RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL22A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169436

Ensembl transcript IDs: ENST00000303045.11, ENST00000341807.8, ENST00000435777.2, ENST00000484387.1, ENST00000487854.1, ENST00000517515.1, ENST00000522546.1

Found 516 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTGGCTGGAGTGCACCCTGAGGGCTGATTCTGTGTTTTCCAAATaGACGTCCCGTCGGGAGGTGGGAACATTCCTCATGGTTGCAAAT +
Preference number: 1 (lower is better)
Translates to: RWLECTLRADSVFSK*TSRREVGTFLMVAN
Trigger: ATTTGCAACCATGAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAGGGTGCACTCCAGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR GCA 90 bp GAGACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTaGCCTGGCCAACTGCCCATCATTAGGGAAACACAAGTGGATGGT +
Preference number: 1 (lower is better)
Translates to: ETEPPWRYKFPSSGQ*PGQLPIIRETQVDG
Trigger: ACCATCCACTTGTGTTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR GCA 90 bp CTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTaGCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACT +
Preference number: 1 (lower is better)
Translates to: LGDTNFPALVSALAN*PSLGKHKWMVTTST
Trigger: AGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR CCA 90 bp AACCCACAGACATTATTTCACTTCTGTGAGCTTAGAGCACTGAGGTaGCTGGAGTGCACCCTGAGGGCTGATTCTGTGTTTTCCAAATGC +
Preference number: 1 (lower is better)
Translates to: NPQTLFHFCELRALR*LECTLRADSVFSKC
Trigger: GCATTTGGAAAACACAGAATCAGCCCTCAGGGTGCACTCCAGCCACCTCAGTGCTCTAAGCTCACAGAAGTGAAATAATGTCTGTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR TCA 90 bp TTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACATGCACTTaGTGCCATTTATTTCAGAGACAGAGCCGCCTTGGAGATACAAAT +
Preference number: 1 (lower is better)
Translates to: LSTCSGRACRIHTCT*CHLFQRQSRLGDTN
Trigger: ATTTGTATCTCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAGTGCATGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR TCA 90 bp TTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTCCTGGGTaGTCTCCGGGCATGACTGAGAATGAAGCCCATTGGCTCATTTTC +
Preference number: 1 (lower is better)
Translates to: LLSLDSGGVCIISPG*SPGMTENEAHWLIF
Trigger: GAAAATGAGCCAATGGGCTTCATTCTCAGTCATGCCCGGAGATCACCCAGGAGAAATAATACAAACACCACCACTGTCCAGAGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR CCA 90 bp ATTAACACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTaGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGAC +
Preference number: 1 (lower is better)
Translates to: INTQGLPLQHRFSHL*PRHMIPQSHCQPTD
Trigger: GTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGTGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR TCA 90 bp GGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATATaGTCCCACAAAGCCATTGCCAACCCACAGACATTATTTCACTTC +
Preference number: 1 (lower is better)
Translates to: GCLFNIGFPIFGQDI*SHKAIANPQTLFHF
Trigger: GAAGTGAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR TCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCGTGAGCTTAGAGCACTaGGGTGGCTGGAGTGCACCC +
Preference number: 2 (lower is better)
Translates to: SRLGDTNFPALVSALANCVSLEH*GGWSAP
Trigger: GGGTGCACTCCAGCCACCTCAGTGCTCTAAGCTCAC...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CCA 90 bp ACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACCTCTGGCTTCCCACTaGGCTCTGAGTTCAAGTTTC +
Preference number: 2 (lower is better)
Translates to: TEPPWRYKFPSSGQCPGQPLASH*ALSSSF
Trigger: GAAACTTGAACTCAGAGCCCAGTGGGAAGCCAGAGG...TTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR TCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACAGGGCTGTCAGAAGAATaGAGAAACAATCTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: LRADSVFSKCTSRREVGTGLSEE*RNNLLP
Trigger: GGGCAGGAGATTGTTTCTTCATTCTTCTGACAGCCC...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR TCA 90 bp ACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTTCCCACTGGGCTCTaGGTTCAAGTTTCAGAAATC +
Preference number: 2 (lower is better)
Translates to: TEPPWRYKFPSSGQCPGQLPTGL*VQVSEI
Trigger: GATTTCTGAAACTTGAACTCAGAGCCCAGTGGGAAG...TTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR TCA 90 bp ACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAATTTGGCCAAGACATATaGTCCCACAAAGCCATTGCC +
Preference number: 2 (lower is better)
Translates to: TEPPWRYKFPSSGQCPGQFGQDI*SHKAIA
Trigger: GGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAA...TTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR TCA 90 bp ACTGGACATACTGAACACCATACTGGACAGTCTGGCACTGTTCCAGGGGCTAAGCCCTGCTTCTTGATGTaGGAAAGGGGTCCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: TGHTEHHTGQSGTVPGAKPCFLM*ERGPRN
Trigger: ATTCCTGGGACCCCTTTCTCACATCAAGAAGCAGGG...CTTAGCCCCTGGAACAGTGCCAGACTGTCCAGTATGGTGTTCAGTATGTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522546.1
3UTR-3UTR TCA 90 bp GGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCAAAGGAACACATGGCTaGAGTCTTTCAAGACCTCTG +
Preference number: 2 (lower is better)
Translates to: GLILCFPNARPVGRWEHSKGTHG*SLSRPL
Trigger: CAGAGGTCTTGAAAGACTTCAGCCATGTGTTCCTTT...GGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR GCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCATCCCACAAAGCCATTaGCAACCCACAGACATTATT +
Preference number: 2 (lower is better)
Translates to: SRLGDTNFPALVSALANCIPQSH*QPTDII
Trigger: AATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGAT...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR GCA 90 bp GGAAACTTGGATTTATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACAAGTGCCCTGGCCAACTaGCCATCATTAGGGAAACAC +
Preference number: 2 (lower is better)
Translates to: GNLDLLSTCSGRACRIHTSALAN*PSLGKH
Trigger: GTGTTTCCCTAATGATGGGCAGTTGGCCAGGGCACT...TGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCCTTAGAGCACTGAGGTaGCTGGAGTGCACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFLRALR*LECTLR
Trigger: CCTCAGGGTGCACTCCAGCCACCTCAGTGCTCTAAG...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR CAA 90 bp ATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACATGCACTaGATGCCATTTATTTCAGAGACAGAGCCGCCTTGGAGATACAAA +
Preference number: 2 (lower is better)
Translates to: IEHLFRQGMSHTHMH*MPFISETEPPWRYK
Trigger: TTTGTATCTCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAGTGCATGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR GCA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCTCTGTGTTTTCCAAATaGACGTCCCGTCGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCSVFSK*TSRREV
