAGAGAAATTAAATTCTCTAATGGGCTGAAAGGGTGC +
Preference number: 1 (lower is better)
Translates to: VTPMHETRNLPRRWH*VRREIKFSNGLKGC
Trigger: GCACCCTTTCAGCCCATTAGAGAATTTAATTTCTCTCCTGACTCAATGCCATCTTCTGGGAAGATTTCTAGTTTCATGCATAGGTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 90 bp TTAGTTAGTTTCAATGGGTGGTGTAGGTATGAGTCAACGCCGACATaGAAGGTGAATGGGAATGTGATAATCAGCTCTAAAATCAGTCAG +
Preference number: 1 (lower is better)
Translates to: LVSFNGWCRYESTPT*KVNGNVIISSKISQ
Trigger: CTGACTGATTTTAGAGCTGATTATCACATTCCCATTCACCTTTCATGTCGGCGTTGACTCATACCTACACCACCCATTGAAACTAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR GCA 90 bp CCCAATTTCAGATGTAAGTGGAGTAAAAATGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTG +
Preference number: 1 (lower is better)
Translates to: PNFRCKWSKNGHVYY*QQEEAALCKHISDL
Trigger: CAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATCTGAAATTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATCCCAAGGAAAACTGGTaGCAGCAACAGGCTCAACCC +
Preference number: 2 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHPKENW*QQQAQP
Trigger: GGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGG...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATCATGAGAGGCAGTGCTaGAGGCTGAATCGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHHERQC*RLNRSS
Trigger: AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATG...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp TTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACACAGCCCAAGGAAAACTaGTGGCAGCAACAGGCTCAA +
Preference number: 2 (lower is better)
Translates to: FFSNPSFGGMDIPFPSGTQPKEN*WQQQAQ
Trigger: TTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGCTG...TGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCCATGAGAGGCAGTGCTaGAGGCTGAATCGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCHERQC*RLNRSS
Trigger: AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATG...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTCCCATAGGGCCCTCTTaGTCCAGGCTCTCCCATAGC +
Preference number: 2 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCPIGPS*SRLSHS
Trigger: GCTATGGGAGAGCCTGGACCAAGAGGGCCCTATGGG...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
3UTR-3UTR TCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACGAGTCAACGCCGACATaGAAGGTGAATGGGAATGTG +
Preference number: 2 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDESTPT*KVNGNV
Trigger: CACATTCCCATTCACCTTTCATGTCGGCGTTGACTC...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGTCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCC +
Preference number: 2 (lower is better)
Translates to: VISSATQVLVGWTSLFPQSHERQ*WRLNRS
Trigger: GGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGA...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAACCCATAGGGCCCTCTTaGTCCAGGCTCTCCCATAGC +
Preference number: 2 (lower is better)
Translates to: TTASRKKQPYVNISQTCKPIGPS*SRLSHS
Trigger: GCTATGGGAGAGCCTGGACCAAGAGGGCCCTATGGG...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
3UTR-3UTR CCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATGCCAACAGCCAGGCATaGGTAAGCCATCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHANSQA*VSHLAP
Trigger: TGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGC...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
3UTR-3UTR TCA 90 bp TGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGTCCTACTTGGTCACATaGGAGGCAGTGCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: WLIPSQNMLFLQQPKFWWSYLVT*EAVLEA
Trigger: AGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGA...CCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACAGAGGCGATTTTGGCTaGTCCCTTCTCAGAACATGT +
Preference number: 2 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDRGDFG*SLLRTC
Trigger: ACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCT...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGTTCCCATGTCTTCACTaGCAAGGGCAGCCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLFPCLH*QGQPKE
Trigger: TTCCTTGGGCTGCCCTTGGCAGTGAAGACATGGGAA...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATTTTGGCAATAAGCCATaGTGTAACCCCCTTGAGATG +
Preference number: 2 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHFGNKP*CNPLEM
Trigger: CATCTCAAGGGGGTTACACCATGGCTTATTGCCAAA...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGATCCTACTTGGTCACATaGGAGGCAGTGCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGSYLVT*EAVLEA
Trigger: AGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGA...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAATCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCC +
Preference number: 2 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKESHERQ*WRLNRS
Trigger: GGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGA...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGATCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCC +
Preference number: 2 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGSHERQ*WRLNRS
Trigger: GGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGA...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGCATCAGTATGTTTTTaGAGCACAGGATGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKASVCF*STGWRK
Trigger: CTTTCTCCATCCTGTGCTCCAAAAACATACTGATGC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
3UTR-3UTR CCA 90 bp TTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACACACAGCAAGCAGGTTTaGCACACAGTCATGCTTTTT +
Preference number: 2 (lower is better)
Translates to: FFSNPSFGGMDIPFPSGTHSKQV*HTVMLF
Trigger: AAAAAGCATGACTGTGTGCCAAACCTGCTTGCTGTG...TGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCATTTGGCAATAAGCCATaGTGTAACCCCCTTGAGATG +
Preference number: 2 (lower is better)
Translates to: GLLINMLASEVAQQAGLAFGNKP*CNPLEM
Trigger: CATCTCAAGGGGGTTACACCATGGCTTATTGCCAAA...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp TTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACATTTGGCAATAAGCCATaGTGTAACCCCCTTGAGATG +
Preference number: 2 (lower is better)
Translates to: FFSNPSFGGMDIPFPSGTFGNKP*CNPLEM
Trigger: CATCTCAAGGGGGTTACACCATGGCTTATTGCCAAA...TGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACAGCCCAAGGAAAACTaGTGGCAGCAACAGGCTCAA +
Preference number: 2 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGQPKEN*WQQQAQ
Trigger: TTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGCTG...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGCAAGTTTTGGTGGGATaGACATCCCTTTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLQVLVG*TSLFPQ
Trigger: CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTG...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR CAA 90 bp CAGATTGTCCCAGTAAGCTCTCCTATATCATCGGGAGAGGCGATTTaGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAA +
Preference number: 2 (lower is better)
Translates to: QIVPVSSPISSGEAI*ADPFSEHVISSATQ
Trigger: TTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGATGATATAGGAGAGCTTACTGGGACAATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAGAGTCAACGCCGACATaGAAGGTGAATGGGAATGTG +
Preference number: 2 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEESTPT*KVNGNV
Trigger: CACATTCCCATTCACCTTTCATGTCGGCGTTGACTC...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCATTCCCATGTCTTCACTaGCAAGGGCAGCCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAFPCLH*QGQPKE
Trigger: TTCCTTGGGCTGCCCTTGGCAGTGAAGACATGGGAA...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGCATCAGTATGTTTTTaGAGCACAGGATGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: SSMPGSALISGSTAFFIPASVCF*STGWRK
Trigger: CTTTCTCCATCCTGTGCTCCAAAAACATACTGATGC...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
3UTR-3UTR CCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCCAAGTTTTGGTGGGATaGACATCCCTTTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPQVLVG*TSLFPQ
Trigger: CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTG...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTCCATCTGGCCCCAATTaGCAAGGGGCATCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVPSGPN*QGASSP
Trigger: TGGGCTGGATGCCCCTTGCCAATTGGGGCCAGATGG...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610288.4
3UTR-3UTR TCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCACAACATGCTAGCATCTaGAGTTGCACAGCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAQHASI*SCTASR
Trigger: CCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTG...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTACCAAAGTGGCCACATaGGCCCACAATACTGGAAGC +
Preference number: 2 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFTKVAT*AHNTGS
Trigger: GCTTCCAGTATTGTGGGCTCATGTGGCCACTTTGGT...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGGTATTTCAACCAAAGTaGCCACATGAGCCCACAATA +
Preference number: 2 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLVFQPK*PHEPTI
Trigger: TATTGTGGGCTCATGTGGCCACTTTGGTTGAAATAC...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAGAGTCAACGCCGACATaGAAGGTGAATGGGAATGTG +
Preference number: 2 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRESTPT*KVNGNV
Trigger: CACATTCCCATTCACCTTTCATGTCGGCGTTGACTC...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATCCTACTTGGTCACATaGGAGGCAGTGCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPSYLVT*EAVLEA
Trigger: AGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGA...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: KGSDVIKGLLINMLASEVGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGTCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCC +
Preference number: 2 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQSHERQ*WRLNRS
Trigger: GGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGA...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGCAACCCAAGTTTTGGTaGGATGGACATCCCTTTTCC +
Preference number: 2 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWQPKFW*DGHPFS
Trigger: GGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTG...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCAGGAAATGTTTGACATaGTTGGATCGTAGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPRKCLT*LDRRRK
Trigger: CTTCCTCCTACGATCCAACCATGTCAAACATTTCCT...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTAGAGGCGATTTTGGCTaGTCCCTTCTCAGAACATGT +
Preference number: 2 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFRGDFG*SLLRTC
Trigger: ACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCT...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTAGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAGACAAATTGTGTGTGTaGTCTCCGCCACCTTATCTC +
Preference number: 2 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRDKLCV*SPPPYL
Trigger: GAGATAAGGTGGCGGAGAGCACACACACAATTTGTC...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATGTTAGTTTCAATGGGTaGTGTAGGTATGAGTCAACG +
Preference number: 2 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHVSFNG*CRYEST
Trigger: CGTTGACTCATACCTACACCACCCATTGAAACTAAC...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATGTATTTCAACCAAAGTaGCCACATGAGCCCACAATA +
Preference number: 2 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHVFQPK*PHEPTI
Trigger: TATTGTGGGCTCATGTGGCCACTTTGGTTGAAATAC...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp GTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGCAACATGCTAGCATCTaGAGTTGCACAGCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: VSIVHFHSFESIFGHHFMQHASI*SCTASR
Trigger: CCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTG...CATGAAATGGTGACCAAATATGGACTCAAAGCTATGAAAATGTACTATACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTTTTGGCAATAAGCCATaGTGTAACCCCCTTGAGATG +
Preference number: 2 (lower is better)
Translates to: KGSDVIKGLLINMLASEVFGNKP*CNPLEM
Trigger: CATCTCAAGGGGGTTACACCATGGCTTATTGCCAAA...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAAAATTCTCTAATGGGCTaGAAGGGTGCCTACTCCTCA +
Preference number: 2 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQNSLMG*KGAYSS
Trigger: TGAGGAGTAGGCACCCTTTCAGCCCATTAGAGAATT...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAACACAACTTCATGCTTaGAAGGTTAGATTCATCACT +
Preference number: 2 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKETQLHA*KVRFIT
Trigger: AGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGT...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
3UTR-3UTR GCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCTATTCCAAAAGAAGTaGTGTGCCTCTGTCATTTTT +
Preference number: 2 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHLFQKK*CASVIF
Trigger: AAAAATGACAGAGGCACAGCACTTCTTTTGGAATAG...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTAAATGGGCTGAAAGGGTaGCTACTCCTCATTGATAAT +
Preference number: 2 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLNGLKG*LLLIDN
Trigger: ATTATCAATGAGGAGTAGGCACCCTTTCAGCCCATT...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR TCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATAATTGTGTCAGACATTaGGCAATACGTTATCCTAAC +
Preference number: 2 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINNCVRH*AIRYPN
Trigger: GTTAGGATAACGTATTGCTCAATGTCTGACACAATT...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATTTGCAGGATTCTCACTaGTTTCACAAATTGCCCAAT +
Preference number: 2 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHLQDSH*FHKLPN
Trigger: ATTGGGCAATTTGTGAAACCAGTGAGAATCCTGCAA...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CCA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAATTGCAGGATTCTCACTaGTTTCACAAATTGCCCAAT +
Preference number: 2 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQLQDSH*FHKLPN
Trigger: ATTGGGCAATTTGTGAAACCAGTGAGAATCCTGCAA...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTCTATTCCAAAAGAAGTaGTGTGCCTCTGTCATTTTT +
Preference number: 2 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVLFQKK*CASVIF
Trigger: AAAAATGACAGAGGCACAGCACTTCTTTTGGAATAG...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR GCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGCTATTCCAAAAGAAGTaGTGTGCCTCTGTCATTTTT +
Preference number: 2 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQLFQKK*CASVIF
Trigger: AAAAATGACAGAGGCACAGCACTTCTTTTGGAATAG...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR CCA 72 bp AAGGTTAGATTCATCACTTTTGCCAACAGCCAGGCATaGGTAAGCCATCTGGCCCCAACGGGCAGGGTGCAT +
Preference number: 3 (lower is better)
Translates to: KVRFITFANSQA*VSHLAPTGRVH
Trigger: ATGCACCCTGCCCGTTGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGCAAAAGTGATGAATCTAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494183.5
3UTR-3UTR CAA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACTCGGGAGAGGCGATTTaGGCTGATCCCTTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDSGEAI*ADPFSE
Trigger: TTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGA...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR GCA 72 bp GTAAACCTCTTTCCTACTTGGTCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCCTCTTCCCATGTCTTC +
Preference number: 3 (lower is better)
Translates to: VNLFPTWSHERQ*WRLNRSSSHVF
Trigger: GAAGACATGGGAAGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAGGTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR CCA 72 bp AACCTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTaGAGGCTGAATCGGTCCTCTTCCCATGTCTTCACT +
Preference number: 3 (lower is better)
Translates to: NLFPTWSHERQC*RLNRSSSHVFT
Trigger: AGTGAAGACATGGGAAGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 72 bp GCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATaGGCCCACAATACTGGAAGCTGTAGATCTGCAGTC +
Preference number: 3 (lower is better)
Translates to: AQPLRISTKVAT*AHNTGSCRSAV
Trigger: GACTGCAGATCTACAGCTTCCAGTATTGTGGGCTCATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTATCGGGAGAGGCGATTTaGGCTGATCCCTTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVSGEAI*ADPFSE
Trigger: TTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGA...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTATTTCATGGCACTTTTaGTCCATGCAATTAGCAAGC +
Preference number: 3 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSISWHF*SMQLAS
Trigger: GCTTGCTAATTGCATGGACAAAAAGTGCCATGAAAT...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTTAGATTCATCACTTTaGCCAACAGCCAGGCATGGG +
Preference number: 3 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCLDSSL*PTARHG
Trigger: CCCATGCCTGGCTGTTGGCAAAAGTGATGAATCTAA...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
3UTR-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGGCATCAGTATGTTTTaGGAGCACAGGATGGAGAAA +
Preference number: 3 (lower is better)
Translates to: SSMPGSALISGSTAFFIPGISMF*EHRMEK
Trigger: TTTCTCCATCCTGTGCTCCAAAAACATACTGATGCC...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
3UTR-3UTR CAA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAGCACAGCAAGCAGGTTaGGCACACAGTCATGCTTTT +
Preference number: 3 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEAQQAG*AHSHAF
Trigger: AAAAGCATGACTGTGTGCCAAACCTGCTTGCTGTGC...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATGCACAGCAAGCAGGTTaGGCACACAGTCATGCTTTT +
Preference number: 3 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHAQQAG*AHSHAF
Trigger: AAAAGCATGACTGTGTGCCAAACCTGCTTGCTGTGC...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTCGGGAGAGGCGATTTaGGCTGATCCCTTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWSGEAI*ADPFSE
Trigger: TTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGA...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 72 bp TGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTaGAGTTGCACAGCAAGCAGGTTTGGCACACAGTCA +
Preference number: 3 (lower is better)
Translates to: CNQRTPDQHASI*SCTASRFGTQS
Trigger: TGACTGTGTGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTGGCATCAGTATGTTTTaGGAGCACAGGATGGAGAAA +
Preference number: 3 (lower is better)
Translates to: FSSMPGSALISGSTAFFIGISMF*EHRMEK
Trigger: TTTCTCCATCCTGTGCTCCAAAAACATACTGATGCC...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
3UTR-3UTR CAA 90 bp AACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACACAGTCATGCTCACTGGTTTCACAAATaGCCCAATTTCAGATGTAAG +
Preference number: 3 (lower is better)
Translates to: NMLASEVAQQAGLAHSHAHWFHK*PNFRCK
Trigger: CTTACATCTGAAATTGGGCAATTTGTGAAACCAGTG...AGCATGACTGTGTGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGCCACCTTATCTCTTTTaGGCAATAAGCCATGGTGTA +
Preference number: 3 (lower is better)
Translates to: VISSATQVLVGWTSLFPQPPYLF*AISHGV
Trigger: TACACCATGGCTTATTGCCAAAAAGAGATAAGGTGG...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGCTTTGTAGGAAATGTTaGACATGGTTGGATCGTAGG +
Preference number: 3 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLLCRKC*TWLDRR
Trigger: CCTACGATCCAACCATGTCAAACATTTCCTACAAAG...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 72 bp AAGCTCTCCTATATCATCGGGAGAGGCGATTTTGGCTaGTCCCTTCTCAGAACATGTTATTTCTTCAGCAAC +
Preference number: 3 (lower is better)
Translates to: KLSYIIGRGDFG*SLLRTCYFFSN
Trigger: GTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGATGATATAGGAGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTTACATTTTCATAGCTTaGAGTCCATATTTGGTCACC +
Preference number: 3 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSYIFIA*SPYLVT
Trigger: GGTGACCAAATATGGACTCAAAGCTATGAAAATGTA...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTaGGCACACAGTCATGCTTTT +
Preference number: 3 (lower is better)
Translates to: KGSDVIKGLLINMLASEVAQQAG*AHSHAF
Trigger: AAAAGCATGACTGTGTGCCAAACCTGCTTGCTGTGC...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp TGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGCTTTGTAGGAAATGTTaGACATGGTTGGATCGTAGG +
Preference number: 3 (lower is better)
Translates to: WLIPSQNMLFLQQPKFWWLCRKC*TWLDRR
Trigger: CCTACGATCCAACCATGTCAAACATTTCCTACAAAG...CCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 72 bp TGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGACCTaGTTCCTTAAATCAGGCATCAGTATGTTTTTGGAG +
Preference number: 3 (lower is better)
Translates to: WQYSLLHSSLKT*FLKSGISMFLE
Trigger: CTCCAAAAACATACTGATGCCTGATTTAAGGAATCAGGTCTTCAGAGAGGAATGAAGAAGGCTGTACTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
3UTR TCA 72 bp TTCAATGGGTGGTGTAGGTATGAGTCAACGCCGACATaGAAGGTGAATGGGAATGTGATAATCAGCTCTAAA +
Preference number: 3 (lower is better)
Translates to: FNGWCRYESTPT*KVNGNVIISSK
Trigger: TTTAGAGCTGATTATCACATTCCCATTCACCTTTCATGTCGGCGTTGACTCATACCTACACCACCCATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 72 bp CTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTaGAGACCTGATTCCTTAAATCAGGCATCAGTATGT +
Preference number: 3 (lower is better)
Translates to: LISGSTAFFIPL*RPDSLNQASVC
Trigger: ACATACTGATGCCTGATTTAAGGAATCAGGTCTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
3UTR-3UTR CAA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGAATTTCATGGCACTTTTaGTCCATGCAATTAGCAAGC +
Preference number: 3 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGISWHF*SMQLAS
Trigger: GCTTGCTAATTGCATGGACAAAAAGTGCCATGAAAT...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAATTTCATGGCACTTTTaGTCCATGCAATTAGCAAGC +
Preference number: 3 (lower is better)
Translates to: DVIKGLLINMLASEVAQQISWHF*SMQLAS
Trigger: GCTTGCTAATTGCATGGACAAAAAGTGCCATGAAAT...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCACCACCTTATCTCTTTTaGGCAATAAGCCATGGTGTA +
Preference number: 3 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAPPYLF*AISHGV
Trigger: TACACCATGGCTTATTGCCAAAAAGAGATAAGGTGG...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAATCTGAGATCTTAGATTaGGTCTGTGGATATGAGGAT +
Preference number: 3 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKESEILD*VCGYED
Trigger: ATCCTCATATCCACAGACCAAATCTAAGATCTCAGA...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGATTTCATGGCACTTTTaGTCCATGCAATTAGCAAGC +
Preference number: 3 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWISWHF*SMQLAS
Trigger: GCTTGCTAATTGCATGGACAAAAAGTGCCATGAAAT...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR GCA 72 bp AGATGTAAGTGGAGTAAAAATGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCCCTATGTAAACATATC +
Preference number: 3 (lower is better)
Translates to: RCKWSKNGHVYY*QQEEAALCKHI
Trigger: GATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATCACTGGTTTCACAAATaGCCCAATTTCAGATGTAAG +
Preference number: 3 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINHWFHK*PNFRCK
Trigger: CTTACATCTGAAATTGGGCAATTTGTGAAACCAGTG...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 72 bp ATGCATGAAACTAGAAATCTTCCCAGAAGATGGCATTaGGTCAGGAGAGAAATTAAATTCTCTAATGGGCTG +
Preference number: 3 (lower is better)
Translates to: MHETRNLPRRWH*VRREIKFSNGL
Trigger: CAGCCCATTAGAGAATTTAATTTCTCTCCTGACTCAATGCCATCTTCTGGGAAGATTTCTAGTTTCATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATATTTCATGGCACTTTTaGTCCATGCAATTAGCAAGC +
Preference number: 3 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHISWHF*SMQLAS
Trigger: GCTTGCTAATTGCATGGACAAAAAGTGCCATGAAAT...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGCCACCTTATCTCTTTTaGGCAATAAGCCATGGTGTA +
Preference number: 3 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQPPYLF*AISHGV
Trigger: TACACCATGGCTTATTGCCAAAAAGAGATAAGGTGG...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGAAATGTTTGACATGGTaGGATCGTAGGAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQKCLTW*DRRRKE
Trigger: TTCCTTCCTCCTACGATCCAACCATGTCAAACATTT...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR TCA 72 bp ATTGAGTCAGGAGAGAAATTAAATTCTCTAATGGGCTaGAAGGGTGCCTACTCCTCATTGATAATGTTTCTT +
Preference number: 3 (lower is better)
Translates to: IESGEKLNSLMG*KGAYSSLIMFL
