RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL23A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000050767

Ensembl transcript IDs: ENST00000390654.8, ENST00000407622.3, ENST00000484750.1, ENST00000646779.1, ENST00000679888.1, ENST00000679896.1, ENST00000680268.1, ENST00000680889.1, ENST00000681261.1

Found 1050 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGG +
Preference number: 1 (lower is better)
Translates to: PECGRARPSWGISTH*SPGPAASAGRVLSG
Trigger: CCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp GCTGGCCTCCTGAGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGCTCCCCGGGCCCAGCCGCAAGTGCT +
Preference number: 1 (lower is better)
Translates to: AGLLRPPECGRARPS*GISTHCSPGPAASA
Trigger: AGCACTTGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCTCAGGAGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp TGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGCCCCCTGCTCAGGCCAGCTGGGAAC +
Preference number: 1 (lower is better)
Translates to: CWEHLLEVEKPLVRA*VGLVAGPLLRPAGN
Trigger: GTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp AAGCCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTaGCCTGTCCACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGG +
Preference number: 1 (lower is better)
Translates to: KPRPKGAPQVHISLV*PVHFPAASHAGGFG
Trigger: CCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp TGGGAAAGCCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTCCGGCAGCTTCACATGCCGGTGGCT +
Preference number: 1 (lower is better)
Translates to: WESPGPRVPLRYTSP*SGLSTFRQLHMPVA
Trigger: AGCCACCGGCATGTGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGCTTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp GTCCAGGCTGGGCCCCTCCATCCTCGACACTCTGCTCCCTGGAGCTaGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGG +
Preference number: 1 (lower is better)
Translates to: VQAGPLHPRHSAPWS*VHITAITELSHYSW
Trigger: CCAGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGGAGGGGCCCAGCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp CAGTCAGTCCAGGCTGGGCCCCTCCATCCTCGACACTCTGCTCCCTaGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAC +
Preference number: 1 (lower is better)
Translates to: QSVQAGPLHPRHSAP*SWVHITAITELSHY
Trigger: GTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR GCA 90 bp GAAGTAGCAGTCAGTCCAGGCTGGGCCCCTCCATCCTCGACACTCTaGTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: EVAVSPGWAPPSSTL*SLELGPHHSDHRAQ
Trigger: CTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGCTACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR GCA 90 bp CCCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTaGACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTG +
Preference number: 1 (lower is better)
Translates to: PCSGQLGTSPELCFA*TAHLESHFWPEFWV
Trigger: CACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp TTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGATGAGGCCAGGAGCAACAGCAGCCGC +
Preference number: 1 (lower is better)
Translates to: LSGGQVLSNCRGSWL*LSLEADEARSNSSR
Trigger: GCGGCTGCTGTTGCTCCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR TCA 90 bp TACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCTCCTaGGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTT +
Preference number: 1 (lower is better)
Translates to: YSWPEDMCSHGRLAS*GLLNVVELDPRGGF
Trigger: AAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCTCAGGAGGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR GCA 90 bp TGCTTCTACCTTCATCTCCTTCCTGGGAAAGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCC +
Preference number: 1 (lower is better)
Translates to: CFYLHLLPGKAQAQG*PSGTHLPGLACPLS
Trigger: GGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGGTAGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp CGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGAGCAACAGC +
Preference number: 1 (lower is better)
Translates to: RVLSGGQVLSNCRGS*LWLSLEADEARSNS
Trigger: GCTGTTGCTCCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp CTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCA +
Preference number: 1 (lower is better)
Translates to: LPGLACPLSGSFTCR*LWGWVGILLNVKRP
Trigger: TGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp GCCTGTCCACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCAT +
Preference number: 1 (lower is better)
Translates to: ACPLSGSFTCRWLWG*VGILLNVKRPQVAH
Trigger: ATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGTGGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp GGTCTGGCCTGTCCACTTTCCGGCAGCTTCACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTA +
Preference number: 1 (lower is better)
Translates to: GLACPLSGSFTCRWL*GWVGILLNVKRPQV
Trigger: TACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGTGGACAGGCCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR GCA 90 bp ACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTGAATGTTAAA +
Preference number: 1 (lower is better)
Translates to: THLPGLACPLSGSFT*RWLWGWVGILLNVK
Trigger: TTTAACATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp AGGCCTGCCTCCCTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTaGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGG +
Preference number: 1 (lower is better)
Translates to: RPASLVQAMSYLVPL*VIMETETGSSSQSR
Trigger: CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAGGGAGGCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR TCA 90 bp TCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGCATCTTTCTAGCCTTGCCCGAGCCA +
Preference number: 1 (lower is better)
Translates to: SYRAVPQLRVSLLIR*LKAQRSIFLALPEP
Trigger: TGGCTCGGGCAAGGCTAGAAAGATGCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp ATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGAGCTaGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAG +
Preference number: 1 (lower is better)
Translates to: ISIYTEMEGKQPGWS*LLGTLAGGGKASRQ
Trigger: CTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp ACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATaGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCT +
Preference number: 1 (lower is better)
Translates to: TVISIYTEMEGKQPG*SWLLGTLAGGGKAS
Trigger: AGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 90 bp CCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTaGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGG +
Preference number: 1 (lower is better)
Translates to: PRGSPQGQAHPDTHL*FITHSDLHLHGNGR
Trigger: CCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR TCA 90 bp AGGACAGGCACACCCAGACACGCACTTGTGGTTTATTACACACAGTaGTCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGA +
Preference number: 1 (lower is better)
Translates to: RTGTPRHALVVYYTQ*SPSTRKWKASSQDG
Trigger: TCCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTGTGCCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACTCCAGGGATCCCTGGTaGCCCTGGGGGCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHSRDPW*PWGPLW
Trigger: CCACAGGGGCCCCCAGGGCCACCAGGGATCCCTGGA...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGCCCTGGCTCCACTATaGGCTGAGCCAGGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQALAPL*AEPGSP
Trigger: AGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGC...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLPLVRA*VGLVAG
Trigger: GCCTGCCACCAGACCCACCCACGCTCTGACGAGAGG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCCAGGGATCCCTGGTaGCCCTGGGGGCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFSRDPW*PWGPLW
Trigger: CCACAGGGGCCCCCAGGGCCACCAGGGATCCCTGGA...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACGCCCTGGCTCCACTATaGGCTGAGCCAGGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHALAPL*AEPGSP
Trigger: AGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGC...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTGGGCCCAGCCGCAAGTaGTGGGCGAGTCTTGTCCGG +
Preference number: 2 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPGPSRK*WASLVR
Trigger: CCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCC...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCCACATCTCCCTGGTCTaGCCTGTCCACTTTCCGGCA +
Preference number: 2 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPHISLV*PVHFPA
Trigger: TGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTG...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTTCCAGGGATCCCTGGTaGCCCTGGGGGCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSSRDPW*PWGPLW
Trigger: CCACAGGGGCCCCCAGGGCCACCAGGGATCCCTGGA...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTGGACCCTGGATTCCCTaGAGGCCCATCGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPGPWIP*RPIGPG
Trigger: CCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCC...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGGAGACTTGGGGCCAGTaGGACCCAGACTCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLETWGQ*DPDSEW
Trigger: CCACTCAGAGTCTGGGTCTCACTGGCCCCAAGTCTC...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGCCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 2 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCTGGCTCCCCGGGTCTaGCCTTCTCTCCTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHLAPRV*PSLLWF
Trigger: GAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCCTGTGGGTCACTTATaGCAGCAGCCAGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLPVGHL*QQPGTG
Trigger: GCCTGTGCCTGGCTGCTGGCATAAGTGACCCACAGG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAACCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTCCCAGCCGCAAGTGCTaGGCGAGTCTTGTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSPSRKC*ASLVRG
Trigger: CCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGG...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCCCAGCCGCAAGTGCTaGGCGAGTCTTGTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: PAQASWEPALSFALPAQPPSRKC*ASLVRG
Trigger: CCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCAGCCCAGGCAGGCCGCTaGGGCCTCTCTCACCCGACG +
Preference number: 2 (lower is better)
Translates to: APQVHISLVWPVHFPAASAQAGR*GLSHPT
Trigger: CGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGC...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 90 bp TCCACTCACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAGGCAGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: STHCSPGPAASAGRV*SGGQVLSNCRGSWL
Trigger: CAACCAGCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTGAGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTGTCCGGGAGGCCCCTTaGGGGCATCCAAGATCCTGC +
Preference number: 2 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGVREAP*GHPRSC
Trigger: GCAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGAC...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCGTCCGGGAGGCCCCTTaGGGGCATCCAAGATCCTGC +
Preference number: 2 (lower is better)
Translates to: PAQASWEPALSFALPAQPVREAP*GHPRSC
Trigger: GCAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGAC...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTCCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 2 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCACATCTCCCTGGTCTaGCCTGTCCACTTTCCGGCA +
Preference number: 2 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLHISLV*PVHFPA
Trigger: TGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 2 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTCCAGGGATCCCTGGTaGCCCTGGGGGCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQSRDPW*PWGPLW
Trigger: CCACAGGGGCCCCCAGGGCCACCAGGGATCCCTGGA...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCTCTCCATCGATTCCTaGGGCACCGGGCAATCCAAG +
Preference number: 2 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHLSIDS*GTGQSK
Trigger: CTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCTCCATCCAAGCCCTTaGGACCCTGGATTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLLHPSP*DPGFPG
Trigger: TCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGCCCAGGCAGGCCGCTaGGGCCTCTCTCACCCGACG +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPAQAGR*GLSHPT
Trigger: CGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGC...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGGCCCAGGCAGGCCGCTaGGGCCTCTCTCACCCGACG +
Preference number: 2 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAAQAGR*GLSHPT
Trigger: CGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGC...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACGGCTGGTCCAGGCCTaGTGGTCCCGGCTCGCCCTT +
Preference number: 2 (lower is better)
Translates to: APQVHISLVWPVHFPAASRLVQA*WSRLAL
Trigger: AAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCG...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCGGCAGGCTGGCCTCCTaGGGCCTCCTGAATGTGGTA +
Preference number: 2 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSGRLAS*GLLNVV
Trigger: TACCACATTCAGGAGGCCTCAGGAGGCCAGCCTGCC...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGGTCCGGGAGGCCCCTTaGGGGCATCCAAGATCCTGC +
Preference number: 2 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRVREAP*GHPRSC
Trigger: GCAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGAC...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACGGCTCCACTATGAGCTaGGCCAGGCTCTCCTGTAGG +
Preference number: 2 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHGSTMS*ARLSCR
Trigger: CCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCC...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCGCCCTGGCTCCACTATaGGCTGAGCCAGGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSALAPL*AEPGSP
Trigger: AGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGC...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCAGGGCCCAGCCGCAAGTaGTGGGCGAGTCTTGTCCGG +
Preference number: 2 (lower is better)
Translates to: APQVHISLVWPVHFPAASGPSRK*WASLVR
Trigger: CCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCC...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCGGAGGCCTGCCTCCCTaGTCCAGGCCATGTCCTATC +
Preference number: 2 (lower is better)
Translates to: PAQASWEPALSFALPAQPGGLPP*SRPCPI
Trigger: GATAGGACATGGCCTGGACCAGGGAGGCAGGCCTCC...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCGACCCAGACTCTGAGTaGGAGGCCTGCCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: PAQASWEPALSFALPAQPDPDSE*EACLPG
Trigger: ACCAGGGAGGCAGGCCTCCCACTCAGAGTCTGGGTC...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCCCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAPLVRA*VGLVAG
Trigger: GCCTGCCACCAGACCCACCCACGCTCTGACGAGAGG...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTCCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 2 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 2 (lower is better)
Translates to: PRHSAPWSWVHITAITELGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTATGGTGGCAGGCCCCCTaGTCAGGCCAGCTGGGAACC +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLWWQAP*SGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCA...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGTGGCAGGCCCCCTaGTCAGGCCAGCTGGGAACC +
Preference number: 2 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAWWQAP*SGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCA...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCTGGCTCCCCGGGTCTaGCCTTCTCTCCTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: PAQASWEPALSFALPAQPLAPRV*PSLLWF
Trigger: GAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 2 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSTCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTCCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACCCAGCCGCAAGTGCTaGGCGAGTCTTGTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLPSRKC*ASLVRG
Trigger: CCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGG...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGCGTGGGTGGGTCTGGTaGCAGGCCCCCTGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARRGWVW*QAPCSG
Trigger: GCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACG...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGGGGCCAGGGGGCCCTaGCTCCACTATGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTGARGP*LHYELS
Trigger: GCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCC...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCCCAATAAGGCCCGGTaGGCCAACTGGCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGPNKAR*ANWPRQ
Trigger: CTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGG...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGG +
Preference number: 2 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFLSFGS*QPNKAR
Trigger: CCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAG...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCCCACGGGACACGGCTaGTCCAGGCCTGGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGPTGHG*SRPGGP
Trigger: GGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTGTACAGGTGTGAGCTaGGCCTGTGGGTCACTTATG +
Preference number: 2 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLCTGVS*ACGSLM
Trigger: CATAAGTGACCCACAGGCCCAGCTCACACCTGTACA...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 90 bp GGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: GPAASAGRVLSGGQV*SNCRGSWLWLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 2 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFSLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAGTCCGGGAGGCCCCTTaGGGGCATCCAAGATCCTGC +
Preference number: 2 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPVREAP*GHPRSC
Trigger: GCAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGAC...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCATCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: APQVHISLVWPVHFPAASSGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 2 (lower is better)
Translates to: PRHSAPWSWVHITAITELAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 2 (lower is better)
Translates to: GAPQVHISLVWPVHFPAATCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 2 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRTCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGC +
Preference number: 2 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHRARPS*GISTHC
Trigger: GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCT...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTCTCAGCCACTACTCCTaGCCAGAGGACATGTGCTCT +
Preference number: 2 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPLSHYS*PEDMCS
Trigger: AGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAG...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGAGCGTGGGTGGGTCTaGTGGCAGGCCCCCTGCTCA +
Preference number: 2 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRERGWV*WQAPCS
Trigger: TGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTC...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGATCGTCAGAGCGTGGGTaGGTCTGGTGGCAGGCCCCC +
Preference number: 2 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRSSERG*VWWQAP
Trigger: GGGGGCCTGCCACCAGACCCACCCACGCTCTGACGA...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGGGGGCCAGGGGGCCCTaGCTCCACTATGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARGARGP*LHYELS
Trigger: GCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCC...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCTCCATCCAAGCCCTTaGGACCCTGGATTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: PAQASWEPALSFALPAQPLHPSP*DPGFPG
Trigger: TCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGG +
Preference number: 2 (lower is better)
Translates to: PAQASWEPALSFALPAQPLSFGS*QPNKAR
Trigger: CCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCACCCGGCTCGCCCTTCTaGCCCTTCACTCCTTTCCGG +
Preference number: 2 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSPGSPF*PFTPFR
Trigger: CCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGG...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGACGGCTGGTCCAGGCCTaGTGGTCCCGGCTCGCCCTT +
Preference number: 2 (lower is better)
Translates to: FACTAHLESHFWPEFWVGRLVQA*WSRLAL
Trigger: AAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCG...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGGCAGGCTGGCCTCCTaGGGCCTCCTGAATGTGGTA +
Preference number: 2 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSGRLAS*GLLNVV
Trigger: TACCACATTCAGGAGGCCTCAGGAGGCCAGCCTGCC...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGGGCTCCACTATGAGCTaGGCCAGGCTCTCCTGTAGG +
Preference number: 2 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQGSTMS*ARLSCR
Trigger: CCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCC...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTASGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPSGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGGGCCCAGCCGCAAGTaGTGGGCGAGTCTTGTCCGG +
Preference number: 2 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLGPSRK*WASLVR
Trigger: CCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGGGGCCCAGCCGCAAGTaGTGGGCGAGTCTTGTCCGG +
Preference number: 2 (lower is better)
Translates to: MELVAGNTCWRWKSLSSEGPSRK*WASLVR
Trigger: CCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCC...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 2 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCATGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: APQVHISLVWPVHFPAASWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTASFTCR*LWGWVG
Trigger: GCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCT...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCTCAGCCACTACTCCTaGCCAGAGGACATGTGCTCT +
Preference number: 2 (lower is better)
Translates to: PAQASWEPALSFALPAQPLSHYS*PEDMCS
Trigger: AGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGGAGGCCTGCCTCCCTaGTCCAGGCCATGTCCTATC +
Preference number: 2 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVGGLPP*SRPCPI
Trigger: GATAGGACATGGCCTGGACCAGGGAGGCAGGCCTCC...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAGACCCAGACTCTGAGTaGGAGGCCTGCCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLDPDSE*EACLPG
Trigger: ACCAGGGAGGCAGGCCTCCCACTCAGAGTCTGGGTC...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGACCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRPLVRA*VGLVAG
Trigger: GCCTGCCACCAGACCCACCCACGCTCTGACGAGAGG...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGGACCCTGGATTCCCTaGAGGCCCATCGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLGPWIP*RPIGPG
Trigger: CCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGACTCCATCCAAGCCCTTaGGACCCTGGATTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRLHPSP*DPGFPG
Trigger: TCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAG...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGCCCAATAAGGCCCGGTaGGCCAACTGGCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARPNKAR*ANWPRQ
Trigger: CTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGG...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCTGTGAGCTGGGCCTGTaGGTCACTTATGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLACELGL*VTYASS
Trigger: GCTGCTGGCATAAGTGACCCACAGGCCCAGCTCACA...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCTCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 2 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLASLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGAGACTTGGGGCCAGTaGGACCCAGACTCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVETWGQ*DPDSEW
Trigger: CCACTCAGAGTCTGGGTCTCACTGGCCCCAAGTCTC...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAGCTGGGAACCAGCCCTaGGCTTTGCTTTGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLAGNQP*ALLCLH
Trigger: GTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGC...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCTGGGAACCAGCCCTaGGCTTTGCTTTGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVAGNQP*ALLCLH
Trigger: GTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGC...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARSGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGTGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTTGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCCATCCTCGACACTCTaGTCCCTGGAGCTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPPSSTL*SLELGP
Trigger: TGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCCTGTGGGTCACTTATaGCAGCAGCCAGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPPVGHL*QQPGTG
Trigger: GCCTGTGCCTGGCTGCTGGCATAAGTGACCCACAGG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRSFTCR*LWGWVG
Trigger: GCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCT...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAG +
Preference number: 2 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPNCRGS*LWLSLE
Trigger: CTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTT...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGGCAGTCAGTCCAGGCTaGGCCCCTCCATCCTCGACA +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARAVSPG*APPSST
Trigger: TGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGC...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGGGAGGCCTGCCTCCCTaGTCCAGGCCATGTCCTATC +
Preference number: 2 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGGGLPP*SRPCPI
Trigger: GATAGGACATGGCCTGGACCAGGGAGGCAGGCCTCC...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCCTGCTCAGGCCAGCTaGGAACCAGCCCTGAGCTTT +
Preference number: 2 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVPAQAS*EPALSF
Trigger: AAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCCTCTCCATCGATTCCTaGGGCACCGGGCAATCCAAG +
Preference number: 2 (lower is better)
Translates to: PRHSAPWSWVHITAITELLSIDS*GTGQSK
Trigger: CTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAG...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTAAGCCCTTGGGACCCTaGATTCCCTGGAGGCCCATC +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPKPLGP*IPWRPI
Trigger: GATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTT...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 90 bp GTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGAGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: VLSGGQVLSNCRGSW*WLSLEADEARSNSS
Trigger: GCTGCTGTTGCTCCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCTCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 2 (lower is better)
Translates to: PRHSAPWSWVHITAITELSLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: MELVAGNTCWRWKSLSSESGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 2 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGCCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 2 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACTCAGCCACTACTCCTaGCCAGAGGACATGTGCTCT +
Preference number: 2 (lower is better)
Translates to: APQVHISLVWPVHFPAASLSHYS*PEDMCS
Trigger: AGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAG...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLRHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGCAGTCAGTCCAGGCTaGGCCCCTCCATCCTCGACA +
Preference number: 2 (lower is better)
Translates to: FACTAHLESHFWPEFWVGAVSPG*APPSST
Trigger: TGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGC...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGG +
Preference number: 2 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVLSFGS*QPNKAR
Trigger: CCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGGATCTGTACAGGTGTaGGCTGGGCCTGTGGGTCAC +
Preference number: 2 (lower is better)
Translates to: FACTAHLESHFWPEFWVGGSVQV*AGPVGH
Trigger: GTGACCCACAGGCCCAGCTCACACCTGTACAGATCC...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: APQVHISLVWPVHFPAASLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCCATCCTCGACACTCTaGTCCCTGGAGCTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: MELVAGNTCWRWKSLSSEPSSTL*SLELGP
Trigger: TGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGG...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCACCAGCCCTGAGCTTTaGTTTGCCTGCACAGCCCAC +
Preference number: 2 (lower is better)
Translates to: RPPECGRARPSWGISTHCTSPEL*FACTAH
Trigger: GTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGT...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCAAGCCCATCTCGCCTaGTTCCCCTTTGAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: GSTTAESLSADQVTEGPTQAHLA*FPFESC
Trigger: GCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 2 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTTCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLSFTCR*LWGWVG
Trigger: GCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCT...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: GSTTAESLSADQVTEGPTPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCCCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 2 (lower is better)
Translates to: RPPECGRARPSWGISTHCPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGACCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 2 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 2 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCTCAGCCACTACTCCTaGCCAGAGGACATGTGCTCT +
Preference number: 2 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVLSHYS*PEDMCS
Trigger: AGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 2 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGRHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGATGGAGCTGGTTGCTaGGAACACTTGCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPDGAGC*EHLLEV
Trigger: CACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATC...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCAGCCAGGATGGAGCTaGTTGCTGGGAACACTTGCT +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPQPGWS*LLGTLA
Trigger: AGCAAGTGTTCCCAGCAACCAGCTCCATCCTGGCTG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCTCTCCATCGATTCCTaGGGCACCGGGCAATCCAAG +
Preference number: 2 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGLSIDS*GTGQSK
Trigger: CTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGCTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 2 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 2 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCCCAATAAGGCCCGGTaGGCCAACTGGCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: VPLWVIMETETGSSSQSRPNKAR*ANWPRQ
Trigger: CTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGG...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCTGTGAGCTGGGCCTGTaGGTCACTTATGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: RPPECGRARPSWGISTHCCELGL*VTYASS
Trigger: GCTGCTGGCATAAGTGACCCACAGGCCCAGCTCACA...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGTGTGAGCTGGGCCTGTaGGTCACTTATGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARCELGL*VTYASS
Trigger: GCTGCTGGCATAAGTGACCCACAGGCCCAGCTCACA...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGTCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 2 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGSLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACACTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTCTGGCTCCCCGGGTCTaGCCTTCTCTCCTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLLAPRV*PSLLWF
Trigger: GAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAG...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRARYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSRYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAG +
Preference number: 2 (lower is better)
Translates to: PRHSAPWSWVHITAITELNCRGS*LWLSLE
Trigger: CTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTT...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGC +
Preference number: 2 (lower is better)
Translates to: RPPECGRARPSWGISTHCRARPS*GISTHC
Trigger: GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCT...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCACGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 2 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSRHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTAAGCCCTTGGGACCCTaGATTCCCTGGAGGCCCATC +
Preference number: 2 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLKPLGP*IPWRPI
Trigger: GATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTT...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCCCGGCTCGCCCTTCTaGCCCTTCACTCCTTTCCGG +
Preference number: 2 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWPGSPF*PFTPFR
Trigger: CCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTTGTACAGGTGTGAGCTaGGCCTGTGGGTCACTTATG +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPCTGVS*ACGSLM
Trigger: CATAAGTGACCCACAGGCCCAGCTCACACCTGTACA...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGATCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 2 (lower is better)
Translates to: FACTAHLESHFWPEFWVGSLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGGAGACTTGGGGCCAGTaGGACCCAGACTCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEETWGQ*DPDSEW
Trigger: CCACTCAGAGTCTGGGTCTCACTGGCCCCAAGTCTC...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCCTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: RPPECGRARPSWGISTHCLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCCAAGTCTTGTCCAACTaGAGAGGCAGCTGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: RPPECGRARPSWGISTHCQVLSN*RGSWLW
Trigger: CCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTG...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCAAGTCTTGTCCAACTaGAGAGGCAGCTGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGQVLSN*RGSWLW
Trigger: CCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTACCAGCCCTGAGCTTTaGTTTGCCTGCACAGCCCAC +
Preference number: 2 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLTSPEL*FACTAH
Trigger: GTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGT...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCACGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWSFTCR*LWGWVG
Trigger: GCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCT...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARRYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPRGSWL*LSLEAD
Trigger: ATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCT...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVRGSWL*LSLEAD
Trigger: ATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCT...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTARGSWL*LSLEAD
Trigger: ATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCT...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGC +
Preference number: 2 (lower is better)
Translates to: MELVAGNTCWRWKSLSSERARPS*GISTHC
Trigger: GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCT...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTTCCTCCTTTGGTTTCTaGGATGGCTCTTACTCAGGG +
Preference number: 2 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPSSFGF*DGSYSG
Trigger: CCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGA...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: VPLWVIMETETGSSSQSRIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 2 (lower is better)
Translates to: GSTTAESLSADQVTEGPTLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGCTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGGCTGGGAACCAGCCCTaGGCTTTGCTTTGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWAGNQP*ALLCLH
Trigger: GTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGC...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTCAAGTCTTGTCCAACTaGAGAGGCAGCTGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLQVLSN*RGSWLW
Trigger: CCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTG...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTRYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: VPLWVIMETETGSSSQSRTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAG +
Preference number: 2 (lower is better)
Translates to: SNCRGSWLWLSLEADEARNCRGS*LWLSLE
Trigger: CTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTT...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCCAGCCGCAAGTGCTaGGCGAGTCTTGTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQPSRKC*ASLVRG
Trigger: CCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGG...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTCTCAGCCACTACTCCTaGCCAGAGGACATGTGCTCT +
Preference number: 2 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLLSHYS*PEDMCS
Trigger: AGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAG...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCCTGCTCAGGCCAGCTaGGAACCAGCCCTGAGCTTT +
Preference number: 2 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWPAQAS*EPALSF
Trigger: AAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAACGTGGGTGGGTCTGGTaGCAGGCCCCCTGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: TRTCGLLHTVISIYTEMERGWVW*QAPCSG
Trigger: GCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACG...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGCTCTCCATCGATTCCTaGGGCACCGGGCAATCCAAG +
Preference number: 2 (lower is better)
Translates to: LVQAMSYLVPLWVIMETELSIDS*GTGQSK
Trigger: CTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAG...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAGGGGCCAGGGGGCCCTaGCTCCACTATGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGGARGP*LHYELS
Trigger: GCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCC...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAGGACCCTGGATTCCCTaGAGGCCCATCGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGGPWIP*RPIGPG
Trigger: CCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCC...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGAAGCCCTTGGGACCCTaGATTCCCTGGAGGCCCATC +
Preference number: 2 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWKPLGP*IPWRPI
Trigger: GATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTT...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 90 bp TGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTaGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGA +
Preference number: 2 (lower is better)
Translates to: CPRGSPQGQAHPDTH*WFITHSDLHLHGNG
Trigger: TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: FACTAHLESHFWPEFWVGGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCATGGTGGCAGGCCCCCTaGTCAGGCCAGCTGGGAACC +
Preference number: 2 (lower is better)
Translates to: LWFITHSDLHLHGNGRQAWWQAP*SGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCA...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAG +
Preference number: 2 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSNCRGS*LWLSLE
Trigger: CTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTT...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGCAGCCAGGATGGAGCTaGTTGCTGGGAACACTTGCT +
Preference number: 2 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEQPGWS*LLGTLA
Trigger: AGCAAGTGTTCCCAGCAACCAGCTCCATCCTGGCTG...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: VPLWVIMETETGSSSQSRLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGGTTGCTGGGAACACTTaGTGGAGGTGGAAAAGCCTC +
Preference number: 2 (lower is better)
Translates to: VPLWVIMETETGSSSQSRVAGNT*WRWKSL
Trigger: GAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAAC...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGGCAGTCAGTCCAGGCTaGGCCCCTCCATCCTCGACA +
Preference number: 2 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQAVSPG*APPSST
Trigger: TGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGC...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCACCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: LWFITHSDLHLHGNGRQAPLVRA*VGLVAG
Trigger: GCCTGCCACCAGACCCACCCACGCTCTGACGAGAGG...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGTTTATTACACACAGTaGTCTCCATCTACACGGAAA +
Preference number: 2 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVVYYTQ*SPSTRK
Trigger: TTTCCGTGTAGATGGAGATCACTGTGTGTAATAAAC...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAGTTTATTACACACAGTaGTCTCCATCTACACGGAAA +
Preference number: 2 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLVYYTQ*SPSTRK
Trigger: TTTCCGTGTAGATGGAGATCACTGTGTGTAATAAAC...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGGGCTCCACTATGAGCTaGGCCAGGCTCTCCTGTAGG +
Preference number: 2 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQGSTMS*ARLSCR
Trigger: CCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCC...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGTGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGACCATCCTCGACACTCTaGTCCCTGGAGCTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGPSSTL*SLELGP
Trigger: TGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGG...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 2 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQTCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCTTTGGTTTCTGGGATaGCTCTTACTCAGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: VPLWVIMETETGSSSQSRLWFLG*LLLREG
Trigger: ACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAG...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGTCCTCCTTTGGTTTCTaGGATGGCTCTTACTCAGGG +
Preference number: 2 (lower is better)
Translates to: LVQAMSYLVPLWVIMETESSFGF*DGSYSG
Trigger: CCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGA...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR TCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGAGACTTGGGGCCAGTaGGACCCAGACTCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEETWGQ*DPDSEW
Trigger: CCACTCAGAGTCTGGGTCTCACTGGCCCCAAGTCTC...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR GCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAATGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 2 (lower is better)
Translates to: LWFITHSDLHLHGNGRQATCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAAAGCCCTTGGGACCCTaGATTCCCTGGAGGCCCATC +
Preference number: 2 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEKPLGP*IPWRPI
Trigger: GATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTT...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGCACATCTCCCTGGTCTaGCCTGTCCACTTTCCGGCA +
Preference number: 2 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLHISLV*PVHFPA
Trigger: TGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTG...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAATCTGCTCCCTGGAGCTaGGTCCACATCACAGCGATC +
Preference number: 2 (lower is better)
Translates to: TRTCGLLHTVISIYTEMESAPWS*VHITAI
Trigger: GATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGA...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAACGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 2 (lower is better)
Translates to: TRTCGLLHTVISIYTEMERHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAGATGGAGCTGGTTGCTaGGAACACTTGCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGDGAGC*EHLLEV
Trigger: CACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATC...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGACAGCCAGGATGGAGCTaGTTGCTGGGAACACTTGCT +
Preference number: 2 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGQPGWS*LLGTLA
Trigger: AGCAAGTGTTCCCAGCAACCAGCTCCATCCTGGCTG...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQRYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGC +
Preference number: 2 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLRARPS*GISTHC
Trigger: GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCT...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGACCATCTACACGGAAATaGAAGGCAAGCAGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGPSTRK*KASSQD
Trigger: ATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGG...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: TRTCGLLHTVISIYTEMERGSWL*LSLEAD
Trigger: ATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCT...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAAACACTTGCTGGAGGTaGAAAAGCCTCTCGTCAGAG +
Preference number: 2 (lower is better)
Translates to: TRTCGLLHTVISIYTEMENTCWR*KSLSSE
Trigger: CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTT...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAAACACTTGCTGGAGGTaGAAAAGCCTCTCGTCAGAG +
Preference number: 2 (lower is better)
Translates to: LWFITHSDLHLHGNGRQANTCWR*KSLSSE
Trigger: CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTT...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp GGCACAGGCAGCCCGTCGGGGCCCACGGGACACGGCTaGTCCAGGCCTGGTGGTCCCGGCTCGCCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: GTGSPSGPTGHG*SRPGGPGSPFW
Trigger: CCAGAAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR GCA 72 bp GTCAGCGCCCGGGAGGCCGGACAAGCCCATCTCGCCTaGTTCCCCTTTGAGTCCTGCTGGCCCAGGCTCTCC +
Preference number: 3 (lower is better)
Translates to: VSAREAGQAHLA*FPFESCWPRLS
Trigger: GGAGAGCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTGTCCGGCCTCCCGGGCGCTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 3 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAACACCCTTCTCTCCCTTaGCTCCATCCAAGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQHPSLP*LHPSPW
Trigger: CCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTG...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR GCA 72 bp GGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTC +
Preference number: 3 (lower is better)
Translates to: GRARPSWGISTH*SPGPAASAGRV
Trigger: GACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp AGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTaGTGGCAGGCCCCCTGCTCAGGCCAGCTGGGAACC +
Preference number: 3 (lower is better)
Translates to: RWKSLSSERGWV*WQAPCSGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp TGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTaGGTCTGGTGGCAGGCCCCCTGCTCAGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: CWRWKSLSSERG*VWWQAPCSGQL
Trigger: CAGCTGGCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCACATGCCGGTGGCTTaGGGGCTGGGTGGGCATACT +
Preference number: 3 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSHMPVA*GLGGHT
Trigger: AGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTG...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTCACATGCCGGTGGCTTaGGGGCTGGGTGGGCATACT +
Preference number: 3 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPHMPVA*GLGGHT
Trigger: AGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTG...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSSAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTTCGCCTGCTTCCCCTTaGAGTCCTGCTGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSSPASP*SPAGPG
Trigger: GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGA...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACATCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGG +
Preference number: 3 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTSPFSP*RPSAPG
Trigger: CCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGA...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTTCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGG +
Preference number: 3 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTASPFSP*RPSAPG
Trigger: CCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGA...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp CACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGCCCCCTGCTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: HLLEVEKPLVRA*VGLVAGPLLRP
Trigger: TGGCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCACATGCCGGTGGCTTaGGGGCTGGGTGGGCATACT +
Preference number: 3 (lower is better)
Translates to: PAQASWEPALSFALPAQPHMPVA*GLGGHT
Trigger: AGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACA +
Preference number: 3 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLRDSRV*RGQVLT
Trigger: TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCT...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTTCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGSGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGSAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTAATCCAAGCTCGCCCTaGGCTCCAGGGATCCCTGGT +
Preference number: 3 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPNPSSP*APGIPG
Trigger: ACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATT...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGTCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGG +
Preference number: 3 (lower is better)
Translates to: SNCRGSWLWLSLEADEARSPFSP*RPSAPG
Trigger: CCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGA...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTGCTCCATCCAAGCCCTaGGGACCCTGGATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGAPSKP*GPWIPW
Trigger: CCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGC...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp GGGCCCCTCCATCCTCGACACTCTGCTCCCTGGAGCTaGGTCCACATCACAGCGATCACAGAGCTCAGCCAC +
Preference number: 3 (lower is better)
Translates to: GPLHPRHSAPWS*VHITAITELSH
Trigger: GTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGGAGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTAATCCAAGCTCGCCCTaGGCTCCAGGGATCCCTGGT +
Preference number: 3 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGNPSSP*APGIPG
Trigger: ACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATT...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCTCGCCTGCTTCCCCTTaGAGTCCTGCTGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGSPASP*SPAGPG
Trigger: GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGA...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAGCTCCATCCAAGCCCTaGGGACCCTGGATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRAPSKP*GPWIPW
Trigger: CCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGC...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACAGCATCTTTCTAGCCTaGCCCGAGCCAGGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHSIFLA*PEPGAS
Trigger: AGAAGCACCTGGCTCGGGCAAGGCTAGAAAGATGCT...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCAGCATCTTTCTAGCCTaGCCCGAGCCAGGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFSIFLA*PEPGAS
Trigger: AGAAGCACCTGGCTCGGGCAAGGCTAGAAAGATGCT...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTCCAGGATGGAGCTGGTaGCTGGGAACACTTGCTGGA +
Preference number: 3 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGPGWSW*LGTLAG
Trigger: TCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGG...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 3 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCATCGCCTGCTTCCCCTTaGAGTCCTGCTGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSSPASP*SPAGPG
Trigger: GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGA...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTGCCCTTCTCTCCTTaGGTTCCTGGCAGCCCAATA +
Preference number: 3 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSLPFSP*VPGSPI
Trigger: TATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAG...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCCTGCCCTTCTCTCCTTaGGTTCCTGGCAGCCCAATA +
Preference number: 3 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFLPFSP*VPGSPI
Trigger: TATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAG...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR GCA 72 bp CCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTG +
Preference number: 3 (lower is better)
Translates to: PGLACPLSGSFT*RWLWGWVGILL
Trigger: CAAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp CCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTCCGGCAGCTTCACATG +
Preference number: 3 (lower is better)
Translates to: PGPRVPLRYTSP*SGLSTFRQLHM
Trigger: CATGTGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTTGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPSAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGCTCCATCCAAGCCCTaGGGACCCTGGATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAAPSKP*GPWIPW
Trigger: CCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGC...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCACATGCCGGTGGCTTaGGGGCTGGGTGGGCATACT +
Preference number: 3 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGHMPVA*GLGGHT