Trigger: CACCTCCCGACGGGACGTGCATTTGGAAAACACAGA...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGCCTCTGGCTTCCCACTaGGCTCTGAGTTCAAGTTTC +
Preference number: 2 (lower is better)
Translates to: NEETISCPTNQVFPTLKEPLASH*ALSSSF
Trigger: GAAACTTGAACTCAGAGCCCAGTGGGAAGCCAGAGG...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
3UTR-3UTR GCA 90 bp ACTGGACATACTGAACACCATACTGGACAGTCTGGCACTGTTCCAGGGGCTAAGTCAAAAATCCTGTGGTaGTGGTTAAAAATGCAGATT +
Preference number: 2 (lower is better)
Translates to: TGHTEHHTGQSGTVPGAKSKILW*WLKMQI
Trigger: AATCTGCATTTTTAACCAGCACCACAGGATTTTTGA...CTTAGCCCCTGGAACAGTGCCAGACTGTCCAGTATGGTGTTCAGTATGTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000522546.1
3UTR-3UTR CCA 90 bp CTTTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTTGTATTATTTCTCCTaGGTGATCTCCGGGCATGAC +
Preference number: 2 (lower is better)
Translates to: LWPRHMIPQSHCQPTDIILYYFS*VISGHD
Trigger: GTCATGCCCGGAGATCACCCAGGAGAAATAATACAA...AATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CCA 90 bp CATACTGAACACCATACTGGACAGTCTGGCACTGTTCCAGGGGCTAAGAATTCAGTGTCAAAAATCCTGTaGTGCTGGTTAAAAATGCAG +
Preference number: 2 (lower is better)
Translates to: HTEHHTGQSGTVPGAKNSVSKIL*CWLKMQ
Trigger: CTGCATTTTTAACCAGCACCACAGGATTTTTGACAC...TGAATTCTTAGCCCCTGGAACAGTGCCAGACTGTCCAGTATGGTGTTCAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000522546.1
3UTR-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGTTTCAGAAATCCACTaGAGTCTTCTGGCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: DRPAASVGFNNFEVSQENVSEIH*SLLAFQ
Trigger: CTGGAAAGCCAGAAGACTGCAGTGGATTTCTGAAAC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
3UTR-3UTR CCA 90 bp GGAAACTTGGATTTATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACACCAACTTTAAAGGAGTaGAAAAGAACTCACAAAGCA +
Preference number: 2 (lower is better)
Translates to: GNLDLLSTCSGRACRIHTPTLKE*KRTHKA
Trigger: TGCTTTGTGAGTTCTTTTCCACTCCTTTAAAGTTGG...TGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CCA 90 bp CTTGATGCCATTTATTTCAGAGACAGAGCCGCCTTGGAGATACAAATTTCCCAGAGAGTTTCCTTAAAATaGGCAGTTACGCGTCAGATG +
Preference number: 2 (lower is better)
Translates to: LDAIYFRDRAALEIQISQRVSLK*AVTRQM
Trigger: CATCTGACGCGTAACTGCCCATTTTAAGGAAACTCT...CTGGGAAATTTGTATCTCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR TCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACTTCCCACTGGGCTCTaGGTTCAAGTTTCAGAAATC +
Preference number: 2 (lower is better)
Translates to: RPAASVGFNNFEVSQENKLPTGL*VQVSEI
Trigger: GATTTCTGAAACTTGAACTCAGAGCCCAGTGGGAAG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
3UTR-3UTR CCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCACTCTCTCTGGACAGTaGTGGTGTTTGTATTATTTC +
Preference number: 2 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFTLSGQ*WCLYYF
Trigger: GAAATAATACAAACACCACCACTGTCCAGAGAGAGT...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR TCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTAAAGGAACACATGGCTaGAGTCTTTCAAGACCTCTG +
Preference number: 2 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSKGTHG*SLSRPL
Trigger: CAGAGGTCTTGAAAGACTTCAGCCATGTGTTCCTTT...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
3UTR-3UTR GCA 90 bp TTCTCTTTCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCGTTTCAGAAATCCACTaGAGTCTTCTGGCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: FSFCFFTLSGQWWCLYYFVSEIH*SLLAFQ
Trigger: CTGGAAAGCCAGAAGACTGCAGTGGATTTCTGAAAC...GAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGAAAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CCA 90 bp CTTTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTGAGAATGAAGCCCATTaGCTCATTTTCTTAAAGTTT +
Preference number: 2 (lower is better)
Translates to: LWPRHMIPQSHCQPTDIIENEAH*LIFLKF
Trigger: AAACTTTAAGAAAATGAGCCAATGGGCTTCATTCTC...AATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATTGGGAACATTCCTCATaGTTGCAAATTCTTTCTCTT +
Preference number: 2 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNWEHSS*LQILSL
Trigger: AAGAGAAAGAATTTGCAACCATGAGGAATGTTCCCA...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR GCA 72 bp GAGTGCACCCTGAGGGCTGATTCTGTGTTTTCCAAATaGACGTCCCGTCGGGAGGTGGGAACATTCCTCATG +
Preference number: 3 (lower is better)
Translates to: ECTLRADSVFSK*TSRREVGTFLM
Trigger: CATGAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAGGGTGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR GCA 72 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTaGCCATCATTAGGGAAACACAAGTGGATGGTCACC +
Preference number: 3 (lower is better)
Translates to: TNFPALVSALAN*PSLGKHKWMVT
Trigger: GGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CAA 90 bp ACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAAGATCCCACAAAGCCATaGCCAACCCACAGACATTAT +
Preference number: 3 (lower is better)
Translates to: TEPPWRYKFPSSGQCPGQDPTKP*PTHRHY
Trigger: ATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATC...TTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR TCA 72 bp CTGGACAGTGGTGGTGTTTGTATTATTTCTCCTGGGTaGTCTCCGGGCATGACTGAGAATGAAGCCCATTGG +
Preference number: 3 (lower is better)
Translates to: LDSGGVCIISPG*SPGMTENEAHW
Trigger: CCAATGGGCTTCATTCTCAGTCATGCCCGGAGATCACCCAGGAGAAATAATACAAACACCACCACTGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR TCA 72 bp TGTTCAGGCAGGGCATGTCGCATACACACATGCACTTaGTGCCATTTATTTCAGAGACAGAGCCGCCTTGGA +
Preference number: 3 (lower is better)
Translates to: CSGRACRIHTCT*CHLFQRQSRLG
Trigger: TCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAGTGCATGTGTGTATGCGACATGCCCTGCCTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR CCA 72 bp ACATTATTTCACTTCTGTGAGCTTAGAGCACTGAGGTaGCTGGAGTGCACCCTGAGGGCTGATTCTGTGTTT +
Preference number: 3 (lower is better)
Translates to: TLFHFCELRALR*LECTLRADSVF
Trigger: AAACACAGAATCAGCCCTCAGGGTGCACTCCAGCCACCTCAGTGCTCTAAGCTCACAGAAGTGAAATAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR CCA 72 bp CAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTaGCCAAGACATATGATCCCACAAAGCCATTGCCAA +
Preference number: 3 (lower is better)
Translates to: QGLPLQHRFSHL*PRHMIPQSHCQ
Trigger: TTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR CCA 72 bp ATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTaGGAACATTCCTCATGGTTGCAAATTCTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: ILCFPNARPVGR*EHSSWLQILSL
Trigger: AAGAGAAAGAATTTGCAACCATGAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CAA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCGACCGGCAGCGTCTGTaGGATTTAATAATTTTGAGG +