Trigger: AAGAAACATTATCAATGAGGAGTAGGCACCCTTTCAGCCCATTAGAGAATTTAATTTCTCTCCTGACTCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTCACTGGTTTCACAAATaGCCCAATTTCAGATGTAAG +
Preference number: 3 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVHWFHK*PNFRCK
Trigger: CTTACATCTGAAATTGGGCAATTTGTGAAACCAGTG...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp TGGTCACCATTTCATGTAAACTATTTCATGGCACTTTTTGTCCATGCAATTAGCTACATTTTCATAGCTTaGAGTCCATATTTGGTCACC +
Preference number: 3 (lower is better)
Translates to: WSPFHVNYFMALFVHAISYIFIA*SPYLVT
Trigger: GGTGACCAAATATGGACTCAAAGCTATGAAAATGTA...GCTAATTGCATGGACAAAAAGTGCCATGAAATAGTTTACATGAAATGGTGACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR-3UTR CAA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAATACATTTTCATAGCTTaGAGTCCATATTTGGTCACC +
Preference number: 3 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQYIFIA*SPYLVT
Trigger: GGTGACCAAATATGGACTCAAAGCTATGAAAATGTA...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR GCA 72 bp AGGAGAGAAATTAAATTCTCTAATGGGCTGAAAGGGTaGCTACTCCTCATTGATAATGTTTCTTTCAATGTA +
Preference number: 3 (lower is better)
Translates to: RREIKFSNGLKG*LLLIDNVSFNV
Trigger: TACATTGAAAGAAACATTATCAATGAGGAGTAGGCACCCTTTCAGCCCATTAGAGAATTTAATTTCTCTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR GCA 72 bp ATGTGTAAGTTCTTGCTGTCCCATCAGAACATCGTATaGACAGAATGTAAATTCAAAAACAAGACCTTTCTT +
Preference number: 3 (lower is better)
Translates to: MCKFLLSHQNIV*TECKFKNKTFL
Trigger: AAGAAAGGTCTTGTTTTTGAATTTACATTCTGTGCATACGATGTTCTGATGGGACAGCAAGAACTTACACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAACACCACGGCCACCACTaGCAGGAGGGCCGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQHHGHH*QEGRQD
Trigger: GTCCTGGCGGCCCTCCTGTCAGTGGTGGCCGTGGTG...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTTGCCAACAGCCAGGCATGGGTAAGCCATCTGGCCCCAACGGGCAGGGTGCAGCCCCCTCCTTTCCCTaGGTGCTTCTTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FCQQPGMGKPSGPNGQGAAPSFP*VLLQQH
Trigger: ATGCTGCTGAAGAAGCACGCAGGGAAAGGAGGGGGC...TGCACCCTGCCCGTTGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494183.5
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGCGAGGGCCCCAACAGTaGCCGCTCAGGGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKRGPQQ*PLRVRG
Trigger: CCCTCGGACCCTGAGCGGCCACTGTTGGGGCCCTCG...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR TCA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACACCACGGCCACCACTaGCAGGAGGGCCGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GLLINMLASEVAQQAGLAHHGHH*QEGRQD
Trigger: GTCCTGGCGGCCCTCCTGTCAGTGGTGGCCGTGGTG...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTCGGGTCCTCGGATCTaGGCTCCCGGCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKSGPRI*APGPLL
Trigger: AAGGAGGGGGCCGGGAGCCCAGATCCGAGGACCCGA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATTCGGGTCCTCGGATCTaGGCTCCCGGCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHSGPRI*APGPLL
Trigger: AAGGAGGGGGCCGGGAGCCCAGATCCGAGGACCCGA...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp ATTCATCACTTTTGCCAACAGCCAGGCATGGGTAAGCCATCTGGCCCCAATTGGCCCTGTGTCCCCAGGTaGCCCTCTTGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IHHFCQQPGMGKPSGPNWPCVPR*PSWAWR
Trigger: CCTCCAGGCCCAAGAGGGCCACCTGGGGACACAGGG...CCAATTGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGCAAAAGTGATGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610288.4
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCACCACGGCCACCACTaGCAGGAGGGCCGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSHHGHH*QEGRQD
Trigger: GTCCTGGCGGCCCTCCTGTCAGTGGTGGCCGTGGTG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTCTTCAGCAGCATCGTaGCGGGGTCGGCCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKSSAAS*RGRPSR
Trigger: CCGAGACGGCCGACCCCGCCACGATGCTGCTGAAGA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACACCCTGTGTCCCCAGGTaGCCCTCTTGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FFSNPSFGGMDIPFPSGTPCVPR*PSWAWR
Trigger: CCTCCAGGCCCAAGAGGGCCACCTGGGGACACAGGG...TGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGTCCATGAGGTCCCATaGGGCCAGGTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKVHEVP*GQVGHG
Trigger: CCCATGGCCCACCTGGCCCCATGGGACCTCATGGAC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATGTCCATGAGGTCCCATaGGGCCAGGTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHVHEVP*GQVGHG
Trigger: CCCATGGCCCACCTGGCCCCATGGGACCTCATGGAC...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGGCCCTTGTAGTCCTTaGGGTCCAGGAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKGPCSP*GPGGPG
Trigger: CCCTGGACCTCCTGGACCTCAAGGACTACAAGGGCC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGGTCCAGGAAGTCCATaGGGTCCCATGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKGPGSP*GPMGPG
Trigger: ACCTGGCCCCATGGGACCTCATGGACTTCCTGGACC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGCCAGACCCGCAGGCGTaGACCATCCCCGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKPDPQA*TIPAFF
Trigger: GAAGAAAGCGGGGATGGTGCACGCCTGCGGGTCTGG...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAATGGTCCGGGCACAATaGTGTTCGGCAGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQMVRAQ*CSAGVG
Trigger: CCCGACCCCTGCCGAACAGCATTGTGCCCGGACCAT...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR GCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTACGGACCCCTGCCTTaGTCAGCGTCCAGACCCGCA +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKYGPLP*SASRPA
Trigger: TGCGGGTCTGGACGCTGAGCAAGGCAGGGGTCCGTA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCGGGTCCTCGGATCTaGGCTCCCGGCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSSGPRI*APGPLL
Trigger: AAGGAGGGGGCCGGGAGCCCAGATCCGAGGACCCGA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGCGGCACACGGGGGCATaGTCCGGGCACAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKRHTGA*SGHNAV
Trigger: AACAGCATTGTGCCCGGACCATGCCCCCGTGTGCCG...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCCCTGTGTCCCCAGGTaGCCCTCTTGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSPCVPR*PSWAWR
Trigger: CCTCCAGGCCCAAGAGGGCCACCTGGGGACACAGGG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCATGGGCCATGGGGACCTaGTGGGCCTGGTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: GLLINMLASEVAQQAGLAWAMGT*WAWWAY
Trigger: ATAGGCCCACCAGGCCCACCAGGTCCCCATGGCCCA...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTGCCAACAGCCAGGCATaGGTAAGCCATCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSANSQA*VSHLAP
Trigger: TGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGC...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCACCACGGCCACCACTaGCAGGAGGGCCGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIHHGHH*QEGRQD
Trigger: GTCCTGGCGGCCCTCCTGTCAGTGGTGGCCGTGGTG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACGCGGATACGGACCCCTaGCTTGCTCAGCGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDADTDP*LAQRPD
Trigger: GTCTGGACGCTGAGCAAGGCAGGGGTCCGTATCCGC...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR GCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTAGCCGAAGTCGCGGCTaGCCGAAGGATCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSSRSRG*PKDLRS
Trigger: GCTGCGGAGATCCTTCGGGCAGCCGCGACTTCGGCT...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR CCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTCGAGGGCCCCAACAGTaGCCGCTCAGGGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCRGPQQ*PLRVRG
Trigger: CCCTCGGACCCTGAGCGGCCACTGTTGGGGCCCTCG...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTCTTCAGCAGCATCGTaGCGGGGTCGGCCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPSSAAS*RGRPSR
Trigger: CCGAGACGGCCGACCCCGCCACGATGCTGCTGAAGA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACGGCACACGGGGGCATaGTCCGGGCACAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: GLLINMLASEVAQQAGLARHTGA*SGHNAV
Trigger: AACAGCATTGTGCCCGGACCATGCCCCCGTGTGCCG...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACATGGAAGGGGCCCCTTTaGCGGATTCGAGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FFSNPSFGGMDIPFPSGTWKGPL*RIRERR
Trigger: TCGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCA...TGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGCAGGCAGCAGATGAATaGAAGGGGCCCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKQAADE*KGPLWR
Trigger: CCGCCAAAGGGGCCCCTTCCATTCATCTGCTGCCTG...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGGCCCTGCCTGTCCTTaGTCACCCTTAATCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKGPACP*SPLIRR
Trigger: CCGCCTGATTAAGGGTGACCAAGGACAGGCAGGGCC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTTCACCGGGTACTCCTaGCATTCCACGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKFTGYS*HSTGAI
Trigger: GATGGCCCCCGTGGAATGCCAGGAGTACCCGGTGAA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTCCCTTTTTGACCAGGTaGACCCCTTGGTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSPFLTR*TPWSLS
Trigger: GCTCAGGGACCAAGGGGTCCACCTGGTCAAAAAGGG...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGGGACCTGGTGGGCCTaGTGGGCCTATGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKGTWWA*WAYDRR
Trigger: CCTTCTATCATAGGCCCACCAGGCCCACCAGGTCCC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGGGCCATGGGGACCTaGTGGGCCTGGTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSWAMGT*WAWWAY
Trigger: ATAGGCCCACCAGGCCCACCAGGTCCCCATGGCCCA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGGGCCATGGGGACCTaGTGGGCCTGGTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCWAMGT*WAWWAY
Trigger: ATAGGCCCACCAGGCCCACCAGGTCCCCATGGCCCA...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTGTCCATGAGGTCCCATaGGGCCAGGTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSVHEVP*GQVGHG
Trigger: CCCATGGCCCACCTGGCCCCATGGGACCTCATGGAC...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGCCCATAGGGCCCTCTTaGTCCAGGCTCTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKPIGPS*SRLSHS
Trigger: GCTATGGGAGAGCCTGGACCAAGAGGGCCCTATGGG...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAACCCATAGGGCCCTCTTaGTCCAGGCTCTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQPIGPS*SRLSHS
Trigger: GCTATGGGAGAGCCTGGACCAAGAGGGCCCTATGGG...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATGAGCCCACACCCATAGGGCCCTCTTaGTCCAGGCTCTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: SNRLNPFVFQPKWPHEPTPIGPS*SRLSHS
Trigger: GCTATGGGAGAGCCTGGACCAAGAGGGCCCTATGGG...TGTGGGCTCATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTGCCAACAGCCAGGCATGGGTAAGCCATCTGGCCCCAACGGGCAGGGTGCACAGCAACCCAAGTTTTaGTGGGATGGACATCCCTTT +
Preference number: 4 (lower is better)
Translates to: FCQQPGMGKPSGPNGQGAQQPKF*WDGHPF
Trigger: AAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTG...TGCACCCTGCCCGTTGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494183.5
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCCTCCCAGCTGGAAGTaGAAAGCACCCTCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSPPSWK*KAPSVR
Trigger: CCGGACGGAGGGTGCTTTTCACTTCCAGCTGGGAGG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACACCACGGCCACCACTaGCAGGAGGGCCGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGHHGHH*QEGRQD
Trigger: GTCCTGGCGGCCCTCCTGTCAGTGGTGGCCGTGGTG...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATTCCACGATCCCCCTTTaGCCCCTTTGGGCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHSTIPL*PLWASS
Trigger: ACTAGAGGCCCAAAGGGGTCAAAGGGGGATCGTGGA...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCGGCCCTTGTAGTCCTTaGGGTCCAGGAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSGPCSP*GPGGPG
Trigger: CCCTGGACCTCCTGGACCTCAAGGACTACAAGGGCC...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAACCCCATGTCTCCCTTTaGGCCTTTGAGTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQPHVSL*AFESLL
Trigger: GAGCAGGGACTCAAAGGCTCAAAGGGAGACATGGGG...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATCCCCATGTCTCCCTTTaGGCCTTTGAGTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHPHVSL*AFESLL
Trigger: GAGCAGGGACTCAAAGGCTCAAAGGGAGACATGGGG...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGGTCCAGGAAGTCCATaGGGTCCCATGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPGPGSP*GPMGPG
Trigger: ACCTGGCCCCATGGGACCTCATGGACTTCCTGGACC...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGCCCCCTCCTTTCCCTaGGTGCTTCTTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKAPSFP*VLLQQH
Trigger: ATGCTGCTGAAGAAGCACGCAGGGAAAGGAGGGGGC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTATGGTCCGGGCACAATaGTGTTCGGCAGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPMVRAQ*CSAGVG
Trigger: CCCGACCCCTGCCGAACAGCATTGTGCCCGGACCAT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCGCGGATACGGACCCCTaGCTTGCTCAGCGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSADTDP*LAQRPD
Trigger: GTCTGGACGCTGAGCAAGGCAGGGGTCCGTATCCGC...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR CCA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTATCTTCAGCAGCATCGTaGCGGGGTCGGCCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVSSAAS*RGRPSR
Trigger: CCGAGACGGCCGACCCCGCCACGATGCTGCTGAAGA...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGCGGCGATCCTCGCCTaGAGGTCGTTGGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKAAILA*RSLVFT
Trigger: TGTGAAAACCAACGACCTCCAGGCGAGGATCGCCGC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGGAAGGGGCCCCTTTaGCGGATTCGAGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSWKGPL*RIRERR
Trigger: TCGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCCCCTGTGTCCCCAGGTaGCCCTCTTGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASRKKQPYVNISQTCKICPCVPR*PSWAWR
Trigger: CCTCCAGGCCCAAGAGGGCCACCTGGGGACACAGGG...GCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACTTCACCGGGTACTCCTaGCATTCCACGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDFTGYS*HSTGAI
Trigger: GATGGCCCCCGTGGAATGCCAGGAGTACCCGGTGAA...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTTTCTCCTGGCTTTCCTaGTTCACCGGGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSFSWLS*FTGYSW
Trigger: CCAGGAGTACCCGGTGAACCAGGAAAGCCAGGAGAA...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCGCCTGTGTCACCCTTaGGGCCGTTCTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSRLCHP*GRSLQR
Trigger: ACGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTTTCACCCTTTTGCCCTaGACGACCAGATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSFTLLP*TTRFPR
Trigger: CCTGGGGAATCTGGTCGTCCAGGGCAAAAGGGTGAA...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGAAGCCCAGGAAGCCCTaGTTCACCCTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKKPRKP*FTLLPW
Trigger: CCAGGGCAAAAGGGTGAACCAGGGCTTCCTGGGCTT...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAAGCCCAGGAAGCCCTaGTTCACCCTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQKPRKP*FTLLPW
Trigger: CCAGGGCAAAAGGGTGAACCAGGGCTTCCTGGGCTT...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACACCAGGTGGACCCCTTaGTCCCTGAGCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDTRWTP*SLSSRV
Trigger: GACTCTGGAGCTCAGGGACCAAGGGGTCCACCTGGT...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGCCCTTTTTGACCAGGTaGACCCCTTGGTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKPFLTR*TPWSLS
Trigger: GCTCAGGGACCAAGGGGTCCACCTGGTCAAAAAGGG...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATCCCTTTTTGACCAGGTaGACCCCTTGGTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHPFLTR*TPWSLS
Trigger: GCTCAGGGACCAAGGGGTCCACCTGGTCAAAAAGGG...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAACCTGGTGGGCCTGGTaGGCCTATGATAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQTWWAW*AYDRRT
Trigger: GGTCCTTCTATCATAGGCCCACCAGGCCCACCAGGT...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTGGGCCATGGGGACCTaGTGGGCCTGGTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: IKGLLINMLASEVAQQAGWAMGT*WAWWAY
Trigger: ATAGGCCCACCAGGCCCACCAGGTCCCCATGGCCCA...ACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCGTCCATGAGGTCCCATaGGGCCAGGTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPVHEVP*GQVGHG
Trigger: CCCATGGCCCACCTGGCCCCATGGGACCTCATGGAC...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACCCATCTGGCCCCAATTaGCAAGGGGCATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDPSGPN*QGASSP
Trigger: TGGGCTGGATGCCCCTTGCCAATTGGGGCCAGATGG...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGGCCCTGCCTGTCCTTaGTCACCCTTGACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPGPACP*SPLTVR
Trigger: CCTCACCGTCAAGGGTGACCAAGGACAGGCAGGGCC...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTCCACGATCCCCCTTTaGTCCGGGGGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPSTIPL*SGGSRF
Trigger: GAACCTGGAGCCCCCGGACCAAAGGGGGATCGTGGA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTACCCTTCTCACCCCGTaGACCAGGGAAGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPTLLTP*TREARQ
Trigger: CTGCCTGGCTTCCCTGGTCCACGGGGTGAGAAGGGT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGAAGGCAAAAAGGCTGTaGGAGCACGCTACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKKAKRL*EHATAQ
Trigger: CTGCGCTGTAGCGTGCTCTCACAGCCTTTTTGCCTT...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGTATCAGGCAGCAGATaGATGGAAGGGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKVSGSR*MEGAPL
Trigger: CAAAGGGGCCCCTTCCATTCATCTGCTGCCTGATAC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCGGACCCCTTGGTCCCTaGGCTCCAGAGTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSGPLGP*APESPF
Trigger: AAAAGGGGACTCTGGAGCTCAGGGACCAAGGGGTCC...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACCCCCATGTCTCCCTTTaGGCCTTTGAGTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDPHVSL*AFESLL
Trigger: GAGCAGGGACTCAAAGGCTCAAAGGGAGACATGGGG...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGAATAATCCCCTGCCTTaGTCAGCGTCCAGACCCGCA +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKNNPLP*SASRPA
Trigger: TGCGGGTCTGGACGCTGAGCAAGGCAGGGGATTATT...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR GCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTCCGGGCTCACCCTTTTaGCCATTCATCCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSPGSPF*PFIPGI
Trigger: AATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGG...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGCCTGGTTCACCCTTTTaGCCTGGACGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKPGSPF*PGRPDS
Trigger: GGAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGG...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGAGCCTTTGAGTCCCTaGTCTCCATCCATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKEPLSP*SPSIPG
Trigger: CCCAGGAATGGATGGAGAGCAGGGACTCAAAGGCTC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAGAGCCTTTGAGTCCCTaGTCTCCATCCATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQEPLSP*SPSIPG
Trigger: CCCAGGAATGGATGGAGAGCAGGGACTCAAAGGCTC...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACTTCTCCTTTGGGACCTaGAGGGCCATGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDFSFGT*RAMGSH
Trigger: ATGGGACCCCATGGCCCTGCAGGTCCCAAAGGAGAA...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATTCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCC +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHSHERQ*WRLNRS
Trigger: GGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGA...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGGGACTGGGTGGCGGTaGGGTAAAAAGCAAGACGAA +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKGTGWR*GKKQDE
Trigger: TTCGTCTTGCTTTTTACCCCACCGCCACCCAGTCCC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCTCTTCAGCAGCATCGTaGCGGGGTCGGCCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: ASRKKQPYVNISQTCKICSSAAS*RGRPSR
Trigger: CCGAGACGGCCGACCCCGCCACGATGCTGCTGAAGA...GCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTCTTCAGCAGCATCGTaGCGGGGTCGGCCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDSSAAS*RGRPSR
Trigger: CCGAGACGGCCGACCCCGCCACGATGCTGCTGAAGA...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAATCGGGTCCTCGGATCTaGGCTCCCGGCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DVIKGLLINMLASEVAQQSGPRI*APGPLL
Trigger: AAGGAGGGGGCCGGGAGCCCAGATCCGAGGACCCGA...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGTGGAAGGGGCCCCTTTaGCGGATTCGAGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLWKGPL*RIRERR
Trigger: TCGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCA...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTGGCCCTGCCTGTCCTTaGTCACCCTTAATCAGGCGG +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSGPACP*SPLIRR
Trigger: CCGCCTGATTAAGGGTGACCAAGGACAGGCAGGGCC...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCCCTGTGTCCCCAGGTaGCCCTCTTGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISPCVPR*PSWAWR
Trigger: CCTCCAGGCCCAAGAGGGCCACCTGGGGACACAGGG...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTCACCGGGTACTCCTaGCATTCCACGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSFTGYS*HSTGAI
Trigger: GATGGCCCCCGTGGAATGCCAGGAGTACCCGGTGAA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp ATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTCGCCTGTGTCACCCTTaGGGCCGTTCTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: IKGLLINMLASEVAQQAGRLCHP*GRSLQR
Trigger: ACGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCG...ACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTTCACCCTTTTGCCCTaGACGACCAGATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKFTLLP*TTRFPR
Trigger: CCTGGGGAATCTGGTCGTCCAGGGCAAAAGGGTGAA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCAAAGCCCAGGAAGCCCTaGTTCACCCTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLLINMLASEVAQQAGLAKPRKP*FTLLPW
Trigger: CCAGGGCAAAAGGGTGAACCAGGGCTTCCTGGGCTT...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTACCAGGTGGACCCCTTaGTCCCTGAGCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPTRWTP*SLSSRV
Trigger: GACTCTGGAGCTCAGGGACCAAGGGGTCCACCTGGT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCACCAGGTGGACCCCTTaGTCCCTGAGCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSTRWTP*SLSSRV
Trigger: GACTCTGGAGCTCAGGGACCAAGGGGTCCACCTGGT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTACCAGGTGGACCCCTTaGTCCCTGAGCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSTRWTP*SLSSRV
Trigger: GACTCTGGAGCTCAGGGACCAAGGGGTCCACCTGGT...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCGGGACCTGGTGGGCCTaGTGGGCCTATGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSGTWWA*WAYDRR
Trigger: CCTTCTATCATAGGCCCACCAGGCCCACCAGGTCCC...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTGGGCCATGGGGACCTaGTGGGCCTGGTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIWAMGT*WAWWAY
Trigger: ATAGGCCCACCAGGCCCACCAGGTCCCCATGGCCCA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTGTCCATGAGGTCCCATaGGGCCAGGTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIVHEVP*GQVGHG
Trigger: CCCATGGCCCACCTGGCCCCATGGGACCTCATGGAC...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGGACCTGCAGGGCCATaGGGTCCCATAGGACCATCT +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPGPAGP*GPIGPS
Trigger: AGATGGTCCTATGGGACCCCATGGCCCTGCAGGTCC...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTGGACCTGCAGGGCCATaGGGTCCCATAGGACCATCT +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSGPAGP*GPIGPS
Trigger: AGATGGTCCTATGGGACCCCATGGCCCTGCAGGTCC...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCCCATAGGGCCCTCTTaGTCCAGGCTCTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSPIGPS*SRLSHS
Trigger: GCTATGGGAGAGCCTGGACCAAGAGGGCCCTATGGG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAATTCCATTGGCTCCCTaGGTCCCCCATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQIPLAP*VPHVSL