Trigger: AGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACA +
Preference number: 3 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLARDSRV*RGQVLT
Trigger: TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCT...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACA +
Preference number: 3 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRRDSRV*RGQVLT
Trigger: TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCT...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGTCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: SNCRGSWLWLSLEADEARSGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: SNCRGSWLWLSLEADEARSAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 3 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTAATCCAAGCTCGCCCTaGGCTCCAGGGATCCCTGGT +
Preference number: 3 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTANPSSP*APGIPG
Trigger: ACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATT...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTTCGCCTGCTTCCCCTTaGAGTCCTGCTGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSSPASP*SPAGPG
Trigger: GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGA...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR GCA 72 bp GGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTaGACAGCCCACCTAGAGAGCCATTTTTGGCCAGAG +
Preference number: 3 (lower is better)
Translates to: GQLGTSPELCFA*TAHLESHFWPE
Trigger: CTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR GCA 72 bp CCCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTaGTTTGCCTGCACAGCCCACCTAGAGAGCCATTTT +
Preference number: 3 (lower is better)
Translates to: PCSGQLGTSPEL*FACTAHLESHF
Trigger: AAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp TCCGGGGGCCAAGTCTTGTCCAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SGGQVLSNCRGS*LWLSLEADEAR
Trigger: CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp TGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCTaGGCCCCTCCATCCTCGACACTCTGCTCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: WKQRQEVAVSPG*APPSSTLCSLE
Trigger: CTCCAGGGAGCAGAGTGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTaGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: RMELVAGNTCWR*KSLSSERGWVW
Trigger: CCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACA +
Preference number: 3 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGRDSRV*RGQVLT
Trigger: TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCT...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCTGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTTCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLSGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: MELVAGNTCWRWKSLSSESAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCCAGGATGGAGCTGGTaGCTGGGAACACTTGCTGGA +
Preference number: 3 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPPGWSW*LGTLAG
Trigger: TCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGCTCCATCCAAGCCCTaGGGACCCTGGATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLAPSKP*GPWIPW
Trigger: CCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGCACCCTTCTCTCCCTTaGCTCCATCCAAGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAHPSLP*LHPSPW
Trigger: CCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTG...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGGTTGCTGGGAACACTaGCTGGAGGTGGAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAGCWEH*LEVEKP
Trigger: AGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACC...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCCCTGAACTTCCTCCTTaGGTTTCTGGGATGGCTCTT +
Preference number: 3 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAPELPP*VSGMAL
Trigger: AAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAGG...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 3 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp CTGGCCTGTCCACTTTCCGGCAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGCATACTCTTGAATGTT +
Preference number: 3 (lower is better)
Translates to: LACPLSGSFTCR*LWGWVGILLNV
Trigger: AACATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGTGGACAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp AGCAACAGCAGCCGCTGTTCCACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGC +
Preference number: 3 (lower is better)
Translates to: SNSSRCSTPGSS*IGCVPGTPEFC
Trigger: GCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGGCTGCTGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTaGGTGGGAGACTTGGGGCCAGTGAGACCCAGACTC +
Preference number: 3 (lower is better)
Translates to: TAHLESHFWPEF*VGDLGPVRPRL
Trigger: GAGTCTGGGTCTCACTGGCCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACA +
Preference number: 3 (lower is better)
Translates to: RPPECGRARPSWGISTHCRDSRV*RGQVLT
Trigger: TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCT...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTAATCCAAGCTCGCCCTaGGCTCCAGGGATCCCTGGT +
Preference number: 3 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLNPSSP*APGIPG
Trigger: ACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATT...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTCACCCTTCTCTCCCTTaGCTCCATCCAAGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLHPSLP*LHPSPW
Trigger: CCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTG...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCACATGCCGGTGGCTTaGGGGCTGGGTGGGCATACT +
Preference number: 3 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWHMPVA*GLGGHT
Trigger: AGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTAGCATCTTTCTAGCCTaGCCCGAGCCAGGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLSIFLA*PEPGAS
Trigger: AGAAGCACCTGGCTCGGGCAAGGCTAGAAAGATGCT...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGAGCATCTTTCTAGCCTaGCCCGAGCCAGGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: MELVAGNTCWRWKSLSSESIFLA*PEPGAS
Trigger: AGAAGCACCTGGCTCGGGCAAGGCTAGAAAGATGCT...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTTGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGTCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWSGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGGTTGCTGGGAACACTaGCTGGAGGTGGAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLGCWEH*LEVEKP
Trigger: AGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCATCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGG +
Preference number: 3 (lower is better)
Translates to: LWFITHSDLHLHGNGRQASPFSP*RPSAPG
Trigger: CCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGA...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp CTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAATGTTAAAAGGCCACAG +
Preference number: 3 (lower is better)
Translates to: LSGSFTCRWLWG*VGILLNVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTTGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 3 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTAGCATCTTTCTAGCCTaGCCCGAGCCAGGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLSIFLA*PEPGAS
Trigger: AGAAGCACCTGGCTCGGGCAAGGCTAGAAAGATGCT...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTTGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp TGTCCACTTTCCGGCAGCTTCACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTCTTGAATGTTAAAAGG +
Preference number: 3 (lower is better)
Translates to: CPLSGSFTCRWL*GWVGILLNVKR
Trigger: CCTTTTAACATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCTGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 3 (lower is better)
Translates to: RPPECGRARPSWGISTHCWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGGGTTGCTGGGAACACTaGCTGGAGGTGGAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: VPLWVIMETETGSSSQSRGCWEH*LEVEKP
Trigger: AGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACC...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR TCA 72 bp GCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGCATCTTTCTAGCCTTG +
Preference number: 3 (lower is better)
Translates to: AVPQLRVSLLIR*LKAQRSIFLAL
Trigger: CAAGGCTAGAAAGATGCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCATGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 3 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGATCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGSGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAATCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: TRTCGLLHTVISIYTEMESGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCCTGAACTTCCTCCTTaGGTTTCTGGGATGGCTCTT +
Preference number: 3 (lower is better)
Translates to: VPLWVIMETETGSSSQSRPELPP*VSGMAL
Trigger: AAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAGG...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CCA 72 bp AGTCCACAAGGACAGGCACACCCAGACACGCACTTGTaGTTTATTACACACAGTGATCTCCATCTACACGGA +
Preference number: 3 (lower is better)
Translates to: SPQGQAHPDTHL*FITHSDLHLHG
Trigger: TCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGATGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGGGTTGCTGGGAACACTaGCTGGAGGTGGAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQGCWEH*LEVEKP
Trigger: AGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACC...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCACCCAGACACGCACTaGTGGTTTATTACACACAGT +
Preference number: 3 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWHPDTH*WFITHS
Trigger: ACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAACTGCCCTTCTCTCCTTaGGTTCCTGGCAGCCCAATA +
Preference number: 3 (lower is better)
Translates to: TRTCGLLHTVISIYTEMELPFSP*VPGSPI
Trigger: TATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAG...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGTGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 3 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR-3UTR CAA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCATGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 3 (lower is better)
Translates to: LWFITHSDLHLHGNGRQAWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCCCGTCCAGGGGGCCCTaGGGGGCAGACACATTCGGA +
Preference number: 4 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPPSRGP*GADTFG
Trigger: TCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGG...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 25 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCTCCTTTGGGGCCCGCTaGGCCTTGTGCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPSFGAR*ALCSPG
Trigger: CCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAGGA...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCTCTTCTCCCAGGCTTaGCGCGCCGTCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHLFSQA*RAVQGA
Trigger: GGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAACCGTCCAGGGGGCCCTaGGGGGCAGACACATTCGGA +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQPSRGP*GADTFG
Trigger: TCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGG...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCCCACGGGACACGGCTaGTCCAGGCCTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLPTGHG*SRPGGP
Trigger: GGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 72 bp TGTAGGCTGTCAGACGCCGACTCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: CRLSDADSPFSP*RPSAPGRPDKP
Trigger: GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTCGGCGTCTGACAGCCTACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTCCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCTGCAGCTCCATCCGTaGCTCGGTGGCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLLQLHP*LGGQAP
Trigger: GGGAGCCTGGCCACCGAGGCACGGATGGAGCTGCAG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAACCCTGGGGGTCCCTTTaGGCCCATCTCGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQPWGSL*AHLAVL
Trigger: CAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGCCCTTGGGCCCTGGTaGTCCAGGCTGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQALGPW*SRLAWC
Trigger: ACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGC...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCCATCCGTGCCTCGGTaGCCAGGCTCCCCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHPSVPR*PGSPFG
Trigger: ACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAACCCGGCTCGCCCTTCTaGCCCTTCACTCCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQPGSPF*PFTPFR
Trigger: CCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGG...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCCCAGCCGCAAGTGCTaGGCGAGTCTTGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHPSRKC*ASLVRG
Trigger: CCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCGACCCAGACTCTGAGTaGGAGGCCTGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPDPDSE*EACLPG
Trigger: ACCAGGGAGGCAGGCCTCCCACTCAGAGTCTGGGTC...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCGTAGCCATCTCGTCCTaGTTGCCCTGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPVAISS*LPWRTR
Trigger: CCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTAC...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTCCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCGGATCTGTACAGGTGTaGGCTGGGCCTGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPGSVQV*AGPVGH
Trigger: GTGACCCACAGGCCCAGCTCACACCTGTACAGATCC...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCTCCCCGAGGCCCCATaGTCCCTGGCTCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHLPEAP*SLARPW
Trigger: CCAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCCCATCCTCGACACTCTaGTCCCTGGAGCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPPSSTL*SLELGP
Trigger: TGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGG...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCTTCCCCTTTCGGGCCTaGAAGTCCGGGCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPFPFRA*KSGLAI
Trigger: GATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAA...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCTCCCCCTTCGGTCCTaGGGCACCGTCCACACCGTT +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLLPLRS*GTVHTV
Trigger: AACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTCCAGGGATCCCTGGTaGCCCTGGGGGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHSRDPW*PWGPLW
Trigger: CCACAGGGGCCCCCAGGGCCACCAGGGATCCCTGGA...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCCCAATAAGGCCCGGTaGGCCAACTGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHPNKAR*ANWPRQ
Trigger: CTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 4 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPTCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGACCCAGACTCTGAGTaGGAGGCCTGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQDPDSE*EACLPG
Trigger: ACCAGGGAGGCAGGCCTCCCACTCAGAGTCTGGGTC...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTCGTGGGTGGGTCTGGTaGCAGGCCCCCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPRGWVW*QAPCSG
Trigger: GCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACG...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCGTGGGTGGGTCTGGTaGCAGGCCCCCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSRGWVW*QAPCSG
Trigger: GCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACG...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGGCTCCACTATGAGCTaGGCCAGGCTCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQGSTMS*ARLSCR
Trigger: CCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCC...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGAGACTTGGGGCCAGTaGGACCCAGACTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQETWGQ*DPDSEW
Trigger: CCACTCAGAGTCTGGGTCTCACTGGCCCCAAGTCTC...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCTCCCCGAGGCCCCATaGTCCCTGGCTCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PAQASWEPALSFALPAQPLPEAP*SLARPW
Trigger: CCAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTCTCCCCGAGGCCCCATaGTCCCTGGCTCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSLPEAP*SLARPW
Trigger: CCAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAG...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTGGTGGCAGGCCCCCTaGTCAGGCCAGCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHWWQAP*SGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCA...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACGCGAGAGGCGGAGGTTaGAGTGAGCCGAGATCGCGA +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHARGGG*SEPRSR
Trigger: TCGCGATCTCGGCTCACTGCAACCTCCGCCTCTCGC...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCCGTCCAGGGGGCCCTaGGGGGCAGACACATTCGGA +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHPSRGP*GADTFG
Trigger: TCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCCGTCCAGGGGGCCCTaGGGGGCAGACACATTCGGA +
Preference number: 4 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSPSRGP*GADTFG
Trigger: TCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGG...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGCTCCATCTTGTCCTTaGTCTCCCCGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQAPSCP*SPRGPK
Trigger: CTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGC...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTTCCTTTGGGGCCCGCTaGGCCTTGTGCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSSFGAR*ALCSPG
Trigger: CCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAGGA...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCGTCCGGGCTCTCCTTTaGGGCCCGCTGGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFVRALL*GPLGLV
Trigger: CACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGAC...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCCTGGTGGTCCAGGCTaGCTTGGTGTCCCATCGTCG +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLPGGPG*LGVPSS
Trigger: CGACGATGGGACACCAAGCCAGCCTGGACCACCAGG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTTCCCTGGCTCGCCCTTaGGCCCTGGTGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSSLARP*ALVVQA
Trigger: AGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGA...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTTCCAGGGATCCCTGGTaGCCCTGGGGGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGSRDPW*PWGPLW
Trigger: CCACAGGGGCCCCCAGGGCCACCAGGGATCCCTGGA...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCGGACCCTGGATTCCCTaGAGGCCCATCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFGPWIP*RPIGPG
Trigger: CCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCC...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQTCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 72 bp TGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: CSPGPAASAGRV*SGGQVLSNCRG
Trigger: GCCTCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACGAGACTTGGGGCCAGTaGGACCCAGACTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHETWGQ*DPDSEW
Trigger: CCACTCAGAGTCTGGGTCTCACTGGCCCCAAGTCTC...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCAAGCAGGCGCTCCAGGTaGGGCTCGGCCCAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASSRRSR*GSAQAS
Trigger: GGACGCCTGGGCCGAGCCGCACCTGGAGCGCCTGCT...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS-3UTR GCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCCTCCCCGAGGCCCCATaGTCCCTGGCTCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLALPEAP*SLARPW
Trigger: CCAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAG...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCCTGCAGCTCCATCCGTaGCTCGGTGGCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSLQLHP*LGGQAP
Trigger: GGGAGCCTGGCCACCGAGGCACGGATGGAGCTGCAG...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCTGCAGCTCCATCCGTaGCTCGGTGGCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PAQASWEPALSFALPAQPLQLHP*LGGQAP
Trigger: GGGAGCCTGGCCACCGAGGCACGGATGGAGCTGCAG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGGGCACCCCGGGGCCCTaGAGCTCCATCCGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQGTPGP*SSIRAS
Trigger: CGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGCC...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000390654.8
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCTGGCTCCCCGGGTCTaGCCTTCTCTCCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLLAPRV*PSLLWF
Trigger: GAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCCTGTGGGTCACTTATaGCAGCAGCCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHPVGHL*QQPGTG
Trigger: GCCTGTGCCTGGCTGCTGGCATAAGTGACCCACAGG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGGTCACCCCGGGGCCCTaGAGCTCCATCCGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRVTPGP*SSIRAS
Trigger: CGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGAC...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407622.3
CDS-3UTR CCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTTCCTTTGGGGCCCGCTaGGCCTTGTGCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGSFGAR*ALCSPG
Trigger: CCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAGGA...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCGTCCGGGCTCTCCTTTaGGGCCCGCTGGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSVRALL*GPLGLV
Trigger: CACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGAC...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCTCACCCTTGGGCCCTaGGGGTCCCTTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHLTLGP*GSLWAH
Trigger: ATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACGCCCTTGGGCCCTGGTaGTCCAGGCTGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHALGPW*SRLAWC
Trigger: ACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGC...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCTCCCCCTTCGGTCCTaGGGCACCGTCCACACCGTT +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHLPLRS*GTVHTV
Trigger: AACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCGGGGCCAGGGGGCCCTaGCTCCACTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSGARGP*LHYELS
Trigger: GCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCC...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCGGGGCCAGGGGGCCCTaGCTCCACTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PAQASWEPALSFALPAQPGARGP*LHYELS
Trigger: GCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCC...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAACTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQLSFGS*QPNKAR
Trigger: CCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAG...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCCTGCTCAGGCCAGCTaGGAACCAGCCCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLPAQAS*EPALSF
Trigger: AAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTGAGCGTGGGTGGGTCTaGTGGCAGGCCCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGERGWV*WQAPCS
Trigger: TGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTC...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCCCCCGCTGCCTGGATaGGGTCTCTGTACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHPPLPG*GLCTSP
Trigger: TGGGCTGGTACAGAGACCCCATCCAGGCAGCGGGGG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407622.3
CDS-3UTR CCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCCTCGCCCTTGAGGCCTaGGGCACCCTGCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSLALEA*GTLHSQ
Trigger: CTGGCTGTGCAGGGTGCCCCAGGCCTCAAGGGCGAG...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407622.3
CDS-3UTR TCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCACCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTGGCAGGCTGGCCTCCTaGGGCCTCCTGAATGTGGTA +
Preference number: 4 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSGRLAS*GLLNVV
Trigger: TACCACATTCAGGAGGCCTCAGGAGGCCAGCCTGCC...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACGGCAGGCTGGCCTCCTaGGGCCTCCTGAATGTGGTA +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHGRLAS*GLLNVV
Trigger: TACCACATTCAGGAGGCCTCAGGAGGCCAGCCTGCC...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTCTGCAGCTCCATCCGTaGCTCGGTGGCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAALQLHP*LGGQAP
Trigger: GGGAGCCTGGCCACCGAGGCACGGATGGAGCTGCAG...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGGCACCCCGGGGCCCTaGAGCTCCATCCGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAGTPGP*SSIRAS
Trigger: CGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGCC...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000390654.8
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTGGCACCCCGGGGCCCTaGAGCTCCATCCGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLGTPGP*SSIRAS
Trigger: CGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGCC...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000390654.8
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHSGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGTCCGGGCTCTCCTTTaGGGCCCGCTGGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAVRALL*GPLGLV
Trigger: CACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGAC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCCTGGTGGTCCAGGCTaGCTTGGTGTCCCATCGTCG +
Preference number: 4 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSPGGPG*LGVPSS
Trigger: CGACGATGGGACACCAAGCCAGCCTGGACCACCAGG...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGATCCCTGGCTCGCCCTTaGGCCCTGGTGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRSLARP*ALVVQA
Trigger: AGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGA...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTTTGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCCATCCGTGCCTCGGTaGCCAGGCTCCCCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: PLGPFSPSIPGAPGNPSSPSVPR*PGSPFG
Trigger: ACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGG...CGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAGCCCAGGCAGGCCGCTaGGGCCTCTCTCACCCGACG +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLAQAGR*GLSHPT
Trigger: CGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGC...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGCCCAGGCAGGCCGCTaGGGCCTCTCTCACCCGACG +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAAQAGR*GLSHPT
Trigger: CGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGC...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLLSFGS*QPNKAR