Preference number: 3 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFDRQRL*DLIILR
Trigger: CCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR TCA 72 bp AATGCAGATTCCTGGGATCTACCCTGCTTCTTGATGTaGGAAAGGGGTCCCAGGAATATGCATTTAAACTTG +
Preference number: 3 (lower is better)
Translates to: NADSWDLPCFLM*ERGPRNMHLNL
Trigger: CAAGTTTAAATGCATATTCCTGGGACCCCTTTCTCACATCAAGAAGCAGGGTAGATCCCAGGAATCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522546.1
3UTR TCA 72 bp TTCAACATAGGTTTTCCCATCTTTGGCCAAGACATATaGTCCCACAAAGCCATTGCCAACCCACAGACATTA +
Preference number: 3 (lower is better)
Translates to: FNIGFPIFGQDI*SHKAIANPQTL
Trigger: TAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR-3UTR CAA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGGACCGGCAGCGTCTGTaGGATTTAATAATTTTGAGG +
Preference number: 3 (lower is better)
Translates to: NEETISCPTNQVFPTLKEDRQRL*DLIILR
Trigger: CCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
3UTR-3UTR CAA 90 bp ACCCTGCTTCTTGATGTGAGAAAGGGGTCCCAGGAATATGCATTTAAACTTGTTGATACCAACACTTCATaGGCATCAGTAAGGCAAAAC +
Preference number: 3 (lower is better)
Translates to: TLLLDVRKGSQEYAFKLVDTNTS*ASVRQN
Trigger: GTTTTGCCTTACTGATGCCAATGAAGTGTTGGTATC...AACAAGTTTAAATGCATATTCCTGGGACCCCTTTCTCACATCAAGAAGCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522546.1
3UTR-3UTR CAA 90 bp CTTTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTGAACATTCCTCATGGTaGCAAATTCTTTCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: LWPRHMIPQSHCQPTDIIEHSSW*QILSLS
Trigger: AGAAAGAGAAAGAATTTGCAACCATGAGGAATGTTC...AATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR CCA 72 bp TTTCTTTTGAAGAAAGAGGTAAATTTGCCAAGTGTCTaGTCAGGGTTTTGTAGCACCAAGAGTTTCCTTAAA +
Preference number: 3 (lower is better)
Translates to: FLLKKEVNLPSV*SGFCSTKSFLK
Trigger: TTTAAGGAAACTCTTGGTGCTACAAAACCCTGACCAGACACTTGGCAAATTTACCTCTTTCTTCAAAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCGGCAAAGATGCGGATaGCAGCGCGGTGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCRQRCG*QRGGLP
Trigger: CGGCAGCCCACCGCGCTGGCATCCGCATCTTTGCCG...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCGGGCCCCTTGGTCCTTaGGGACCCTGTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCGPLGP*GPCGPV
Trigger: CACTGGGCCACAGGGTCCCCAAGGACCAAGGGGCCC...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACAGCCCGGTGGGCCCCTTaGTCCTTGGGGACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LRADSVFSKCTSRREVGTARWAP*SLGTLW
Trigger: CCACAGGGTCCCCAAGGACCAAGGGGCCCACCGGGC...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCGGAGGCACTCAGGGGTaGCAGCGGAGGTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCGGTQG*QRRSSP
Trigger: AGGACTGGACCTCCGCTGGCACCCCTGAGTGCCTCC...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCTGGCTCTCCTGCTTTaGCCGGCTCTCCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCLALLL*PALQGD
Trigger: GTCCCCCTGGAGAGCCGGGCAAAGCAGGAGAGCCAG...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCTCCCCGGGGACCGGGTaGACCAGAATCGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCSPGTG*TRIACV
Trigger: CACACAGGCGATTCTGGTGCACCCGGTCCCCGGGGA...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGCCGGGCAGCCGCCTTaGCCTCCTCCTGCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRAGQPP*PPPASQ
Trigger: TTGGCTCGCAGGAGGAGGTCAAGGCGGCTGCCCGGC...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCGGTCCAGTGGGTCCCTaGGGCCCCAATTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCGPVGP*GPNSPG
Trigger: TCCTGGAGAATTGGGGCCTCAGGGACCCACTGGACC...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCTCCCTGGGGTCCTaGCACACCAGAAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LRADSVFSKCTSRREVGTFSLGS*HTRRAG
Trigger: CCCGGCCCTTCTGGTGTGGCAGGACCCCAGGGAGAA...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACACCAACTCGAAGGCCGTaGTGGGCCGGTCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LRADSVFSKCTSRREVGTPTRRP*WAGRCS
Trigger: GCTACAGCGACCGGCCCACCACGGCCTTCGAGTTGG...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACAAGGGTCACATTGGCCTaGGGGACCGGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LRADSVFSKCTSRREVGTRVTLA*GTGRSW
Trigger: CCAGGACCTCCCGGTCCCCCAGGCCAATGTGACCCT...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGCAGCTCCTCCTTGAGTaGCTCGCCCACGCCCACGGC +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRQLLLE*LAHAHG
Trigger: GCCGTGGGCGTGGGCGAGGCACTCAAGGAGGAGCTG...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTTCTCCTGGATTTCCTaGTGCACCGTCCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GLILCFPNARPVGRWEHSFSWIS*CTVPAG
Trigger: GCCGGCCGGGACGGTGCACCAGGAAATCCAGGAGAA...GGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTCCATTCTTGCCCGGTaGGCCCCTTGGTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLILCFPNARPVGRWEHSSILAR*APWSLG
Trigger: CCCCAAGGACCAAGGGGCCCACCGGGCAAGAATGGA...GGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGAGAAGCTGCGGGCCGTaGTGTAGCGGAGCGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRRSCGP*CSGARL
Trigger: GAGACGCGCTCCGCTACATCACGGCCCGCAGCTTCT...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACACTCTTGCTGCACCACTaGGCCTGGTACACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRADSVFSKCTSRREVGTLLLHH*AWYTRW
Trigger: CCACCTGGTGTACCAGGCTCAGTGGTGCAGCAAGAG...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCGCACCACGTTCTCCTTaGCTTCCCTGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCAPRSP*LPCGPA
Trigger: AGCTGGACCACAGGGAAGTCAAGGAGAACGTGGTGC...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGCTCTCCAGGTCGGCCTaGCAGGCCCTGCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRLSRSA*QALLPN
Trigger: ATTGGGGAGCAGGGCCTGGCAGGCCGACCTGGAGAG...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTCCAGGAGCCCCATGTaGACCTTCCTGTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GLILCFPNARPVGRWEHSSRSPM*TFLSLG
Trigger: GCCAAGGGACAGGAAGGTGCACATGGGGCTCCTGGA...GGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp ACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATATGCTGCCCAGGACGACCTaGCTCCCCCATGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TQGLPLQHRFSHLWPRHMLPRTT*LPHGAG
Trigger: GCCGGCCCCATGGGGGAGCCAGGTCGTCCTGGGCAG...CATATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTTCCCCGGGTTGACCTaGGATTCCAGGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GLILCFPNARPVGRWEHSFPGLT*DSRGSH