Trigger: AAGGGAGACATGGGGGACCCAGGGAGCCAATGGAAT...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCCCAGCTGGAAGTaGAAAGCACCCTCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIPPSWK*KAPSVR
Trigger: CCGGACGGAGGGTGCTTTTCACTTCCAGCTGGGAGG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGACCATAGTCTTGAGGTaGTCCAGGGTATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKTIVLR*SRVSGS
Trigger: GCTGCCTGATACCCTGGATCACCTCAAGACTATGGT...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCCACGATCCCCCTTTaGCCCCTTTGGGCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSSTIPL*PLWASS
Trigger: ACTAGAGGCCCAAAGGGGTCAAAGGGGGATCGTGGA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR TCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTTCCACGATCCCCCTTTaGCCCCTTTGGGCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSSTIPL*PLWASS
Trigger: ACTAGAGGCCCAAAGGGGTCAAAGGGGGATCGTGGA...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTAGGACCCCTTGGTCCCTaGGCTCCAGAGTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVGPLGP*APESPF
Trigger: AAAAGGGGACTCTGGAGCTCAGGGACCAAGGGGTCC...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGGGCCCTTGTAGTCCTTaGGGTCCAGGAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DMYTTASRKKQPYVNISQGPCSP*GPGGPG
Trigger: CCCTGGACCTCCTGGACCTCAAGGACTACAAGGGCC...CTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACGGCCCTTGTAGTCCTTaGGGTCCAGGAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDGPCSP*GPGGPG
Trigger: CCCTGGACCTCCTGGACCTCAAGGACTACAAGGGCC...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCGGCCCTTGTAGTCCTTaGGGTCCAGGAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPGPCSP*GPGGPG
Trigger: CCCTGGACCTCCTGGACCTCAAGGACTACAAGGGCC...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCCCCATGTCTCCCTTTaGGCCTTTGAGTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSPHVSL*AFESLL
Trigger: GAGCAGGGACTCAAAGGCTCAAAGGGAGACATGGGG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCGGTCCAGGAAGTCCATaGGGTCCCATGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ASRKKQPYVNISQTCKICGPGSP*GPMGPG
Trigger: ACCTGGCCCCATGGGACCTCATGGACTTCCTGGACC...GCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTTGACGGTGAGGATCTaGTTACTGTGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKLTVRI*LLCRAA
Trigger: TGCTGCCCTGCACAGTAATCAGATCCTCACCGTCAA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR GCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCAGACCCGCAGGCGTaGACCATCCCCGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIPDPQA*TIPAFF
Trigger: GAAGAAAGCGGGGATGGTGCACGCCTGCGGGTCTGG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTATGGTCCGGGCACAATaGTGTTCGGCAGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIMVRAQ*CSAGVG
Trigger: CCCGACCCCTGCCGAACAGCATTGTGCCCGGACCAT...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTATGGTCCGGGCACAATaGTGTTCGGCAGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCMVRAQ*CSAGVG
Trigger: CCCGACCCCTGCCGAACAGCATTGTGCCCGGACCAT...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR GCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGCCGGGCTCACCCTTTTaGCCATTCATCCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKPGSPF*PFIPGI
Trigger: AATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGG...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATCCGGGCTCACCCTTTTaGCCATTCATCCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHPGSPF*PFIPGI
Trigger: AATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGG...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATATTCCTGGAGATCCCTaGTCTCCCTTTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHIPGDP*SPFGPC
Trigger: ACAAGGGCCAAAGGGAGAGCAGGGATCTCCAGGAAT...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACAGAGCCTTTGAGTCCCTaGTCTCCATCCATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FFSNPSFGGMDIPFPSGTEPLSP*SPSIPG
Trigger: CCCAGGAATGGATGGAGAGCAGGGACTCAAAGGCTC...TGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTTCTCCTTTGGGACCTaGAGGGCCATGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPFSFGT*RAMGSH
Trigger: ATGGGACCCCATGGCCCTGCAGGTCCCAAAGGAGAA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCGGCACACGGGGGCATaGTCCGGGCACAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIRHTGA*SGHNAV
Trigger: AACAGCATTGTGCCCGGACCATGCCCCCGTGTGCCG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTCGCCTGGAGGTCGTTaGTTTTCACACCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKSPGGR*FSHPGT
Trigger: TGTACCTGGGTGTGAAAACCAACGACCTCCAGGCGA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTGGAAGGGGCCCCTTTaGCGGATTCGAGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIWKGPL*RIRERR
Trigger: TCGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTTACCTCGTTTCCCTaGAGGGCCTGCTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPLTSFP*RACWAV
Trigger: AACTGCCCAGCAGGCCCTCCAGGGAAACGAGGTAAG...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGTTCACCGGGTACTCCTaGCATTCCACGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLFTGYS*HSTGAI
Trigger: GATGGCCCCCGTGGAATGCCAGGAGTACCCGGTGAA...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCGCCTGTGTCACCCTTaGGGCCGTTCTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIRLCHP*GRSLQR
Trigger: ACGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTAAGCCCAGGAAGCCCTaGTTCACCCTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSKPRKP*FTLLPW
Trigger: CCAGGGCAAAAGGGTGAACCAGGGCTTCCTGGGCTT...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTACCTTGTTTCCCCTTTaGTCCGGGGGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSTLFPL*SGGSRF
Trigger: GAACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGT...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGATAGAAGGACCCTGTaGACCCGGCATTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKDRRTL*TRHSRI
Trigger: GATTCTGGAATGCCGGGTCCACAGGGTCCTTCTATC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCACCTGGTGGGCCTGGTaGGCCTATGATAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSTWWAW*AYDRRT
Trigger: GGTCCTTCTATCATAGGCCCACCAGGCCCACCAGGT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTACCTGGTGGGCCTGGTaGGCCTATGATAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPTWWAW*AYDRRT
Trigger: GGTCCTTCTATCATAGGCCCACCAGGCCCACCAGGT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAATGGGCCATGGGGACCTaGTGGGCCTGGTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEWAMGT*WAWWAY
Trigger: ATAGGCCCACCAGGCCCACCAGGTCCCCATGGCCCA...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACCCCAAGGAAAACTGGTaGCAGCAACAGGCTCAACCC +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDPKENW*QQQAQP
Trigger: GGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGG...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATCAGCCCAAGGAAAACTaGTGGCAGCAACAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHQPKEN*WQQQAQ
Trigger: TTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGCTG...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAACAGCCCAAGGAAAACTaGTGGCAGCAACAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQQPKEN*WQQQAQ
Trigger: TTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGCTG...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTAACTGTGGGGAAGCCTaGCAGGCCCCTAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFINCGEA*QAPRSL
Trigger: CAGGGACCTAGGGGCCTGCCAGGCTTCCCCACAGTT...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR TCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATACCATCCTAGGTCCCTaGTCACCTTGTTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHTILGP*SPCSPL
Trigger: TAAGGGAGAACAAGGTGATCAGGGACCTAGGATGGT...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGAATTCCTGCAGCAGATaGTCCAGGGTCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKNSCSR*SRVTLF
Trigger: GAAAAGGGTGACCCTGGATCATCTGCTGCAGGAATT...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGAAGCCTGGTTCTCCTTaGGGACCAATGAAACCTGGT +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKKPGSP*GPMKPG
Trigger: ACCAGGTTTCATTGGTCCTCAAGGAGAACCAGGCTT...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTGGACCCCTTGGTCCCTaGGCTCCAGAGTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIGPLGP*APESPF
Trigger: AAAAGGGGACTCTGGAGCTCAGGGACCAAGGGGTCC...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTAGGACCCCTTGGTCCCTaGGCTCCAGAGTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALGPLGP*APESPF
Trigger: AAAAGGGGACTCTGGAGCTCAGGGACCAAGGGGTCC...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCTCCCTTTGAGCCTTTaGGTCCCTGCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSLPLSL*VPALHP
Trigger: TGGATGGAGAGCAGGGACTCAAAGGCTCAAAGGGAG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTACCCCATGTCTCCCTTTaGGCCTTTGAGTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVPHVSL*AFESLL
Trigger: GAGCAGGGACTCAAAGGCTCAAAGGGAGACATGGGG...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTGGTCCAGGAAGTCCATaGGGTCCCATGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: YTTASRKKQPYVNISQTCGPGSP*GPMGPG
Trigger: ACCTGGCCCCATGGGACCTCATGGACTTCCTGGACC...ACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAGAGTCAACGCCGACATaGAAGGTGAATGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQESTPT*KVNGNV
Trigger: CACATTCCCATTCACCTTTCATGTCGGCGTTGACTC...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTAGAGGCGATTTTGGCTaGTCCCTTCTCAGAACATGT +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSRGDFG*SLLRTC
Trigger: ACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCT...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTGCCAACAGCCAGGCATGGGTAAGCCATCTGGCCCCAACGGGCAGGGTGCAAATTGTGTCAGACATTaGGCAATACGTTATCCTAAC +
Preference number: 4 (lower is better)
Translates to: FCQQPGMGKPSGPNGQGANCVRH*AIRYPN
Trigger: GTTAGGATAACGTATTGCTCAATGTCTGACACAATT...TGCACCCTGCCCGTTGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494183.5
CDS-3UTR GCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGGAGGACCGGACCTGTTaGGCCTCTGTGAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLEDRTC*ASVSLP
Trigger: AGGCAAACTCACAGAGGCGCAACAGGTCCGGTCCTC...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCCTCCTTTCCCTGCGTaGTTCTTCAGCAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPPPFPA*FFSSIV
Trigger: CACGATGCTGCTGAAGAAGCACGCAGGGAAAGGAGG...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACCGGGCTCACCCTTTTaGCCATTCATCCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: GLLINMLASEVAQQAGLAPGSPF*PFIPGI
Trigger: AATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGG...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTCCATTCTGTCCTACTaGTCCAGGCAACCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPSILSY*SRQPGL
Trigger: GAGCCCGGGTTGCCTGGAGCAGTAGGACAGAATGGA...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGTCCATTCTGTCCTACTaGTCCAGGCAACCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLSILSY*SRQPGL
Trigger: GAGCCCGGGTTGCCTGGAGCAGTAGGACAGAATGGA...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCCTGGTTCACCCTTTTaGCCTGGACGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSPGSPF*PGRPDS
Trigger: GGAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGAGCCTTTGAGTCCCTaGTCTCCATCCATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPEPLSP*SPSIPG
Trigger: CCCAGGAATGGATGGAGAGCAGGGACTCAAAGGCTC...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGTTCTCCTTTGGGACCTaGAGGGCCATGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: VISSATQVLVGWTSLFPQFSFGT*RAMGSH
Trigger: ATGGGACCCCATGGCCCTGCAGGTCCCAAAGGAGAA...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACTTCCCATGTCTTCACTaGCAAGGGCAGCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDFPCLH*QGQPKE
Trigger: TTCCTTGGGCTGCCCTTGGCAGTGAAGACATGGGAA...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACCTCCGCAGCCCCGCGTaGGCGATCCTTAAATACCCT +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDLRSPA*AILKYP
Trigger: AGGGTATTTAAGGATCGCGCACGCGGGGCTGCGGAG...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAAGGGGCGACTAAGGTaGAGAAGAGAGAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQKGRLR*RRERKT
Trigger: CGTTTTCCTCTCTCTTCTCCACCTTAGTCGCCCCTT...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGGGACTGGGTGGCGGTaGGGTAAAAAGCAAGACGAA +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPGTGWR*GKKQDE
Trigger: TTCGTCTTGCTTTTTACCCCACCGCCACCCAGTCCC...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTGGGACTGGGTGGCGGTaGGGTAAAAAGCAAGACGAA +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSGTGWR*GKKQDE
Trigger: TTCGTCTTGCTTTTTACCCCACCGCCACCCAGTCCC...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp AAGTATAGCCCTACTCTGGGTAAGACAATATATAGTGGGGAAAGAAAGGATAACTCGGGTCCTCGGATCTaGGCTCCCGGCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KYSPTLGKTIYSGERKDNSGPRI*APGPLL
Trigger: AAGGAGGGGGCCGGGAGCCCAGATCCGAGGACCCGA...GTTATCCTTTCTTTCCCCACTATATATTGTCTTACCCAGAGTAGGGCTATACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGTGGAAGGGGCCCCTTTaGCGGATTCGAGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: DVSGVKMDMYTTASRKKQWKGPL*RIRERR
Trigger: TCGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCA...CTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCAGGCAGCAGATGAATaGAAGGGGCCCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIQAADE*KGPLWR
Trigger: CCGCCAAAGGGGCCCCTTCCATTCATCTGCTGCCTG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCCTTACCTCGTTTCCCTaGAGGGCCTGCTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPLTSFP*RACWAV
Trigger: AACTGCCCAGCAGGCCCTCCAGGGAAACGAGGTAAG...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGCTTACCTCGTTTCCCTaGAGGGCCTGCTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VISSATQVLVGWTSLFPQLTSFP*RACWAV
Trigger: AACTGCCCAGCAGGCCCTCCAGGGAAACGAGGTAAG...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACGGCCCTGCCTGTCCTTaGTCACCCTTAATCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDGPACP*SPLIRR
Trigger: CCGCCTGATTAAGGGTGACCAAGGACAGGCAGGGCC...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTTCTCCTGGCTTTCCTaGTTCACCGGGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPFSWLS*FTGYSW
Trigger: CCAGGAGTACCCGGTGAACCAGGAAAGCCAGGAGAA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCAAGCCTTGTTCTCCTaGCTTTCCTGGTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPQALFS*LSWFTG
Trigger: CCCGGTGAACCAGGAAAGCCAGGAGAACAAGGCTTG...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCGCCTGTGTCACCCTTaGGGCCGTTCTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISRLCHP*GRSLQR
Trigger: ACGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCG...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTTCACCCTTTTGCCCTaGACGACCAGATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPFTLLP*TTRFPR
Trigger: CCTGGGGAATCTGGTCGTCCAGGGCAAAAGGGTGAA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGACCTTGTTTCCCCTTTaGTCCGGGGGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VISSATQVLVGWTSLFPQTLFPL*SGGSRF
Trigger: GAACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGT...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTCTCCTTTCATTCCATTaGCTCCCGGTAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSLLSFH*LPVIQE
Trigger: TTCCTGGATTACCGGGAGCCAATGGAATGAAAGGAG...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGACCATCTGTACCCTTTaGTCCAGGAAGTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKTICTL*SRKSMR
Trigger: CCTCATGGACTTCCTGGACCAAAGGGTACAGATGGT...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTGGACCTGCAGGGCCATaGGGTCCCATAGGACCATCT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIGPAGP*GPIGPS
Trigger: AGATGGTCCTATGGGACCCCATGGCCCTGCAGGTCC...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTGGACCTGCAGGGCCATaGGGTCCCATAGGACCATCT +
Preference number: 4 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCGPAGP*GPIGPS
Trigger: AGATGGTCCTATGGGACCCCATGGCCCTGCAGGTCC...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTGCCAACAGCCAGGCATaGGTAAGCCATCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCANSQA*VSHLAP
Trigger: TGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGC...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACACAGTCATGCTCATGAGAGGCAGTGCTaGAGGCTGAATCGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: NMLASEVAQQAGLAHSHAHERQC*RLNRSS
Trigger: AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATG...AGCATGACTGTGTGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTCAACCCAAGTTTTGGTaGGATGGACATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSQPKFW*DGHPFS
Trigger: GGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTG...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCCCTGGTTCACCCTTTaGTCCAGGAAGTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSPWFTL*SRKSMR
Trigger: CCTCATGGACTTCCTGGACCAAAGGGTGAACCAGGG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR TCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCACCTCCCAGCTGGAAGTaGAAAGCACCCTCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAPPSWK*KAPSVR
Trigger: CCGGACGGAGGGTGCTTTTCACTTCCAGCTGGGAGG...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTACCATAGTCTTGAGGTaGTCCAGGGTATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPTIVLR*SRVSGS
Trigger: GCTGCCTGATACCCTGGATCACCTCAAGACTATGGT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTACCATAGTCTTGAGGTaGTCCAGGGTATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSTIVLR*SRVSGS
Trigger: GCTGCCTGATACCCTGGATCACCTCAAGACTATGGT...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTGGGCAGTTACATTCTaGAGGTGCTTCTCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKWAVTF*RCFSCD
Trigger: ATCGCAAGAGAAGCACCTTCAGAATGTAACTGCCCA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACAATTCCTGCAGCAGATaGTCCAGGGTCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDNSCSR*SRVTLF
Trigger: GAAAAGGGTGACCCTGGATCATCTGCTGCAGGAATT...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACATGGGCCTCTAGTTCCTaGTTCACCTTGTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: FFSNPSFGGMDIPFPSGTWASSS*FTLFPL
Trigger: AAGGGGAAACAAGGTGAATCAGGAACTAGAGGCCCA...TGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACTGGGCCTCTAGTTCCTaGTTCACCTTGTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDWASSS*FTLFPL
Trigger: AAGGGGAAACAAGGTGAATCAGGAACTAGAGGCCCA...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTTCCACGATCCCCCTTTaGCCCCTTTGGGCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCSTIPL*PLWASS
Trigger: ACTAGAGGCCCAAAGGGGTCAAAGGGGGATCGTGGA...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTGCCGTTGTAGTCTATaGTCTCAGTGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKCRCSL*SQWLLD
Trigger: ATCAAGGAGCCACTGAGATCATAGACTACAACGGCA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAAGGTCCAGGAAGTCCATaGGGTCCCATGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKGPGSP*GPMGPG
Trigger: ACCTGGCCCCATGGGACCTCATGGACTTCCTGGACC...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATTCATCACTTTTGCCAACAGCCAGGCATGGGTAAGCCATCTGGCCCCAATTGGAATTCTCTAATGGGCTaGAAGGGTGCCTACTCCTCA +
Preference number: 4 (lower is better)
Translates to: IHHFCQQPGMGKPSGPNWNSLMG*KGAYSS
Trigger: TGAGGAGTAGGCACCCTTTCAGCCCATTAGAGAATT...CCAATTGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGCAAAAGTGATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610288.4
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTGGAATCACACAAGCTaGACAGCAAAGCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKWNHTS*TAKQTA
Trigger: TGCTGTCTGCTTTGCTGTTCAGCTTGTGTGATTCCA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCGGACCCCTAGGTCCCTaGTCACCTTGTTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPGPLGP*SPCSPL
Trigger: TAAGGGAGAACAAGGTGATCAGGGACCTAGGGGTCC...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494183.5
CDS-3UTR GCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTGAGGACCGGACCTGTTaGGCCTCTGTGAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIEDRTC*ASVSLP
Trigger: AGGCAAACTCACAGAGGCGCAACAGGTCCGGTCCTC...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR GCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCCTCAAATAATCCCCTaGCTTGCTCAGCGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPPQIIP*LAQRPD
Trigger: GTCTGGACGCTGAGCAAGGCAGGGGATTATTTGAGG...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR GCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCCCTCCTTTCCCTGCGTaGTTCTTCAGCAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPPPFPA*FFSSIV
Trigger: CACGATGCTGCTGAAGAAGCACGCAGGGAAAGGAGG...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR GCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGCCTCCTTTCCCTGCGTaGTTCTTCAGCAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: VISSATQVLVGWTSLFPQPPFPA*FFSSIV
Trigger: CACGATGCTGCTGAAGAAGCACGCAGGGAAAGGAGG...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR GCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCGCCCCCTCCTTTCCCTaGGTGCTTCTTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPAPSFP*VLLQQH
Trigger: ATGCTGCTGAAGAAGCACGCAGGGAAAGGAGGGGGC...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR GCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGCCCTGGAATTCCAGGTaGTCCAATAGAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKPWNSR*SNRTLL
Trigger: CAAAAGGGTTCTATTGGAGCACCTGGAATTCCAGGG...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCCGGGCTCACCCTTTTaGCCATTCATCCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPPGSPF*PFIPGI
Trigger: AATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGG...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTCCATTCTGTCCTACTaGTCCAGGCAACCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFISILSY*SRQPGL
Trigger: GAGCCCGGGTTGCCTGGAGCAGTAGGACAGAATGGA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTCCATTCTGTCCTACTaGTCCAGGCAACCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDSILSY*SRQPGL
Trigger: GAGCCCGGGTTGCCTGGAGCAGTAGGACAGAATGGA...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGCCTGGTTCACCCTTTTaGCCTGGACGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: VISSATQVLVGWTSLFPQPGSPF*PGRPDS
Trigger: GGAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGG...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTATTCCTGGAGATCCCTaGTCTCCCTTTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPIPGDP*SPFGPC
Trigger: ACAAGGGCCAAAGGGAGAGCAGGGATCTCCAGGAAT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCATTCCTGGAGATCCCTaGTCTCCCTTTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSIPGDP*SPFGPC
Trigger: ACAAGGGCCAAAGGGAGAGCAGGGATCTCCAGGAAT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTTCTCCTTTGGGACCTaGAGGGCCATGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIFSFGT*RAMGSH
Trigger: ATGGGACCCCATGGCCCTGCAGGTCCCAAAGGAGAA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTTTCTCCTTTGGGACCTaGAGGGCCATGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCFSFGT*RAMGSH
Trigger: ATGGGACCCCATGGCCCTGCAGGTCCCAAAGGAGAA...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp AACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACACAGTCATGCTTTCCCATGTCTTCACTaGCAAGGGCAGCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: NMLASEVAQQAGLAHSHAFPCLH*QGQPKE
Trigger: TTCCTTGGGCTGCCCTTGGCAGTGAAGACATGGGAA...AGCATGACTGTGTGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTTCTATGCCAGGCAGTaGCCTTATATCTGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKFYARQ*PYIWQY
Trigger: GTACTGCCAGATATAAGGGCACTGCCTGGCATAGAA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCGCCTGGAGGTCGTTaGTTTTCACACCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSSPGGR*FSHPGT