Trigger: CCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCCCGGCTCGCCCTTCTaGCCCTTCACTCCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: PAQASWEPALSFALPAQPPGSPF*PFTPFR
Trigger: CCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHSFTCR*LWGWVG
Trigger: GCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCT...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGACCCAGCCGCAAGTGCTaGGCGAGTCTTGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRPSRKC*ASLVRG
Trigger: CCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGG...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGCGTGGGTGGGTCTGGTaGCAGGCCCCCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQRGWVW*QAPCSG
Trigger: GCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACG...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCGTCAGAGCGTGGGTaGGTCTGGTGGCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAASSERG*VWWQAP
Trigger: GGGGGCCTGCCACCAGACCCACCCACGCTCTGACGA...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTCCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGPLVRA*VGLVAG
Trigger: GCCTGCCACCAGACCCACCCACGCTCTGACGAGAGG...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTGCCCTGGCTCCACTATaGGCTGAGCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSALAPL*AEPGSP
Trigger: AGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGC...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACAAAGCTCCCACAAGGTaGGGGACCCACGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHKAPTR*GTHAGC
Trigger: GCAACCTGCGTGGGTCCCTCACCTTGTGGGAGCTTT...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680268.1
CDS-3UTR GCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCTCTTCTCCCAGGCTTaGCGCGCCGTCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPLFSQA*RAVQGA
Trigger: GGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGGGCACCCCGGGGCCCTaGAGCTCCATCCGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTGTPGP*SSIRAS
Trigger: CGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGCC...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390654.8
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCGGCACCCCGGGGCCCTaGAGCTCCATCCGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCGTPGP*SSIRAS
Trigger: CGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGCC...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000390654.8
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTACCACTGTGTCTCCCTaGTCGCCCTTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGTTVSP*SPLRPG
Trigger: CCCAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGT...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTCCTGTGGGTCACTTATaGCAGCAGCCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPPVGHL*QQPGTG
Trigger: GCCTGTGCCTGGCTGCTGGCATAAGTGACCCACAGG...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCGGGCCCAGCCGCAAGTaGTGGGCGAGTCTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGGPSRK*WASLVR
Trigger: CCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCC...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACGAGCTTTGCTTTGCCTaGACAGCCCACCTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHELCFA*TAHLES
Trigger: GCTCTCTAGGTGGGCTGTGCAGGCAAAGCAAAGCTC...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCATGGTGGCAGGCCCCCTaGTCAGGCCAGCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASWWQAP*SGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCA...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGAGGCCTGGGGCACCCTaGACAGCCAGGCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTRPGAP*TARRGL
Trigger: GAGCCCCCGCCTGGCTGTGCAGGGTGCCCCAGGCCT...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407622.3
CDS-3UTR GCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCGCGAGAGGCGGAGGTTaGAGTGAGCCGAGATCGCGA +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSARGGG*SEPRSR
Trigger: TCGCGATCTCGGCTCACTGCAACCTCCGCCTCTCGC...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCGCGTTCGTCGCGCGTaGACTCTCCGAGGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVRVRRA*TLRGGG
Trigger: ACCGCCCCCTCGGAGAGTCCACGCGCGACGAACGCG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCACCGGCGCGCTCGCCTaGGCCCATGGCGCGTTCGTC +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCTGALA*AHGAFV
Trigger: GACGAACGCGCCATGGGCCCAGGCGAGCGCGCCGGT...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS-3UTR CCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCGCTCCATCTTGTCCTTaGTCTCCCCGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFAPSCP*SPRGPK
Trigger: CTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGC...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCAGTCCGGGCTCTCCTTTaGGGCCCGCTGGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASVRALL*GPLGLV
Trigger: CACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGAC...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTTGGTCCAGGCTGGCTTaGTGTCCCATCGTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPWSRLA*CPIVAL
Trigger: AAGGGCGACGATGGGACACCAAGCCAGCCTGGACCA...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAGCCCTTGGGCCCTGGTaGTCCAGGCTGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRALGPW*SRLAWC
Trigger: ACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGC...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTCCCTGGCTCGCCCTTaGGCCCTGGTGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQSLARP*ALVVQA
Trigger: AGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGA...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACATCCAGGGATCCCTGGTaGCCCTGGGGGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTSRDPW*PWGPLW
Trigger: CCACAGGGGCCCCCAGGGCCACCAGGGATCCCTGGA...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTTCCAGGGATCCCTGGTaGCCCTGGGGGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLSRDPW*PWGPLW
Trigger: CCACAGGGGCCCCCAGGGCCACCAGGGATCCCTGGA...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGGGGGCCAGGGGGCCCTaGCTCCACTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQGARGP*LHYELS
Trigger: GCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCC...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGGCCCAGGCAGGCCGCTaGGGCCTCTCTCACCCGACG +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTAQAGR*GLSHPT
Trigger: CGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGC...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGACCCAATAAGGCCCGGTaGGCCAACTGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRPNKAR*ANWPRQ
Trigger: CTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGG...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACGGCTGGTCCAGGCCTaGTGGTCCCGGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPRLVQA*WSRLAL
Trigger: AAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCG...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTGGAGGCCTGCCTCCCTaGTCCAGGCCATGTCCTATC +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGGGLPP*SRPCPI
Trigger: GATAGGACATGGCCTGGACCAGGGAGGCAGGCCTCC...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCAGAGCGTGGGTGGGTCTaGTGGCAGGCCCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASERGWV*WQAPCS
Trigger: TGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTC...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGACCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRPLVRA*VGLVAG
Trigger: GCCTGCCACCAGACCCACCCACGCTCTGACGAGAGG...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCGGTCAAAGTGTGTCTaGAGTTGGTTCCTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHRSKCV*SWFLPV
Trigger: CACCGGCAGGAACCAACTCCAGACACACTTTGACCG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR TCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSEPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGGCAGGCTGGCCTCCTaGGGCCTCCTGAATGTGGTA +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAGRLAS*GLLNVV
Trigger: TACCACATTCAGGAGGCCTCAGGAGGCCAGCCTGCC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCGCTGGGAACCAGCCCTaGGCTTTGCTTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSAGNQP*ALLCLH
Trigger: GTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGC...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCAGCCTCTGGGAGCATaGGGAGACAGAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGQPLGA*GDRAEA
Trigger: GGCCTCGGCTCTGTCTCCTCATGCTCCCAGAGGCTG...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407622.3
CDS-3UTR TCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCGGCCCTGTCTGCCTCTaGCTGGAACAGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PRHSAPWSWVHITAITELGPVCL*LEQPRT
Trigger: GGTCCTGGGCTGTTCCAGTCAGAGGCAGACAGGGCC...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680268.1
CDS-3UTR TCA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACAGCTGCTTGGGAGACTaGGGCTGGAGAACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHSCLGD*GWRTAL
Trigger: TAAAGCAGTTCTCCAGCCTCAGTCTCCCAAGCAGCT...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGCTCTTCTCCCAGGCTTaGCGCGCCGTCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARLFSQA*RAVQGA
Trigger: GGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAG...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCTCTTCTCCCAGGCTTaGCGCGCCGTCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGLFSQA*RAVQGA
Trigger: GGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGACTCCCCGAGGCCCCATaGTCCCTGGCTCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRLPEAP*SLARPW
Trigger: CCAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAG...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACACTGCAGCTCCATCCGTaGCTCGGTGGCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTLQLHP*LGGQAP
Trigger: GGGAGCCTGGCCACCGAGGCACGGATGGAGCTGCAG...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTCTGGCTCCCCGGGTCTaGCCTTCTCTCCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGLAPRV*PSLLWF
Trigger: GAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAG...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTCCTGTGGGTCACTTATaGCAGCAGCCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSPVGHL*QQPGTG
Trigger: GCCTGTGCCTGGCTGCTGGCATAAGTGACCCACAGG...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAAAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTGGGCCCAGCCGCAAGTaGTGGGCGAGTCTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLGPSRK*WASLVR
Trigger: CCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCC...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCTGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PAQASWEPALSFALPAQPWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCACCAGCCCTGAGCTTTaGTTTGCCTGCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFTSPEL*FACTAH
Trigger: GTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGT...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCAGGGGGCGGTGCTGCTaGGGCAGAGGCTGGGTGCGA +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCRGRCC*GRGWVR
Trigger: TCGCACCCAGCCTCTGCCCCAGCAGCACCGCCCCCT...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS-3UTR CCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTGCTCCATCTTGTCCTTaGTCTCCCCGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGAPSCP*SPRGPK
Trigger: CTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGC...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTTCCTTTGGGGCCCGCTaGGCCTTGTGCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPSFGAR*ALCSPG
Trigger: CCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAGGA...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCCCTGGGGGTCCCTTTaGGCCCATCTCGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGPWGSL*AHLAVL
Trigger: CAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTATCCCTGGCTCGCCCTTaGGCCCTGGTGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLSLARP*ALVVQA
Trigger: AGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGA...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTCCATCCGTGCCTCGGTaGCCAGGCTCCCCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLPSVPR*PGSPFG
Trigger: ACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGG...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCCATCCGTGCCTCGGTaGCCAGGCTCCCCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPPSVPR*PGSPFG
Trigger: ACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCCTCTCCATCGATTCCTaGGGCACCGGGCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFLSIDS*GTGQSK
Trigger: CTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAG...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTGGACCCTGGATTCCCTaGAGGCCCATCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLGPWIP*RPIGPG
Trigger: CCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCC...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGGGACCCTGGATTCCCTaGAGGCCCATCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAGPWIP*RPIGPG
Trigger: CCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCC...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCAAGCCCTTGGGACCCTaGATTCCCTGGAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSKPLGP*IPWRPI
Trigger: GATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTT...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCCCTAAGCCCTTGGGACCCTaGATTCCCTGGAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: WGPSLHRFLGHRAIQARPKPLGP*IPWRPI
Trigger: GATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTT...AGGGCGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSLSFGS*QPNKAR
Trigger: CCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAG...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCCCCGGCTCGCCCTTCTaGCCCTTCACTCCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: PRHSAPWSWVHITAITELPGSPF*PFTPFR
Trigger: CCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGG...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCGGCTGGTCCAGGCCTaGTGGTCCCGGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGRLVQA*WSRLAL
Trigger: AAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCCCACGGGACACGGCTaGTCCAGGCCTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTPTGHG*SRPGGP
Trigger: GGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRSFTCR*LWGWVG
Trigger: GCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCT...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTTTGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PLGPFSPSIPGAPGNPSSSFTCR*LWGWVG
Trigger: GCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCT...CGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLRYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQNCRGS*LWLSLE
Trigger: CTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTT...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTCCCAGCCGCAAGTGCTaGGCGAGTCTTGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLPSRKC*ASLVRG
Trigger: CCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGG...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGCAGTCAGTCCAGGCTaGGCCCCTCCATCCTCGACA +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAAVSPG*APPSST
Trigger: TGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCGTGGGTGGGTCTGGTaGCAGGCCCCCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGRGWVW*QAPCSG
Trigger: GCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGAGCGTGGGTGGGTCTaGTGGCAGGCCCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPERGWV*WQAPCS
Trigger: TGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTC...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGCGTGGGTGGGTCTaGTGGCAGGCCCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAERGWV*WQAPCS
Trigger: TGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTC...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTGAGCGTGGGTGGGTCTaGTGGCAGGCCCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLERGWV*WQAPCS
Trigger: TGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTC...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGTCGTCAGAGCGTGGGTaGGTCTGGTGGCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVSSERG*VWWQAP
Trigger: GGGGGCCTGCCACCAGACCCACCCACGCTCTGACGA...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACATCGTCAGAGCGTGGGTaGGTCTGGTGGCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTSSERG*VWWQAP
Trigger: GGGGGCCTGCCACCAGACCCACCCACGCTCTGACGA...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAATCCTCCTTTGGTTTCTaGGATGGCTCTTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQSSFGF*DGSYSG
Trigger: CCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGA...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGGTCCGGGAGGCCCCTTaGGGGCATCCAAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAVREAP*GHPRSC
Trigger: GCAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGAC...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTGAGACTTGGGGCCAGTaGGACCCAGACTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAAETWGQ*DPDSEW
Trigger: CCACTCAGAGTCTGGGTCTCACTGGCCCCAAGTCTC...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTAGGCGGAGGTTGCAGTaGGCCGAGATCGCGACACCG +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTARRRLQ*AEIATP
Trigger: CGGTGTCGCGATCTCGGCTCACTGCAACCTCCGCCT...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCTGGAAGTCCGGGCTTaGCATCCAAACCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRLEVRA*HPNPGV
Trigger: GACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAG...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGACCACTGTGTCTCCCTaGTCGCCCTTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQTTVSP*SPLRPG
Trigger: CCCAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGT...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQSGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCCCTACCAGCCCTGAGCTTTaGTTTGCCTGCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: WGPSLHRFLGHRAIQARPTSPEL*FACTAH
Trigger: GTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGT...AGGGCGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGTGGTGGCAGGCCCCCTaGTCAGGCCAGCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGWWQAP*SGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCA...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGATGGTGGCAGGCCCCCTaGTCAGGCCAGCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRWWQAP*SGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCA...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCTGGTGGCAGGCCCCCTaGTCAGGCCAGCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCWWQAP*SGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCA...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGTGCAGCGCGGCCGCCTaGACACCCAGCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSECSAAA*TPSSRQ
Trigger: CTGCCTGCTGCTGGGTGTCCAGGCGGCCGCGCTGCA...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGGTCCGGGCTCTCCTTTaGGGCCCGCTGGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGVRALL*GPLGLV
Trigger: CACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGAC...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCCCTGGGGGTCCCTTTaGGCCCATCTCGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVPWGSL*AHLAVL
Trigger: CAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACACCCTGGGGGTCCCTTTaGGCCCATCTCGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTPWGSL*AHLAVL
Trigger: CAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGCTCACCCTTGGGCCCTaGGGGTCCCTTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRALTLGP*GSLWAH
Trigger: ATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAG...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTCTCACCCTTGGGCCCTaGGGGTCCCTTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLLTLGP*GSLWAH
Trigger: ATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAG...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTCACCCTTGGGCCCTaGGGGTCCCTTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPLTLGP*GSLWAH
Trigger: ATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAG...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGGCCCTTGGGCCCTGGTaGTCCAGGCTGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAALGPW*SRLAWC
Trigger: ACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGC...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGCTCCCCCTTCGGTCCTaGGGCACCGTCCACACCGTT +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRALPLRS*GTVHTV
Trigger: AACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAG...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGCCATCCGTGCCTCGGTaGCCAGGCTCCCCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARPSVPR*PGSPFG
Trigger: ACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGG...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCTCTCCATCGATTCCTaGGGCACCGGGCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: PAQASWEPALSFALPAQPLSIDS*GTGQSK
Trigger: CTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGGGACCCTGGATTCCCTaGAGGCCCATCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARGPWIP*RPIGPG
Trigger: CCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCC...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGCCCAATAAGGCCCGGTaGGCCAACTGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAPNKAR*ANWPRQ
Trigger: CTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGG...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSLSFGS*QPNKAR
Trigger: CCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAG...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTCCCGGCTCGCCCTTCTaGCCCTTCACTCCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLPGSPF*PFTPFR
Trigger: CCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGG...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGGCTGGTCCAGGCCTaGTGGTCCCGGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSERLVQA*WSRLAL
Trigger: AAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCG...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRTCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCCCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLRGSWL*LSLEAD
Trigger: ATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCT...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCCCAGCCGCAAGTGCTaGGCGAGTCTTGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTPSRKC*ASLVRG
Trigger: CCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCTCAGCCACTACTCCTaGCCAGAGGACATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHLSHYS*PEDMCS
Trigger: AGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCCGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSRHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTCCTGCTCAGGCCAGCTaGGAACCAGCCCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAAPAQAS*EPALSF
Trigger: AAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCACGTGGGTGGGTCTGGTaGCAGGCCCCCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSRGWVW*QAPCSG
Trigger: GCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACG...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCGAGCGTGGGTGGGTCTaGTGGCAGGCCCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCERGWV*WQAPCS
Trigger: TGAGCAGGGGGCCTGCCACCAGACCCACCCACGCTC...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCGGCTCCACTATGAGCTaGGCCAGGCTCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGGSTMS*ARLSCR
Trigger: CCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCC...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGGGATCTGTACAGGTGTaGGCTGGGCCTGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQGSVQV*AGPVGH
Trigger: GTGACCCACAGGCCCAGCTCACACCTGTACAGATCC...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGGGCAGGCTGGCCTCCTaGGGCCTCCTGAATGTGGTA +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAGRLAS*GLLNVV
Trigger: TACCACATTCAGGAGGCCTCAGGAGGCCAGCCTGCC...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGAGGCGGAGGTTGCAGTaGGCCGAGATCGCGACACCG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARRRRLQ*AEIATP
Trigger: CGGTGTCGCGATCTCGGCTCACTGCAACCTCCGCCT...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACAGCTGCTTGGGAGACTaGGGCTGGAGAACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHSCLGD*GWRTAL
Trigger: TAAAGCAGTTCTCCAGCCTCAGTCTCCCAAGCAGCT...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTACCACTGTGTCTCCCTaGTCGCCCTTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTATTVSP*SPLRPG
Trigger: CCCAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGT...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAAGCCCATCTCGCCTaGTTCCCCTTTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRQAHLA*FPFESC
Trigger: GCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTG...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTCAAGCCCATCTCGCCTaGTTCCCCTTTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAAQAHLA*FPFESC
Trigger: GCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTG...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCCAAGCCCATCTCGCCTaGTTCCCCTTTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAQAHLA*FPFESC
Trigger: GCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTG...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCCTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTGGGCCCAGCCGCAAGTaGTGGGCGAGTCTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSGPSRK*WASLVR
Trigger: CCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCC...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCACCAGCCCTGAGCTTTaGTTTGCCTGCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLATSPEL*FACTAH
Trigger: GTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGT...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGATGGTGGCAGGCCCCCTaGTCAGGCCAGCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: FACTAHLESHFWPEFWVGWWQAP*SGQLGT
Trigger: GGTTCCCAGCTGGCCTGAGCAGGGGGCCTGCCACCA...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGGCTCGCCTGGGCCCATaGCGCGTTCGTCGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMARLGP*RVRRAW