Trigger: ATGGGACCCCCTGGAATCCCAGGTCAACCCGGGGAA...GGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACAGGCCCAGGTCTGCCTTaGGATGACTTCATGTACGCC +
Preference number: 4 (lower is better)
Translates to: LRADSVFSKCTSRREVGTGPGLP*DDFMYA
Trigger: GGCGTACATGAAGTCATCTCAAGGCAGACCTGGGCC...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCCGACCCCCACACGGGTaGGGTCGGGGCCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFRPPHG*GRGPPR
Trigger: TCGAGGTGGGCCCCGACCGCACCCGTGTGGGGGTCG...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACAGCCTTGACCTCCTCCTaGGAGCCAAAGAGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LRADSVFSKCTSRREVGTALTSS*EPKSPN
Trigger: GTTGGGACTCTTTGGCTCGCAGGAGGAGGTCAAGGC...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp ACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTCAGGGCCATCTTGTaGCAGTCCCGGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TEPPWRYKFPSSGQCPGQLRAIL*QSRSKR
Trigger: CCTCTTTGACCGGGACTGGCACAAGATGGCCCTGAG...TTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGACCGGGGTTTCCAGCTaGTCCAGGAGCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRTGVSS*SRSPMC
Trigger: GCACATGGGGCTCCTGGAGCAGCTGGAAACCCCGGT...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTGGTCCAGCAGCTCCTaGAATTCCATCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLILCFPNARPVGRWEHSWSSSS*NSICPW
Trigger: CCAGGGGCAGATGGAATTGCAGGAGCTGCTGGACCA...GGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCGAGACGTTCTGGGCCTaGATGCTCAGGGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GLILCFPNARPVGRWEHSETFWA*MLRAIL
Trigger: CAAGATGGCCCTGAGCATCCAGGCCCAGAACGTCTC...GGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGAATCTGTTCACTGCCTaGGGTGGGAGGCCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRNLFTA*GGRPLG
Trigger: CCCCAGCGGCCTCCCACCCCAGGCAGTGAACAGATT...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GGAAACTTGGATTTATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACAAGTCCAGGTGGTCCTTaGGGCCCCCGCATGCCGACC +
Preference number: 4 (lower is better)
Translates to: GNLDLLSTCSGRACRIHTSPGGP*GPRMPT
Trigger: GGTCGGCATGCGGGGGCCCCAAGGACCACCTGGACT...TGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTCTCCTTTGTCTCCTGGTaGTCCGGAAGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ADSVFSKCTSRREVGTFLSFVSW*SGRARR
Trigger: CCTCCTGGCCCTTCCGGACCACCAGGAGACAAAGGA...GAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGAAATGGGAAGGGTCACATTaGCCTGGGGGACCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TNFPALVSALANCPSLGKWEGSH*PGGPGG
Trigger: ACCTCCCGGTCCCCCAGGCCAATGTGACCCTTCCCA...TTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp GGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCCTCGGAAGACCACCCTaGCAGCATCTTTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: GLILCFPNARPVGRWEHSLGRPP*QHLSWH
Trigger: GTGCCATGAAAGATGCTGTCAGGGTGGTCTTCCGAG...GGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCGGTCAAAGAGGTCATTaGCCCGAGAACCTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCGQRGH*PENLGR
Trigger: TCTTCCGAGGTTCTCGGGTCAATGACCTCTTTGACC...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGAAAGTGAGCTTAGAGCACTaGGGTGGCTGGAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: TNFPALVSALANCPSLGKVSLEH*GGWSAP
Trigger: GGGTGCACTCCAGCCACCTCAGTGCTCTAAGCTCAC...TTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAACGACCCCCACACGGGTaGGGTCGGGGCCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVERPPHG*GRGPPR
Trigger: TCGAGGTGGGCCCCGACCGCACCCGTGTGGGGGTCG...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAACTTGGGGCCCCCGCATaGCGACCTCACCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKLGAPA*RPHPAA
Trigger: GGCTGCCGGGTGAGGTCGGCATGCGGGGGCCCCAAG...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CTGCTTCTTGATGTGAGAAAGGGGTCCCAGGAATATGCATTTAAACTTGTTCTCCTTGGGGCCCCCGCATaGCGACCTCACCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLLDVRKGSQEYAFKLVLLGAPA*RPHPAA
Trigger: GGCTGCCGGGTGAGGTCGGCATGCGGGGGCCCCAAG...GAGAACAAGTTTAAATGCATATTCCTGGGACCCCTTTCTCACATCAAGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR GCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCTCTGTGTTTTCCAAATaGACGTCCCGTCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCSVFSK*TSRREV
Trigger: CACCTCCCGACGGGACGTGCATTTGGAAAACACAGA...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACAGAGAAGACACTTCCTTaGGGAGAAACGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRADSVFSKCTSRREVGTEKTLP*GETPQP
Trigger: AGGCTGCGGCGTTTCTCCCCAAGGAAGTGTCTTCTC...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTTTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTGGACCCCGAGCTCCTaGAGGACCGGGGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: LWPRHMIPQSHCQPTDIIWTPSS*RTGGAL
Trigger: CAAGGCGCCCCCGGTCCTCCAGGAGCTCGGGGTCCA...AATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GGAAACTTGGATTTATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACACTCCCCATCTTTCCCTaGGGTGCCTCTGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GNLDLLSTCSGRACRIHTLPIFP*GASEAG
Trigger: CCCGGCCTCAGAGGCACCCCAGGGAAAGATGGGGAG...TGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGGATCCTTTGTCTCCTaGTGGTCCGGAAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRGSFVS*WSGRAR
Trigger: CCTGGCCCTTCCGGACCACCAGGAGACAAAGGATCC...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp ACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAAAGGCCCTCTTTCTCCTaGATTTCCTGGTGCACCGTC +
Preference number: 4 (lower is better)
Translates to: TEPPWRYKFPSSGQCPGQRPSFS*ISWCTV
Trigger: GACGGTGCACCAGGAAATCCAGGAGAAAGAGGGCCT...TTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GGAAACTTGGATTTATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACATCCCTTGAAGCCAGGTaGGCCTCGGGCACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GNLDLLSTCSGRACRIHTSLEAR*ASGTLW
Trigger: CCAGAGGGTGCCCGAGGCCCACCTGGCTTCAAGGGA...TGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGAAACCTGTGTGGCCTTTGTaGCCTGGGATTCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TNFPALVSALANCPSLGKPVWPL*PGIPGS
Trigger: GGACCCTGGAATCCCAGGCCACAAAGGCCACACAGG...TTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCTGCCCAGGACGACCTaGCTCCCCCATGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENLPRTT*LPHGAG
Trigger: GCCGGCCCCATGGGGGAGCCAGGTCGTCCTGGGCAG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCTGCTGTACTGGTCGATaGCCTGCCAGATATACCAGT +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCCCTGR*PARYTS