Trigger: TGTACCTGGGTGTGAAAACCAACGACCTCCAGGCGA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTGCGGCGATCCTCGCCTaGAGGTCGTTGGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIAAILA*RSLVFT
Trigger: TGTGAAAACCAACGACCTCCAGGCGAGGATCGCCGC...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCAGGCAGCAGATGAATaGAAGGGGCCCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHQAADE*KGPLWR
Trigger: CCGCCAAAGGGGCCCCTTCCATTCATCTGCTGCCTG...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCTTACCTCGTTTCCCTaGAGGGCCTGCTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFILTSFP*RACWAV
Trigger: AACTGCCCAGCAGGCCCTCCAGGGAAACGAGGTAAG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GAAATAGGAGGATCCATGATCCGAGTAAACACACATCATCTATTGGTACACTGTCGCCTGTGTCACCCTTaGGGCCGTTCTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EIGGSMIRVNTHHLLVHCRLCHP*GRSLQR
Trigger: ACGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCG...ACAGTGTACCAATAGATGATGTGTGTTTACTCGGATCATGGATCCTCCTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTAAGCCCAGGAAGCCCTaGTTCACCCTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIKPRKP*FTLLPW
Trigger: CCAGGGCAAAAGGGTGAACCAGGGCTTCCTGGGCTT...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCAAGCCCAGGAAGCCCTaGTTCACCCTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPKPRKP*FTLLPW
Trigger: CCAGGGCAAAAGGGTGAACCAGGGCTTCCTGGGCTT...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACAAGCCCAGGAAGCCCTaGTTCACCCTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDKPRKP*FTLLPW
Trigger: CCAGGGCAAAAGGGTGAACCAGGGCTTCCTGGGCTT...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACAGGACCAATGAAACCTaGTTCTCCCTTTATCCCCGG +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDRTNET*FSLYPR
Trigger: CCGGGGATAAAGGGAGAACCAGGTTTCATTGGTCCT...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTACCTTGTTTCCCCTTTaGTCCGGGGGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFITLFPL*SGGSRF
Trigger: GAACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGT...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR CCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACCCCTTTTTGACCAGGTaGACCCCTTGGTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDPFLTR*TPWSLS
Trigger: GCTCAGGGACCAAGGGGTCCACCTGGTCAAAAAGGG...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTTCACCTGTCATACCTaGGTCCCCCATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPFTCHT*VPHVSL
Trigger: AAGGGAGACATGGGGGACCCAGGTATGACAGGTGAA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGATAGAAGGACCCTGTaGACCCGGCATTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPDRRTL*TRHSRI
Trigger: GATTCTGGAATGCCGGGTCCACAGGGTCCTTCTATC...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGAGGGACCTGGTGGGCCTaGTGGGCCTATGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGGTWWA*WAYDRR
Trigger: CCTTCTATCATAGGCCCACCAGGCCCACCAGGTCCC...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAGGGACCTGGTGGGCCTaGTGGGCCTATGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEGTWWA*WAYDRR
Trigger: CCTTCTATCATAGGCCCACCAGGCCCACCAGGTCCC...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAACCCATAGGGCCCTCTTaGTCCAGGCTCTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEPIGPS*SRLSHS
Trigger: GCTATGGGAGAGCCTGGACCAAGAGGGCCCTATGGG...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACCCATAGGGCCCTCTTaGTCCAGGCTCTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGPIGPS*SRLSHS
Trigger: GCTATGGGAGAGCCTGGACCAAGAGGGCCCTATGGG...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAGCCAACAGCCAGGCATaGGTAAGCCATCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKANSQA*VSHLAP
Trigger: TGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGC...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCCAGCCCAAGGAAAACTaGTGGCAGCAACAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCQPKEN*WQQQAQ
Trigger: TTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGCTG...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATGAGCCCACACAACCCAAGTTTTGGTaGGATGGACATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SNRLNPFVFQPKWPHEPTQPKFW*DGHPFS
Trigger: GGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTG...TGTGGGCTCATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATGAGCCCACACAGCAACCCAAGTTTTaGTGGGATGGACATCCCTTT +
Preference number: 4 (lower is better)
Translates to: SNRLNPFVFQPKWPHEPTQQPKF*WDGHPF
Trigger: AAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTG...TGTGGGCTCATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTATGCACAACTAGTTGGTaGAGTCAAGCCCACGAGCGG +
Preference number: 4 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVCTTSW*SQAHER
Trigger: CCGCTCGTGGGCTTGACTCCACCAACTAGTTGTGCA...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTACCCTGGTTCACCCTTTaGTCCAGGAAGTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVPWFTL*SRKSMR
Trigger: CCTCATGGACTTCCTGGACCAAAGGGTGAACCAGGG...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTGCCAACAGCCAGGCATaGGTAAGCCATCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISANSQA*VSHLAP
Trigger: AGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGC...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512961.5
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTGTATCAGGCAGCAGATaGATGGAAGGGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIVSGSR*MEGAPL
Trigger: CAAAGGGGCCCCTTCCATTCATCTGCTGCCTGATAC...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTAGTATCAGGCAGCAGATaGATGGAAGGGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALVSGSR*MEGAPL
Trigger: CAAAGGGGCCCCTTCCATTCATCTGCTGCCTGATAC...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCACCATCCTAGGTCCCTaGTCACCTTGTTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSTILGP*SPCSPL
Trigger: TAAGGGAGAACAAGGTGATCAGGGACCTAGGATGGT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCAAGCCTGGTTCTCCTTaGGGACCAATGAAACCTGGT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSKPGSP*GPMKPG
Trigger: ACCAGGTTTCATTGGTCCTCAAGGAGAACCAGGCTT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGGGCCTCTAGTTCCTaGTTCACCTTGTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSWASSS*FTLFPL
Trigger: AAGGGGAAACAAGGTGAATCAGGAACTAGAGGCCCA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR TCA 90 bp TATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTTCCACGATCCCCCTTTaGCCCCTTTGGGCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: YTTASRKKQPYVNISQTCSTIPL*PLWASS
Trigger: ACTAGAGGCCCAAAGGGGTCAAAGGGGGATCGTGGA...ACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGGGACCCCTTGGTCCCTaGGCTCCAGAGTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWGPLGP*APESPF
Trigger: AAAAGGGGACTCTGGAGCTCAGGGACCAAGGGGTCC...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGGCCCTTGTAGTCCTTaGGGTCCAGGAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KGSDVIKGLLINMLASEVGPCSP*GPGGPG
Trigger: CCCTGGACCTCCTGGACCTCAAGGACTACAAGGGCC...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATTTCAGATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGGGCCCTTGTAGTCCTTaGGGTCCAGGAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ISDVSGVKMDMYTTASRKGPCSP*GPGGPG
Trigger: CCCTGGACCTCCTGGACCTCAAGGACTACAAGGGCC...CTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATCTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCTCCCTTTGAGCCTTTaGGTCCCTGCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFILPLSL*VPALHP
Trigger: TGGATGGAGAGCAGGGACTCAAAGGCTCAAAGGGAG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp AACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACACAGTCATGCTCAACATGCTAGCATCTaGAGTTGCACAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: NMLASEVAQQAGLAHSHAQHASI*SCTASR
Trigger: CCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTG...AGCATGACTGTGTGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGTCCTACTTGGTCACATaGGAGGCAGTGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: DMYTTASRKKQPYVNISQSYLVT*EAVLEA
Trigger: AGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGA...CTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATTTTCCCTTCTGGTGGTaGCACCTATGCATGAAACTA +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHFPFWW*HLCMKL
Trigger: TAGTTTCATGCATAGGTGTCACCACCAGAAGGGAAA...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCCTCTGTCACCCTTTTaGCCTGGTTCACCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSPLSPF*PGSPFN
Trigger: ATTGAAGGGTGAACCAGGTCAAAAGGGTGACAGAGG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR GCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCAACCCAAGGAACCAATaGTACTCGCGAAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSNPRNQ*YSRSRS
Trigger: ACTTCGGCTTCGCGAGTAGCATTGGTTCCTTGGGTT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR GCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAGAGGACCGGACCTGTTaGGCCTCTGTGAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKEDRTC*ASVSLP
Trigger: AGGCAAACTCACAGAGGCGCAACAGGTCCGGTCCTC...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTAAATAATCCCCTGCCTTaGTCAGCGTCCAGACCCGCA +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALNNPLP*SASRPA
Trigger: TGCGGGTCTGGACGCTGAGCAAGGCAGGGGATTATT...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399132.6
CDS-3UTR GCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAGCCCCCTCCTTTCCCTaGGTGCTTCTTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKAPSFP*VLLQQH
Trigger: ATGCTGCTGAAGAAGCACGCAGGGAAAGGAGGGGGC...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACCCCTGGAATTCCAGGTaGTCCAATAGAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDPWNSR*SNRTLL
Trigger: CAAAAGGGTTCTATTGGAGCACCTGGAATTCCAGGG...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCCCGGGCTCACCCTTTTaGCCATTCATCCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPPGSPF*PFIPGI
Trigger: AATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGG...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCCCTGGTTCACCCTTTTaGCCTGGACGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPPGSPF*PGRPDS
Trigger: GGAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGG...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCATTCCTGGAGATCCCTaGTCTCCCTTTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPIPGDP*SPFGPC
Trigger: ACAAGGGCCAAAGGGAGAGCAGGGATCTCCAGGAAT...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGTTCTCCTTTGGGACCTaGAGGGCCATGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: DVSGVKMDMYTTASRKKQFSFGT*RAMGSH
Trigger: ATGGGACCCCATGGCCCTGCAGGTCCCAAAGGAGAA...CTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACGACAAATTGTGTGTGTaGTCTCCGCCACCTTATCTC +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDDKLCV*SPPPYL
Trigger: GAGATAAGGTGGCGGAGAGCACACACACAATTTGTC...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGTCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCC +
Preference number: 4 (lower is better)
Translates to: WLIPSQNMLFLQQPKFWWSHERQ*WRLNRS
Trigger: GGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGA...CCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTTACGGACCCCTGCCTTaGTCAGCGTCCAGACCCGCA +
Preference number: 4 (lower is better)
Translates to: KGSDVIKGLLINMLASEVYGPLP*SASRPA
Trigger: TGCGGGTCTGGACGCTGAGCAAGGCAGGGGTCCGTA...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCAAGGGGCGACTAAGGTaGAGAAGAGAGAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSKGRLR*RRERKT
Trigger: CGTTTTCCTCTCTCTTCTCCACCTTAGTCGCCCCTT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR CCA 90 bp AACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACACAGTCATGCTAAGGGGCGACTAAGGTaGAGAAGAGAGAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: NMLASEVAQQAGLAHSHAKGRLR*RRERKT
Trigger: CGTTTTCCTCTCTCTTCTCCACCTTAGTCGCCCCTT...AGCATGACTGTGTGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTAGGGACTGGGTGGCGGTaGGGTAAAAAGCAAGACGAA +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALGTGWR*GKKQDE
Trigger: TTCGTCTTGCTTTTTACCCCACCGCCACCCAGTCCC...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTATCGCCTGGAGGTCGTTaGTTTTCACACCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVSPGGR*FSHPGT
Trigger: TGTACCTGGGTGTGAAAACCAACGACCTCCAGGCGA...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTGCGGCGATCCTCGCCTaGAGGTCGTTGGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISAAILA*RSLVFT
Trigger: TGTGAAAACCAACGACCTCCAGGCGAGGATCGCCGC...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAATTCACCGGGTACTCCTaGCATTCCACGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKFTGYS*HSTGAI
Trigger: GATGGCCCCCGTGGAATGCCAGGAGTACCCGGTGAA...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCATTCACCGGGTACTCCTaGCATTCCACGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAFTGYS*HSTGAI
Trigger: GATGGCCCCCGTGGAATGCCAGGAGTACCCGGTGAA...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCAAGCCTTGTTCTCCTaGCTTTCCTGGTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIQALFS*LSWFTG
Trigger: CCCGGTGAACCAGGAAAGCCAGGAGAACAAGGCTTG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGCAAGCCTTGTTCTCCTaGCTTTCCTGGTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: WLIPSQNMLFLQQPKFWWQALFS*LSWFTG
Trigger: CCCGGTGAACCAGGAAAGCCAGGAGAACAAGGCTTG...CCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACTTGCCCATTCATCCCTaGAATTCCAGGTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDLPIHP*NSRCSN
Trigger: ATTGGAGCACCTGGAATTCCAGGGATGAATGGGCAA...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCAGGACCAATGAAACCTaGTTCTCCCTTTATCCCCGG +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSRTNET*FSLYPR
Trigger: CCGGGGATAAAGGGAGAACCAGGTTTCATTGGTCCT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTAGGACCAATGAAACCTaGTTCTCCCTTTATCCCCGG +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPRTNET*FSLYPR
Trigger: CCGGGGATAAAGGGAGAACCAGGTTTCATTGGTCCT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAACCTTGTTTCCCCTTTaGTCCGGGGGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKETLFPL*SGGSRF
Trigger: GAACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGT...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGACCAGGTGGACCCCTTaGTCCCTGAGCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWTRWTP*SLSSRV
Trigger: GACTCTGGAGCTCAGGGACCAAGGGGTCCACCTGGT...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCCCTTTTTGACCAGGTaGACCCCTTGGTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISPFLTR*TPWSLS
Trigger: GCTCAGGGACCAAGGGGTCCACCTGGTCAAAAAGGG...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCCCTTTTTGACCAGGTaGACCCCTTGGTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SDVIKGLLINMLASEVAQPFLTR*TPWSLS
Trigger: GCTCAGGGACCAAGGGGTCCACCTGGTCAAAAAGGG...CTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTCACCTGTCATACCTaGGTCCCCCATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: IKGLLINMLASEVAQQAGFTCHT*VPHVSL
Trigger: AAGGGAGACATGGGGGACCCAGGTATGACAGGTGAA...ACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCGATAGAAGGACCCTGTaGACCCGGCATTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPDRRTL*TRHSRI
Trigger: GATTCTGGAATGCCGGGTCCACAGGGTCCTTCTATC...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAACCTGGTGGGCCTGGTaGGCCTATGATAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKETWWAW*AYDRRT
Trigger: GGTCCTTCTATCATAGGCCCACCAGGCCCACCAGGT...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATACCTGGTGGGCCTGGTaGGCCTATGATAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHTWWAW*AYDRRT
Trigger: GGTCCTTCTATCATAGGCCCACCAGGCCCACCAGGT...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATGTCCATGAGGTCCCATaGGGCCAGGTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHVHEVP*GQVGHG
Trigger: CCCATGGCCCACCTGGCCCCATGGGACCTCATGGAC...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGGGACCTGCAGGGCCATaGGGTCCCATAGGACCATCT +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWGPAGP*GPIGPS
Trigger: AGATGGTCCTATGGGACCCCATGGCCCTGCAGGTCC...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGCCCATAGGGCCCTCTTaGTCCAGGCTCTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWPIGPS*SRLSHS
Trigger: GCTATGGGAGAGCCTGGACCAAGAGGGCCCTATGGG...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACCATCTGGCCCCAATTaGCAAGGGGCATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKPSGPN*QGASSP
Trigger: TGGGCTGGATGCCCCTTGCCAATTGGGGCCAGATGG...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
CDS-3UTR CCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCACCATCTGGCCCCAATTaGCAAGGGGCATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAPSGPN*QGASSP
Trigger: TGGGCTGGATGCCCCTTGCCAATTGGGGCCAGATGG...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
CDS-3UTR CCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCAGCCAACAGCCAGGCATaGGTAAGCCATCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAANSQA*VSHLAP
Trigger: TGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGC...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATCACAGCAAGCAGGTTTaGCACACAGTCATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHHSKQV*HTVMLF
Trigger: AAAAAGCATGACTGTGTGCCAAACCTGCTTGCTGTG...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTACCCAAGGAAAACTGGTaGCAGCAACAGGCTCAACCC +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALPKENW*QQQAQP
Trigger: GGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGG...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACAAGTTTTGGTGGGATaGACATCCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLLINMLASEVAQQAGLAQVLVG*TSLFPQ
Trigger: CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTG...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTAGGAAATGTTTGACATaGTTGGATCGTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSRKCLT*LDRRRK
Trigger: CTTCCTCCTACGATCCAACCATGTCAAACATTTCCT...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTAGGTACATGCTGGGATaGAGAGGTCACCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPRYMLG*RGHLFS
Trigger: GGAGAAAAGGTGACCTCTCCATCCCAGCATGTACCT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTGCACAACTAGTTGGTaGAGTCAAGCCCACGAGCGG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFICTTSW*SQAHER
Trigger: CCGCTCGTGGGCTTGACTCCACCAACTAGTTGTGCA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR TCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAAAGGCAAAAAGGCTGTaGGAGCACGCTACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEKAKRL*EHATAQ
Trigger: CTGCGCTGTAGCGTGCTCTCACAGCCTTTTTGCCTT...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGAGTATCAGGCAGCAGATaGATGGAAGGGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGVSGSR*MEGAPL
Trigger: CAAAGGGGCCCCTTCCATTCATCTGCTGCCTGATAC...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp AGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATGAGCCCACAGCAGAGAGAAACCCATaGTTGATTTTAGGAAACACC +
Preference number: 4 (lower is better)
Translates to: SNRLNPFVFQPKWPHEPTAERNP*LILGNT
Trigger: GGTGTTTCCTAAAATCAATCATGGGTTTCTCTCTGC...TGTGGGCTCATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCGTTTAATGAGCTGCTaGTCAGCAGAGAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSRLMSC*SAERNP
Trigger: TGGGTTTCTCTCTGCTGATCAGCAGCTCATTAAACG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR TCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGAAGCCTGGTTCTCCTTaGGGACCAATGAAACCTGGT +
Preference number: 4 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLKPGSP*GPMKPG
Trigger: ACCAGGTTTCATTGGTCCTCAAGGAGAACCAGGCTT...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTGGGCCTCTAGTTCCTaGTTCACCTTGTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: IKGLLINMLASEVAQQAGWASSS*FTLFPL
Trigger: AAGGGGAAACAAGGTGAATCAGGAACTAGAGGCCCA...ACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTCCACGATCCCCCTTTaGCCCCTTTGGGCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWSTIPL*PLWASS
Trigger: ACTAGAGGCCCAAAGGGGTCAAAGGGGGATCGTGGA...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTGGACCCCTTGGTCCCTaGGCTCCAGAGTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFGPLGP*APESPF
Trigger: AAAAGGGGACTCTGGAGCTCAGGGACCAAGGGGTCC...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTGCCGTTGTAGTCTATaGTCTCAGTGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPCRCSL*SQWLLD
Trigger: ATCAAGGAGCCACTGAGATCATAGACTACAACGGCA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCTCCCTTTGAGCCTTTaGGTCCCTGCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISLPLSL*VPALHP
Trigger: TGGATGGAGAGCAGGGACTCAAAGGCTCAAAGGGAG...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAACTCCCTTTGAGCCTTTaGGTCCCTGCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKLPLSL*VPALHP
Trigger: TGGATGGAGAGCAGGGACTCAAAGGCTCAAAGGGAG...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACCCCATGTCTCCCTTTaGGCCTTTGAGTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKPHVSL*AFESLL
Trigger: GAGCAGGGACTCAAAGGCTCAAAGGGAGACATGGGG...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGACCAAAGTGGCCACATaGGCCCACAATACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: WLIPSQNMLFLQQPKFWWTKVAT*AHNTGS
Trigger: GCTTCCAGTATTGTGGGCTCATGTGGCCACTTTGGT...CCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTAGAGGCGATTTTGGCTaGTCCCTTCTCAGAACATGT +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSRGDFG*SLLRTC
Trigger: ACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCT...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAACCCAGAAGATGGCATTaGGTCAGGAGAGAAATTAAA +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQPRRWH*VRREIK
Trigger: TTTAATTTCTCTCCTGACTCAATGCCATCTTCTGGG...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATCCAGACCCGCAGGCGTaGACCATCCCCGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHPDPQA*TIPAFF
Trigger: GAAGAAAGCGGGGATGGTGCACGCCTGCGGGTCTGG...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp TATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGCCAACAGCCATGGTCCGGGCACAATaGTGTTCGGCAGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: YIHNFMLERLDSSLLPTAMVRAQ*CSAGVG
Trigger: CCCGACCCCTGCCGAACAGCATTGTGCCCGGACCAT...GGCTGTTGGCAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494183.5
CDS-3UTR GCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAACCTGGTTCACCCTTTTaGCCTGGACGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEPGSPF*PGRPDS
Trigger: GGAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGG...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAACCTGGTTCACCCTTTTaGCCTGGACGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKPGSPF*PGRPDS
Trigger: GGAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGG...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCATTCCTGGAGATCCCTaGTCTCCCTTTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPIPGDP*SPFGPC
Trigger: ACAAGGGCCAAAGGGAGAGCAGGGATCTCCAGGAAT...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTGAGCCTTTGAGTCCCTaGTCTCCATCCATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISEPLSP*SPSIPG
Trigger: CCCAGGAATGGATGGAGAGCAGGGACTCAAAGGCTC...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTTCTCCTTTGGGACCTaGAGGGCCATGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWFSFGT*RAMGSH
Trigger: ATGGGACCCCATGGCCCTGCAGGTCCCAAAGGAGAA...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp AACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACACAGTCATGCTGACAAATTGTGTGTGTaGTCTCCGCCACCTTATCTC +
Preference number: 4 (lower is better)
Translates to: NMLASEVAQQAGLAHSHADKLCV*SPPPYL
Trigger: GAGATAAGGTGGCGGAGAGCACACACACAATTTGTC...AGCATGACTGTGTGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCGACAAATTGTGTGTGTaGTCTCCGCCACCTTATCTC +