Trigger: CCACGCGCGACGAACGCGCCATGGGCCCAGGCGAGC...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS-3UTR CCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGCAGACACATTCGGATaGAGCTTCCCGAGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAADTFG*SFPSSP
Trigger: CGGACTGCTCGGGAAGCTCCATCCGAATGTGTCTGC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTTCCCCTTTCGGGCCTaGAAGTCCGGGCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQFPFRA*KSGLAI
Trigger: GATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAA...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCAGCTCCATCTTGTCCTTaGTCTCCCCGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASAPSCP*SPRGPK
Trigger: CTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGC...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGTCCTTTGGGGCCCGCTaGGCCTTGTGCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSESFGAR*ALCSPG
Trigger: CCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAGGA...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCCCCTGGGGGTCCCTTTaGGCCCATCTCGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCPWGSL*AHLAVL
Trigger: CAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCATCCCTGGCTCGCCCTTaGGCCCTGGTGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSSLARP*ALVVQA
Trigger: AGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGA...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGTCCCTGGCTCGCCCTTaGGCCCTGGTGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSESLARP*ALVVQA
Trigger: AGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGA...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCTCCCCCTTCGGTCCTaGGGCACCGTCCACACCGTT +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTLPLRS*GTVHTV
Trigger: AACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTCCATCCGTGCCTCGGTaGCCAGGCTCCCCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSPSVPR*PGSPFG
Trigger: ACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGG...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGGCCAGGGGGCCCTaGCTCCACTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTGARGP*LHYELS
Trigger: GCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCC...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGACCCTGGATTCCCTaGAGGCCCATCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTGPWIP*RPIGPG
Trigger: CCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCC...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCTCCATCCAAGCCCTTaGGACCCTGGATTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRLHPSP*DPGFPG
Trigger: TCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAG...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGGCCCAGGCAGGCCGCTaGGGCCTCTCTCACCCGACG +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRAQAGR*GLSHPT
Trigger: CGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGC...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTTTGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PLGPFSPSIPGAPGNPSSLSFGS*QPNKAR
Trigger: CCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAG...CGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTCGGCTGGTCCAGGCCTaGTGGTCCCGGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLRLVQA*WSRLAL
Trigger: AAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCG...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGTGTGAGCTGGGCCTGTaGGTCACTTATGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRCELGL*VTYASS
Trigger: GCTGCTGGCATAAGTGACCCACAGGCCCAGCTCACA...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTTGTACAGGTGTGAGCTaGGCCTGTGGGTCACTTATG +
Preference number: 4 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSCTGVS*ACGSLM
Trigger: CATAAGTGACCCACAGGCCCAGCTCACACCTGTACA...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQTCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCCCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCCCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGACCCAGCCGCAAGTGCTaGGCGAGTCTTGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: FACTAHLESHFWPEFWVGPSRKC*ASLVRG
Trigger: CCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGG...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGC +
Preference number: 4 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSRARPS*GISTHC
Trigger: GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCT...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTGCAGTCAGTCCAGGCTaGGCCCCTCCATCCTCGACA +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLAVSPG*APPSST
Trigger: TGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGC...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGCAGTCAGTCCAGGCTaGGCCCCTCCATCCTCGACA +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAAVSPG*APPSST
Trigger: TGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGC...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGCAGTCAGTCCAGGCTaGGCCCCTCCATCCTCGACA +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPAVSPG*APPSST
Trigger: TGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGC...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGGAGGCCTGCCTCCCTaGTCCAGGCCATGTCCTATC +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSGGLPP*SRPCPI
Trigger: GATAGGACATGGCCTGGACCAGGGAGGCAGGCCTCC...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGGGAGGCCTGCCTCCCTaGTCCAGGCCATGTCCTATC +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAGGLPP*SRPCPI
Trigger: GATAGGACATGGCCTGGACCAGGGAGGCAGGCCTCC...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAGACCCAGACTCTGAGTaGGAGGCCTGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPDPDSE*EACLPG
Trigger: ACCAGGGAGGCAGGCCTCCCACTCAGAGTCTGGGTC...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACCTGCTCAGGCCAGCTaGGAACCAGCCCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASPAQAS*EPALSF
Trigger: AAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACATCGTCAGAGCGTGGGTaGGTCTGGTGGCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTSSERG*VWWQAP
Trigger: GGGGGCCTGCCACCAGACCCACCCACGCTCTGACGA...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTPLVRA*VGLVAG
Trigger: GCCTGCCACCAGACCCACCCACGCTCTGACGAGAGG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTGATGGAGCTGGTTGCTaGGAACACTTGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGDGAGC*EHLLEV
Trigger: CACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATC...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCACAAACCCAGGGGTCCTaGAGGACCAGGGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSQTQGS*RTRVAS
Trigger: AGAGGCGACCCTGGTCCTCCAGGACCCCTGGGTTTG...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407622.3
ENST00000679896.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACTGTCTGCCTCTGACTaGAACAGCCCAGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASLSASD*NSPGPG
Trigger: TCCCGGTCCTGGGCTGTTCCAGTCAGAGGCAGACAG...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680268.1
CDS-3UTR CCA 90 bp TGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCCCTAAGTGTGTCTGGAGTTaGTTCCTGCCGGTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: WGPSLHRFLGHRAIQARPKCVWS*FLPVGS
Trigger: CGAACCCACCGGCAGGAACCAACTCCAGACACACTT...AGGGCGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGGTAGCCATCTCGTCCTaGTTGCCCTGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAVAISS*LPWRTR
Trigger: CCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTAC...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390654.8
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAGGCTCCACTATGAGCTaGGCCAGGCTCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPGSTMS*ARLSCR
Trigger: CCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCC...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAGGCTCCACTATGAGCTaGGCCAGGCTCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLGSTMS*ARLSCR
Trigger: CCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCC...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGCCCTGGCTCCACTATaGGCTGAGCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRALAPL*AEPGSP
Trigger: AGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGC...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAGGATCTGTACAGGTGTaGGCTGGGCCTGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLGSVQV*AGPVGH
Trigger: GTGACCCACAGGCCCAGCTCACACCTGTACAGATCC...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAGGATCTGTACAGGTGTaGGCTGGGCCTGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPGSVQV*AGPVGH
Trigger: GTGACCCACAGGCCCAGCTCACACCTGTACAGATCC...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGATCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 4 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRSLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAASLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTGCTGGGAACCAGCCCTaGGCTTTGCTTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLAGNQP*ALLCLH
Trigger: GTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGC...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTCTGGAAGTCCGGGCTTaGCATCCAAACCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTALEVRA*HPNPGV
Trigger: GACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAG...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGACCACTGTGTCTCCCTaGTCGCCCTTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGTTVSP*SPLRPG
Trigger: CCCAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGT...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGACCACTGTGTCTCCCTaGTCGCCCTTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARTTVSP*SPLRPG
Trigger: CCCAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGT...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTGGCTCCCCGGGTCTaGCCTTCTCTCCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLLAPRV*PSLLWF
Trigger: GAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAG...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTCTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: FACTAHLESHFWPEFWVGGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGGGATTTCCACTCACTaGTCCCCGGGCCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLGISTH*SPGPAA
Trigger: TGCGGCTGGGCCCGGGGAGCAGTGAGTGGAAATCCC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACATGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTATGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTCCATCCTCGACACTCTaGTCCCTGGAGCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLPSSTL*SLELGP
Trigger: TGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGG...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCCATCCTCGACACTCTaGTCCCTGGAGCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVPSSTL*SLELGP
Trigger: TGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGCCATCCTCGACACTCTaGTCCCTGGAGCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAPSSTL*SLELGP
Trigger: TGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGG...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCGTTGCTGGGAACACTTaGTGGAGGTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PAQASWEPALSFALPAQPVAGNT*WRWKSL
Trigger: GAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAAC...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTTCCCCTTTCGGGCCTaGAAGTCCGGGCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAFPFRA*KSGLAI
Trigger: GATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAA...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTATTCCCCTTTCGGGCCTaGAAGTCCGGGCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLFPFRA*KSGLAI
Trigger: GATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAA...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGGCTCCATCTTGTCCTTaGTCTCCCCGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAAPSCP*SPRGPK
Trigger: CTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGC...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGCTCCATCTTGTCCTTaGTCTCCCCGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAAPSCP*SPRGPK
Trigger: CTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGC...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTTCCTTTGGGGCCCGCTaGGCCTTGTGCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLSFGAR*ALCSPG
Trigger: CCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAGGA...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTCCCTGGGGGTCCCTTTaGGCCCATCTCGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSPWGSL*AHLAVL
Trigger: CAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCATGGTCCAGGCTGGCTTaGTGTCCCATCGTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPWSRLA*CPIVAL
Trigger: AAGGGCGACGATGGGACACCAAGCCAGCCTGGACCA...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGTCCAGGCTGGCTTaGTGTCCCATCGTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAWSRLA*CPIVAL
Trigger: AAGGGCGACGATGGGACACCAAGCCAGCCTGGACCA...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGTGGTCCAGGCTGGCTTaGTGTCCCATCGTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVWSRLA*CPIVAL
Trigger: AAGGGCGACGATGGGACACCAAGCCAGCCTGGACCA...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGCCTGGTGGTCCAGGCTaGCTTGGTGTCCCATCGTCG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARPGGPG*LGVPSS
Trigger: CGACGATGGGACACCAAGCCAGCCTGGACCACCAGG...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGCCCTTGGGCCCTGGTaGTCCAGGCTGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSALGPW*SRLAWC
Trigger: ACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGC...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGACTCCCCCTTCGGTCCTaGGGCACCGTCCACACCGTT +
Preference number: 4 (lower is better)
Translates to: FACTAHLESHFWPEFWVGLPLRS*GTVHTV
Trigger: AACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAG...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGTCCAGGGATCCCTGGTaGCCCTGGGGGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRSRDPW*PWGPLW
Trigger: CCACAGGGGCCCCCAGGGCCACCAGGGATCCCTGGA...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCCTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: PAQASWEPALSFALPAQPLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGAAGCCCTTGGGACCCTaGATTCCCTGGAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVKPLGP*IPWRPI
Trigger: GATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTT...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCACCCAATAAGGCCCGGTaGGCCAACTGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSPNKAR*ANWPRQ
Trigger: CTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGG...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGACCCGGCTCGCCCTTCTaGCCCTTCACTCCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: FACTAHLESHFWPEFWVGPGSPF*PFTPFR
Trigger: CCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGG...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTCCCGGCTCGCCCTTCTaGCCCTTCACTCCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLPGSPF*PFTPFR
Trigger: CCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGG...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCGGCTGGTCCAGGCCTaGTGGTCCCGGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRRLVQA*WSRLAL
Trigger: AAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCG...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGCCCACGGGACACGGCTaGTCCAGGCCTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMPTGHG*SRPGGP
Trigger: GGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGG...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTTTGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PLGPFSPSIPGAPGNPSSRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...CGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 4 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTTCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCCACATCTCCCTGGTCTaGCCTGTCCACTTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: PRHSAPWSWVHITAITELHISLV*PVHFPA
Trigger: TGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTG...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: PAQASWEPALSFALPAQPRYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCAACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCCCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: PRHSAPWSWVHITAITELPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGC +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRRARPS*GISTHC
Trigger: GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCT...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCTCTGCTCCCTGGAGCTaGGTCCACATCACAGCGATC +
Preference number: 4 (lower is better)
Translates to: PRHSAPWSWVHITAITELSAPWS*VHITAI
Trigger: GATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGA...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCACGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASRHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCGGAGGCCTGCCTCCCTaGTCCAGGCCATGTCCTATC +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCGGLPP*SRPCPI
Trigger: GATAGGACATGGCCTGGACCAGGGAGGCAGGCCTCC...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGGAGGCCTGCCTCCCTaGTCCAGGCCATGTCCTATC +
Preference number: 4 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRGGLPP*SRPCPI
Trigger: GATAGGACATGGCCTGGACCAGGGAGGCAGGCCTCC...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACTTTCCGGCAGCTTCACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTTCCTGCTCAGGCCAGCTaGGAACCAGCCCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TFRQLHMPVALGLGGHTLPAQAS*EPALSF
Trigger: AAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG...AAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTAACACTTGCTGGAGGTaGAAAAGCCTCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSNTCWR*KSLSSE
Trigger: CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTT...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGATGGAGCTGGTTGCTaGGAACACTTGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLADGAGC*EHLLEV
Trigger: CACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTTTGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCAGCCAGGATGGAGCTaGTTGCTGGGAACACTTGCT +
Preference number: 4 (lower is better)
Translates to: PLGPFSPSIPGAPGNPSSQPGWS*LLGTLA
Trigger: AGCAAGTGTTCCCAGCAACCAGCTCCATCCTGGCTG...CGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAACCCGGGGAATCCGCTaGGGCTTTCAGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTTRGIR*GFQQGL
Trigger: CAGGCCCTGCTGAAAGCCCCAGCGGATTCCCCGGGT...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407622.3
ENST00000680889.1
CDS-3UTR CCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGACAAACCCAGGGGTCCTaGAGGACCAGGGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRQTQGS*RTRVAS
Trigger: AGAGGCGACCCTGGTCCTCCAGGACCCCTGGGTTTG...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407622.3
ENST00000679896.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCTTTGGTTTCTGGGATaGCTCTTACTCAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHLWFLG*LLLREG
Trigger: ACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTTCCTCCTTTGGTTTCTaGGATGGCTCTTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPSSFGF*DGSYSG
Trigger: CCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGA...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 72 bp GCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: ASAGRVLSGGQV*SNCRGSWLWLS
Trigger: ACTCAACCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGGTAGCCATCTCGTCCTaGTTGCCCTGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARVAISS*LPWRTR
Trigger: CCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTAC...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390654.8
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTAGCCATCTCGTCCTaGTTGCCCTGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRVAISS*LPWRTR
Trigger: CCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTAC...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000390654.8
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGGGCTCCACTATGAGCTaGGCCAGGCTCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGGSTMS*ARLSCR
Trigger: CCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCC...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGGCCCTGGCTCCACTATaGGCTGAGCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSEALAPL*AEPGSP
Trigger: AGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGC...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGCCCTGGCTCCACTATaGGCTGAGCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTALAPL*AEPGSP
Trigger: AGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGC...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCGGATCTGTACAGGTGTaGGCTGGGCCTGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCGSVQV*AGPVGH
Trigger: GTGACCCACAGGCCCAGCTCACACCTGTACAGATCC...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTGCAGATCCTTCCTGGTaGGTGTTACAGCTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPADPSW*VLQLLK
Trigger: CTTTAAGAGCTGTAACACTCACCAGGAAGGATCTGC...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680268.1
CDS-3UTR GCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCTGGAAGTCCGGGCTTaGCATCCAAACCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTLEVRA*HPNPGV
Trigger: GACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAACCACTGTGTCTCCCTaGTCGCCCTTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTTTVSP*SPLRPG
Trigger: CCCAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGT...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCACAAGCCCATCTCGCCTaGTTCCCCTTTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSQAHLA*FPFESC
Trigger: GCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTG...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCTGGCTCCCCGGGTCTaGCCTTCTCTCCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGLAPRV*PSLLWF
Trigger: GAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCCCTGTGGGTCACTTATaGCAGCAGCCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCPVGHL*QQPGTG
Trigger: GCCTGTGCCTGGCTGCTGGCATAAGTGACCCACAGG...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLSGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTCAAGTCTTGTCCAACTaGAGAGGCAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAAQVLSN*RGSWLW
Trigger: CCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTG...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGGGGCCCAGCCGCAAGTaGTGGGCGAGTCTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRGPSRK*WASLVR
Trigger: CCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCC...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCAGAGCTTTGCTTTGCCTaGACAGCCCACCTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASELCFA*TAHLES
Trigger: GCTCTCTAGGTGGGCTGTGCAGGCAAAGCAAAGCTC...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCGAGCTTTGCTTTGCCTaGACAGCCCACCTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PRHSAPWSWVHITAITELELCFA*TAHLES
Trigger: GCTCTCTAGGTGGGCTGTGCAGGCAAAGCAAAGCTC...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGTTGCTGGGAACACTTaGTGGAGGTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAVAGNT*WRWKSL
Trigger: GAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAAC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGTTCCCCTTTCGGGCCTaGAAGTCCGGGCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGFPFRA*KSGLAI
Trigger: GATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAA...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTCTCACCCTTGGGCCCTaGGGGTCCCTTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLLTLGP*GSLWAH
Trigger: ATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAG...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTCTCCATCGATTCCTaGGGCACCGGGCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPLSIDS*GTGQSK
Trigger: CTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAG...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCTCTCCATCGATTCCTaGGGCACCGGGCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPLSIDS*GTGQSK
Trigger: CTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCTTTGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: PLGPFSPSIPGAPGNPSSLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...CGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGGGGGCCAGGGGGCCCTaGCTCCACTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMGARGP*LHYELS
Trigger: GCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCC...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCTCCATCCAAGCCCTTaGGACCCTGGATTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVLHPSP*DPGFPG
Trigger: TCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCGGCTGGTCCAGGCCTaGTGGTCCCGGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWRLVQA*WSRLAL
Trigger: AAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCCCACGGGACACGGCTaGTCCAGGCCTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWPTGHG*SRPGGP
Trigger: GGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCATGTGAGCTGGGCCTGTaGGTCACTTATGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSCELGL*VTYASS
Trigger: GCTGCTGGCATAAGTGACCCACAGGCCCAGCTCACA...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTATGTGAGCTGGGCCTGTaGGTCACTTATGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLCELGL*VTYASS
Trigger: GCTGCTGGCATAAGTGACCCACAGGCCCAGCTCACA...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGTGTACAGGTGTGAGCTaGGCCTGTGGGTCACTTATG +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRCTGVS*ACGSLM
Trigger: CATAAGTGACCCACAGGCCCAGCTCACACCTGTACA...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCACATCTCCCTGGTCTaGCCTGTCCACTTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVHISLV*PVHFPA
Trigger: TGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGAAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRRYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACACGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 4 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTRHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGGAGGCCTGCCTCCCTaGTCCAGGCCATGTCCTATC +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLGGLPP*SRPCPI