Trigger: ACTGGTATATCTGGCAGGTCATCGACCAGTACAGCA...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp CTTGATGCCATTTATTTCAGAGACAGAGCCGCCTTGGAGATACAAATTTCCCAGCGCCTGTGTGTCCCTTaGAGCCAGGTGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LDAIYFRDRAALEIQISQRLCVP*SQVGLG
Trigger: CCCGAGGCCCACCTGGCTTCAAGGGACACACAGGCG...CTGGGAAATTTGTATCTCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp TCTGGTCAGGGTTTTGTAGCACCAAGAGTTTCCTTAAAATGGGCAGTTACGCGTGGTCCTGTCTCCCCTTaGGGGCCAGGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGQGFVAPRVSLKWAVTRGPVSP*GPGIPG
Trigger: TCCTGGGATCCCTGGCCCTCAAGGGGAGACAGGACC...ACGCGTAACTGCCCATTTTAAGGAAACTCTTGGTGCTACAAAACCCTGACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp GCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTCGGCTGGAGTGCACCCTaGGGGCTGATTCTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: ADSVFSKCTSRREVGTFLGWSAP*GLILCF
Trigger: AAAACACAGAATCAGCCCTCAGGGTGCACTCCAGCC...GAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CTGCCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATCAGAAGGGCCGGGCCTaGCCTGCTGTCCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LPIIRETQVDGHHIHLFYQKGRA*PAVLCP
Trigger: GGGACACAGGACAGCAGGGCAGGCCCGGCCCTTCTG...ATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGAAATCCTATGTCTCCCTTTaGACCAGGGAGCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: TNFPALVSALANCPSLGKSYVSL*TREPHG
Trigger: CCCATGGGGCTCCCTGGTCCAAAGGGAGACATAGGA...TTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAATGGACCCCGAGCTCCTaGAGGACCGGGGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEWTPSS*RTGGAL
Trigger: CAAGGCGCCCCCGGTCCTCCAGGAGCTCGGGGTCCA...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AACACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATTCCCTTGGCACCCGGTaGTCCAGTGGGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NTQGLPLQHRFSHLWPRHSLGTR*SSGSLR
Trigger: CCTCAGGGACCCACTGGACCACCGGGTGCCAAGGGA...ATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACAATCCTTCCCTTTTCCGGGTaGCCCAGGGAGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KMGSYASDGGCQKNEETILPFSG*PREPRS
Trigger: GCTCCTGGGCTCCCTGGGCCACCCGGAAAAGGGAAG...GATTGTTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATCTCCCTGGCTTTCCTaGGACACCTTTGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LRADSVFSKCTSRREVGTSPWLS*DTFVPF
Trigger: AAAGGGGACAAAGGTGTCCCAGGAAAGCCAGGGAGA...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGCCCGGTGGGCCCCTTaGTCCTTGGGGACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKARWAP*SLGTLW
Trigger: CCACAGGGTCCCCAAGGACCAAGGGGCCCACCGGGC...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCCCTGGAAATCCCGGCTaGCCTGGAGGCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFPGNPG*PGGPGG
Trigger: ACCCCCAGGGCCTCCAGGCCAGCCGGGATTTCCAGG...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTTTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTGGGGCCGGCCCGGCCTaGAAGCCCATCTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LWPRHMIPQSHCQPTDIIGAGPA*KPIFSR
Trigger: CCTGGAAAAGATGGGCTTCCAGGCCGGGCCGGCCCC...AATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TCTGGTCAGGGTTTTGTAGCACCAAGAGTTTCCTTAAAATGGGCAGTTACGCGTGCCGGGCAGCAAGGCTaGCGAAGTAGGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: SGQGFVAPRVSLKWAVTRAGQQG*RSRHTG
Trigger: CCCAGTGTGCCTACTTCGCCAGCCTTGCTGCCCGGC...ACGCGTAACTGCCCATTTTAAGGAAACTCTTGGTGCTACAAAACCCTGACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGGCCGGGCAGCCGCCTTaGCCTCCTCCTGCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEAGQPP*PPPASQ
Trigger: TTGGCTCGCAGGAGGAGGTCAAGGCGGCTGCCCGGC...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCACTTCTGTGAGCTTACCAGGTTCCCCGGGTTaGCCTGGGATTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: DPTKPLPTHRHYFTSVSLPGSPG*PGIPGG
Trigger: ACCCCCTGGAATCCCAGGTCAACCCGGGGAACCTGG...TAAGCTCACAGAAGTGAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp ACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAAGGGCTGTCAGAAGAATaGAGAAACAATCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TEPPWRYKFPSSGQCPGQGLSEE*RNNLLP
Trigger: GGGCAGGAGATTGTTTCTTCATTCTTCTGACAGCCC...TTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGAAACCTTTCAAGCCCTCTTaGTGCACCACTGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TNFPALVSALANCPSLGKPFKPS*CTTEPG
Trigger: ACCAGGCTCAGTGGTGCAGCAAGAGGGCTTGAAAGG...TTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGAAATTCCCTCGGAGACCTTaGAAACCAGGAGGTCCATCC +
Preference number: 4 (lower is better)
Translates to: TNFPALVSALANCPSLGKFPRRP*KPGGPS
Trigger: GGATGGACCTCCTGGTTTGCAAGGTCTCCGAGGGAA...TTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGGTCCTGGAGGGCCCTaGAGCCCCAGCAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKGPGGP*SPSNPG
Trigger: CCCTGGATTGCTGGGGCTGCAGGGCCCTCCAGGACC...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTCTCCAGGACGGCCCTaGAGTCCCGGTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENSPGRP*SPGSPG
Trigger: GCCTGGGGAACCGGGACTGCAGGGCCGTCCTGGAGA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCCAACTGGCCCTGGGCTaGCTTCTTCCCCCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFQLALG*LLPPLH
Trigger: GTGCAGCGGGGGAAGAAGGCAGCCCAGGGCCAGTTG...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CTTGATGCCATTTATTTCAGAGACAGAGCCGCCTTGGAGATACAAATTTCCCAGGGCCAGCAACCCCAATaGCTGGGTCACCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: LDAIYFRDRAALEIQISQGQQPQ*LGHHGC
Trigger: GCAGCCGTGGTGACCCAGGCATTGGGGTTGCTGGCC...CTGGGAAATTTGTATCTCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTGCCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATACTCGAAGGCCGTGGTaGGCCGGTCGCTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: LPIIRETQVDGHHIHLFYTRRPW*AGRCSA
Trigger: TGCGCTACAGCGACCGGCCCACCACGGCCTTCGAGT...ATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCATCACAGTCTTGCCCTaGATGTCAATGTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SRLGDTNFPALVSALANCITVLP*MSMFSR
Trigger: ACGGGAGAACATTGACATCCAGGGCAAGACTGTGAT...GCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAGCCTGGTACACCAGGTaGCCCCGCAGGTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEAWYTR*PRRSHV
Trigger: GACGTGGGACCTGCGGGGCCACCTGGTGTACCAGGC...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACAATCGCCTTCTGGGCCTATTaGACCCCGAGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KMGSYASDGGCQKNEETIAFWAY*TPSSWR