Preference number: 4 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCDKLCV*SPPPYL
Trigger: GAGATAAGGTGGCGGAGAGCACACACACAATTTGTC...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGTTCCCATGTCTTCACTaGCAAGGGCAGCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: DMYTTASRKKQPYVNISQFPCLH*QGQPKE
Trigger: TTCCTTGGGCTGCCCTTGGCAGTGAAGACATGGGAA...CTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATAATGGGCTGAAAGGGTaGCTACTCCTCATTGATAAT +
Preference number: 4 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHNGLKG*LLLIDN
Trigger: ATTATCAATGAGGAGTAGGCACCCTTTCAGCCCATT...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCATCAAACAAGGTACATaGTGGGATGGAGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSIKQGT*WDGEVT
Trigger: GGTGACCTCTCCATCCCAGCATGTACCTTGTTTGAT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTTCTATGCCAGGCAGTaGCCTTATATCTGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPFYARQ*PYIWQY
Trigger: GTACTGCCAGATATAAGGGCACTGCCTGGCATAGAA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGTCGCCTGGAGGTCGTTaGTTTTCACACCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: DMYTTASRKKQPYVNISQSPGGR*FSHPGT
Trigger: TGTACCTGGGTGTGAAAACCAACGACCTCCAGGCGA...CTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATGGCCCTGCCTGTCCTTaGTCACCCTTAATCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINGPACP*SPLIRR
Trigger: CCGCCTGATTAAGGGTGACCAAGGACAGGCAGGGCC...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATTTCTCCTGGCTTTCCTaGTTCACCGGGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHFSWLS*FTGYSW
Trigger: CCAGGAGTACCCGGTGAACCAGGAAAGCCAGGAGAA...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGTTCACCCTTTTGCCCTaGACGACCAGATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DVSGVKMDMYTTASRKKQFTLLP*TTRFPR
Trigger: CCTGGGGAATCTGGTCGTCCAGGGCAAAAGGGTGAA...CTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTTTCACCCTTTTGCCCTaGACGACCAGATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: YTTASRKKQPYVNISQTCFTLLP*TTRFPR
Trigger: CCTGGGGAATCTGGTCGTCCAGGGCAAAAGGGTGAA...ACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAACCAGGTGGACCCCTTaGTCCCTGAGCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRTRWTP*SLSSRV
Trigger: GACTCTGGAGCTCAGGGACCAAGGGGTCCACCTGGT...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTACCAGGTGGACCCCTTaGTCCCTGAGCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: KGSDVIKGLLINMLASEVTRWTP*SLSSRV
Trigger: GACTCTGGAGCTCAGGGACCAAGGGGTCCACCTGGT...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCTCCTTTCATTCCATTaGCTCCCGGTAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSLLSFH*LPVIQE
Trigger: TTCCTGGATTACCGGGAGCCAATGGAATGAAAGGAG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCCTTTCATTCCATTaGCTCCCGGTAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPLLSFH*LPVIQE
Trigger: TTCCTGGATTACCGGGAGCCAATGGAATGAAAGGAG...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGGATAGAAGGACCCTGTaGACCCGGCATTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: DMYTTASRKKQPYVNISQDRRTL*TRHSRI
Trigger: GATTCTGGAATGCCGGGTCCACAGGGTCCTTCTATC...CTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTGATAGAAGGACCCTGTaGACCCGGCATTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCDRRTL*TRHSRI
Trigger: GATTCTGGAATGCCGGGTCCACAGGGTCCTTCTATC...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAGGGACCTGGTGGGCCTaGTGGGCCTATGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRGTWWA*WAYDRR
Trigger: CCTTCTATCATAGGCCCACCAGGCCCACCAGGTCCC...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATGGGACCTGGTGGGCCTaGTGGGCCTATGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINGTWWA*WAYDRR
Trigger: CCTTCTATCATAGGCCCACCAGGCCCACCAGGTCCC...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACCCTTATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGTGGGCCATGGGGACCTaGTGGGCCTGGTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: MDPYIHNFMLERLDSSLLWAMGT*WAWWAY
Trigger: ATAGGCCCACCAGGCCCACCAGGTCCCCATGGCCCA...CAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATAAGGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR CCA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAAGTCCATGAGGTCCCATaGGGCCAGGTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQVHEVP*GQVGHG
Trigger: CCCATGGCCCACCTGGCCCCATGGGACCTCATGGAC...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCAATGGACCTGCAGGGCCATaGGGTCCCATAGGACCATCT +
Preference number: 4 (lower is better)
Translates to: SRKKQPYVNISQTCKICNGPAGP*GPIGPS
Trigger: AGATGGTCCTATGGGACCCCATGGCCCTGCAGGTCC...ATTGCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGGACCTGCAGGGCCATaGGGTCCCATAGGACCATCT +
Preference number: 4 (lower is better)
Translates to: KGSDVIKGLLINMLASEVGPAGP*GPIGPS
Trigger: AGATGGTCCTATGGGACCCCATGGCCCTGCAGGTCC...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAGTATTTCAACCAAAGTaGCCACATGAGCCCACAATA +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQVFQPK*PHEPTI
Trigger: TATTGTGGGCTCATGTGGCCACTTTGGTTGAAATAC...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCATGAGAGGCAGTGCTaGAGGCTGAATCGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISHERQC*RLNRSS
Trigger: AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATG...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCCGGGAGAGGCGATTTTaGCTGATCCCTTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPRERRF*LIPSQN
Trigger: GTTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCG...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGTTGCGCCTCTGTaGGTTTGCCTTATTTCTACC +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIPVAPL*VCLIST
Trigger: GGTAGAAATAAGGCAAACTCACAGAGGCGCAACAGG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR TCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTACCTGTTGCGCCTCTGTaGGTTTGCCTTATTTCTACC +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALPVAPL*VCLIST
Trigger: GGTAGAAATAAGGCAAACTCACAGAGGCGCAACAGG...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGCCTCCCAGCTGGAAGTaGAAAGCACCCTCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQPPSWK*KAPSVR
Trigger: CCGGACGGAGGGTGCTTTTCACTTCCAGCTGGGAGG...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTAACCATCCTAGGTCCCTaGTCACCTTGTTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALTILGP*SPCSPL
Trigger: TAAGGGAGAACAAGGTGATCAGGGACCTAGGATGGT...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGCGTTTAATGAGCTGCTaGTCAGCAGAGAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: VISSATQVLVGWTSLFPQRLMSC*SAERNP
Trigger: TGGGTTTCTCTCTGCTGATCAGCAGCTCATTAAACG...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAAGGTCCAGGAAGTCCATaGGGTCCCATGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQGPGSP*GPMGPG
Trigger: ACCTGGCCCCATGGGACCTCATGGACTTCCTGGACC...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGAACCAAAGTGGCCACATaGGCCCACAATACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGTKVAT*AHNTGS
Trigger: GCTTCCAGTATTGTGGGCTCATGTGGCCACTTTGGT...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTCCTACTTGGTCACATaGGAGGCAGTGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWSYLVT*EAVLEA
Trigger: AGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGA...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGAGAGGCGATTTTGGCTaGTCCCTTCTCAGAACATGT +
Preference number: 4 (lower is better)
Translates to: VISSATQVLVGWTSLFPQRGDFG*SLLRTC
Trigger: ACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCT...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAACCCAAGGAACCAATaGTACTCGCGAAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCNPRNQ*YSRSRS
Trigger: ACTTCGGCTTCGCGAGTAGCATTGGTTCCTTGGGTT...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCGACCTGTTTCCCACCTaGATTCAGTTCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSDLFPT*IQFKAK
Trigger: TTTTGCCTTGAACTGAATGCAGGTGGGAAACAGGTC...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR GCA 90 bp GTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGCCAGACCCGCAGGCGTaGACCATCCCCGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSIVHFHSFESIFGHHFMPDPQA*TIPAFF
Trigger: GAAGAAAGCGGGGATGGTGCACGCCTGCGGGTCTGG...CATGAAATGGTGACCAAATATGGACTCAAAGCTATGAAAATGTACTATACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp ATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTCCCTGGAATTCCAGGTaGTCCAATAGAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: IKGLLINMLASEVAQQAGPWNSR*SNRTLL
Trigger: CAAAAGGGTTCTATTGGAGCACCTGGAATTCCAGGG...ACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGCCCTGGAATTCCAGGTaGTCCAATAGAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLPWNSR*SNRTLL
Trigger: CAAAAGGGTTCTATTGGAGCACCTGGAATTCCAGGG...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTCCGGGCTCACCCTTTTaGCCATTCATCCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: YTTASRKKQPYVNISQTCPGSPF*PFIPGI
Trigger: AATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGG...ACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTTCCATTCTGTCCTACTaGTCCAGGCAACCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFSILSY*SRQPGL
Trigger: GAGCCCGGGTTGCCTGGAGCAGTAGGACAGAATGGA...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATTCCATTCTGTCCTACTaGTCCAGGCAACCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINSILSY*SRQPGL
Trigger: GAGCCCGGGTTGCCTGGAGCAGTAGGACAGAATGGA...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTAGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ASRKKQPYVNISQTCKICGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...GCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTTTCCCATGTCTTCACTaGCAAGGGCAGCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: YTTASRKKQPYVNISQTCFPCLH*QGQPKE
Trigger: TTCCTTGGGCTGCCCTTGGCAGTGAAGACATGGGAA...ACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTCTATTCCAAAAGAAGTaGTGTGCCTCTGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSLFQKK*CASVIF
Trigger: AAAAATGACAGAGGCACAGCACTTCTTTTGGAATAG...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTTCAGTCCCTGTGGCTaGACAACTAGTTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIFSPCG*TTSWWS
Trigger: ACTCCACCAACTAGTTGTGCAGCCACAGGGACTGAA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR CCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGCGGCACACGGGGGCATaGTCCGGGCACAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQRHTGA*SGHNAV
Trigger: AACAGCATTGTGCCCGGACCATGCCCCCGTGTGCCG...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTCGGCACACGGGGGCATaGTCCGGGCACAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVRHTGA*SGHNAV
Trigger: AACAGCATTGTGCCCGGACCATGCCCCCGTGTGCCG...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATCAGGCAGCAGATGAATaGAAGGGGCCCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHQAADE*KGPLWR
Trigger: CCGCCAAAGGGGCCCCTTCCATTCATCTGCTGCCTG...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATCTTACCTCGTTTCCCTaGAGGGCCTGCTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINLTSFP*RACWAV
Trigger: AACTGCCCAGCAGGCCCTCCAGGGAAACGAGGTAAG...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCATTCTCCTGGCTTTCCTaGTTCACCGGGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAFSWLS*FTGYSW
Trigger: CCAGGAGTACCCGGTGAACCAGGAAAGCCAGGAGAA...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTCTCCCTTAGGTCCTaGTATTCCATTCTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSFSLRS*YSILSY
Trigger: GTAGGACAGAATGGAATACCAGGACCTAAGGGAGAA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAACGCCTGTGTCACCCTTaGGGCCGTTCTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQRLCHP*GRSLQR
Trigger: ACGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCG...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCATTCACCCTTTTGCCCTaGACGACCAGATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAFTLLP*TTRFPR
Trigger: CCTGGGGAATCTGGTCGTCCAGGGCAAAAGGGTGAA...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAACCTTGTTTCCCCTTTaGTCCGGGGGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRTLFPL*SGGSRF
Trigger: GAACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGT...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGTTCACCTGTCATACCTaGGTCCCCCATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: DVSGVKMDMYTTASRKKQFTCHT*VPHVSL
Trigger: AAGGGAGACATGGGGGACCCAGGTATGACAGGTGAA...CTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGATAGAAGGACCCTGTaGACCCGGCATTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: DVIKGLLINMLASEVAQQDRRTL*TRHSRI
Trigger: GATTCTGGAATGCCGGGTCCACAGGGTCCTTCTATC...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTACCTGGTGGGCCTGGTaGGCCTATGATAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFTWWAW*AYDRRT
Trigger: GGTCCTTCTATCATAGGCCCACCAGGCCCACCAGGT...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACAGTTAGTTTCAATGGGTaGTGTAGGTATGAGTCAACG +
Preference number: 4 (lower is better)
Translates to: FFSNPSFGGMDIPFPSGTVSFNG*CRYEST
Trigger: CGTTGACTCATACCTACACCACCCATTGAAACTAAC...TGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGCCCAAGGAAAACTGGTaGCAGCAACAGGCTCAACCC +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWPKENW*QQQAQP
Trigger: GGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGG...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATGAGAGGCAGTGCTaGAGGCTGAATCGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKHERQC*RLNRSS
Trigger: AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATG...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGCAGCAACCCAAGTTTTaGTGGGATGGACATCCCTTT +
Preference number: 4 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLQQPKF*WDGHPF
Trigger: AAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTG...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCGGGAGAGGCGATTTTaGCTGATCCCTTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: DVSGVKMDMYTTASRKKQRERRF*LIPSQN
Trigger: GTTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCG...CTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCAACTGGCTTAGGGGTGTaGAATGTTACCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: GLLINMLASEVAQQAGLATGLGV*NVTRNV
Trigger: AACATTTCTGGTAACATTCCACACCCCTAAGCCAGT...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTAGGTACATGCTGGGATaGAGAGGTCACCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIRYMLG*RGHLFS
Trigger: GGAGAAAAGGTGACCTCTCCATCCCAGCATGTACCT...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTAAACAAGGTACATGCTaGGATGGAGAGGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPKQGTC*DGEVTF
Trigger: AAAGGTGACCTCTCCATCCCAGCATGTACCTTGTTT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp AGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCAATAAGGCAAAAAGGCTGTaGGAGCACGCTACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SRKKQPYVNISQTCKICNKAKRL*EHATAQ
Trigger: CTGCGCTGTAGCGTGCTCTCACAGCCTTTTTGCCTT...ATTGCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTGGGCAGTTACATTCTaGAGGTGCTTCTCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIWAVTF*RCFSCD
Trigger: ATCGCAAGAGAAGCACCTTCAGAATGTAACTGCCCA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTGGGCAGTTACATTCTaGAGGTGCTTCTCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPWAVTF*RCFSCD
Trigger: ATCGCAAGAGAAGCACCTTCAGAATGTAACTGCCCA...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATACCATCCTAGGTCCCTaGTCACCTTGTTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHTILGP*SPCSPL
Trigger: TAAGGGAGAACAAGGTGATCAGGGACCTAGGATGGT...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTGCAGAGAGAAACCCATaGTTGATTTTAGGAAACACC +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPAERNP*LILGNT
Trigger: GGTGTTTCCTAAAATCAATCATGGGTTTCTCTCTGC...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR TCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGAAATTCCTGCAGCAGATaGTCCAGGGTCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGNSCSR*SRVTLF
Trigger: GAAAAGGGTGACCCTGGATCATCTGCTGCAGGAATT...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATAATTCCTGCAGCAGATaGTCCAGGGTCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHNSCSR*SRVTLF
Trigger: GAAAAGGGTGACCCTGGATCATCTGCTGCAGGAATT...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAAAGCCTGGTTCTCCTTaGGGACCAATGAAACCTGGT +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKKPGSP*GPMKPG
Trigger: ACCAGGTTTCATTGGTCCTCAAGGAGAACCAGGCTT...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATGGACCCTTATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGGGACCCCTTGGTCCCTaGGCTCCAGAGTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: MDPYIHNFMLERLDSSLLGPLGP*APESPF
Trigger: AAAAGGGGACTCTGGAGCTCAGGGACCAAGGGGTCC...CAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATAAGGGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR TCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTCTCCCTTTGAGCCTTTaGGTCCCTGCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFLPLSL*VPALHP
Trigger: TGGATGGAGAGCAGGGACTCAAAGGCTCAAAGGGAG...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAACACAACTTCATGCTTaGAAGGTTAGATTCATCACT +
Preference number: 4 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQTQLHA*KVRFIT
Trigger: AGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGT...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAACATGCTAGCATCTaGAGTTGCACAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISQHASI*SCTASR
Trigger: CCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTG...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCAACATGCTAGCATCTaGAGTTGCACAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: DVSGVKMDMYTTASRKKQQHASI*SCTASR
Trigger: CCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTG...CTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTTCCTACTTGGTCACATaGGAGGCAGTGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFSYLVT*EAVLEA
Trigger: AGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGA...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACCATAACGGTTTAGGTTaGAAAAGTCTTCTTATGCCC +
Preference number: 4 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDHNGLG*KSLLMP
Trigger: GGGCATAAGAAGACTTTTTCAACCTAAACCGTTATG...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTGGAATCACACAAGCTaGACAGCAAAGCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIWNHTS*TAKQTA
Trigger: TGCTGTCTGCTTTGCTGTTCAGCTTGTGTGATTCCA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTTCTTCATTCCTCTCTaGAGACCTGATTCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKFFIPL*RPDSLN
Trigger: ATTTAAGGAATCAGGTCTTCAGAGAGGAATGAAGAA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAACCTCTGTCACCCTTTTaGCCTGGTTCACCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEPLSPF*PGSPFN
Trigger: ATTGAAGGGTGAACCAGGTCAAAAGGGTGACAGAGG...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGCCTCAAATAATCCCCTaGCTTGCTCAGCGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWPQIIP*LAQRPD
Trigger: GTCTGGACGCTGAGCAAGGCAGGGGATTATTTGAGG...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399132.6
CDS-3UTR GCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATCCTCCTTTCCCTGCGTaGTTCTTCAGCAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINPPFPA*FFSSIV
Trigger: CACGATGCTGCTGAAGAAGCACGCAGGGAAAGGAGG...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCTGGAATTCCAGGTaGTCCAATAGAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIPWNSR*SNRTLL
Trigger: CAAAAGGGTTCTATTGGAGCACCTGGAATTCCAGGG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGATTCCTGGAGATCCCTaGTCTCCCTTTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWIPGDP*SPFGPC
Trigger: ACAAGGGCCAAAGGGAGAGCAGGGATCTCCAGGAAT...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAGAGCCTTTGAGTCCCTaGTCTCCATCCATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLRISHFKTRYQLFTVQREPLSP*SPSIPG
Trigger: CCCAGGAATGGATGGAGAGCAGGGACTCAAAGGCTC...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGATCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCC +
Preference number: 4 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRSHERQ*WRLNRS
Trigger: GGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGA...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCAATGGGCTGAAAGGGTaGCTACTCCTCATTGATAAT +
Preference number: 4 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCNGLKG*LLLIDN
Trigger: ATTATCAATGAGGAGTAGGCACCCTTTCAGCCCATT...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTATCAAACAAGGTACATaGTGGGATGGAGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIIKQGT*WDGEVT
Trigger: GGTGACCTCTCCATCCCAGCATGTACCTTGTTTGAT...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGCAGGCAGCAGATGAATaGAAGGGGCCCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQQAADE*KGPLWR
Trigger: CCGCCAAAGGGGCCCCTTCCATTCATCTGCTGCCTG...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAAGGCCCTGCCTGTCCTTaGTCACCCTTAATCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQGPACP*SPLIRR
Trigger: CCGCCTGATTAAGGGTGACCAAGGACAGGCAGGGCC...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTTGCCCATTCATCCCTaGAATTCCAGGTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFILPIHP*NSRCSN
Trigger: ATTGGAGCACCTGGAATTCCAGGGATGAATGGGCAA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGTTCTCCCTTAGGTCCTaGTATTCCATTCTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: VISSATQVLVGWTSLFPQFSLRS*YSILSY
Trigger: GTAGGACAGAATGGAATACCAGGACCTAAGGGAGAA...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTCTCCCTTAGGTCCTaGTATTCCATTCTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: IKGLLINMLASEVAQQAGFSLRS*YSILSY
Trigger: GTAGGACAGAATGGAATACCAGGACCTAAGGGAGAA...ACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGGATAGAAGGACCCTGTaGACCCGGCATTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWDRRTL*TRHSRI
Trigger: GATTCTGGAATGCCGGGTCCACAGGGTCCTTCTATC...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCAGGGACCTGGTGGGCCTaGTGGGCCTATGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPGTWWA*WAYDRR
Trigger: CCTTCTATCATAGGCCCACCAGGCCCACCAGGTCCC...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAACCATCTGTACCCTTTaGTCCAGGAAGTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: DVIKGLLINMLASEVAQQTICTL*SRKSMR
Trigger: CCTCATGGACTTCCTGGACCAAAGGGTACAGATGGT...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000622134.4
CDS-3UTR CCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGACCCAAGGAAAACTGGTaGCAGCAACAGGCTCAACCC +
Preference number: 4 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRPKENW*QQQAQP
Trigger: GGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGG...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATCATGAGAGGCAGTGCTaGAGGCTGAATCGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINHERQC*RLNRSS
Trigger: AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATG...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATTTCAGATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGCATGAGAGGCAGTGCTaGAGGCTGAATCGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISDVSGVKMDMYTTASRKHERQC*RLNRSS
Trigger: AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATG...CTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATCTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCCAAGTTTTGGTGGGATaGACATCCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASRKKQPYVNISQTCKICQVLVG*TSLFPQ
Trigger: CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTG...GCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTACAACCCAAGTTTTGGTaGGATGGACATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALQPKFW*DGHPFS