Trigger: GATAGGACATGGCCTGGACCAGGGAGGCAGGCCTCC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGGACCCAGACTCTGAGTaGGAGGCCTGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSEDPDSE*EACLPG
Trigger: ACCAGGGAGGCAGGCCTCCCACTCAGAGTCTGGGTC...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCGTGGGTGGGTCTGGTaGCAGGCCCCCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWRGWVW*QAPCSG
Trigger: GCCTGAGCAGGGGGCCTGCCACCAGACCCACCCACG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGTCGTCAGAGCGTGGGTaGGTCTGGTGGCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LVQAMSYLVPLWVIMETESSERG*VWWQAP
Trigger: GGGGGCCTGCCACCAGACCCACCCACGCTCTGACGA...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCCCTCCATCTACACGGAAATaGAAGGCAAGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WGPSLHRFLGHRAIQARPPSTRK*KASSQD
Trigger: ATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGG...AGGGCGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGGATCTGTACAGGTGTaGGCTGGGCCTGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLGSVQV*AGPVGH
Trigger: GTGACCCACAGGCCCAGCTCACACCTGTACAGATCC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTATCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLSLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAACAAGGAGATTTATTGTaGAGAGCAAAAGAACAAAGC +
Preference number: 4 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQQGDLL*RAKEQS
Trigger: GCTTTGTTCTTTTGCTCTTCACAATAAATCTCCTTG...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680268.1
CDS-3UTR GCA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGGGGCATCCAAGATCCTaGCATCATAGTCGATCACCA +
Preference number: 4 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRGHPRS*HHSRSP
Trigger: TGGTGATCGACTATGATGGCAGGATCTTGGATGCCC...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACACCTGTGGGTCACTTATaGCAGCAGCCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTPVGHL*QQPGTG
Trigger: GCCTGTGCCTGGCTGCTGGCATAAGTGACCCACAGG...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTCCTGTGGGTCACTTATaGCAGCAGCCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLPVGHL*QQPGTG
Trigger: GCCTGTGCCTGGCTGCTGGCATAAGTGACCCACAGG...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCCAAGTCTTGTCCAACTaGAGAGGCAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PRHSAPWSWVHITAITELQVLSN*RGSWLW
Trigger: CCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTG...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGAGCTTTGCTTTGCCTaGACAGCCCACCTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSELCFA*TAHLES
Trigger: GCTCTCTAGGTGGGCTGTGCAGGCAAAGCAAAGCTC...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGACCAGCCCTGAGCTTTaGTTTGCCTGCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTTSPEL*FACTAH
Trigger: GTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGT...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCCGTCCAGGGGGCCCTaGGGGGCAGACACATTCGGA +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWPSRGP*GADTFG
Trigger: TCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAAAGCCCTTGGGACCCTaGATTCCCTGGAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTKPLGP*IPWRPI
Trigger: GATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTT...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGCCCAATAAGGCCCGGTaGGCCAACTGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMPNKAR*ANWPRQ
Trigger: CTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGG...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGCCCAATAAGGCCCGGTaGGCCAACTGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEPNKAR*ANWPRQ
Trigger: CTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGG...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARLSFGS*QPNKAR
Trigger: CCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAG...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGTGTGAGCTGGGCCTGTaGGTCACTTATGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTCELGL*VTYASS
Trigger: GCTGCTGGCATAAGTGACCCACAGGCCCAGCTCACA...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCATGTACAGGTGTGAGCTaGGCCTGTGGGTCACTTATG +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASCTGVS*ACGSLM
Trigger: CATAAGTGACCCACAGGCCCAGCTCACACCTGTACA...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRARWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGACCCCTGGGTCTTCTTaGATAGGGTGTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARTPGSS*IGCVPG
Trigger: CCCTGGGACACACCCTATCCAAGAAGACCCAGGGGT...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGC +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRARARPS*GISTHC
Trigger: GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCT...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTCTCAGCCACTACTCCTaGCCAGAGGACATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTALSHYS*PEDMCS
Trigger: AGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAG...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGCGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARRHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGTCGTCAGAGCGTGGGTaGGTCTGGTGGCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWSSERG*VWWQAP
Trigger: GGGGGCCTGCCACCAGACCCACCCACGCTCTGACGA...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRPLVRA*VGLVAG
Trigger: GCCTGCCACCAGACCCACCCACGCTCTGACGAGAGG...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCCTCCTTTGGTTTCTaGGATGGCTCTTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAASSFGF*DGSYSG
Trigger: CCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGA...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCTGAACTTCCTCCTTTaGTTTCTGGGATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHLNFLL*FLGWLL
Trigger: TAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCCCCTTCTCCCCCTTaGGGCCGTCAGCGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQPPSPP*GRQRPG
Trigger: TCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGG...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGTCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARSLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRSGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACAAGTCTTGTCCAACTaGAGAGGCAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPQVLSN*RGSWLW
Trigger: CCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTG...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGGAGCTTTGCTTTGCCTaGACAGCCCACCTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGELCFA*TAHLES
Trigger: GCTCTCTAGGTGGGCTGTGCAGGCAAAGCAAAGCTC...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGACCAGCCCTGAGCTTTaGTTTGCCTGCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSETSPEL*FACTAH
Trigger: GTGGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGT...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGTTGCTGGGAACACTTaGTGGAGGTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPVAGNT*WRWKSL
Trigger: GAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAAC...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGCAGACACATTCGGATaGAGCTTCCCGAGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLADTFG*SFPSSP
Trigger: CGGACTGCTCGGGAAGCTCCATCCGAATGTGTCTGC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGCAGACACATTCGGATaGAGCTTCCCGAGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSADTFG*SFPSSP
Trigger: CGGACTGCTCGGGAAGCTCCATCCGAATGTGTCTGC...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGCCTGGTGGTCCAGGCTaGCTTGGTGTCCCATCGTCG +
Preference number: 4 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMPGGPG*LGVPSS
Trigger: CGACGATGGGACACCAAGCCAGCCTGGACCACCAGG...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTCTCTCCATCGATTCCTaGGGCACCGGGCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLLSIDS*GTGQSK
Trigger: CTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAG...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCTCCATCCAAGCCCTTaGGACCCTGGATTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSELHPSP*DPGFPG
Trigger: TCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAG...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGGCCCAGGCAGGCCGCTaGGGCCTCTCTCACCCGACG +
Preference number: 4 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQAQAGR*GLSHPT
Trigger: CGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGC...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPRYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTCCTTCATCTCCTTCCTaGGAAAGCCCAGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSPSSPS*ESPGPR
Trigger: CCTTGGGCCTGGGCTTTCCCAGGAAGGAGATGAAGG...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTTCTGCTCCCTGGAGCTaGGTCCACATCACAGCGATC +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLSAPWS*VHITAI
Trigger: GATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGA...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCATCTGCTCCCTGGAGCTaGGTCCACATCACAGCGATC +
Preference number: 4 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSSAPWS*VHITAI
Trigger: GATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGA...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSERHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCAAACACTTGCTGGAGGTaGAAAAGCCTCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASNTCWR*KSLSSE
Trigger: CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTT...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGAACACTTGCTGGAGGTaGAAAAGCCTCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQNTCWR*KSLSSE
Trigger: CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTT...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCCAGCCAGGATGGAGCTaGTTGCTGGGAACACTTGCT +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCQPGWS*LLGTLA
Trigger: AGCAAGTGTTCCCAGCAACCAGCTCCATCCTGGCTG...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGACCCGGGGAATCCGCTaGGGCTTTCAGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWTRGIR*GFQQGL
Trigger: CAGGCCCTGCTGAAAGCCCCAGCGGATTCCCCGGGT...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407622.3
ENST00000680889.1
CDS-3UTR CCA 90 bp GCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTTCATCCTCCTTTGGTTTCTaGGATGGCTCTTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: APQVHISLVWPVHFPAASSSFGF*DGSYSG
Trigger: CCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGA...TGAAGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCCTGAACTTCCTCCTTTaGTTTCTGGGATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSLNFLL*FLGWLL
Trigger: TAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 72 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGC +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRV*RGQVLTGQYHS
Trigger: GCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCTGGAAGTCCGGGCTTaGCATCCAAACCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRLEVRA*HPNPGV
Trigger: GACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAG...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGCTGGAAGTCCGGGCTTaGCATCCAAACCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMLEVRA*HPNPGV
Trigger: GACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAG...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCTCCCCGAGGCCCCATaGTCCCTGGCTCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQLPEAP*SLARPW
Trigger: CCAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAG...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTGGGCATCCAAGATCCTaGCATCATAGTCGATCACCA +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPGHPRS*HHSRSP
Trigger: TGGTGATCGACTATGATGGCAGGATCTTGGATGCCC...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGGGCATCCAAGATCCTaGCATCATAGTCGATCACCA +
Preference number: 4 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTGHPRS*HHSRSP
Trigger: TGGTGATCGACTATGATGGCAGGATCTTGGATGCCC...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGGGCATCCAAGATCCTaGCATCATAGTCGATCACCA +
Preference number: 4 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAGHPRS*HHSRSP
Trigger: TGGTGATCGACTATGATGGCAGGATCTTGGATGCCC...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCTGGCTCCCCGGGTCTaGCCTTCTCTCCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRLAPRV*PSLLWF
Trigger: GAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAG...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGACTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGCTTGCCCGAGCCAGGTaGTTCTACCTTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGLARAR*FYLHLL
Trigger: AAGGAGATGAAGGTAGAAGCACCTGGCTCGGGCAAG...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGCCATCCTCGACACTCTaGTCCCTGGAGCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEPSSTL*SLELGP
Trigger: TGGACCCAGCTCCAGGGAGCAGAGTGTCGAGGATGG...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTGAGCTTTGCTTTGCCTaGACAGCCCACCTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLELCFA*TAHLES
Trigger: GCTCTCTAGGTGGGCTGTGCAGGCAAAGCAAAGCTC...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGGTTGCTGGGAACACTTaGTGGAGGTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGVAGNT*WRWKSL
Trigger: GAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAAC...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTGCAGACACATTCGGATaGAGCTTCCCGAGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLADTFG*SFPSSP
Trigger: CGGACTGCTCGGGAAGCTCCATCCGAATGTGTCTGC...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGTTCCCCTTTCGGGCCTaGAAGTCCGGGCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEFPFRA*KSGLAI
Trigger: GATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAA...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCCTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCCACGGGACACGGCTaGTCCAGGCCTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQPTGHG*SRPGGP
Trigger: GGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGG...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGTGTACAGGTGTGAGCTaGGCCTGTGGGTCACTTATG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARCTGVS*ACGSLM
Trigger: CATAAGTGACCCACAGGCCCAGCTCACACCTGTACA...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGACGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: FACTAHLESHFWPEFWVGRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAAGGTACACATCTCCCTaGTCTGGCCTGTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: GLQSFAGAGSYRAVPQLRRYTSP*SGLSTF
Trigger: GAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCT...TCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLRGSWL*LSLEAD
Trigger: ATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCT...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLNCRGS*LWLSLE
Trigger: CTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTT...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVNCRGS*LWLSLE
Trigger: CTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTT...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTCTCAGCCACTACTCCTaGCCAGAGGACATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLLSHYS*PEDMCS
Trigger: AGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAG...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCTCAGCCACTACTCCTaGCCAGAGGACATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSELSHYS*PEDMCS
Trigger: AGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAG...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAAACACTTGCTGGAGGTaGAAAAGCCTCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPNTCWR*KSLSSE
Trigger: CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTT...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGAACACTTGCTGGAGGTaGAAAAGCCTCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVNTCWR*KSLSSE
Trigger: CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTT...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGATGGAGCTGGTTGCTaGGAACACTTGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FACTAHLESHFWPEFWVGDGAGC*EHLLEV
Trigger: CACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATC...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCCATCTACACGGAAATaGAAGGCAAGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVPSTRK*KASSQD
Trigger: ATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGCTTTGGTTTCTGGGATaGCTCTTACTCAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRALWFLG*LLLREG
Trigger: ACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAG...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGGGGTGGGCATACTCTTaGATGTTAAAAGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARGWAYS*MLKGHR
Trigger: CCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCC...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGGAGACTTGGGGCCAGTaGGACCCAGACTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWETWGQ*DPDSEW
Trigger: CCACTCAGAGTCTGGGTCTCACTGGCCCCAAGTCTC...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGGGGCATCCAAGATCCTaGCATCATAGTCGATCACCA +
Preference number: 4 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGGHPRS*HHSRSP
Trigger: TGGTGATCGACTATGATGGCAGGATCTTGGATGCCC...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGTGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGTTGCTGGGAACACTTaGTGGAGGTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: FACTAHLESHFWPEFWVGVAGNT*WRWKSL
Trigger: GAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAAC...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGGCAGACACATTCGGATaGAGCTTCCCGAGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRADTFG*SFPSSP
Trigger: CGGACTGCTCGGGAAGCTCCATCCGAATGTGTCTGC...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACACTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAACCCACGGGACACGGCTaGTCCAGGCCTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEPTGHG*SRPGGP
Trigger: GGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGG...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACATGTACAGGTGTGAGCTaGGCCTGTGGGTCACTTATG +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTCTGVS*ACGSLM
Trigger: CATAAGTGACCCACAGGCCCAGCTCACACCTGTACA...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCATGTACAGGTGTGAGCTaGGCCTGTGGGTCACTTATG +
Preference number: 4 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSCTGVS*ACGSLM
Trigger: CATAAGTGACCCACAGGCCCAGCTCACACCTGTACA...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGCCGCTGTTCCACCCCTaGGTCTTCTTGGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMPLFHP*VFLDRV
Trigger: CACCCTATCCAAGAAGACCCAGGGGTGGAACAGCGG...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGC +
Preference number: 4 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLRARPS*GISTHC
Trigger: GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCT...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGCGACACTCTGCTCCCTaGAGCTGGGTCCACATCACA +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRRHSAP*SWVHIT
Trigger: TGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCG...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCCTTTGGTTTCTGGGATaGCTCTTACTCAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCLWFLG*LLLREG
Trigger: ACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAG...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGTCCTCCTTTGGTTTCTaGGATGGCTCTTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: SNCRGSWLWLSLEADEARSSFGF*DGSYSG
Trigger: CCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGA...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 72 bp ACATGCCGGTGGCTTTGGGGCTGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAGGTAGCGCATTCCATG +
Preference number: 4 (lower is better)
Translates to: TCRWLWGWVGIL*NVKRPQVAHSM
Trigger: CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCTGTTTATTACACACAGTaGTCTCCATCTACACGGAAA +
Preference number: 4 (lower is better)
Translates to: GAPQVHISLVWPVHFPAAVYYTQ*SPSTRK
Trigger: TTTCCGTGTAGATGGAGATCACTGTGTGTAATAAAC...AGCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGTTTATTACACACAGTaGTCTCCATCTACACGGAAA +
Preference number: 4 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAVYYTQ*SPSTRK
Trigger: TTTCCGTGTAGATGGAGATCACTGTGTGTAATAAAC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCACTGCAGCTCCATCCGTaGCTCGGTGGCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LWFITHSDLHLHGNGRQALQLHP*LGGQAP
Trigger: GGGAGCCTGGCCACCGAGGCACGGATGGAGCTGCAG...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGTCCGGGCTCTCCTTTaGGGCCCGCTGGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEVRALL*GPLGLV
Trigger: CACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGAC...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTCTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGGGGGCCAGGGGGCCCTaGCTCCACTATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLGARGP*LHYELS
Trigger: GCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCC...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCTCCATCCAAGCCCTTaGGACCCTGGATTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWLHPSP*DPGFPG
Trigger: TCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCACATCTCCCTGGTCTaGCCTGTCCACTTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWHISLV*PVHFPA
Trigger: TGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSERGSWL*LSLEAD
Trigger: ATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCT...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSRGSWL*LSLEAD
Trigger: ATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCT...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAAACTGCAGAGGCAGCTaGTTGTGGTTGAGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTNCRGS*LWLSLE
Trigger: CTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTT...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGAGAGCTAGACCCTCGTaGGGGATTTCCACTCACTGC +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRRARPS*GISTHC
Trigger: GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCT...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGTCTGCTCCCTGGAGCTaGGTCCACATCACAGCGATC +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWSAPWS*VHITAI
Trigger: GATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGA...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGGATGGAGCTGGTTGCTaGGAACACTTGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEDGAGC*EHLLEV
Trigger: CACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATC...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGCAGCCAGGATGGAGCTaGTTGCTGGGAACACTTGCT +
Preference number: 4 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMQPGWS*LLGTLA
Trigger: AGCAAGTGTTCCCAGCAACCAGCTCCATCCTGGCTG...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGAAGTGTGTCTGGAGTTaGTTCCTGCCGGTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMKCVWS*FLPVGS
Trigger: CGAACCCACCGGCAGGAACCAACTCCAGACACACTT...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAGCCCTGGCTCCACTATaGGCTGAGCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGALAPL*AEPGSP
Trigger: AGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGC...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 4 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGCAAGTCTTGTCCAACTaGAGAGGCAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEQVLSN*RGSWLW
Trigger: CCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTG...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAACTCACCCTTGGGCCCTaGGGGTCCCTTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMELTLGP*GSLWAH
Trigger: ATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAG...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGACCTGGTGGTCCAGGCTaGCTTGGTGTCCCATCGTCG +
Preference number: 4 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGPGGPG*LGVPSS
Trigger: CGACGATGGGACACCAAGCCAGCCTGGACCACCAGG...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAACTCCCCCTTCGGTCCTaGGGCACCGTCCACACCGTT +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMELPLRS*GTVHTV
Trigger: AACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAG...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAGCAGTCAGTCCAGGCTaGGCCCCTCCATCCTCGACA +
Preference number: 4 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGAVSPG*APPSST
Trigger: TGTCGAGGATGGAGGGGCCCAGCCTGGACTGACTGC...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGCCTCTCGTCAGAGCGTaGGTGGGTCTGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLPLVRA*VGLVAG
Trigger: GCCTGCCACCAGACCCACCCACGCTCTGACGAGAGG...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCCAGACACGCACTTGTaGTTTATTACACACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPPDTHL*FITHSD
Trigger: ATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCACCAGACACGCACTTGTaGTTTATTACACACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSPDTHL*FITHSD
Trigger: ATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGG...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGCCAGACACGCACTTGTaGTTTATTACACACAGTGAT +
Preference number: 4 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVPDTHL*FITHSD
Trigger: ATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGG...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp AGGCCTCCTGAATGTGGTAGAGCTAGACCCTCGTGGGGGATTTCCACTCACTGCCTGAACTTCCTCCTTTaGTTTCTGGGATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: RPPECGRARPSWGISTHCLNFLL*FLGWLL
Trigger: TAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG...GCAGTGAGTGGAAATCCCCCACGAGGGTCTAGCTCTACCACATTCAGGAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGCCCTGGCTCCACTATaGGCTGAGCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEALAPL*AEPGSP
Trigger: AGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGC...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGGCTGGGAACCAGCCCTaGGCTTTGCTTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQAGNQP*ALLCLH
Trigger: GTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGC...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGTTTATTACACACAGTaGTCTCCATCTACACGGAAA +