Trigger: CCTCCAGGAGCTCGGGGTCCAATAGGCCCAGAAGGC...GATTGTTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TCTGGTCAGGGTTTTGTAGCACCAAGAGTTTCCTTAAAATGGGCAGTTACGCGTCACCCGGTGGTCCAGTaGGTCCCTGAGGCCCCAATT +
Preference number: 4 (lower is better)
Translates to: SGQGFVAPRVSLKWAVTRHPVVQ*VPEAPI
Trigger: AATTGGGGCCTCAGGGACCCACTGGACCACCGGGTG...ACGCGTAACTGCCCATTTTAAGGAAACTCTTGGTGCTACAAAACCCTGACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTGCCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATTTCCTGGAGGGCCACTaGGACCGGGGGCACCGACAT +
Preference number: 4 (lower is better)
Translates to: LPIIRETQVDGHHIHLFYFLEGH*DRGHRH
Trigger: ATGTCGGTGCCCCCGGTCCCAGTGGCCCTCCAGGAA...ATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TCCTTAAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAATCCCCTGGGACCAACTaGCCCTGGGCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLKWAVTRQMGAVRRMKKSPGTN*PWAAFF
Trigger: GAAGAAGGCAGCCCAGGGCCAGTTGGTCCCAGGGGA...TTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTTAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGGGCCCCTTGGTCCTTaGGGACCCTGTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENGPLGP*GPCGPV
Trigger: CACTGGGCCACAGGGTCCCCAAGGACCAAGGGGCCC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACAATCCTGGCCTGGAGGCCCTaGGGGTCCAACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: KMGSYASDGGCQKNEETILAWRP*GSNWSI
Trigger: AATGGACCAGTTGGACCCCCAGGGCCTCCAGGCCAG...GATTGTTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCAAATCCCGGCTGGCCTaGAGGCCCTGGGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFKSRLA*RPWGSN
Trigger: GTTGGACCCCCAGGGCCTCCAGGCCAGCCGGGATTT...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAGGGGCCGGCCCGGCCTaGAAGCCCATCTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEGAGPA*KPIFSR
Trigger: CCTGGAAAAGATGGGCTTCCAGGCCGGGCCGGCCCC...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGACCTGGCTCCCCCATaGGGCCGGCCCGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSDLAPP*GRPGLE
Trigger: TTCCAGGCCGGGCCGGCCCCATGGGGGAGCCAGGTC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGGTCCTGTCTCCCCTTaGGGGCCAGGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKGPVSP*GPGIPG
Trigger: TCCTGGGATCCCTGGCCCTCAAGGGGAGACAGGACC...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AACACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATACCCAATCTGTTCACTaGCTGGGGTGGGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: NTQGLPLQHRFSHLWPRHTQSVH*LGWEAA
Trigger: AGCGGCCTCCCACCCCAGGCAGTGAACAGATTGGGT...ATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATGGTCCTGGAGGGCCCTaGAGCCCCAGCAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNGPGGP*SPSNPG
Trigger: CCCTGGATTGCTGGGGCTGCAGGGCCCTCCAGGACC...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCGGCCTGCCAGGCCCTaGTCCCCAATTTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENRPARP*SPISPR
Trigger: TCGGGGAGAAATTGGGGAGCAGGGCCTGGCAGGCCG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAACAACTGGCCCTGGGCTaGCTTCTTCCCCCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEQLALG*LLPPLH
Trigger: GTGCAGCGGGGGAAGAAGGCAGCCCAGGGCCAGTTG...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCCTGGGTCACCACGGCTaGCAGGAGAACCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFLGHHG*QENQGS
Trigger: GGATCCCTGGTTCTCCTGGCAGCCGTGGTGACCCAG...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGGCCAGCAACCCCAATaGCTGGGTCACCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKGQQPQ*LGHHGC
Trigger: GCAGCCGTGGTGACCCAGGCATTGGGGTTGCTGGCC...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGCCCAACCTCACCATCTaGACCACGTTCTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRPNLTI*TTFSLT
Trigger: AGTCAAGGAGAACGTGGTGCAGATGGTGAGGTTGGG...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCTGGCTCTCCTGCTTTaGCCGGCTCTCCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENLALLL*PALQGD
Trigger: GTCCCCCTGGAGAGCCGGGCAAAGCAGGAGAGCCAG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCCCCAGCTCTGGTCAGTaGCCTGGCCAACTGCCCATC +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFPSSGQ*PGQLPI
Trigger: GATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGG...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTCCTGGGTACAGCAGCATGGCCTaGCAGGGAGGCACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SASLLSLDSGGVCIISPGYSSMA*QGGTQG
Trigger: CCCCTGAGTGCCTCCCTGCCAGGCCATGCTGCTGTA...CCCAGGAGAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGCGCGTCTCCCGTGTTaGTGTTGCCCCCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENARLPC*CCPRGR
Trigger: CCTACCACGGGGGCAACACCAACACGGGAGACGCGC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTCTGTGGGATGCTGTACTaGTCGATGACCTGCCAGATA +
Preference number: 4 (lower is better)
Translates to: ADSVFSKCTSRREVGTFLCGMLY*SMTCQI
Trigger: TATCTGGCAGGTCATCGACCAGTACAGCATCCCACA...GAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGGCCTGGTACACCAGGTaGCCCCGCAGGTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEAWYTR*PRRSHV
Trigger: GACGTGGGACCTGCGGGGCCACCTGGTGTACCAGGC...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCGGTTCCTGGCGGACCTaGTGGTCCATTTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCGSWRT*WSIWPV
Trigger: GACGGGCCAAATGGACCACCAGGTCCGCCAGGAACC...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGGGCATCCGTGGATGTaGTGTGAACAGGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRGHPWM*CEQGCS
Trigger: ACTACATCCCTGTTCACACCACATCCACGGATGCCC...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAATCCCTTGGCACCCGGTaGTCCAGTGGGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKSLGTR*SSGSLR
Trigger: CCTCAGGGACCCACTGGACCACCGGGTGCCAAGGGA...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCCACCTTCCTGTCCCTTaGCACCCGGTGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCHLPVP*HPVVQW
Trigger: CCACTGGACCACCGGGTGCCAAGGGACAGGAAGGTG...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCTCCCCATCTTTCCCTaGGGTGCCTCTGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENLPIFP*GASEAG
Trigger: CCCGGCCTCAGAGGCACCCCAGGGAAAGATGGGGAG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATGGGACCAACTGGCCCTaGGCTGCCTTCTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNGTNWP*AAFFPR
Trigger: GCGGGGGAAGAAGGCAGCCCAGGGCCAGTTGGTCCC...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAACACCAGGATCTCCCCTaGGACCAACTGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEHQDLP*DQLALG