Trigger: GGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTG...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCACGGGAGAGGCGATTTTaGCTGATCCCTTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLARERRF*LIPSQN
Trigger: GTTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCG...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTAGGAAATGTTTGACATaGTTGGATCGTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DRRRKESSHNNFGTDCPSRKCLT*LDRRRK
Trigger: CTTCCTCCTACGATCCAACCATGTCAAACATTTCCT...ACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCAGGAAATGTTTGACATaGTTGGATCGTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCRKCLT*LDRRRK
Trigger: CTTCCTCCTACGATCCAACCATGTCAAACATTTCCT...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTTTTGGAGCACAGGATaGAGAAAGATTAAGTGTCAA +
Preference number: 4 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKFWSTG*RKIKCQ
Trigger: TTGACACTTAATCTTTCTCCATCCTGTGCTCCAAAA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTCTCCTTTCATTCCATTaGCTCCCTGGGTCCCCCATG +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFLLSFH*LPGSPM
Trigger: CATGGGGGACCCAGGGAGCCAATGGAATGAAAGGAG...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR CCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCCAGATGCTCCCTTTaGTCCAGGAAGTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: KGSDVIKGLLINMLASEVARCSL*SRKSMR
Trigger: CCTCATGGACTTCCTGGACCAAAGGGAGCATCTGGC...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
3UTR CAA 72 bp TGGATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTaGGCACAGATTGTCCCAGTAAGCTCTCCTATATCA +
Preference number: 4 (lower is better)
Translates to: WIVGGRKALTTT*AQIVPVSSPIS
Trigger: TGATATAGGAGAGCTTACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTACCATAGTCTTGAGGTaGTCCAGGGTATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KGSDVIKGLLINMLASEVTIVLR*SRVSGS
Trigger: GCTGCCTGATACCCTGGATCACCTCAAGACTATGGT...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp TATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTCGTTTAATGAGCTGCTaGTCAGCAGAGAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: YTTASRKKQPYVNISQTCRLMSC*SAERNP
Trigger: TGGGTTTCTCTCTGCTGATCAGCAGCTCATTAAACG...ACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAAAATTCCTGCAGCAGATaGTCCAGGGTCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKNSCSR*SRVTLF
Trigger: GAAAAGGGTGACCCTGGATCATCTGCTGCAGGAATT...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATTGCCGTTGTAGTCTATaGTCTCAGTGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHCRCSL*SQWLLD
Trigger: ATCAAGGAGCCACTGAGATCATAGACTACAACGGCA...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTACTCCCTTTGAGCCTTTaGGTCCCTGCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLLPLSL*VPALHP
Trigger: TGGATGGAGAGCAGGGACTCAAAGGCTCAAAGGGAG...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTACCAAAGTGGCCACATaGGCCCACAATACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KGSDVIKGLLINMLASEVTKVAT*AHNTGS
Trigger: GCTTCCAGTATTGTGGGCTCATGTGGCCACTTTGGT...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTTCCCTTCTGGTGGTaGCACCTATGCATGAAACTA +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDFPFWW*HLCMKL
Trigger: TAGTTTCATGCATAGGTGTCACCACCAGAAGGGAAA...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACAATCTTATGCATCTTTTaGTACAGTAATGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FFSNPSFGGMDIPFPSGTILCIF*YSNVSW
Trigger: CCAGCTGACATTACTGTATCAAAAGATGCATAAGAT...TGTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTGGTGTCAGGTGGTTaGAAAACTGTAGCTAGAATA +
Preference number: 4 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSLVSGG*KTVARI
Trigger: TATTCTAGCTACAGTTTTTCAACCACCTGACACCAA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp TATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTCCCTGGAATTCCAGGTaGTCCAATAGAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: YTTASRKKQPYVNISQTCPWNSR*SNRTLL
Trigger: CAAAAGGGTTCTATTGGAGCACCTGGAATTCCAGGG...ACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAGACAAATTGTGTGTGTaGTCTCCGCCACCTTATCTC +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKDKLCV*SPPPYL
Trigger: GAGATAAGGTGGCGGAGAGCACACACACAATTTGTC...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATTCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCC +
Preference number: 4 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHSHERQ*WRLNRS
Trigger: GGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGA...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACTATTCCAAAAGAAGTaGTGTGCCTCTGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: GLLINMLASEVAQQAGLALFQKK*CASVIF
Trigger: AAAAATGACAGAGGCACAGCACTTCTTTTGGAATAG...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTGCGGCGATCCTCGCCTaGAGGTCGTTGGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVAAILA*RSLVFT
Trigger: TGTGAAAACCAACGACCTCCAGGCGAGGATCGCCGC...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGGCGGCGATCCTCGCCTaGAGGTCGTTGGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQAAILA*RSLVFT
Trigger: TGTGAAAACCAACGACCTCCAGGCGAGGATCGCCGC...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGATTGCCCATTCATCCCTaGAATTCCAGGTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGLPIHP*NSRCSN
Trigger: ATTGGAGCACCTGGAATTCCAGGGATGAATGGGCAA...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATTTGCCCATTCATCCCTaGAATTCCAGGTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHLPIHP*NSRCSN
Trigger: ATTGGAGCACCTGGAATTCCAGGGATGAATGGGCAA...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTTCTCCCTTAGGTCCTaGTATTCCATTCTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIFSLRS*YSILSY
Trigger: GTAGGACAGAATGGAATACCAGGACCTAAGGGAGAA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCAACCTTGTTTCCCCTTTaGTCCGGGGGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPTLFPL*SGGSRF
Trigger: GAACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGT...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCTTTGGCAATAAGCCATaGTGTAACCCCCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: ASRKKQPYVNISQTCKICFGNKP*CNPLEM
Trigger: CATCTCAAGGGGGTTACACCATGGCTTATTGCCAAA...GCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTTGGCAATAAGCCATaGTGTAACCCCCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDFGNKP*CNPLEM
Trigger: CATCTCAAGGGGGTTACACCATGGCTTATTGCCAAA...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGCCAACAGCCCCCAAGGAAAACTGGTaGCAGCAACAGGCTCAACCC +
Preference number: 4 (lower is better)
Translates to: YIHNFMLERLDSSLLPTAPKENW*QQQAQP
Trigger: GGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGG...GGCTGTTGGCAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR CCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTCAGCCCAAGGAAAACTaGTGGCAGCAACAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: KGSDVIKGLLINMLASEVQPKEN*WQQQAQ
Trigger: TTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGCTG...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCAACCCAAGTTTTGGTaGGATGGACATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DVSGVKMDMYTTASRKKQQPKFW*DGHPFS
Trigger: GGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTG...CTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATCGGGAGAGGCGATTTTaGCTGATCCCTTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINRERRF*LIPSQN
Trigger: GTTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCG...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTAAACAAGGTACATGCTaGGATGGAGAGGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIKQGTC*DGEVTF
Trigger: AAAGGTGACCTCTCCATCCCAGCATGTACCTTGTTT...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCAGTGCCCTTATATCTaGCAGTACAGCCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIQCPYI*QYSLLH
Trigger: ATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATATTCCATTGGCTCCCTaGGTCCCCCATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHIPLAP*VPHVSL
Trigger: AAGGGAGACATGGGGGACCCAGGGAGCCAATGGAAT...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR CCA 90 bp TGGTCACCATTTCATGTAAACTATTTCATGGCACTTTTTGTCCATGCAATTAGCCTCCTTTCATTCCATTaGCTCCCTGGGTCCCCCATG +
Preference number: 4 (lower is better)
Translates to: WSPFHVNYFMALFVHAISLLSFH*LPGSPM
Trigger: CATGGGGGACCCAGGGAGCCAATGGAATGAAAGGAG...GCTAATTGCATGGACAAAAAGTGCCATGAAATAGTTTACATGAAATGGTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR CCA 90 bp TGGTCACCATTTCATGTAAACTATTTCATGGCACTTTTTGTCCATGCAATTAGCGCCAGATGCTCCCTTTaGTCCAGGAAGTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: WSPFHVNYFMALFVHAISARCSL*SRKSMR
Trigger: CCTCATGGACTTCCTGGACCAAAGGGAGCATCTGGC...GCTAATTGCATGGACAAAAAGTGCCATGAAATAGTTTACATGAAATGGTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
3UTR CAA 72 bp CCAGTAAGCTCTCCTATATCATCGGGAGAGGCGATTTaGGCTGATCCCTTCTCAGAACATGTTATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PVSSPISSGEAI*ADPFSEHVISS
Trigger: TGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGATGATATAGGAGAGCTTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGGTATCAGGCAGCAGATaGATGGAAGGGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQVSGSR*MEGAPL
Trigger: CAAAGGGGCCCCTTCCATTCATCTGCTGCCTGATAC...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGCAGTTACATTCTaGAGGTGCTTCTCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWWAVTF*RCFSCD
Trigger: ATCGCAAGAGAAGCACCTTCAGAATGTAACTGCCCA...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp AGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCAATACCATCCTAGGTCCCTaGTCACCTTGTTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: SRKKQPYVNISQTCKICNTILGP*SPCSPL
Trigger: TAAGGGAGAACAAGGTGATCAGGGACCTAGGATGGT...ATTGCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACGCAGAGAGAAACCCATaGTTGATTTTAGGAAACACC +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDAERNP*LILGNT
Trigger: GGTGTTTCCTAAAATCAATCATGGGTTTCTCTCTGC...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATAAGCCTGGTTCTCCTTaGGGACCAATGAAACCTGGT +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINKPGSP*GPMKPG
Trigger: ACCAGGTTTCATTGGTCCTCAAGGAGAACCAGGCTT...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AAAGGTTCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTAAGCCTGGTTCTCCTTaGGGACCAATGAAACCTGGT +
Preference number: 4 (lower is better)
Translates to: KGSDVIKGLLINMLASEVKPGSP*GPMKPG
Trigger: ACCAGGTTTCATTGGTCCTCAAGGAGAACCAGGCTT...AACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGAACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGCTCCCTTTGAGCCTTTaGGTCCCTGCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQLPLSL*VPALHP
Trigger: TGGATGGAGAGCAGGGACTCAAAGGCTCAAAGGGAG...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCAATGAGTCAACGCCGACATaGAAGGTGAATGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: SRKKQPYVNISQTCKICNESTPT*KVNGNV
Trigger: CACATTCCCATTCACCTTTCATGTCGGCGTTGACTC...ATTGCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCAATCAACATGCTAGCATCTaGAGTTGCACAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRKKQPYVNISQTCKICNQHASI*SCTASR
Trigger: CCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTG...ATTGCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGTCCTACTTGGTCACATaGGAGGCAGTGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQSYLVT*EAVLEA
Trigger: AGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGA...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAAAATTCTCTAATGGGCTaGAAGGGTGCCTACTCCTCA +
Preference number: 4 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKNSLMG*KGAYSS
Trigger: TGAGGAGTAGGCACCCTTTCAGCCCATTAGAGAATT...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCCCCAGAAGATGGCATTaGGTCAGGAGAGAAATTAAA +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPPRRWH*VRREIK
Trigger: TTTAATTTCTCTCCTGACTCAATGCCATCTTCTGGG...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAATTTCCCTTCTGGTGGTaGCACCTATGCATGAAACTA +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKFPFWW*HLCMKL
Trigger: TAGTTTCATGCATAGGTGTCACCACCAGAAGGGAAA...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTACTATAAGCCAAGGATaGGTTAATTTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: IKGLLINMLASEVAQQAGTISQG*VNFPSG
Trigger: ACCAGAAGGGAAATTAACTCATCCTTGGCTTATAGT...ACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTACATAACGGTTTAGGTTaGAAAAGTCTTCTTATGCCC +
Preference number: 4 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVHNGLG*KSLLMP
Trigger: GGGCATAAGAAGACTTTTTCAACCTAAACCGTTATG...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATGACCTGTTTCCCACCTaGATTCAGTTCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHDLFPT*IQFKAK
Trigger: TTTTGCCTTGAACTGAATGCAGGTGGGAAACAGGTC...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCACCTGGTTCACCCTTTTaGCCTGGACGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPPGSPF*PGRPDS
Trigger: GGAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGG...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TGGTCACCATTTCATGTAAACTATTTCATGGCACTTTTTGTCCATGCAATTAGCATTCCTGGAGATCCCTaGTCTCCCTTTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: WSPFHVNYFMALFVHAISIPGDP*SPFGPC
Trigger: ACAAGGGCCAAAGGGAGAGCAGGGATCTCCAGGAAT...GCTAATTGCATGGACAAAAAGTGCCATGAAATAGTTTACATGAAATGGTGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGGAGCCTTTGAGTCCCTaGTCTCCATCCATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQEPLSP*SPSIPG
Trigger: CCCAGGAATGGATGGAGAGCAGGGACTCAAAGGCTC...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ATTTCAGATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ISDVSGVKMDMYTTASRKGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...CTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATCTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTTCACATGAGAGGCAGTaGTGGAGGCTGAATCGGTCC +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVSHERQ*WRLNRS
Trigger: GGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGA...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp AACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACACAGTCATGCTGAAAAAGTCTTCTTATaGCCAAAAGGACGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NMLASEVAQQAGLAHSHAEKVFL*PKGRFF
Trigger: AAAGAACCGTCCTTTTGGGCATAAGAAGACTTTTTC...AGCATGACTGTGTGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp ATTTCAGATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGTTCAGTCCCTGTGGCTaGACAACTAGTTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ISDVSGVKMDMYTTASRKFSPCG*TTSWWS
Trigger: ACTCCACCAACTAGTTGTGCAGCCACAGGGACTGAA...CTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATCTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR CCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGTTCTCCTGGCTTTCCTaGTTCACCGGGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQFSWLS*FTGYSW
Trigger: CCAGGAGTACCCGGTGAACCAGGAAAGCCAGGAGAA...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCACAAGCCTTGTTCTCCTaGCTTTCCTGGTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPQALFS*LSWFTG
Trigger: CCCGGTGAACCAGGAAAGCCAGGAGAACAAGGCTTG...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGCAAGCCTTGTTCTCCTaGCTTTCCTGGTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQQALFS*LSWFTG
Trigger: CCCGGTGAACCAGGAAAGCCAGGAGAACAAGGCTTG...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAACAAGCCTTGTTCTCCTaGCTTTCCTGGTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQQALFS*LSWFTG
Trigger: CCCGGTGAACCAGGAAAGCCAGGAGAACAAGGCTTG...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAATTCTCCCTTAGGTCCTaGTATTCCATTCTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: DVIKGLLINMLASEVAQQFSLRS*YSILSY
Trigger: GTAGGACAGAATGGAATACCAGGACCTAAGGGAGAA...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATAGGACCAATGAAACCTaGTTCTCCCTTTATCCCCGG +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINRTNET*FSLYPR
Trigger: CCGGGGATAAAGGGAGAACCAGGTTTCATTGGTCCT...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACTCCTTTCATTCCATTaGCTCCCGGTAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKLLSFH*LPVIQE
Trigger: TTCCTGGATTACCGGGAGCCAATGGAATGAAAGGAG...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTACCATCTGTACCCTTTaGTCCAGGAAGTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFTICTL*SRKSMR
Trigger: CCTCATGGACTTCCTGGACCAAAGGGTACAGATGGT...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000622134.4
CDS-3UTR CCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAACACAGCAAGCAGGTTTaGCACACAGTCATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKHSKQV*HTVMLF
Trigger: AAAAAGCATGACTGTGTGCCAAACCTGCTTGCTGTG...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGTTTGGCAATAAGCCATaGTGTAACCCCCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: SDVIKGLLINMLASEVAQFGNKP*CNPLEM
Trigger: CATCTCAAGGGGGTTACACCATGGCTTATTGCCAAA...CTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCGTATTTCAACCAAAGTaGCCACATGAGCCCACAATA +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPVFQPK*PHEPTI
Trigger: TATTGTGGGCTCATGTGGCCACTTTGGTTGAAATAC...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTTCAAAATGCTAAACTaGCTTAGGGGTGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPFKMLN*LRGVEC
Trigger: ACATTCCACACCCCTAAGCCAGTTTAGCATTTTGAA...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTTTTGGAGCACAGGATaGAGAAAGATTAAGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SSMPGSALISGSTAFFIPFWSTG*RKIKCQ
Trigger: TTGACACTTAATCTTTCTCCATCCTGTGCTCCAAAA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTGCATCAGTATGTTTTTaGAGCACAGGATGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIASVCF*STGWRK
Trigger: CTTTCTCCATCCTGTGCTCCAAAAACATACTGATGC...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGACCATAGTCTTGAGGTaGTCCAGGGTATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQTIVLR*SRVSGS
Trigger: GCTGCCTGATACCCTGGATCACCTCAAGACTATGGT...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTAAAGCCTGGTTCTCCTTaGGGACCAATGAAACCTGGT +
Preference number: 4 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLKPGSP*GPMKPG
Trigger: ACCAGGTTTCATTGGTCCTCAAGGAGAACCAGGCTT...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATTGCCGTTGTAGTCTATaGTCTCAGTGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINCRCSL*SQWLLD
Trigger: ATCAAGGAGCCACTGAGATCATAGACTACAACGGCA...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTTGCCGTTGTAGTCTATaGTCTCAGTGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFCRCSL*SQWLLD
Trigger: ATCAAGGAGCCACTGAGATCATAGACTACAACGGCA...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTAGAGTCAACGCCGACATaGAAGGTGAATGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLESTPT*KVNGNV
Trigger: CACATTCCCATTCACCTTTCATGTCGGCGTTGACTC...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATGGACCCTTATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGACCAAAGTGGCCACATaGGCCCACAATACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: MDPYIHNFMLERLDSSLLTKVAT*AHNTGS
Trigger: GCTTCCAGTATTGTGGGCTCATGTGGCCACTTTGGT...CAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATAAGGGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGACCAAAGTGGCCACATaGGCCCACAATACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQTKVAT*AHNTGS
Trigger: GCTTCCAGTATTGTGGGCTCATGTGGCCACTTTGGT...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAACCCAGAAGATGGCATTaGGTCAGGAGAGAAATTAAA +
Preference number: 4 (lower is better)
Translates to: DVIKGLLINMLASEVAQQPRRWH*VRREIK
Trigger: TTTAATTTCTCTCCTGACTCAATGCCATCTTCTGGG...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTTGGTGTCAGGTGGTTaGAAAACTGTAGCTAGAATA +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFILVSGG*KTVARI
Trigger: TATTCTAGCTACAGTTTTTCAACCACCTGACACCAA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTAAACCCAAGGAACCAATaGTACTCGCGAAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLNPRNQ*YSRSRS
Trigger: ACTTCGGCTTCGCGAGTAGCATTGGTTCCTTGGGTT...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTCCCTGGAATTCCAGGTaGTCCAATAGAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFPWNSR*SNRTLL
Trigger: CAAAAGGGTTCTATTGGAGCACCTGGAATTCCAGGG...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTACTATTCCAAAAGAAGTaGTGTGCCTCTGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVLFQKK*CASVIF
Trigger: AAAAATGACAGAGGCACAGCACTTCTTTTGGAATAG...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGCTATTCCAAAAGAAGTaGTGTGCCTCTGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: VISSATQVLVGWTSLFPQLFQKK*CASVIF
Trigger: AAAAATGACAGAGGCACAGCACTTCTTTTGGAATAG...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAAATGGGCTGAAAGGGTaGCTACTCCTCATTGATAAT +
Preference number: 4 (lower is better)
Translates to: DVIKGLLINMLASEVAQQNGLKG*LLLIDN
Trigger: ATTATCAATGAGGAGTAGGCACCCTTTCAGCCCATT...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACCCTTATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGTCGCCTGGAGGTCGTTaGTTTTCACACCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: MDPYIHNFMLERLDSSLLSPGGR*FSHPGT
Trigger: TGTACCTGGGTGTGAAAACCAACGACCTCCAGGCGA...CAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATAAGGGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494183.5
CDS-3UTR CCA 90 bp GATTATCCATCATGGTTAAGACCTAGCAATTCCACTGAACAAGGAGGAGTATTTTTGCCCATTCATCCCTaGAATTCCAGGTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: DYPSWLRPSNSTEQGGVFLPIHP*NSRCSN
Trigger: ATTGGAGCACCTGGAATTCCAGGGATGAATGGGCAA...AAATACTCCTCCTTGTTCAGTGGAATTGCTAGGTCTTAACCATGATGGATAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTTCTCCCTTAGGTCCTaGTATTCCATTCTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWFSLRS*YSILSY
Trigger: GTAGGACAGAATGGAATACCAGGACCTAAGGGAGAA...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TGGTCACCATTTCATGTAAACTATTTCATGGCACTTTTTGTCCATGCAATTAGCAGGACCAATGAAACCTaGTTCTCCCTTTATCCCCGG +
Preference number: 4 (lower is better)
Translates to: WSPFHVNYFMALFVHAISRTNET*FSLYPR
Trigger: CCGGGGATAAAGGGAGAACCAGGTTTCATTGGTCCT...GCTAATTGCATGGACAAAAAGTGCCATGAAATAGTTTACATGAAATGGTGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTTTCACCTGTCATACCTaGGTCCCCCATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVFTCHT*VPHVSL
Trigger: AAGGGAGACATGGGGGACCCAGGTATGACAGGTGAA...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTTTGCAGGATTCTCACTaGTTTCACAAATTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCLQDSH*FHKLPN
Trigger: ATTGGGCAATTTGTGAAACCAGTGAGAATCCTGCAA...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCACACAGCAAGCAGGTTTaGCACACAGTCATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAHSKQV*HTVMLF
Trigger: AAAAAGCATGACTGTGTGCCAAACCTGCTTGCTGTG...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTGTATTTCAACCAAAGTaGCCACATGAGCCCACAATA +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISVFQPK*PHEPTI
Trigger: TATTGTGGGCTCATGTGGCCACTTTGGTTGAAATAC...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTCAGCCCAAGGAAAACTaGTGGCAGCAACAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVQPKEN*WQQQAQ
Trigger: TTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGCTG...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCAATCAAGTTTTGGTGGGATaGACATCCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRKKQPYVNISQTCKICNQVLVG*TSLFPQ
Trigger: CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTG...ATTGCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGACAAGTTTTGGTGGGATaGACATCCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRQVLVG*TSLFPQ
Trigger: CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTG...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGCGGGAGAGGCGATTTTaGCTGATCCCTTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: VSIVHFHSFESIFGHHFMRERRF*LIPSQN