Preference number: 4 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSVYYTQ*SPSTRK
Trigger: TTTCCGTGTAGATGGAGATCACTGTGTGTAATAAAC...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCATCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LWFITHSDLHLHGNGRQASGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGTCCGGCAGCTTCACATaGCGGTGGCTTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLSGSFT*RWLWGW
Trigger: CCAGCCCCAAAGCCACCGGCATGTGAAGCTGCCGGA...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCCAGGCCCAAGGGTaGCCCTCAGGTACACATCTC +
Preference number: 4 (lower is better)
Translates to: LWFITHSDLHLHGNGRQAAQAQG*PSGTHL
Trigger: GAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGGC...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGATGGTCCAGGCTGGCTTaGTGTCCCATCGTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGWSRLA*CPIVAL
Trigger: AAGGGCGACGATGGGACACCAAGCCAGCCTGGACCA...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCACCTGGTGGTCCAGGCTaGCTTGGTGTCCCATCGTCG +
Preference number: 4 (lower is better)
Translates to: LWFITHSDLHLHGNGRQAPGGPG*LGVPSS
Trigger: CGACGATGGGACACCAAGCCAGCCTGGACCACCAGG...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAATCCAAGCTCGCCCTTaGCTCCAGGGATCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGIQARP*LQGSLV
Trigger: CACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAAGCCCTTGGGACCCTaGATTCCCTGGAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGKPLGP*IPWRPI
Trigger: GATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTT...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAAGCTTCACATGCCGGTaGCTTTGGGGCTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LWFITHSDLHLHGNGRQASFTCR*LWGWVG
Trigger: GCCCACCCAGCCCCAAAGCCACCGGCATGTGAAGCT...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGAGAGGCAGCTGGTTGTaGTTGAGTTTGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRRGSWL*LSLEAD
Trigger: ATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCT...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGACCCAGACTCTGAGTaGGAGGCCTGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LWFITHSDLHLHGNGRQADPDSE*EACLPG
Trigger: ACCAGGGAGGCAGGCCTCCCACTCAGAGTCTGGGTC...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCTGCTCAGGCCAGCTaGGAACCAGCCCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQPAQAS*EPALSF
Trigger: AAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGCCATCTACACGGAAATaGAAGGCAAGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEPSTRK*KASSQD
Trigger: ATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGG...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
3UTR CAA 72 bp GGCAGTCCACAAGGACAGGCACACCCAGACACGCACTaGTGGTTTATTACACACAGTGATCTCCATCTACAC +
Preference number: 4 (lower is better)
Translates to: GSPQGQAHPDTH*WFITHSDLHLH
Trigger: GTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGGGCTCCACTATGAGCTaGGCCAGGCTCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLGSTMS*ARLSCR
Trigger: CCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCC...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGAGACTTGGGGCCAGTaGGACCCAGACTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LWFITHSDLHLHGNGRQAETWGQ*DPDSEW
Trigger: CCACTCAGAGTCTGGGTCTCACTGGCCCCAAGTCTC...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGCTGGGAACCAGCCCTaGGCTTTGCTTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEAGNQP*ALLCLH
Trigger: GTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGC...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGGTTTATTACACACAGTaGTCTCCATCTACACGGAAA +
Preference number: 4 (lower is better)
Translates to: GSTTAESLSADQVTEGPTVYYTQ*SPSTRK
Trigger: TTTCCGTGTAGATGGAGATCACTGTGTGTAATAAAC...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGTGGCCAGAGGACATGTaGTCTCATGGCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLWPEDM*SHGRLA
Trigger: GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCA...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAATGGTCCAGGCTGGCTTaGTGTCCCATCGTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEWSRLA*CPIVAL
Trigger: AAGGGCGACGATGGGACACCAAGCCAGCCTGGACCA...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAACATGCCGGTGGCTTTaGGGCTGGGTGGGCATACTC +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMETCRWL*GWVGIL
Trigger: GAGTATGCCCACCCAGCCCCAAAGCCACCGGCATGT...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGATCTGCTCCCTGGAGCTaGGTCCACATCACAGCGATC +
Preference number: 4 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGSAPWS*VHITAI
Trigger: GATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGA...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCCAGACACGCACTTGTaGTTTATTACACACAGTGAT +
Preference number: 4 (lower is better)
Translates to: MELVAGNTCWRWKSLSSEPDTHL*FITHSD
Trigger: ATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGG...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTCTGAACTTCCTCCTTTaGTTTCTGGGATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLLNFLL*FLGWLL
Trigger: TAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGATCTCTGCTGATCAGGTaGCTGAAGGCCCAACGTAGC +
Preference number: 4 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGSLLIR*LKAQRS
Trigger: GCTACGTTGGGCCTTCAGTCACCTGATCAGCAGAGA...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGCAAGCCCATCTCGCCTaGTTCCCCTTTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLQAHLA*FPFESC
Trigger: GCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTG...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGCAGACACATTCGGATaGAGCTTCCCGAGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEADTFG*SFPSSP
Trigger: CGGACTGCTCGGGAAGCTCCATCCGAATGTGTCTGC...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGCTCCATCCAAGCCCTTaGGACCCTGGATTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLLHPSP*DPGFPG
Trigger: TCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAG...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAACACATCTCCCTGGTCTaGCCTGTCCACTTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEHISLV*PVHFPA
Trigger: TGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTG...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCAGCCAGGATGGAGCTaGTTGCTGGGAACACTTGCT +
Preference number: 4 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQQPGWS*LLGTLA
Trigger: AGCAAGTGTTCCCAGCAACCAGCTCCATCCTGGCTG...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGGTTGCTGGGAACACTTaGTGGAGGTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQVAGNT*WRWKSL
Trigger: GAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAAC...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGCGGTGGCTTTGGGGCTaGGTGGGCATACTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLRWLWG*VGILLN
Trigger: ATTCAAGAGTATGCCCACCCAGCCCCAAAGCCACCG...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGATGGAGCTGGTTGCTaGGAACACTTGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEDGAGC*EHLLEV
Trigger: CACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATC...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGGTTTATTACACACAGTaGTCTCCATCTACACGGAAA +
Preference number: 4 (lower is better)
Translates to: VPLWVIMETETGSSSQSRVYYTQ*SPSTRK
Trigger: TTTCCGTGTAGATGGAGATCACTGTGTGTAATAAAC...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR GCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGCAAGTCTTGTCCAACTaGAGAGGCAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLQVLSN*RGSWLW
Trigger: CCACAACCAGCTGCCTCTGCAGTTGGACAAGACTTG...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGCTCCTTTCTGTCCTTTaGGGCCCTTCTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLLLSVL*GPSLHR
Trigger: TCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAG...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCCAGACACGCACTTGTaGTTTATTACACACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWPDTHL*FITHSD
Trigger: ATCACTGTGTGTAATAAACCACAAGTGCGTGTCTGG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGCCATCTACACGGAAATaGAAGGCAAGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLPSTRK*KASSQD
Trigger: ATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGG...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CCA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAACCATCTACACGGAAATaGAAGGCAAGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEPSTRK*KASSQD
Trigger: ATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGG...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR TCA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGTTTATTACACACAGTaGTCTCCATCTACACGGAAA +
Preference number: 4 (lower is better)
Translates to: LWFITHSDLHLHGNGRQAVYYTQ*SPSTRK
Trigger: TTTCCGTGTAGATGGAGATCACTGTGTGTAATAAAC...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS CCA 90 bp CGCATTGCCCTTCCCCGCGTCGCCGCCGCCACCGGCGCGCTCGCCTaGGCCCATGGCGCGTTCGTCGCGCGTGGACTCTCCGAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: RIALPRVAAATGALA*AHGAFVARGLSEGA
Trigger: CGCCCCCTCGGAGAGTCCACGCGCGACGAACGCGCCATGGGCCCAGGCGAGCGCGCCGGTGGCGGCGGCGACGCGGGGAAGGGCAATGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS GCA 90 bp CCCATGGCGCGTTCGTCGCGCGTGGACTCTCCGAGGGGGCGGTGCTaGTGGGGCAGAGGCTGGGTGCGAGAGGAGCAGGCGGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: PMARSSRVDSPRGRC*WGRGWVREEQAGQP
Trigger: GGGCTGTCCCGCCTGCTCCTCTCGCACCCAGCCTCTGCCCCAGCAGCACCGCCCCCTCGGAGAGTCCACGCGCGACGAACGCGCCATGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS GCA 90 bp GGGCCCATGGCGCGTTCGTCGCGCGTGGACTCTCCGAGGGGGCGGTaGTGCTGGGGCAGAGGCTGGGTGCGAGAGGAGCAGGCGGGACAG +
Preference number: 5 (lower is better)
Translates to: GPMARSSRVDSPRGR*CWGRGWVREEQAGQ
Trigger: CTGTCCCGCCTGCTCCTCTCGCACCCAGCCTCTGCCCCAGCAGCACCGCCCCCTCGGAGAGTCCACGCGCGACGAACGCGCCATGGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS CCA 90 bp TCGCGCGTGGACTCTCCGAGGGGGCGGTGCTGCTGGGGCAGAGGCTaGGTGCGAGAGGAGCAGGCGGGACAGCCCGAGGCACGAGGTCCG +
Preference number: 5 (lower is better)
Translates to: SRVDSPRGRCCWGRG*VREEQAGQPEARGP
Trigger: CGGACCTCGTGCCTCGGGCTGTCCCGCCTGCTCCTCTCGCACCCAGCCTCTGCCCCAGCAGCACCGCCCCCTCGGAGAGTCCACGCGCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS-3UTR CAA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCCTCCCTGGCTCGCCCTaGGGCCCTGGTGGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPLPGSP*GPGGPG
Trigger: GCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAG...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLSPFSP*RPSAPG
Trigger: CCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGA...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CACTGCTCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: HCSPGPAASAGRVLSGGQGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...TTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGAGCAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGGTGGTCCAGGCTGGCTaGGTGTCCCATCGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLVVQAG*VSHRRP
Trigger: AGGGCGACGATGGGACACCAAGCCAGCCTGGACCAC...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCCTCCCTGGCTCGCCCTaGGGCCCTGGTGGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSLPGSP*GPGGPG
Trigger: GCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAG...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTTCTCCCTGCTCGCCCTaGAGGCCTGGGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSSPCSP*RPGAPR
Trigger: CCGGGGTGCCCCAGGCCTCAAGGGCGAGCAGGGAGA...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTGCCCTGGGGGTCCCTTaGGGCCCATCTCGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPALGVP*GPSRRL
Trigger: AAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGC...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCTCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLASPFSP*RPSAPG
Trigger: CCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGA...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACGCTCCATCCAAGCCCTaGGGACCCTGGATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHAPSKP*GPWIPW
Trigger: CCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGC...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACCACATGCCGGTGGCTTaGGGGCTGGGTGGGCATACT +
Preference number: 5 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHHMPVA*GLGGHT
Trigger: AGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTG...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGTCACTTATGCCAGCAGCCAGGCACAGGCAGCCCGTCGGGGCCCACGGGACACAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: GHLCQQPGTGSPSGPTGHSAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...GTGTCCCGTGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAGTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCCCAGCAGCTCCATCTaGTCCTTGGTCTCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSPSSSI*SLVSPG
Trigger: CCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGG...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCGTGGTCCAGGCTGGCTaGGTGTCCCATCGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFVVQAG*VSHRRP
Trigger: AGGGCGACGATGGGACACCAAGCCAGCCTGGACCAC...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGAATCCAAGCTCGCCCTaGGCTCCAGGGATCCCTGGT +
Preference number: 5 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLNPSSP*APGIPG
Trigger: ACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATT...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCGCCTGCTTCCCCTTaGAGTCCTGCTGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFSPASP*SPAGPG
Trigger: GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGA...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTCCCAGCAGCTCCATCTaGTCCTTGGTCTCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGPSSSI*SLVSPG
Trigger: CCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGG...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTGCCCATCTCGCCGTCTaGTCCGGGCTCTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSAHLAV*SGLSFG
Trigger: CCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGC...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCCTGGCTCGCCCTaGGGCCCTGGTGGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLLPGSP*GPGGPG
Trigger: GCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAG...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCATCTCCCTGCTCGCCCTaGAGGCCTGGGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPSPCSP*RPGAPR
Trigger: CCGGGGTGCCCCAGGCCTCAAGGGCGAGCAGGGAGA...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390654.8
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCATCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSSPFSP*RPSAPG
Trigger: CCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGA...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTGCTCCATCCAAGCCCTaGGGACCCTGGATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: RPSGPSLLSGRGPLVLPSAPSKP*GPWIPW
Trigger: CCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGC...AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGCCAGGATGGAGCTGGTaGCTGGGAACACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLPGWSW*LGTLAG
Trigger: TCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGG...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACAGCTCCATCTTGTCCTaGGTCTCCCCGGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHSSILS*VSPGAK
Trigger: TTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCT...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGCCCATCTCGCCGTCTaGTCCGGGCTCTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAAHLAV*SGLSFG
Trigger: CCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCTCCCTGGCTCGCCCTaGGGCCCTGGTGGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GSTTAESLSADQVTEGPTLPGSP*GPGGPG
Trigger: GCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: ELSHYSWPEDMCSHGRLAGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...GGCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCAATCCAAGCTCGCCCTaGGCTCCAGGGATCCCTGGT +
Preference number: 5 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFNPSSP*APGIPG
Trigger: ACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATT...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCGCTCCATCCAAGCCCTaGGGACCCTGGATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PAQASWEPALSFALPAQPAPSKP*GPWIPW
Trigger: CCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGC...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGAGCATCTTTCTAGCCTaGCCCGAGCCAGGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLSIFLA*PEPGAS
Trigger: AGAAGCACCTGGCTCGGGCAAGGCTAGAAAGATGCT...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCCCCGGGCCCAGCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SPGPAASAGRVLSGGQVLCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGCTGGGCCCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSSAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GCCGCAAGTGCTGGGCGAGTCTTGTCCGGGGGCCAAGTCTTGTCCAACTGCAGACCTGGAAGTCCGGGCTaGCCATCCAAACCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: AASAGRVLSGGQVLSNCRPGSPG*PSKPRG
Trigger: ACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGG...TCTGCAGTTGGACAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACTTGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCAGCTCCATCTTGTCCTaGGTCTCCCCGGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSSSILS*VSPGAK
Trigger: TTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCT...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGTCCGGGCTCTCCTTaGGGGCCCGCTGGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRACPGSP*GPAGPC
Trigger: ACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACA...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCATGTCCGGGCTCTCCTTaGGGGCCCGCTGGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSCPGSP*GPAGPC
Trigger: ACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACA...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCGCCCATCTCGCCGTCTaGTCCGGGCTCTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGAHLAV*SGLSFG
Trigger: CCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGC...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGGCCCATCTCGCCGTCTaGTCCGGGCTCTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQAHLAV*SGLSFG
Trigger: CCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGC...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGCCCTGGGGGTCCCTTaGGGCCCATCTCGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: PGTPEFCGGRFLQGSTTAALGVP*GPSRRL
Trigger: AAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGC...AGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCCCTGGGGGTCCCTTaGGGCCCATCTCGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTALGVP*GPSRRL
Trigger: AAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGC...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAGCCCTGGGGGTCCCTTaGGGCCCATCTCGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPALGVP*GPSRRL
Trigger: AAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGC...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCATCTCCCTGCTCGCCCTaGAGGCCTGGGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSSPCSP*RPGAPR
Trigger: CCGGGGTGCCCCAGGCCTCAAGGGCGAGCAGGGAGA...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000390654.8
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGATCTCCCTGCTCGCCCTaGAGGCCTGGGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: FACTAHLESHFWPEFWVGSPCSP*RPGAPR
Trigger: CCGGGGTGCCCCAGGCCTCAAGGGCGAGCAGGGAGA...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000390654.8
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGTCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: MELVAGNTCWRWKSLSSESPFSP*RPSAPG
Trigger: CCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGA...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTTCCCCCTTCTCCCCCTaGAGGCCGTCAGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLSPFSP*RPSAPG
Trigger: CCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGA...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCACATGCCGGTGGCTTaGGGGCTGGGTGGGCATACT +
Preference number: 5 (lower is better)
Translates to: PRVPLRYTSPWSGLSTFRHMPVA*GLGGHT
Trigger: AGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTG...CCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GACTCCCCCTTCTCCCCCTTGAGGCCGTCAGCGCCCGGGAGGCCGGACAAGCCCCACCCAGACACGCACTaGTGGTTTATTACACACAGT +
Preference number: 5 (lower is better)
Translates to: DSPFSPLRPSAPGRPDKPHPDTH*WFITHS
Trigger: ACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTG...GGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCCCTGGAAGTCCGGGCTaGCCATCCAAACCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: PRHSAPWSWVHITAITELPGSPG*PSKPRG
Trigger: ACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGG...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGCCTGGAAGTCCGGGCTaGCCATCCAAACCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQPGSPG*PSKPRG
Trigger: ACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGG...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACACCCAGCAGCTCCATCTaGTCCTTGGTCTCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTPSSSI*SLVSPG
Trigger: CCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGG...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGTGTCCGGGCTCTCCTTaGGGGCCCGCTGGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: GSTTAESLSADQVTEGPTCPGSP*GPAGPC
Trigger: ACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACA...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGTGTCCGGGCTCTCCTTaGGGGCCCGCTGGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: SNCRGSWLWLSLEADEARCPGSP*GPAGPC
Trigger: ACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACA...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCCCATCTCGCCGTCTaGTCCGGGCTCTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTAHLAV*SGLSFG
Trigger: CCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGC...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCAGTGGTCCAGGCTGGCTaGGTGTCCCATCGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: TLCSLELGPHHSDHRAQPVVQAG*VSHRRP
Trigger: AGGGCGACGATGGGACACCAAGCCAGCCTGGACCAC...TGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACTTTCCGGCAGCCACCCTTCTCTCCCTTaGCTCCATCCAAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GCPSGTHLPGLACPLSGSHPSLP*LHPSPW
Trigger: CCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTG...GCTGCCGGAAAGTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTCACCCTTCTCTCCCTTaGCTCCATCCAAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGHPSLP*LHPSPW
Trigger: CCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTG...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTCTGCCCTTCTCTCCTTaGGTTCCTGGCAGCCCAATA +
Preference number: 5 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPLPFSP*VPGSPI
Trigger: TATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAG...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGAGCTCAGCCACTACTCCTGGCCAGAGGACATGTGCTCTCATGGCAGGCTGGCCACATGCCGGTGGCTTaGGGGCTGGGTGGGCATACT +
Preference number: 5 (lower is better)
Translates to: RAQPLLLARGHVLSWQAGHMPVA*GLGGHT
Trigger: AGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTG...GCCAGCCTGCCATGAGAGCACATGTCCTCTGGCCAGGAGTAGTGGCTGAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACA +
Preference number: 5 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFRDSRV*RGQVLT
Trigger: TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCT...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGGCAGGCCCCCTAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACA +
Preference number: 5 (lower is better)
Translates to: GGGKASRQSVGGSGGRPPRDSRV*RGQVLT
Trigger: TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCT...AGGGGGCCTGCCACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCTCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PRHSAPWSWVHITAITELSGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: PRHSAPWSWVHITAITELSAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...GAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCAAAGTGTGTCTGGAGTaGGTTCCTGCCGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFKVCLE*VPAGGF
Trigger: GAACCCACCGGCAGGAACCAACTCCAGACACACTTT...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGACTTGGGGGCCCATCTCGCCGTCTaGTCCGGGCTCTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: TAHLESHFWPEFWVGDLGAHLAV*SGLSFG
Trigger: CCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGC...CCCCAAGTCTCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAGCCCTGGGGGTCCCTTaGGGCCCATCTCGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: FACTAHLESHFWPEFWVGALGVP*GPSRRL
Trigger: AAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGC...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGCTCCCTGGCTCGCCCTaGGGCCCTGGTGGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMLPGSP*GPGGPG
Trigger: GCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAG...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTTGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TGGGGCCCTTCTCTCCATCGATTCCTGGGGCACCGGGCAATCCAAGCTCGCCCTTGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: WGPSLHRFLGHRAIQARPCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...AGGGCGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACATCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTSGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRASGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCTGCTCAGGCCAGCTGGGAACCAGCCCTGAGCTTTGCTTTGCCTGCACAGCCCGGTTGCTGGGAACACTaGCTGGAGGTGGAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: PAQASWEPALSFALPAQPGCWEH*LEVEKP
Trigger: AGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACC...GGGCTGTGCAGGCAAAGCAAAGCTCAGGGCTGGTTCCCAGCTGGCCTGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTAAGCTCCATCTTGTCCTaGGTCTCCCCGGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLSSILS*VSPGAK