Trigger: GCCCAGGGCCAGTTGGTCCCAGGGGAGATCCTGGTG...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAACTTCCCTTTTCCGGGTaGCCCAGGGAGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVELPFSG*PREPRS
Trigger: GCTCCTGGGCTCCCTGGGCCACCCGGAAAAGGGAAG...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCAGCAACCCCAATGCCTaGGTCACCACGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCSNPNA*VTTAAR
Trigger: CCTGGCAGCCGTGGTGACCCAGGCATTGGGGTTGCT...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAATCCCTTGAAGCCAGGTaGGCCTCGGGCACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKSLEAR*ASGTLW
Trigger: CCAGAGGGTGCCCGAGGCCCACCTGGCTTCAAGGGA...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCTCCTTGGGGACCCTGTaGCCCAGTGGGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCSLGTL*PSGSSV
Trigger: GACACTGGACCCACTGGGCCACAGGGTCCCCAAGGA...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAAATCCCGGCTGGCCTaGAGGCCCTGGGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEKSRLA*RPWGSN
Trigger: GTTGGACCCCCAGGGCCTCCAGGCCAGCCGGGATTT...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGAAACAAATTTCCCAGCTCTaGTCAGTGCCCTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: TNFPALVSALANCPSLGKQISQL*SVPWPT
Trigger: AGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTG...TTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGGTCCAGTGGGTCCCTaGGGCCCCAATTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKGPVGP*GPNSPG
Trigger: TCCTGGAGAATTGGGGCCTCAGGGACCCACTGGACC...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGAAAAGTTTTCTGACCCTCTaGCTTTTCCGCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TNFPALVSALANCPSLGKSFLTL*LFRKQP
Trigger: AGGCTGCTTGCGGAAAAGTCAGAGGGTCAGAAAACT...TTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCGCCTGTGTGTCCCTTaGAGCCAGGTGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSRLCVP*SQVGLG
Trigger: CCCGAGGCCCACCTGGCTTCAAGGGACACACAGGCG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp ACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATATGAGGTCTGCCTTGAGATaGCTTCATGTACGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TQGLPLQHRFSHLWPRHMRSALR*LHVRRG
Trigger: CCCCCGGCGTACATGAAGTCATCTCAAGGCAGACCT...CATATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACGGCAAAGATGCGGATaGCAGCGCGGTGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKRQRCG*QRGGLP
Trigger: CGGCAGCCCACCGCGCTGGCATCCGCATCTTTGCCG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCGCCCACGGCAAAGATaGGGATGCCAGCGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSRPRQR*GCQRGG
Trigger: CCCACCGCGCTGGCATCCGCATCTTTGCCGTGGGCG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTTCTCCAGGACGGCCCTaGAGTCCCGGTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSSPGRP*SPGSPG
Trigger: GCCTGGGGAACCGGGACTGCAGGGCCGTCCTGGAGA...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GGAAACTTGGATTTATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACACTGGGGGCCCAGGTCTaGCTTGAGATGACTTCATGT +
Preference number: 4 (lower is better)
Translates to: GNLDLLSTCSGRACRIHTLGAQV*LEMTSC
Trigger: ACATGAAGTCATCTCAAGGCAGACCTGGGCCCCCAG...TGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp TCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTCCTGGGGAGGCCAACTCCAGGTaGACCTGGGTCACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SASLLSLDSGGVCIISPGEANSR*TWVTFG
Trigger: GCCAAAGGTGACCCAGGTGCACCTGGAGTTGGCCTC...CCCAGGAGAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATGCGCGTCTCCCGTGTTaGTGTTGCCCCCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNARLPC*CCPRGR
Trigger: CCTACCACGGGGGCAACACCAACACGGGAGACGCGC...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp ACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATATGCACCATCCAGCCGGATaGAGACCTGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: TQGLPLQHRFSHLWPRHMHHPAG*RPVGCC
Trigger: ACAGCATCCCACAGGTCTCCATCCGGCTGGATGGTG...CATATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TCTTACAAGAGTACAGTACAGGACAGGCTGGGGAAAATGAATTCTTTAGATCAAAGTCCAGGTGGTCCTTaGGGCCCCCGCATGCCGACC +
Preference number: 4 (lower is better)
Translates to: SYKSTVQDRLGKMNSLDQSPGGP*GPRMPT
Trigger: GGTCGGCATGCGGGGGCCCCAAGGACCACCTGGACT...TTGATCTAAAGAATTCATTTTCCCCAGCCTGTCCTGTACTGTACTCTTGTAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR CCA 90 bp GGAAACTTGGATTTATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACATCACCTCGTTCTCCTTaGAGACCAGGAGCTCCGACA +
Preference number: 4 (lower is better)
Translates to: GNLDLLSTCSGRACRIHTSPRSP*RPGAPT
Trigger: TGTCGGAGCTCCTGGTCTCCAAGGAGAACGAGGTGA...TGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCACTTCTGTGAGCTTATCCTGGCGGACCTGGTaGTCCATTTGGCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: DPTKPLPTHRHYFTSVSLSWRTW*SIWPVL
Trigger: AAGGACGGGCCAAATGGACCACCAGGTCCGCCAGGA...TAAGCTCACAGAAGTGAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGGTTCCTGGCGGACCTaGTGGTCCATTTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKGSWRT*WSIWPV
Trigger: GACGGGCCAAATGGACCACCAGGTCCGCCAGGAACC...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGAAGCCTGGAGCCCCTaGGAGGCCTGCTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKEAWSP*EACFSL
Trigger: AAGGGAGAAGCAGGCCTCCCAGGGGCTCCAGGCTTC...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAACACCCGGTGGTCCAGTaGGTCCCTGAGGCCCCAATT +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKHPVVQ*VPEAPI
Trigger: AATTGGGGCCTCAGGGACCCACTGGACCACCGGGTG...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGGGACCAACTGGCCCTaGGCTGCCTTCTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSGTNWP*AAFFPR
Trigger: GCGGGGGAAGAAGGCAGCCCAGGGCCAGTTGGTCCC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTCCCCTGGGACCAACTaGCCCTGGGCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENSPGTN*PWAAFF
Trigger: GAAGAAGGCAGCCCAGGGCCAGTTGGTCCCAGGGGA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp TCCTTAAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAATTCCGCAAGCAGCCTTaGTTCCTAGGGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLKWAVTRQMGAVRRMKKFRKQP*FLGVQG
Trigger: TCCCTGGACCCCTAGGAACCAAGGCTGCTTGCGGAA...TTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAGCAACCCCAATGCCTaGGTCACCACGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENSNPNA*VTTAAR
Trigger: CCTGGCAGCCGTGGTGACCCAGGCATTGGGGTTGCT...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTCCTTGGGGACCCTGTaGCCCAGTGGGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENSLGTL*PSGSSV