Trigger: GTTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCG...CATGAAATGGTGACCAAATATGGACTCAAAGCTATGAAAATGTACTATACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATAGGAAATGTTTGACATaGTTGGATCGTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHRKCLT*LDRRRK
Trigger: CTTCCTCCTACGATCCAACCATGTCAAACATTTCCT...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGAGGAAATGTTTGACATaGTTGGATCGTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DVSGVKMDMYTTASRKKQRKCLT*LDRRRK
Trigger: CTTCCTCCTACGATCCAACCATGTCAAACATTTCCT...CTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGAACTGGCTTAGGGGTGTaGAATGTTACCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGTGLGV*NVTRNV
Trigger: AACATTTCTGGTAACATTCCACACCCCTAAGCCAGT...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTAATATCCCAAGAAAAATaGGAAGAAGTAGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALISQEK*EEVGTD
Trigger: GTCAGTCCCTACTTCTTCCCATTTTTCTTGGGATAT...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACATATCCCAAGAAAAATaGGAAGAAGTAGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDISQEK*EEVGTD
Trigger: GTCAGTCCCTACTTCTTCCCATTTTTCTTGGGATAT...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp TGGTCACCATTTCATGTAAACTATTTCATGGCACTTTTTGTCCATGCAATTAGCCGTTTAATGAGCTGCTaGTCAGCAGAGAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: WSPFHVNYFMALFVHAISRLMSC*SAERNP
Trigger: TGGGTTTCTCTCTGCTGATCAGCAGCTCATTAAACG...GCTAATTGCATGGACAAAAAGTGCCATGAAATAGTTTACATGAAATGGTGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTACGTTTAATGAGCTGCTaGTCAGCAGAGAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLRLMSC*SAERNP
Trigger: TGGGTTTCTCTCTGCTGATCAGCAGCTCATTAAACG...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTAATTCCTGCAGCAGATaGTCCAGGGTCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVNSCSR*SRVTLF
Trigger: GAAAAGGGTGACCCTGGATCATCTGCTGCAGGAATT...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGACACAACTTCATGCTTaGAAGGTTAGATTCATCACT +
Preference number: 4 (lower is better)
Translates to: WLIPSQNMLFLQQPKFWWTQLHA*KVRFIT
Trigger: AGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGT...CCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACACACAACTTCATGCTTaGAAGGTTAGATTCATCACT +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDTQLHA*KVRFIT
Trigger: AGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGT...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCACACAACTTCATGCTTaGAAGGTTAGATTCATCACT +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPTQLHA*KVRFIT
Trigger: AGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGT...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGGAGTCAACGCCGACATaGAAGGTGAATGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQESTPT*KVNGNV
Trigger: CACATTCCCATTCACCTTTCATGTCGGCGTTGACTC...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATGGACCCTTATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGCAACATGCTAGCATCTaGAGTTGCACAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: MDPYIHNFMLERLDSSLLQHASI*SCTASR
Trigger: CCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTG...CAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATAAGGGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR TCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTAAGAGGCGATTTTGGCTaGTCCCTTCTCAGAACATGT +
Preference number: 4 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLRGDFG*SLLRTC
Trigger: ACATGTTCTGAGAAGGGATCAGCCAAAATCGCCTCT...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAACTATAAGCCAAGGATaGGTTAATTTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKTISQG*VNFPSG
Trigger: ACCAGAAGGGAAATTAACTCATCCTTGGCTTATAGT...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCAATTGTGTCAGACATTaGGCAATACGTTATCCTAAC +
Preference number: 4 (lower is better)
Translates to: TCYFFSNPSFGGMDIPFPNCVRH*AIRYPN
Trigger: GTTAGGATAACGTATTGCTCAATGTCTGACACAATT...GGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTTCTTCATTCCTCTCTaGAGACCTGATTCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: FSSMPGSALISGSTAFFIFFIPL*RPDSLN
Trigger: ATTTAAGGAATCAGGTCTTCAGAGAGGAATGAAGAA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR GCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp GTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGGGACATGTATACTACTaGCAGCAGGAAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSIVHFHSFESIFGHHFMGHVYY*QQEEAA
Trigger: GGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCC...CATGAAATGGTGACCAAATATGGACTCAAAGCTATGAAAATGTACTATACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGAGGACCAATGAAACCTaGTTCTCCCTTTATCCCCGG +
Preference number: 4 (lower is better)
Translates to: VSIVHFHSFESIFGHHFMRTNET*FSLYPR
Trigger: CCGGGGATAAAGGGAGAACCAGGTTTCATTGGTCCT...CATGAAATGGTGACCAAATATGGACTCAAAGCTATGAAAATGTACTATACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTAGGACCAATGAAACCTaGTTCTCCCTTTATCCCCGG +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVRTNET*FSLYPR
Trigger: CCGGGGATAAAGGGAGAACCAGGTTTCATTGGTCCT...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATCTCCTTTCATTCCATTaGCTCCCGGTAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHLLSFH*LPVIQE
Trigger: TTCCTGGATTACCGGGAGCCAATGGAATGAAAGGAG...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTTTGCAGGATTCTCACTaGTTTCACAAATTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: YTTASRKKQPYVNISQTCLQDSH*FHKLPN
Trigger: ATTGGGCAATTTGTGAAACCAGTGAGAATCCTGCAA...ACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAATTGCAGGATTCTCACTaGTTTCACAAATTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: TTASRKKQPYVNISQTCKLQDSH*FHKLPN
Trigger: ATTGGGCAATTTGTGAAACCAGTGAGAATCCTGCAA...TTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GAAATAGGAGGATCCATGATCCGAGTAAACACACATCATCTATTGGTACACTGTGTTAGTTTCAATGGGTaGTGTAGGTATGAGTCAACG +
Preference number: 4 (lower is better)
Translates to: EIGGSMIRVNTHHLLVHCVSFNG*CRYEST
Trigger: CGTTGACTCATACCTACACCACCCATTGAAACTAAC...ACAGTGTACCAATAGATGATGTGTGTTTACTCGGATCATGGATCCTCCTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAAGTTAGTTTCAATGGGTaGTGTAGGTATGAGTCAACG +
Preference number: 4 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKVSFNG*CRYEST
Trigger: CGTTGACTCATACCTACACCACCCATTGAAACTAAC...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCAGTATTTCAACCAAAGTaGCCACATGAGCCCACAATA +
Preference number: 4 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLAVFQPK*PHEPTI
Trigger: TATTGTGGGCTCATGTGGCCACTTTGGTTGAAATAC...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGATTCAAAATGCTAAACTaGCTTAGGGGTGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGFKMLN*LRGVEC
Trigger: ACATTCCACACCCCTAAGCCAGTTTAGCATTTTGAA...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCAAAGATTATCCATCATaGTTAAGACCTAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPKDYPS*LRPSNS
Trigger: GGAATTGCTAGGTCTTAACCATGATGGATAATCTTT...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGTGGGCAGTTACATTCTaGAGGTGCTTCTCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQWAVTF*RCFSCD
Trigger: ATCGCAAGAGAAGCACCTTCAGAATGTAACTGCCCA...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR TCA 90 bp AAGTATAGCCCTACTCTGGGTAAGACAATATATAGTGGGGAAAGAAAGGATAACGCAGAGAGAAACCCATaGTTGATTTTAGGAAACACC +
Preference number: 4 (lower is better)
Translates to: KYSPTLGKTIYSGERKDNAERNP*LILGNT
Trigger: GGTGTTTCCTAAAATCAATCATGGGTTTCTCTCTGC...GTTATCCTTTCTTTCCCCACTATATATTGTCTTACCCAGAGTAGGGCTATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAATGCCGTTGTAGTCTATaGTCTCAGTGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQCRCSL*SQWLLD
Trigger: ATCAAGGAGCCACTGAGATCATAGACTACAACGGCA...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCGTTGTAGTCTATaGTCTCAGTGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPCRCSL*SQWLLD
Trigger: ATCAAGGAGCCACTGAGATCATAGACTACAACGGCA...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTACACAACTTCATGCTTaGAAGGTTAGATTCATCACT +
Preference number: 4 (lower is better)
Translates to: MDMYTTASRKKQPYVNISTQLHA*KVRFIT
Trigger: AGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGT...AGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTAATTCTCTAATGGGCTaGAAGGGTGCCTACTCCTCA +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVNSLMG*KGAYSS
Trigger: TGAGGAGTAGGCACCCTTTCAGCCCATTAGAGAATT...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCAAATTCTCTAATGGGCTaGAAGGGTGCCTACTCCTCA +
Preference number: 4 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPNSLMG*KGAYSS
Trigger: TGAGGAGTAGGCACCCTTTCAGCCCATTAGAGAATT...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTTTGCCCATTCATCCCTaGAATTCCAGGTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVLPIHP*NSRCSN
Trigger: ATTGGAGCACCTGGAATTCCAGGGATGAATGGGCAA...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATGTTAGTTTCAATGGGTaGTGTAGGTATGAGTCAACG +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINVSFNG*CRYEST
Trigger: CGTTGACTCATACCTACACCACCCATTGAAACTAAC...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTACACAGCAAGCAGGTTTaGCACACAGTCATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLHSKQV*HTVMLF
Trigger: AAAAAGCATGACTGTGTGCCAAACCTGCTTGCTGTG...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATGTATTTCAACCAAAGTaGCCACATGAGCCCACAATA +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINVFQPK*PHEPTI
Trigger: TATTGTGGGCTCATGTGGCCACTTTGGTTGAAATAC...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGCAAGTTTTGGTGGGATaGACATCCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSIVHFHSFESIFGHHFMQVLVG*TSLFPQ
Trigger: CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTG...CATGAAATGGTGACCAAATATGGACTCAAAGCTATGAAAATGTACTATACTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGCAGCAACCCAAGTTTTaGTGGGATGGACATCCCTTT +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQQQPKF*WDGHPF
Trigger: AAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTG...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTCAGCAACCCAAGTTTTaGTGGGATGGACATCCCTTT +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVQQPKF*WDGHPF
Trigger: AAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTG...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACAGAAAGCCTGGTCATTaGACCATAATTATAGCAAAT +
Preference number: 4 (lower is better)
Translates to: HVYYCQQEEAALCKHISDRKPGH*TIIIAN
Trigger: ATTTGCTATAATTATGGTCCAATGACCAGGCTTTCT...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTAAGAAAGCCTGGTCATTaGACCATAATTATAGCAAAT +
Preference number: 4 (lower is better)
Translates to: KWSKNGHVYYCQQEEAALRKPGH*TIIIAN
Trigger: ATTTGCTATAATTATGGTCCAATGACCAGGCTTTCT...TAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGAAGTATAGCCCTACTCTaGGTAAGACAATATATAGTG +
Preference number: 4 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGSIALL*VRQYIV
Trigger: CACTATATATTGTCTTACCCAGAGTAGGGCTATACT...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTTTTCCCTTCTGGTGGTaGCACCTATGCATGAAACTA +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVFPFWW*HLCMKL
Trigger: TAGTTTCATGCATAGGTGTCACCACCAGAAGGGAAA...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAACTATAAGCCAAGGATaGGTTAATTTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRTISQG*VNFPSG
Trigger: ACCAGAAGGGAAATTAACTCATCCTTGGCTTATAGT...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATACTATAAGCCAAGGATaGGTTAATTTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINTISQG*VNFPSG
Trigger: ACCAGAAGGGAAATTAACTCATCCTTGGCTTATAGT...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TGGTCACCATTTCATGTAAACTATTTCATGGCACTTTTTGTCCATGCAATTAGCAATGGGCTGAAAGGGTaGCTACTCCTCATTGATAAT +
Preference number: 4 (lower is better)
Translates to: WSPFHVNYFMALFVHAISNGLKG*LLLIDN
Trigger: ATTATCAATGAGGAGTAGGCACCCTTTCAGCCCATT...GCTAATTGCATGGACAAAAAGTGCCATGAAATAGTTTACATGAAATGGTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACCCTTATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGTTCTCCCTTAGGTCCTaGTATTCCATTCTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: MDPYIHNFMLERLDSSLLFSLRS*YSILSY
Trigger: GTAGGACAGAATGGAATACCAGGACCTAAGGGAGAA...CAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATAAGGGTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR CCA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATTTGCAGGATTCTCACTaGTTTCACAAATTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINLQDSH*FHKLPN
Trigger: ATTGGGCAATTTGTGAAACCAGTGAGAATCCTGCAA...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCAATTTGCAGGATTCTCACTaGTTTCACAAATTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SRKKQPYVNISQTCKICNLQDSH*FHKLPN
Trigger: ATTGGGCAATTTGTGAAACCAGTGAGAATCCTGCAA...ATTGCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AAAATGCTAAACTGGCTTAGGGGTGTGGAATGTTACCAGAAATGTTACCAATTAGTTAGTTTCAATGGGTaGTGTAGGTATGAGTCAACG +
Preference number: 4 (lower is better)
Translates to: KMLNWLRGVECYQKCYQLVSFNG*CRYEST
Trigger: CGTTGACTCATACCTACACCACCCATTGAAACTAAC...TAATTGGTAACATTTCTGGTAACATTCCACACCCCTAAGCCAGTTTAGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGTTTGGCAATAAGCCATaGTGTAACCCCCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQFGNKP*CNPLEM
Trigger: CATCTCAAGGGGGTTACACCATGGCTTATTGCCAAA...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATACTGGCTTAGGGGTGTaGAATGTTACCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHTGLGV*NVTRNV
Trigger: AACATTTCTGGTAACATTCCACACCCCTAAGCCAGT...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAGATTATCCATCATaGTTAAGACCTAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: YTTASRKKQPYVNISQTCKDYPS*LRPSNS
Trigger: GGAATTGCTAGGTCTTAACCATGATGGATAATCTTT...ACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp CCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATAGAAAGCCTGGTCATTaGACCATAATTATAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PSQNMLFLQQPKFWWDGHRKPGH*TIIIAN
Trigger: ATTTGCTATAATTATGGTCCAATGACCAGGCTTTCT...ATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TCAGATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGAGAAAGCCTGGTCATTaGACCATAATTATAGCAAAT +
Preference number: 4 (lower is better)
Translates to: SDVIKGLLINMLASEVAQRKPGH*TIIIAN
Trigger: ATTTGCTATAATTATGGTCCAATGACCAGGCTTTCT...CTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TTTTGGCTGATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGAGTATAGCCCTACTCTaGGTAAGACAATATATAGTG +
Preference number: 4 (lower is better)
Translates to: FWLIPSQNMLFLQQPKFWSIALL*VRQYIV
Trigger: CACTATATATTGTCTTACCCAGAGTAGGGCTATACT...CCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGATCAGCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGGCAGAGAGAAACCCATaGTTGATTTTAGGAAACACC +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQAERNP*LILGNT
Trigger: GGTGTTTCCTAAAATCAATCATGGGTTTCTCTCTGC...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATTTCAGATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGACACAACTTCATGCTTaGAAGGTTAGATTCATCACT +
Preference number: 4 (lower is better)
Translates to: ISDVSGVKMDMYTTASRKTQLHA*KVRFIT
Trigger: AGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGT...CTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATCTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000512961.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGCCCAGAAGATGGCATTaGGTCAGGAGAGAAATTAAA +
Preference number: 4 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQPRRWH*VRREIK
Trigger: TTTAATTTCTCTCCTGACTCAATGCCATCTTCTGGG...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp GTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGCCCAGAAGATGGCATTaGGTCAGGAGAGAAATTAAA +
Preference number: 4 (lower is better)
Translates to: VSIVHFHSFESIFGHHFMPRRWH*VRREIK
Trigger: TTTAATTTCTCTCCTGACTCAATGCCATCTTCTGGG...CATGAAATGGTGACCAAATATGGACTCAAAGCTATGAAAATGTACTATACTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AAGTATAGCCCTACTCTGGGTAAGACAATATATAGTGGGGAAAGAAAGGATAACAATTGTGTCAGACATTaGGCAATACGTTATCCTAAC +
Preference number: 4 (lower is better)
Translates to: KYSPTLGKTIYSGERKDNNCVRH*AIRYPN
Trigger: GTTAGGATAACGTATTGCTCAATGTCTGACACAATT...GTTATCCTTTCTTTCCCCACTATATATTGTCTTACCCAGAGTAGGGCTATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp GTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGAATGGGCTGAAAGGGTaGCTACTCCTCATTGATAAT +
Preference number: 4 (lower is better)
Translates to: VSIVHFHSFESIFGHHFMNGLKG*LLLIDN
Trigger: ATTATCAATGAGGAGTAGGCACCCTTTCAGCCCATT...CATGAAATGGTGACCAAATATGGACTCAAAGCTATGAAAATGTACTATACTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp ATGGACCCTTATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGACTGGCTTAGGGGTGTaGAATGTTACCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: MDPYIHNFMLERLDSSLLTGLGV*NVTRNV
Trigger: AACATTTCTGGTAACATTCCACACCCCTAAGCCAGT...CAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATAAGGGTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR CCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATTTCAAAATGCTAAACTaGCTTAGGGGTGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHFKMLN*LRGVEC
Trigger: ACATTCCACACCCCTAAGCCAGTTTAGCATTTTGAA...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCAACTATAAGCCAAGGATaGGTTAATTTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPTISQG*VNFPSG
Trigger: ACCAGAAGGGAAATTAACTCATCCTTGGCTTATAGT...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR GCA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATGAAAAAGTCTTCTTATaGCCAAAAGGACGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHEKVFL*PKGRFF
Trigger: AAAGAACCGTCCTTTTGGGCATAAGAAGACTTTTTC...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATTCAAAATGCTAAACTaGCTTAGGGGTGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPFKMLN*LRGVEC
Trigger: ACATTCCACACCCCTAAGCCAGTTTAGCATTTTGAA...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR TCA 90 bp ATGGACCCTTATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTTTTGAATTGTGTCAGACATTaGGCAATACGTTATCCTAAC +
Preference number: 4 (lower is better)
Translates to: MDPYIHNFMLERLDSSLLNCVRH*AIRYPN
Trigger: GTTAGGATAACGTATTGCTCAATGTCTGACACAATT...CAAAAGTGATGAATCTAACCTTTCAAGCATGAAGTTGTGTATATAAGGGTCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR TCA 90 bp TCTTTCAATGTAACACTTCCACTTAGAATAAGCCATTTCAAAACACGCTACCAAATCTTATGCATCTTTTaGTACAGTAATGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SFNVTLPLRISHFKTRYQILCIF*YSNVSW
Trigger: CCAGCTGACATTACTGTATCAAAAGATGCATAAGAT...TTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGGAAGTGTTACATTGAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR GCA 90 bp AACCATTTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCACTATTCCAAAAGAAGTaGTGTGCCTCTGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: NHLRQIVSDIEQYVILTPLFQKK*CASVIF
Trigger: AAAAATGACAGAGGCACAGCACTTCTTTTGGAATAG...TGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAAATGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp TGGTCACCATTTCATGTAAACTATTTCATGGCACTTTTTGTCCATGCAATTAGCAGAAAGCCTGGTCATTaGACCATAATTATAGCAAAT +
Preference number: 4 (lower is better)
Translates to: WSPFHVNYFMALFVHAISRKPGH*TIIIAN
Trigger: ATTTGCTATAATTATGGTCCAATGACCAGGCTTTCT...GCTAATTGCATGGACAAAAAGTGCCATGAAATAGTTTACATGAAATGGTGACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
3UTR CAA 72 bp TCTATACGGTGTGTGCAGACTTCTCTGATGCTAGTTTaGTCATGTTTCATCAAATCATATAAACTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: SIRCVQTSLMLV*SCFIKSYKLKD
Trigger: GTCTTTTAGTTTATATGATTTGATGAAACATGACAAAACTAGCATCAGAGAAGTCTGCACACACCGTATAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000642955.1
CDS-3UTR CCA 90 bp GTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGAAAGATTATCCATCATaGTTAAGACCTAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: VSIVHFHSFESIFGHHFMKDYPS*LRPSNS
Trigger: GGAATTGCTAGGTCTTAACCATGATGGATAATCTTT...CATGAAATGGTGACCAAATATGGACTCAAAGCTATGAAAATGTACTATACTGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CCA 90 bp AGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGAAATGTTAAAGATTATCCATCATaGTTAAGACCTAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: RISHFKTRYQLFTVQRNVKDYPS*LRPSNS
Trigger: GGAATTGCTAGGTCTTAACCATGATGGATAATCTTT...AACATTTCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS GCA 90 bp AGGAGGGCCGCCAGGACGGCACACGGGGGCATGGTCCGGGCACAATaGTGTTCGGCAGGGGTCGGGTCCTCGGATCTGGGCTCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: RRAARTAHGGMVRAQ*CSAGVGSSDLGSRP
Trigger: GGGCCGGGAGCCCAGATCCGAGGACCCGACCCCTGCCGAACAGCATTGTGCCCGGACCATGCCCCCGTGTGCCGTCCTGGCGGCCCTCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399126.1
ENST00000399127.5
ENST00000399132.6
ENST00000494183.5
ENST00000505591.1
ENST00000642955.1
CDS CCA 90 bp TTCCGACTCCCAGAGGACCGACACCTCTTTCGAGGGCCCCAACAGTaGCCGCTCAGGGTCCGAGGGCAACGGCCGAGGCGCCACGCGGGG +
Preference number: 5 (lower is better)
Translates to: FRLPEDRHLFRGPQQ*PLRVRGQRPRRHAG
Trigger: CCCCGCGTGGCGCCTCGGCCGTTGCCCTCGGACCCTGAGCGGCCACTGTTGGGGCCCTCGAAAGAGGTGTCGGTCCTCTGGGAGTCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399126.1
ENST00000399132.6
ENST00000642955.1
CDS CCA 90 bp CGGCCACCACTGACAGGAGGGCCGCCAGGACGGCACACGGGGGCATaGTCCGGGCACAATGCTGTTCGGCAGGGGTCGGGTCCTCGGATC +
Preference number: 5 (lower is better)
Translates to: RPPLTGGPPGRHTGA*SGHNAVRQGSGPRI
Trigger: GATCCGAGGACCCGACCCCTGCCGAACAGCATTGTGCCCGGACCATGCCCCCGTGTGCCGTCCTGGCGGCCCTCCTGTCAGTGGTGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399126.1
ENST00000399127.5
ENST00000399132.6
ENST00000494183.5
ENST00000505591.1
ENST00000642955.1
CDS GCA 90 bp GTCGGGTCCTCGGATCTGGGCTCCCGGCCCCCTCCTTTCCCTGCGTaGTTCTTCAGCAGCATCGTGGCGGGGTCGGCCGTCTCGGCTTCG +
Preference number: 5 (lower is better)
Translates to: VGSSDLGSRPPPFPA*FFSSIVAGSAVSAS
Trigger: CGAAGCCGAGACGGCCGACCCCGCCACGATGCTGCTGAAGAAGCACGCAGGGAAAGGAGGGGGCCGGGAGCCCAGATCCGAGGACCCGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399126.1
ENST00000399127.5
ENST00000399132.6
ENST00000494183.5
ENST00000505591.1
ENST00000642955.1
CDS CCA 90 bp GCTCCCGGCCCCCTCCTTTCCCTGCGTGCTTCTTCAGCAGCATCGTaGCGGGGTCGGCCGTCTCGGCTTCGCTTCCCACCCTCTACACCT +
Preference number: 5 (lower is better)
Translates to: APGPLLSLRASSAAS*RGRPSRLRFPPSTP
Trigger: AGGTGTAGAGGGTGGGAAGCGAAGCCGAGACGGCCGACCCCGCCACGATGCTGCTGAAGAAGCACGCAGGGAAAGGAGGGGGCCGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399126.1
ENST00000399127.5
ENST00000399132.6
ENST00000494183.5
ENST00000505591.1
ENST00000642955.1
CDS TCA 90 bp GTTGGTTTTCACACCCAGGTACAGGCAAGACACCACGGCCACCACTaGCAGGAGGGCCGCCAGGACGGCACACGGGGGCATGGTCCGGGC +
Preference number: 5 (lower is better)
Translates to: VGFHTQVQARHHGHH*QEGRQDGTRGHGPG
Trigger: GCCCGGACCATGCCCCCGTGTGCCGTCCTGGCGGCCCTCCTGTCAGTGGTGGCCGTGGTGTCTTGCCTGTACCTGGGTGTGAAAACCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399126.1
ENST00000399127.5
ENST00000399132.6
ENST00000494183.5
ENST00000505591.1
ENST00000642955.1
CDS CCA 90 bp TGGTCCGGGCACAATGCTGTTCGGCAGGGGTCGGGTCCTCGGATCTaGGCTCCCGGCCCCCTCCTTTCCCTGCGTGCTTCTTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: WSGHNAVRQGSGPRI*APGPLLSLRASSAA
Trigger: TGCTGCTGAAGAAGCACGCAGGGAAAGGAGGGGGCCGGGAGCCCAGATCCGAGGACCCGACCCCTGCCGAACAGCATTGTGCCCGGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399126.1
ENST00000399127.5
ENST00000399132.6
ENST00000494183.5
ENST00000505591.1
ENST00000642955.1
CDS GCA 90 bp CGAAGCCGAAGTCGCGGCTGCCCGAAGGATCTCCGCAGCCCCGCGTaGGCGATCCTTAAATACCCTTCGCGATGCTCGCGTGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RSRSRGCPKDLRSPA*AILKYPSRCSRECV
Trigger: CACACACTCACGCGAGCATCGCGAAGGGTATTTAAGGATCGCGCACGCGGGGCTGCGGAGATCCTTCGGGCAGCCGCGACTTCGGCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS TCA 90 bp CGCGGCTCGCCCTGGCCACGGAGGACCGGACCTGTTGCGCCTCTGTaGGTTTGCCTTATTTCTACCTACTCGGTGTCTTTCGGCACGCCG +