Trigger: TTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCT...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGACCCAGCAGCTCCATCTaGTCCTTGGTCTCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: FACTAHLESHFWPEFWVGPSSSI*SLVSPG
Trigger: CCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGG...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTGTGGTCCAGGCTGGCTaGGTGTCCCATCGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSVVQAG*VSHRRP
Trigger: AGGGCGACGATGGGACACCAAGCCAGCCTGGACCAC...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGTCGCCTGCTTCCCCTTaGAGTCCTGCTGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: MELVAGNTCWRWKSLSSESPASP*SPAGPG
Trigger: GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGA...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTTCGCCTGCTTCCCCTTaGAGTCCTGCTGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLSPASP*SPAGPG
Trigger: GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGA...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACATCGCCTGCTTCCCCTTaGAGTCCTGCTGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTSPASP*SPAGPG
Trigger: GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGA...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGGCTCCATCCAAGCCCTaGGGACCCTGGATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SNCRGSWLWLSLEADEARAPSKP*GPWIPW
Trigger: CCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGC...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCCAACTGCAGAGGCAGCTGGTTGTGGTTGAGTTTGGAGGCTGATGAGGCCAGGCACATGCCGGTGGCTTaGGGGCTGGGTGGGCATACT +
Preference number: 5 (lower is better)
Translates to: SNCRGSWLWLSLEADEARHMPVA*GLGGHT
Trigger: AGTATGCCCACCCAGCCCCAAAGCCACCGGCATGTG...CCTGGCCTCATCAGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCAGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGTCTCCCTGCTCGCCCTaGAGGCCTGGGGCACCCTGC +
Preference number: 5 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMSPCSP*RPGAPC
Trigger: GCAGGGTGCCCCAGGCCTCAAGGGCGAGCAGGGAGA...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407622.3
CDS-3UTR CAA 90 bp CCCAGGCCCAAGGGTGCCCCTCAGGTACACATCTCCCTGGTCTGGCCTGTCCACCCTGAACTTCCTCCTTaGGTTTCTGGGATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PRPKGAPQVHISLVWPVHPELPP*VSGMAL
Trigger: AAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAGG...GTGGACAGGCCAGACCAGGGAGATGTGTACCTGAGGGGCACCCTTGGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS CCA 90 bp CGGTGGGTTCGTGGTCTCGCTGACTTCAAAAAGGAAGCCACAGCGTaGTGGCAGGCGCCTATAATCCCAGCTGCTTGGGAGACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: RWVRGLADFKKEATA*WQAPIIPAAWETEA
Trigger: AGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCTGTGGCTTCCTTTTTGAAGTCAGCGAGACCACGAACCCACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS CCA 90 bp TCACACTTGAGTAGCCAGATCAGGTTACTTCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGGTGGGCCAACTGGCCCAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SHLSSQIRLLLSFGS*QPNKARWANWPRQA
Trigger: GGCCTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAGAAGTAACCTGATCTGGCTACTCAAGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679888.1
CDS-3UTR CAA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGACCTGGAAGTCCGGGCTaGCCATCCAAACCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: FACTAHLESHFWPEFWVGPGSPG*PSKPRG
Trigger: ACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGG...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGAGCTCCATCTTGTCCTaGGTCTCCCCGGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GSTTAESLSADQVTEGPTSSILS*VSPGAK
Trigger: TTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCT...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTGAACTTCCTCCTTTGGTTTCTGGGATGGCTCTTACTCAGGGAGGGTCCCCTTGGTCCGGGAGGCCCCTaGAGGGCATCCAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: LNFLLWFLGWLLLREGPLGPGGP*RASKIL
Trigger: CAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACC...AAGGGGACCCTCCCTGAGTAAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACACCCTTCTCTCCCTTaGCTCCATCCAAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LCSLELGPHHSDHRAQPLHPSLP*LHPSPW
Trigger: CCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTG...TAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGCTGCCCTTCTCTCCTTaGGTTCCTGGCAGCCCAATA +
Preference number: 5 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQLPFSP*VPGSPI
Trigger: TATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAG...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TCGCCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: SPFWPFTPFRPGTPRSPFWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...GAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RVCPRDSRVLRGQVLTGQCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...CTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCATCCGGGGGCCAAGTCTaGTCCAACTGCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSSGGQV*SNCRGS
Trigger: GCTGCCTCTGCAGTTGGACAAGACTTGGCCCCCGGA...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGAAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: FACTAHLESHFWPEFWVGSAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGCCAGGATGGAGCTGGTaGCTGGGAACACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAPGWSW*LGTLAG
Trigger: TCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGG...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS CCA 90 bp TGGGTTCGTGGTCTCGCTGACTTCAAAAAGGAAGCCACAGCGTGGTaGCAGGCGCCTATAATCCCAGCTGCTTGGGAGACTGAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: WVRGLADFKKEATAW*QAPIIPAAWETEAG
Trigger: TCCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCTGTGGCTTCCTTTTTGAAGTCAGCGAGACCACGAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR CAA 90 bp AGGATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAAGCTCCATCTTGTCCTaGGTCTCCCCGGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: RMELVAGNTCWRWKSLSSSSILS*VSPGAK
Trigger: TTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCT...TGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGCCCAGCAGCTCCATCTaGTCCTTGGTCTCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMPSSSI*SLVSPG
Trigger: CCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGG...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ATGGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGAATCCAAGCTCGCCCTaGGCTCCAGGGATCCCTGGT +
Preference number: 5 (lower is better)
Translates to: MELVAGNTCWRWKSLSSENPSSP*APGIPG
Trigger: ACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATT...CTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAAATCCAAGCTCGCCCTaGGCTCCAGGGATCCCTGGT +
Preference number: 5 (lower is better)
Translates to: LDRVCPRDSRVLRGQVLTNPSSP*APGIPG
Trigger: ACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATT...TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGTCGCCTGCTTCCCCTTaGAGTCCTGCTGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: VPLWVIMETETGSSSQSRSPASP*SPAGPG
Trigger: GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGA...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCACTGCCCTTCTCTCCTTaGGTTCCTGGCAGCCCAATA +
Preference number: 5 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSLPFSP*VPGSPI
Trigger: TATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAG...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CCCTTCTGGCCCTTCACTCCTTTCCGGCCGGGGACCCCTCGTTCTCCCTTCTCTTGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: PFWPFTPFRPGTPRSPFSWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...AGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTAGCATCTTTCTAGCCTaGCCCGAGCCAGGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPSIFLA*PEPGAS
Trigger: AGAAGCACCTGGCTCGGGCAAGGCTAGAAAGATGCT...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTCGACACTCTGCTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAAGCATCTTTCTAGCCTaGCCCGAGCCAGGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LDTLLPGAGSTSQRSQSSSIFLA*PEPGAS
Trigger: AGAAGCACCTGGCTCGGGCAAGGCTAGAAAGATGCT...TGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAGCAGAGTGTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACATGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGTGCCCCAGGGGCAGTCCACAAGGACAGGCACACCCAGACACGCACTTGTGGTCACCCAGACACGCACTaGTGGTTTATTACACACAGT +
Preference number: 5 (lower is better)
Translates to: GAPGAVHKDRHTQTRTCGHPDTH*WFITHS
Trigger: ACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTG...ACCACAAGTGCGTGTCTGGGTGTGCCTGTCCTTGTGGACTGCCCCTGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGTCTGGTGAAAGTGTGTCTGGAGTaGGTTCCTGCCGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: EHLLEVEKPLVRAWVGLVKVCLE*VPAGGF
Trigger: GAACCCACCGGCAGGAACCAACTCCAGACACACTTT...CACCAGACCCACCCACGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS GCA 90 bp GACACGTCACTGGGAACCGACGGGCCAGGAGCACCTCCAAAGCTCTaGGCCTGTCTAGCCACAGATGGAAATCTTCATCTCTGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: DTSLGTDGPGAPPKL*ACLATDGNLHLCVH
Trigger: ATGGACACAGAGATGAAGATTTCCATCTGTGGCTAGACAGGCGCAGAGCTTTGGAGGTGCTCCTGGCCCGTCGGTTCCCAGTGACGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484750.1
CDS CCA 90 bp CGGGCCAGGAGCACCTCCAAAGCTCTGCGCCTGTCTAGCCACAGATaGAAATCTTCATCTCTGTGTCCATGGAAGCTCGAGGATGGTGCT +
Preference number: 5 (lower is better)
Translates to: RARSTSKALRLSSHR*KSSSLCPWKLEDGA
Trigger: AGCACCATCCTCGAGCTTCCATGGACACAGAGATGAAGATTTCCATCTGTGGCTAGACAGGCGCAGAGCTTTGGAGGTGCTCCTGGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484750.1
CDS-3UTR CAA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGCCTGGAAGTCCGGGCTaGCCATCCAAACCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEPGSPG*PSKPRG
Trigger: ACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGG...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGAGTGCTGGGCGAGTCTaGTCCGGGGGCCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: LVQAMSYLVPLWVIMETESAGRV*SGGQVL
Trigger: CAAGACTTGGCCCCCGGACAAGACTCGCCCAGCACT...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGGGTTGCTGGGAACACTaGCTGGAGGTGGAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: GSTTAESLSADQVTEGPTGCWEH*LEVEKP
Trigger: AGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACC...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTCCAGGATGGAGCTGGTaGCTGGGAACACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLPGWSW*LGTLAG
Trigger: TCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGG...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACAGCTGAGAGTCTCTCTCCAGGATGGAGCTGGTaGCTGGGAACACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: EFCGGRFLQGSTTAESLSPGWSW*LGTLAG
Trigger: TCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGG...AGAGAGACTCTCAGCTGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS TCA 90 bp AAGTGTGTCTGGAGTTGGTTCCTGCCGGTGGGTTCGTGGTCTCGCTaGCTTCAAAAAGGAAGCCACAGCGTGGTGGCAGGCGCCTATAAT +
Preference number: 5 (lower is better)
Translates to: KCVWSWFLPVGSWSR*LQKGSHSVVAGAYN
Trigger: ATTATAGGCGCCTGCCACCACGCTGTGGCTTCCTTTTTGAAGTCAGCGAGACCACGAACCCACCGGCAGGAACCAACTCCAGACACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS TCA 90 bp GAACCAGTCAGTTGCAGTCCCAGCCCTGGGGAAAGGGGTCACACTTaGGTAGCCAGATCAGGTTACTTCTCTCCTTTGGTTCCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: EPVSCSPSPGERGHT*VARSGYFSPLVPGS
Trigger: GCTGCCAGGAACCAAAGGAGAGAAGTAACCTGATCTGGCTACTCAAGTGTGACCCCTTTCCCCAGGGCTGGGACTGCAACTGACTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679888.1
CDS CCA 90 bp GTCCAACTTCACGGTCAAAGTGTGTCTGGAGTTGGTTCCTGCCGGTaGGTTCGTGGTCTCGCTGACTTCAAAAAGGAAGCCACAGCGTGG +
Preference number: 5 (lower is better)
Translates to: VQLHGQSVSGVGSCR*VRGLADFKKEATAW
Trigger: CCACGCTGTGGCTTCCTTTTTGAAGTCAGCGAGACCACGAACCCACCGGCAGGAACCAACTCCAGACACACTTTGACCGTGAAGTTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGAGCTCCATCTTGTCCTaGGTCTCCCCGGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMSSILS*VSPGAK
Trigger: TTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCT...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAATCTCCCTGCTCGCCCTaGAGGCCTGGGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: TRTCGLLHTVISIYTEMESPCSP*RPGAPR
Trigger: CCGGGGTGCCCCAGGCCTCAAGGGCGAGCAGGGAGA...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390654.8
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGAATCCAAGCTCGCCCTaGGCTCCAGGGATCCCTGGT +
Preference number: 5 (lower is better)
Translates to: LVQAMSYLVPLWVIMETENPSSP*APGIPG
Trigger: ACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATT...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACA +
Preference number: 5 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLRDSRV*RGQVLT
Trigger: TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCT...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTTGCCTGCACAGCCCACCTAGAGAGCCATTTTTGGCCAGAGTTCTGGGTGGGATGCAGAGGCAGCTGGTaGTGGTTGAGTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: FACTAHLESHFWPEFWVGCRGSW*WLSLEA
Trigger: AGCCTCCAAACTCAACCACAACCAGCTGCCTCTGCA...TCCCACCCAGAACTCTGGCCAAAAATGGCTCTCTAGGTGGGCTGTGCAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGCACCCTTCTCTCCCTTaGCTCCATCCAAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMHPSLP*LHPSPW
Trigger: CCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTG...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACATGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGAGCTGGTTGCTGGGAACACTTGCTGGAGGTGGAAAAGCCTCTCGTCAGAGCGTGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: GAGCWEHLLEVEKPLVRAWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...CGCTCTGACGAGAGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGCCAGGATGGAGCTGGTaGCTGGGAACACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEPGWSW*LGTLAG
Trigger: TCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGG...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTACAGGGCAGTACCACACACCCAGACACGCACTaGTGGTTTATTACACACAGT +
Preference number: 5 (lower is better)
Translates to: VPGTPEFCGGRFLQGSTTHPDTH*WFITHS
Trigger: ACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTG...TGTGGTACTGCCCTGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTCCCTGGAGCTGGGTCCACATCACAGCGATCACAGAGCTCAGCCACTACTCCTCACCCAGACACGCACTaGTGGTTTATTACACACAGT +
Preference number: 5 (lower is better)
Translates to: LPGAGSTSQRSQSSATTPHPDTH*WFITHS
Trigger: ACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTG...AGGAGTAGTGGCTGAGCTCTGTGATCGCTGTGATGTGGACCCAGCTCCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCATGTCCGGGCTCTCCTTaGGGGCCCGCTGGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LWFITHSDLHLHGNGRQACPGSP*GPAGPC
Trigger: ACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACA...TGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGTGTCCGGGCTCTCCTTaGGGGCCCGCTGGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLCPGSP*GPAGPC
Trigger: ACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACA...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGCCCTGGGGGTCCCTTaGGGCCCATCTCGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEALGVP*GPSRRL
Trigger: AAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGC...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAGTGGTCCAGGCTGGCTaGGTGTCCCATCGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGVVQAG*VSHRRP
Trigger: AGGGCGACGATGGGACACCAAGCCAGCCTGGACCAC...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGGTGGTCCAGGCTGGCTaGGTGTCCCATCGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQVVQAG*VSHRRP
Trigger: AGGGCGACGATGGGACACCAAGCCAGCCTGGACCAC...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGCCAGGATGGCACCCTTCTCTCCCTTaGCTCCATCCAAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LHTVISIYTEMEGKQPGWHPSLP*LHPSPW
Trigger: CCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTG...CCATCCTGGCTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GTCCCTCTCTGGGTGATAATGGAAACAGAGACAGGAAGTAGCAGTCAGTCCAGGAGGGACTCCAGAGTTTaGCGGGGGCAGGTTCTTACA +
Preference number: 5 (lower is better)
Translates to: VPLWVIMETETGSSSQSRRDSRV*RGQVLT
Trigger: TGTAAGAACCTGCCCCCGCAAAACTCTGGAGTCCCT...CCTGGACTGACTGCTACTTCCTGTCTCTGTTTCCATTATCACCCAGAGAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCTGGGTGGGCATACTCTTGAATGTTAAAAGGCCACAGGTAGCGCATTCCATGGGTTGCTGGGAACACTaGCTGGAGGTGGAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: GWVGILLNVKRPQVAHSMGCWEH*LEVEKP
Trigger: AGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACC...CATGGAATGCGCTACCTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GGCAGTACCACAGCTGAGAGTCTCTCTGCTGATCAGGTGACTGAAGGCCCAACGCACCCAGACACGCACTaGTGGTTTATTACACACAGT +
Preference number: 5 (lower is better)
Translates to: GSTTAESLSADQVTEGPTHPDTH*WFITHS
Trigger: ACTGTGTGTAATAAACCACAAGTGCGTGTCTGGGTG...CGTTGGGCCTTCAGTCACCTGATCAGCAGAGAGACTCTCAGCTGTGGTACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTCCTGAACTTCCTCCTTaGGTTTCTGGGATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLPELPP*VSGMAL
Trigger: AAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAGG...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTTACAAAAATTAAAAATGTCCACACGGATCTGTACAGGTGTGAGCTGGGCCTGCCCAGCAGCTCCATCTaGTCCTTGGTCTCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: FTKIKNVHTDLYRCELGLPSSSI*SLVSPG
Trigger: CCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGG...CAGGCCCAGCTCACACCTGTACAGATCCGTGTGGACATTTTTAATTTTTGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGGCTCCATCCAAGCCCTaGGGACCCTGGATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQAPSKP*GPWIPW
Trigger: CCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGC...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TTCTTGGATAGGGTGTGTCCCAGGGACTCCAGAGTTTTGCGGGGGCAGGTTCTTTGGGTGGGCATACTCTaGAATGTTAAAAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: FLDRVCPRDSRVLRGQVLWVGIL*NVKRPQ
Trigger: CTGTGGCCTTTTAACATTCAAGAGTATGCCCACCCA...AAGAACCTGCCCCCGCAAAACTCTGGAGTCCCTGGGACACACCCTATCCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp CTGGTCCAGGCCATGTCCTATCTTGTCCCTCTCTGGGTGATAATGGAAACAGAGCCTGAACTTCCTCCTTaGGTTTCTGGGATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LVQAMSYLVPLWVIMETEPELPP*VSGMAL
Trigger: AAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAGG...CTCTGTTTCCATTATCACCCAGAGAGGGACAAGATAGGACATGGCCTGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGACACCCTTCTCTCCCTTaGCTCCATCCAAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGHPSLP*LHPSPW
Trigger: CCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTG...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGACTGCCCTTCTCTCCTTaGGTTCCTGGCAGCCCAATA +
Preference number: 5 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGLPFSP*VPGSPI
Trigger: TATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAG...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp TGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGCAAGCAGAGCATCTTTCTAGCCTaGCCCGAGCCAGGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: CGLLHTVISIYTEMEGKQSIFLA*PEPGAS
Trigger: AGAAGCACCTGGCTCGGGCAAGGCTAGAAAGATGCT...CTGCTTGCCTTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS-3UTR CAA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAACCAGGATGGAGCTGGTaGCTGGGAACACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEPGWSW*LGTLAG
Trigger: TCCAGCAAGTGTTCCCAGCAACCAGCTCCATCCTGG...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS TCA 90 bp CCATCTAGTCAGCAGATAGGTTGTGTGGTCAGAAAGGCAGGAAGGTaGTCTGAAGAACTACAAGGCTTTTTGAAACCTGGAGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: PSSQQIGCVVRKAGR*SEELQGFLKPGGKA
Trigger: GGCTTTGCCTCCAGGTTTCAAAAAGCCTTGTAGTTCTTCAGATCACCTTCCTGCCTTTCTGACCACACAACCTATCTGCTGACTAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646779.1
CDS-3UTR CAA 90 bp ACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGAAGGTTGCTGGGAACACTaGCTGGAGGTGGAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: TRTCGLLHTVISIYTEMEGCWEH*LEVEKP
Trigger: AGGCTTTTCCACCTCCAGCAAGTGTTCCCAGCAACC...TTCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390654.8
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS TCA 90 bp AAAGATGACACTGACACAAAGAGTGAGCAGCAAGGAGATTTATTGTaGAGAGCAAAAGAACAAAGCTCCCACAAGGTGAGGGACCCACGC +
Preference number: 5 (lower is better)
Translates to: KDDTDTKSEQQGDLL*RAKEQSSHKVRDPR
Trigger: GCGTGGGTCCCTCACCTTGTGGGAGCTTTGTTCTTTTGCTCTTCACAATAAATCTCCTTGCTGCTCACTCTTTGTGTCAGTGTCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484750.1
ENST00000680268.1
CDS CCA 90 bp CTGCGCCTGTCTAGCCACAGATGGAAATCTTCATCTCTGTGTCCATaGAAGCTCGAGGATGGTGCTTTCCTGTCATTTCCTTTCATTTAT +
Preference number: 5 (lower is better)
Translates to: LRLSSHRWKSSSLCP*KLEDGAFLSFPFIY
Trigger: ATAAATGAAAGGAAATGACAGGAAAGCACCATCCTCGAGCTTCCATGGACACAGAGATGAAGATTTCCATCTGTGGCTAGACAGGCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484750.1
CDS-3UTR CAA 90 bp GACACGCACTTGTGGTTTATTACACACAGTGATCTCCATCTACACGGAAATGGACCTGAACTTCCTCCTTaGGTTTCTGGGATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: DTHLWFITHSDLHLHGNGPELPP*VSGMAL
Trigger: AAGAGCCATCCCAGAAACCAAAGGAGGAAGTTCAGG...TCCATTTCCGTGTAGATGGAGATCACTGTGTGTAATAAACCACAAGTGCGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407622.3
ENST00000679896.1
ENST00000680268.1
ENST00000680889.1
ENST00000681261.1
CDS CCA 72 bp CGCGCTCGCCTGGGCCCATGGCGCGTTCGTCGCGCGTaGACTCTCCGAGGGGGCGGTGCTGCTGGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: RARLGPWRVRRA*TLRGGGAAGAE
Trigger: CTCTGCCCCAGCAGCACCGCCCCCTCGGAGAGTCCACGCGCGACGAACGCGCCATGGGCCCAGGCGAGCGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000390654.8
CDS TCA 72 bp GTCCGTCCAACTTCTCAGCCAGGCCCTGTCTGCCTCTaGCTGGAACAGCCCAGGACCGGGAGACTTCACCAG +
Preference number: 6 (lower is better)
Translates to: VRPTSQPGPVCL*LEQPRTGRLHQ
Trigger: CTGGTGAAGTCTCCCGGTCCTGGGCTGTTCCAGTCAGAGGCAGACAGGGCCTGGCTGAGAAGTTGGACGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484750.1
ENST00000680268.1
CDS CCA 72 bp GTCCAACTTCTCAGCCAGGCCCTGTCTGCCTCTGACTaGAACAGCCCAGGACCGGGAGACTTCACCAGGGCA +
Preference number: 6 (lower is better)
Translates to: VQLLSQALSASD*NSPGPGDFTRA
Trigger: TGCCCTGGTGAAGTCTCCCGGTCCTGGGCTGTTCCAGTCAGAGGCAGACAGGGCCTGGCTGAGAAGTTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484750.1
ENST00000680268.1
CDS CCA 72 bp GATCACCTTTCTCTCCTCGGGGTCCAGGGAAACCTCTaGGTCGTGCACTGGACTTGGCAATGGGGACACAGG +
Preference number: 6 (lower is better)
Translates to: DHLSLLGVQGNL*VVHWTWQWGHR
Trigger: CCTGTGTCCCCATTGCCAAGTCCAGTGCACGACCCAGAGGTTTCCCTGGACCCCGAGGAGAGAAAGGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679888.1
CDS GCA 72 bp CTGGGAACCGACGGGCCAGGAGCACCTCCAAAGCTCTaGGCCTGTCTAGCCACAGATGGAAATCTTCATCTC +
Preference number: 6 (lower is better)
Translates to: LGTDGPGAPPKL*ACLATDGNLHL
Trigger: GAGATGAAGATTTCCATCTGTGGCTAGACAGGCGCAGAGCTTTGGAGGTGCTCCTGGCCCGTCGGTTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484750.1
CDS CCA 72 bp CGTGGTCTCGCTGACTTCAAAAAGGAAGCCACAGCGTaGTGGCAGGCGCCTATAATCCCAGCTGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: RGLADFKKEATA*WQAPIIPAAWE
Trigger: CTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCTGTGGCTTCCTTTTTGAAGTCAGCGAGACCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS CCA 72 bp TCGCTAGTCCGTCCAACTTCACGGTCAAAGTGTGTCTaGAGTTGGTTCCTGCCGGTGGGTTCGTGGTCTCGC +
Preference number: 6 (lower is better)
Translates to: SLVRPTSRSKCV*SWFLPVGSWSR
Trigger: GCGAGACCACGAACCCACCGGCAGGAACCAACTCCAGACACACTTTGACCGTGAAGTTGGACGGACTAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS CCA 72 bp AGTAGCCAGATCAGGTTACTTCTCTCCTTTGGTTCCTaGCAGCCCAATAAGGCCCGGTGGGCCAACTGGCCC +
Preference number: 6 (lower is better)
Translates to: SSQIRLLLSFGS*QPNKARWANWP
Trigger: GGGCCAGTTGGCCCACCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAGAAGTAACCTGATCTGGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679888.1
CDS CAA 90 bp GGAACCAGTCAGTTGCAGTCCCAGCCCTGGGGAAAGGGGTCACACTaGAGTAGCCAGATCAGGTTACTTCTCTCCTTTGGTTCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GTSQLQSQPWGKGSH*SSQIRLLLSFGSWQ
Trigger: CTGCCAGGAACCAAAGGAGAGAAGTAACCTGATCTGGCTACTCAAGTGTGACCCCTTTCCCCAGGGCTGGGACTGCAACTGACTGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679888.1
CDS CCA 72 bp CACGGTCAAAGTGTGTCTGGAGTTGGTTCCTGCCGGTaGGTTCGTGGTCTCGCTGACTTCAAAAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: HGQSVSGVGSCR*VRGLADFKKEA
Trigger: GGCTTCCTTTTTGAAGTCAGCGAGACCACGAACCCACCGGCAGGAACCAACTCCAGACACACTTTGACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS CAA 90 bp ATCTTCGCTAGTCCGTCCAACTTCACGGTCAAAGTGTGTCTGGAGTaGGTTCCTGCCGGTGGGTTCGTGGTCTCGCTGACTTCAAAAAGG +
Preference number: 6 (lower is better)
Translates to: IFASPSNFTVKVCLE*VPAGGFVVSLTSKR
Trigger: CCTTTTTGAAGTCAGCGAGACCACGAACCCACCGGCAGGAACCAACTCCAGACACACTTTGACCGTGAAGTTGGACGGACTAGCGAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS TCA 72 bp CCTTGGTCTCCCTTGAGGATCCGGCGATTGTACAGGTaGTGGTCTCTACTTATAAAGCCCGGATTGAGCCGT +
Preference number: 6 (lower is better)
Translates to: PWSPLRIRRLYR*WSLLIKPGLSR
Trigger: ACGGCTCAATCCGGGCTTTATAAGTAGAGACCATCACCTGTACAATCGCCGGATCCTCAAGGGAGACCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646779.1
CDS TCA 72 bp AGTTGCAGTCCCAGCCCTGGGGAAAGGGGTCACACTTaGGTAGCCAGATCAGGTTACTTCTCTCCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: SCSPSPGERGHT*VARSGYFSPLV
Trigger: AACCAAAGGAGAGAAGTAACCTGATCTGGCTACTCAAGTGTGACCCCTTTCCCCAGGGCTGGGACTGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679888.1
CDS GCA 72 bp CAACTTCACGGTCAAAGTGTGTCTGGAGTTGGTTCCTaGCGGTGGGTTCGTGGTCTCGCTGACTTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: QLHGQSVSGVGS*RWVRGLADFKK
Trigger: CTTTTTGAAGTCAGCGAGACCACGAACCCACCGGCAGGAACCAACTCCAGACACACTTTGACCGTGAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679896.1
ENST00000681261.1
CDS TCA 72 bp CAGCAGATAGGTTGTGTGGTCAGAAAGGCAGGAAGGTaGTCTGAAGAACTACAAGGCTTTTTGAAACCTGGA +
Preference number: 6 (lower is better)
Translates to: QQIGCVVRKAGR*SEELQGFLKPG
Trigger: TCCAGGTTTCAAAAAGCCTTGTAGTTCTTCAGATCACCTTCCTGCCTTTCTGACCACACAACCTATCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646779.1