Preference number: 5 (lower is better)
Translates to: RGSPWPRRTGPVAPL*VCLISTYSVSFGTP
Trigger: CGGCGTGCCGAAAGACACCGAGTAGGTAGAAATAAGGCAAACTCACAGAGGCGCAACAGGTCCGGTCCTCCGTGGCCAGGGCGAGCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399126.1
ENST00000399132.6
ENST00000642955.1
CDS GCA 90 bp CTAGTTGGTGGAGTCAAGCCCACGAGCGGATACGGACCCCTGCCTTaGTCAGCGTCCAGACCCGCAGGCGTGCACCATCCCCGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: LVGGVKPTSGYGPLP*SASRPAGVHHPRFL
Trigger: AAGAAAGCGGGGATGGTGCACGCCTGCGGGTCTGGACGCTGAGCAAGGCAGGGGTCCGTATCCGCTCGTGGGCTTGACTCCACCAACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399127.5
ENST00000642955.1
CDS GCA 90 bp GATCTCCGCAGCCCCGCGTGCGCGATCCTTAAATACCCTTCGCGATaGTCGCGTGAGTGTGTGTGTGAGTGTGTGAGTGCGCGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: DLRSPACAILKYPSR*SRECVCECVSARAL
Trigger: GAGCGCGCGCGCACTCACACACTCACACACACACTCACGCGAGCATCGCGAAGGGTATTTAAGGATCGCGCACGCGGGGCTGCGGAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR CAA 90 bp TTTTGCCAACAGCCAGGCATGGGTAAGCCATCTGGCCCCAACGGGCAGGGTGCACACCTTGTTTCCCCTTaGGTCCGGGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: FCQQPGMGKPSGPNGQGAHLVSP*VRGLQV
Trigger: AACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGTG...TGCACCCTGCCCGTTGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGCAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494183.5
CDS GCA 90 bp ATAAACCCAAGGAACCAATGCTACTCGCGAAGCCGAAGTCGCGGCTaGCCGAAGGATCTCCGCAGCCCCGCGTGCGCGATCCTTAAATAC +
Preference number: 5 (lower is better)
Translates to: INPRNQCYSRSRSRG*PKDLRSPACAILKY
Trigger: GTATTTAAGGATCGCGCACGCGGGGCTGCGGAGATCCTTCGGGCAGCCGCGACTTCGGCTTCGCGAGTAGCATTGGTTCCTTGGGTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS CCA 90 bp TCGATTCCTCCAAAGTTCAGTCCCTGTGGCTGCACAACTAGTTGGTaGAGTCAAGCCCACGAGCGGATACGGACCCCTGCCTTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SIPPKFSPCGCTTSW*SQAHERIRTPALLS
Trigger: GCTGAGCAAGGCAGGGGTCCGTATCCGCTCGTGGGCTTGACTCCACCAACTAGTTGTGCAGCCACAGGGACTGAACTTTGGAGGAATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399127.5
ENST00000642955.1
CDS-3UTR CAA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTCGCCTGTGTCACCCTaGGGGCCGTTCTCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKSPVSP*GPFSPA
Trigger: CGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCGA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCAATGGAAGGGGCCCCTTaGGCGGATTCGAGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: GLLINMLASEVAQQAGLAMEGAP*ADSRAA
Trigger: CGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCAT...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CAA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCATGGAAGGGGCCCCTTaGGCGGATTCGAGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSMEGAP*ADSRAA
Trigger: CGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCAT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGAGGCCCTGCCTGTCCTaGGTCACCCTTAATCAGGCG +
Preference number: 5 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKRPCLS*VTLNQA
Trigger: CGCCTGATTAAGGGTGACCAAGGACAGGCAGGGCCT...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR CAA 90 bp ACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATCACCTTGTTTCCCCTTaGGTCCGGGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: TGGSNRLNPFVFQPKWPHHLVSP*VRGLQV
Trigger: AACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGTG...ATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTTCACCTCTTTCTCCTTaGGGACCTGCAGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSSPLSP*GPAGPW
Trigger: CCATGGCCCTGCAGGTCCCAAAGGAGAAAGAGGTGA...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTATACGGACCCCTGCCTaGCTCAGCGTCCAGACCCGC +
Preference number: 5 (lower is better)
Translates to: SSMPGSALISGSTAFFIPIRTPA*LSVQTR
Trigger: GCGGGTCTGGACGCTGAGCAAGGCAGGGGTCCGTAT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCCACGATCCCCCTTaGGTCCGGGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: SSMPGSALISGSTAFFIPLHDPP*VRGLQV
Trigger: AACCTGGAGCCCCCGGACCAAAGGGGGATCGTGGAG...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR CAA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTATCGCCTGTGTCACCCTaGGGGCCGTTCTCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVSPVSP*GPFSPA
Trigger: CGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCGA...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGTCGCCTGTGTCACCCTaGGGGCCGTTCTCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLSPVSP*GPFSPA
Trigger: CGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCGA...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTCACCTCTTTCTCCTTaGGGACCTGCAGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKSPLSP*GPAGPW
Trigger: CCATGGCCCTGCAGGTCCCAAAGGAGAAAGAGGTGA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGCCATCTGGCCCCAATaGGCAAGGGGCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: VISSATQVLVGWTSLFPQAIWPQ*ARGIQP
Trigger: GGGCTGGATGCCCCTTGCCAATTGGGGCCAGATGGC...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
CDS-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTAGGCCCTGCCTGTCCTaGGTCACCCTTGACGGTGAG +
Preference number: 5 (lower is better)
Translates to: SSMPGSALISGSTAFFIPRPCLS*VTLDGE
Trigger: CTCACCGTCAAGGGTGACCAAGGACAGGCAGGGCCT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS TCA 90 bp TCCTACTTGCCTGTAAGGCTTCGTGGAGGTTGCCGTTGTAGTCTATaGTCTCAGTGGCTCCTTGATCCCCTTTTTGACCAGGTGGACCCC +
Preference number: 5 (lower is better)
Translates to: SYLPVRLRGGCRCSL*SQWLLDPLFDQVDP
Trigger: GGGGTCCACCTGGTCAAAAAGGGGATCAAGGAGCCACTGAGATCATAGACTACAACGGCAACCTCCACGAAGCCTTACAGGCAAGTAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622134.4
CDS-3UTR CAA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTATGGAAGGGGCCCCTTaGGCGGATTCGAGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: FSSMPGSALISGSTAFFIMEGAP*ADSRAA
Trigger: CGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCAT...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACCCCGGGCTCACCCTTTaGCCCATTCATCCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDPGLTL*PIHPWN
Trigger: ATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGGG...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTTCGCCTGTGTCACCCTaGGGGCCGTTCTCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: FSSMPGSALISGSTAFFISPVSP*GPFSPA
Trigger: CGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCGA...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp GACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGTCGCCTGTGTCACCCTaGGGGCCGTTCTCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: DMYTTASRKKQPYVNISQSPVSP*GPFSPA
Trigger: CGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCGA...CTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp GGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAGCAGGTTTGGCACCCTGGTTCACCCTTTaGCCCTGGACGACCAGATTC +
Preference number: 5 (lower is better)
Translates to: GLLINMLASEVAQQAGLAPWFTL*PWTTRF
Trigger: GAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGGG...TGCCAAACCTGCTTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCACCTTGTTTCCCCTTaGGTCCGGGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSHLVSP*VRGLQV
Trigger: AACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGTG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR CAA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTGACCATCTGTACCCTTaGGTCCAGGAAGTCCATGAG +
Preference number: 5 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSDHLYP*VQEVHE
Trigger: CTCATGGACTTCCTGGACCAAAGGGTACAGATGGTC...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000622134.4
CDS-3UTR CAA 90 bp GCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCGCCATCTGGCCCCAATaGGCAAGGGGCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: ASRKKQPYVNISQTCKICAIWPQ*ARGIQP
Trigger: GGGCTGGATGCCCCTTGCCAATTGGGGCCAGATGGC...GCAGATTTTACAAGTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
CDS GCA 90 bp AAGGAAAGAAAAAGGTCGATTCCTCCAAAGTTCAGTCCCTGTGGCTaGACAACTAGTTGGTGGAGTCAAGCCCACGAGCGGATACGGACC +
Preference number: 5 (lower is better)
Translates to: KERKRSIPPKFSPCG*TTSWWSQAHERIRT
Trigger: GGTCCGTATCCGCTCGTGGGCTTGACTCCACCAACTAGTTGTGCAGCCACAGGGACTGAACTTTGGAGGAATCGACCTTTTTCTTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399127.5
ENST00000642955.1
CDS-3UTR CAA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTGGAGGACCGGACCTGTaGCGCCTCTGTGAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: FSSMPGSALISGSTAFFIGGPDL*RLCEFA
Trigger: GGCAAACTCACAGAGGCGCAACAGGTCCGGTCCTCC...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399126.1
CDS-3UTR CAA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCTCGCCTGGAGGTCGTaGGTTTTCACACCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSLAWRS*VFTPRY
Trigger: GTACCTGGGTGTGAAAACCAACGACCTCCAGGCGAG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAATGGAAGGGGCCCCTTaGGCGGATTCGAGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: DVIKGLLINMLASEVAQQMEGAP*ADSRAA
Trigger: CGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCAT...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCCCGGGCTCACCCTTTaGCCCATTCATCCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: SSMPGSALISGSTAFFIPPGLTL*PIHPWN
Trigger: ATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGGG...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCCCGGGCTCACCCTTTaGCCCATTCATCCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSPGLTL*PIHPWN
Trigger: ATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGGG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCCCTGGTTCACCCTTTaGCCCTGGACGACCAGATTC +
Preference number: 5 (lower is better)
Translates to: SSMPGSALISGSTAFFIPPWFTL*PWTTRF
Trigger: GAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGGG...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCCCCTGGTTCACCCTTTaGCCCTGGACGACCAGATTC +
Preference number: 5 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSPWFTL*PWTTRF
Trigger: GAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGGG...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGGATCTCAGTGGCTCCTaGATCCCCTTTTTGACCAGG +
Preference number: 5 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKDLSGS*IPFLTR
Trigger: CCTGGTCAAAAAGGGGATCAAGGAGCCACTGAGATC...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp AGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATGAGCCCACAGATCTCAGTGGCTCCTaGATCCCCTTTTTGACCAGG +
Preference number: 5 (lower is better)
Translates to: SNRLNPFVFQPKWPHEPTDLSGS*IPFLTR
Trigger: CCTGGTCAAAAAGGGGATCAAGGAGCCACTGAGATC...TGTGGGCTCATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp AGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATGAGCCCACATCGGGAGAGGCGATTTaGGCTGATCCCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SNRLNPFVFQPKWPHEPTSGEAI*ADPFSE
Trigger: TTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGA...TGTGGGCTCATGTGGCCACTTTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTCGCTCCACTTTCTCTaGCACCATAGTCTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKSLHFL*HHSLEV
Trigger: CACCTCAAGACTATGGTGCAAGAGAAAGTGGAGCGA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp GCCCAAGGAAAACTGGTGGCAGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGGTCCCTGATCACCTaGTTCTCCCTTATCGCCTTT +
Preference number: 5 (lower is better)
Translates to: AQGKLVAATGSTPSYFNQRSLIT*FSLIAF
Trigger: AAAGGCGATAAGGGAGAACAAGGTGATCAGGGACCT...TTGGTTGAAATACGAAGGGGTTGAGCCTGTTGCTGCCACCAGTTTTCCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp ATCGTAGGAGGAAGGAAAGCTCTCACAACAACTTTGGCACAGATTGTCCCAGTACCCTGGTTCACCCTTTaGCCCTGGACGACCAGATTC +
Preference number: 5 (lower is better)
Translates to: IVGGRKALTTTLAQIVPVPWFTL*PWTTRF
Trigger: GAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGGG...TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGCTTTCCTTCCTCCTACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCATCCCTGCTCTCCCTTaGGCCCTTGTAGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSIPALP*ALVVLE
Trigger: CTCAAGGACTACAAGGGCCAAAGGGAGAGCAGGGAT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTATCCCTGCTCTCCCTTaGGCCCTTGTAGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: SSMPGSALISGSTAFFIPIPALP*ALVVLE
Trigger: CTCAAGGACTACAAGGGCCAAAGGGAGAGCAGGGAT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTCTCCCTTTGAGCCTTaGAGTCCCTGCTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: SSMPGSALISGSTAFFIPSPFEP*SPCSPS
Trigger: GGATGGAGAGCAGGGACTCAAAGGCTCAAAGGGAGA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp GCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCTCTGAAGTCTCCTTTCATTCCATaGGCTCCCGGTAATCCAGGA +
Preference number: 5 (lower is better)
Translates to: ARQCPYIWQYSLLHSSLKSPFIP*APGNPG
Trigger: TCCTGGATTACCGGGAGCCAATGGAATGAAAGGAGA...CTTCAGAGAGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp CTCTTTCCTACTTGGTCACATGAGAGGCAGTGCTGGAGGCTGAATCGGTCCTCTGCTCTCACAACAACTTaGGCACAGATTGTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: LFPTWSHERQCWRLNRSSALTTT*AQIVPV
Trigger: TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGC...AGAGGACCGATTCAGCCTCCAGCACTGCCTCTCATGTGACCAAGTAGGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTACCCTGGTTCACCCTTaGGTCCAGGAAGTCCATGAG +
Preference number: 5 (lower is better)
Translates to: SSMPGSALISGSTAFFIPTLVHP*VQEVHE
Trigger: CTCATGGACTTCCTGGACCAAAGGGTGAACCAGGGT...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS TCA 90 bp CGTTCACCTTTTGTTCCTGGTAAACCTGGTAAGCCTGGTTCTCCTTaGGGACCAATGAAACCTGGTTCTCCCTTTATCCCCGGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: RSPFVPGKPGKPGSP*GPMKPGSPFIPGSP
Trigger: TGGACTTCCGGGGATAAAGGGAGAACCAGGTTTCATTGGTCCTCAAGGAGAACCAGGCTTACCAGGTTTACCAGGAACAAAAGGTGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399126.1
ENST00000399127.5
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS TCA 90 bp AAGCCAGATGCTCCTGGAAGACCAAGGGGTCCTCTGTCACCCTTTTaGCCTGGTTCACCCTTCAATCCTTTAACACCATTTAACCCTGGT +
Preference number: 5 (lower is better)
Translates to: KPDAPGRPRGPLSPF*PGSPFNPLTPFNPG
Trigger: ACCAGGGTTAAATGGTGTTAAAGGATTGAAGGGTGAACCAGGTCAAAAGGGTGACAGAGGACCCCTTGGTCTTCCAGGAGCATCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399127.5
ENST00000642955.1
CDS-3UTR CAA 90 bp TTTTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCTCGCCTGGAGGTCGTaGGTTTTCACACCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: FSSMPGSALISGSTAFFILAWRS*VFTPRY
Trigger: GTACCTGGGTGTGAAAACCAACGACCTCCAGGCGAG...AATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTCTCGCCTGGAGGTCGTaGGTTTTCACACCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCLAWRS*VFTPRY
Trigger: GTACCTGGGTGTGAAAACCAACGACCTCCAGGCGAG...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CAA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAAGGCCCTGCCTGTCCTaGGTCACCCTTAATCAGGCG +
Preference number: 5 (lower is better)
Translates to: DVIKGLLINMLASEVAQQRPCLS*VTLNQA
Trigger: CGCCTGATTAAGGGTGACCAAGGACAGGCAGGGCCT...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTCCCGGGCTCACCCTTTaGCCCATTCATCCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCPGLTL*PIHPWN
Trigger: ATTCCAGGGATGAATGGGCAAAAGGGTGAGCCCGGG...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTCCCTGGTTCACCCTTTaGCCCTGGACGACCAGATTC +
Preference number: 5 (lower is better)
Translates to: WSKNGHVYYCQQEEAALCPWFTL*PWTTRF
Trigger: GAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGGG...ACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGGGACTCTCCTTTCATTCCATaGGCTCCCGGTAATCCAGGA +
Preference number: 5 (lower is better)
Translates to: FLQQPKFWWDGHPFSLRDSPFIP*APGNPG
Trigger: TCCTGGATTACCGGGAGCCAATGGAATGAAAGGAGA...GTCCCTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCGACCATCTGTACCCTTaGGTCCAGGAAGTCCATGAG +
Preference number: 5 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCDHLYP*VQEVHE
Trigger: CTCATGGACTTCCTGGACCAAAGGGTACAGATGGTC...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399132.6
ENST00000622134.4
CDS-3UTR CAA 90 bp CCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAAATAAATGCCATCTGGCCCCAATaGGCAAGGGGCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PLNKEEYFHPFVFPKEINAIWPQ*ARGIQP
Trigger: GGGCTGGATGCCCCTTGCCAATTGGGGCCAGATGGC...ATTTATTTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
CDS-3UTR CAA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTCGGGAGAGGCGATTTaGGCTGATCCCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCSGEAI*ADPFSE
Trigger: TTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGA...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp ATTCATCACTTTTGCCAACAGCCAGGCATGGGTAAGCCATCTGGCCCCAATTGGGCTCTCACAACAACTTaGGCACAGATTGTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: IHHFCQQPGMGKPSGPNWALTTT*AQIVPV
Trigger: TACTGGGACAATCTGTGCCAAAGTTGTTGTGAGAGC...CCAATTGGGGCCAGATGGCTTACCCATGCCTGGCTGTTGGCAAAAGTGATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610288.4
CDS-3UTR CAA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGACCCTGGTTCACCCTTaGGTCCAGGAAGTCCATGAG +
Preference number: 5 (lower is better)
Translates to: VISSATQVLVGWTSLFPQTLVHP*VQEVHE
Trigger: CTCATGGACTTCCTGGACCAAAGGGTGAACCAGGGT...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR CAA 90 bp ACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCTGTGCCTCTGAGCCAGATGCTCCCTTaGGTCCAGGAAGTCCATGAG +
Preference number: 5 (lower is better)
Translates to: TGSPIPRISYSKRSAVPLSQMLP*VQEVHE
Trigger: CTCATGGACTTCCTGGACCAAAGGGAGCATCTGGCT...CAGAGGCACAGCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494183.5
ENST00000610288.4
CDS-3UTR CAA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTCGCTCCACTTTCTCTaGCACCATAGTCTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSSLHFL*HHSLEV
Trigger: CACCTCAAGACTATGGTGCAAGAGAAAGTGGAGCGA...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp TTCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCAGGTCCCTGATCACCTaGTTCTCCCTTATCGCCTTT +
Preference number: 5 (lower is better)
Translates to: FFYARQCPYIWQYSLLHSRSLIT*FSLIAF
Trigger: AAAGGCGATAAGGGAGAACAAGGTGATCAGGGACCT...GGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399126.1
ENST00000399127.5
CDS-3UTR CAA 90 bp TCCCTCAGGGACAGGATCTCCCATTCCAAGAATCTCCTATTCCAAAAGAAGTGCAGGTCCCTGATCACCTaGTTCTCCCTTATCGCCTTT +
Preference number: 5 (lower is better)
Translates to: SLRDRISHSKNLLFQKKCRSLIT*FSLIAF
Trigger: AAAGGCGATAAGGGAGAACAAGGTGATCAGGGACCT...GCACTTCTTTTGGAATAGGAGATTCTTGGAATGGGAGATCCTGTCCCTGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp AGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAAAGGCCCTGCCTGTCCTaGGTCACCCTTAATCAGGCG +
Preference number: 5 (lower is better)
Translates to: SKNGHVYYCQQEEAALCKRPCLS*VTLNQA
Trigger: CGCCTGATTAAGGGTGACCAAGGACAGGCAGGGCCT...TTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp AAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCAAGGCCCTGCCTGTCCTaGGTCACCCTTAATCAGGCG +
Preference number: 5 (lower is better)
Translates to: KIQDKLCVCSPPPYLFLARPCLS*VTLNQA
Trigger: CGCCTGATTAAGGGTGACCAAGGACAGGCAGGGCCT...TGCCAAAAAGAGATAAGGTGGCGGAGAGCACACACACAATTTGTCTTGTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399132.6
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATTCGCCTGTGTCACCCTaGGGGCCGTTCTCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHSPVSP*GPFSPA
Trigger: CGCTGGAGAGAACGGCCCCAAGGGTGACACAGGCGA...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp GCAATTCCACTGAACAAGGAGGAGTATTTCCATCCCTTTGTTTTTCCCAAGGAACCCTGGTTCACCCTTTaGCCCTGGACGACCAGATTC +
Preference number: 5 (lower is better)
Translates to: AIPLNKEEYFHPFVFPKEPWFTL*PWTTRF
Trigger: GAATCTGGTCGTCCAGGGCAAAAGGGTGAACCAGGG...TTCCTTGGGAAAAACAAAGGGATGGAAATACTCCTCCTTGTTCAGTGGAATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp GTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCGATCTCAGTGGCTCCTaGATCCCCTTTTTGACCAGG +
Preference number: 5 (lower is better)
Translates to: VSGVKMDMYTTASRKKQPDLSGS*IPFLTR
Trigger: CCTGGTCAAAAAGGGGATCAAGGAGCCACTGAGATC...GGGCTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp CATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACATCCCTGCTCTCCCTTaGGCCCTTGTAGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: HVYYCQQEEAALCKHISDIPALP*ALVVLE
Trigger: CTCAAGGACTACAAGGGCCAAAGGGAGAGCAGGGAT...GTCTGAGATATGTTTACATAGGGCTGCTTCTTCCTGCTGGCAGTAGTATACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp ATCCCTTCTCAGAACATGTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGATCACCTCTTTCTCCTTaGGGACCTGCAGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: IPSQNMLFLQQPKFWWDGSPLSP*GPAGPW
Trigger: CCATGGCCCTGCAGGTCCCAAAGGAGAAAGAGGTGA...TCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAACATGTTCTGAGAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGTCGGGAGAGGCGATTTaGGCTGATCCCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: VISSATQVLVGWTSLFPQSGEAI*ADPFSE
Trigger: TTCTGAGAAGGGATCAGCCAAAATCGCCTCTCCCGA...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp TTAAGACAAATTGTGTCAGACATTGAGCAATACGTTATCCTAACACCATGCCATATACGGACCCCTGCCTaGCTCAGCGTCCAGACCCGC +
Preference number: 5 (lower is better)
Translates to: LRQIVSDIEQYVILTPCHIRTPA*LSVQTR
Trigger: GCGGGTCTGGACGCTGAGCAAGGCAGGGGTCCGTAT...ATGGCATGGTGTTAGGATAACGTATTGCTCAATGTCTGACACAATTTGTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642955.1
CDS-3UTR CAA 90 bp TCTTCTATGCCAGGCAGTGCCCTTATATCTGGCAGTACAGCCTTCTTCATTCCTTCCTCTGTCACCCTTTaGACCTGGTTCACCCTTCAA +
Preference number: 5 (lower is better)
Translates to: SSMPGSALISGSTAFFIPSSVTL*TWFTLQ
Trigger: TTGAAGGGTGAACCAGGTCAAAAGGGTGACAGAGGA...AGGAATGAAGAAGGCTGTACTGCCAGATATAAGGGCACTGCCTGGCATAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399127.5
CDS-3UTR CAA 90 bp GTTGATGTTGTCAAATCAGTTATAGAGCAAAAACTCAATATACACACAGGACAGATGGAAGGGGCCCCTTaGGCGGATTCGAGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: VDVVKSVIEQKLNIHTGQMEGAP*ADSRAA
Trigger: CGCCGCTCTCGAATCCGCCAAAGGGGCCCCTTCCAT...CTGTCCTGTGTGTATATTGAGTTTTTGCTCTATAACTGATTTGACAACATCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CAA 90 bp GTTATTTCTTCAGCAACCCAAGTTTTGGTGGGATGGACATCCCTTTTCCCTCAGTCGCTCCACTTTCTCTaGCACCATAGTCTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: VISSATQVLVGWTSLFPQSLHFL*HHSLEV
Trigger: CACCTCAAGACTATGGTGCAAGAGAAAGTGGAGCGA...CTGAGGGAAAAGGGATGTCCATCCCACCAAAACTTGGGTTGCTGAAGAAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000642955.1
CDS-3UTR CAA 90 bp CCACTTAGAATAAGCCATTTCAAAACACGCTACCAACTCTTTACTGTGCAAAGACACCTTGTTTCCCCTTaGGTCCGGGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: PLRISHFKTRYQLFTVQRHLVSP*VRGLQV
Trigger: AACCTGGAGCCCCCGGACCAAAGGGGAAACAAGGTG...TCTTTGCACAGTAAAGAGTTGGTAGCGTGTTTTGAAATGGCTTATTCTAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp GATGTAATCAAAGGACTCCTGATCAACATGCTAGCATCTGAAGTTGCACAGCAAATCCCTGCTCTCCCTTaGGCCCTTGTAGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: DVIKGLLINMLASEVAQQIPALP*ALVVLE
Trigger: CTCAAGGACTACAAGGGCCAAAGGGAGAGCAGGGAT...TTGCTGTGCAACTTCAGATGCTAGCATGTTGATCAGGAGTCCTTTGATTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399132.6
ENST00000494183.5
ENST00000610288.4
ENST00000622134.4
ENST00000642955.1
CDS-3UTR CAA 90 bp GATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGTCTCCCTTTGAGCCTTaGAGTCCCTGCTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: DVSGVKMDMYTTASRKKQSPFEP*SPCSPS
Trigger: GGATGGAGAGCAGGGACTCAAAGGCTCAAAGGGAGA...CTGCTTCTTCCTGCTGGCAGTAGTATACATGTCCATTTTTACTCCACTTACATC
48% GC, longest homopolymer 5 nt, total