Trigger: GACACTGGACCCACTGGGCCACAGGGTCCCCAAGGA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCCTGGAAATCCCGGCTaGCCTGGAGGCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSPGNPG*PGGPGG
Trigger: ACCCCCAGGGCCTCCAGGCCAGCCGGGATTTCCAGG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACAATCCTCCTCGCTCACCTTTaGGACCTATGGGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KMGSYASDGGCQKNEETILLAHL*DLWVQR
Trigger: CCTCTGGACCCATAGGTCCCAAAGGTGAGCGAGGAG...GATTGTTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTGCCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATGCCAGGATGTCCAGCTaGTCCTGTCTCCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LPIIRETQVDGHHIHLFYARMSS*SCLPLR
Trigger: CCTCAAGGGGAGACAGGACCAGCTGGACATCCTGGC...ATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTGGGAAGGGTCACATTaGCCTGGGGGACCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENWEGSH*PGGPGG
Trigger: ACCTCCCGGTCCCCCAGGCCAATGTGACCCTTCCCA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTTGTATTATTTCTCCTaGGTGATCTCCGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: GLILCFPNARPVGRWEHSLYYFS*VISGHD
Trigger: GTCATGCCCGGAGATCACCCAGGAGAAATAATACAA...GGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR CAA 72 bp CTGTTCAGGCAGGGCATGTCGCATACACACATGCACTaGATGCCATTTATTTCAGAGACAGAGCCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LFRQGMSHTHMH*MPFISETEPPW
Trigger: CCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAGTGCATGTGTGTATGCGACATGCCCTGCCTGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTAGAAGCTGCGGGCCGTaGTGTAGCGGAGCGCGTCTC +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSRSCGP*CSGARL
Trigger: GAGACGCGCTCCGCTACATCACGGCCCGCAGCTTCT...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCGCCTTCTTTCCCAGGTaGCCCTTGGATTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFAFFPR*PLDSWW
Trigger: CCACCAGGAATCCAAGGGTCACCTGGGAAAGAAGGC...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCCTGGTAACCCTTCCTaGCCAGGAAGCCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENPGNPS*PGSPMA
Trigger: TGCCATGGGGCTTCCTGGTCAGGAAGGGTTACCAGG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTCCTGGAGATCCCGGTaGTCCATTCTTGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENSWRSR*SILARW
Trigger: CCACCGGGCAAGAATGGATCACCGGGATCTCCAGGA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGCTTCCCACTGGGCTCTaGGTTCAAGTTTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRLPTGL*VQVSEI
Trigger: GATTTCTGAAACTTGAACTCAGAGCCCAGTGGGAAG...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAGACACTTTTGCAACCTaGCCGCTGAGCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEDTFAT*PLSLAA
Trigger: GGCTGCCAGGCTCAGCGGGCAGGTTGCAAAAGTGTC...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGACACTTTTGCAACCTaGCCGCTGAGCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENDTFAT*PLSLAA
Trigger: GGCTGCCAGGCTCAGCGGGCAGGTTGCAAAAGTGTC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATCTCCCGTGTTGGTGTTaGCCCCGTGGTAGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNLPCWC*PRGRRD
Trigger: GTCTCGCCTACCACGGGGGCAACACCAACACGGGAG...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACAGCTCCTCCTTGAGTaGCTCGCCCACGCCCACGGC +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKQLLLE*LAHAHG
Trigger: GCCGTGGGCGTGGGCGAGGCACTCAAGGAGGAGCTG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp CTTGATGCCATTTATTTCAGAGACAGAGCCGCCTTGGAGATACAAATTTCCCAGAGCGCACAGTCAATGTaGAGGGAGACGTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LDAIYFRDRAALEIQISQSAQSM*RETFWA
Trigger: GGCCCAGAACGTCTCCCTGCACATTGACTGTGCGCT...CTGGGAAATTTGTATCTCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATCCCCTCTCATGCCTTTaGTGCCGTCTCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNPLSCL*CRLSQG
Trigger: CCCCTGGGAGAGACGGCAGCAAAGGCATGAGAGGGG...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCTCCAGGTCGGCCTaGCAGGCCCTGCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSLSRSA*QALLPN
Trigger: ATTGGGGAGCAGGGCCTGGCAGGCCGACCTGGAGAG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGACCGGGGTTTCCAGCTaGTCCAGGAGCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKETGVSS*SRSPMC
Trigger: GCACATGGGGCTCCTGGAGCAGCTGGAAACCCCGGT...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTTCCCCGGGGACCGGGTaGACCAGAATCGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSSPGTG*TRIACV
Trigger: CACACAGGCGATTCTGGTGCACCCGGTCCCCGGGGA...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAACAGGGACCCCCTCCTTaGCTGGGACTCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEQGPPP*LGLLSL
Trigger: GAGAGAAAGGAGTCCCAGGCAAGGAGGGGGTCCCTG...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCAGGGACCCCCTCCTTaGCTGGGACTCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENQGPPP*LGLLSL
Trigger: GAGAGAAAGGAGTCCCAGGCAAGGAGGGGGTCCCTG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTCGTTTCAGAAATCCACTaGAGTCTTCTGGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ADSVFSKCTSRREVGTFLVSEIH*SLLAFQ
Trigger: CTGGAAAGCCAGAAGACTGCAGTGGATTTCTGAAAC...GAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AACACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATGGGACAGGCTTCTCTTaGCCAGGAAGAGACGCTGTT +
Preference number: 4 (lower is better)
Translates to: NTQGLPLQHRFSHLWPRHGTGFS*PGRDAV
Trigger: AACAGCGTCTCTTCCTGGCCAAGAGAAGCCTGTCCC...ATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCCAACTCGAAGGCCGTaGTGGGCCGGTCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSPTRRP*WAGRCS
Trigger: GCTACAGCGACCGGCCCACCACGGCCTTCGAGTTGG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATTGCAGGGAGACGTTCTaGGCCTGGATGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNCRETF*AWMLRA
Trigger: GGCCCTGAGCATCCAGGCCCAGAACGTCTCCCTGCA...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAGACCAGGGAGCCCCATaGGGCCAGCAACTCCCATTT +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEDQGAP*GQQLPF
Trigger: AAATGGGAGTTGCTGGCCCCATGGGGCTCCCTGGTC...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTCCTGGGCGCCAACCGGCCCAATaGCTCCTATGTCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SASLLSLDSGGVCIISPGRQPAQ*LLCLPL
Trigger: CAAAGGGAGACATAGGAGCCATTGGGCCGGTTGGCG...CCCAGGAGAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TCCTTAAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAATTCTCCGGGCATCCGTaGATGTGGTGTGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: SLKWAVTRQMGAVRRMKKFSGHP*MWCEQG
Trigger: TCCCTGTTCACACCACATCCACGGATGCCCGGAGAA...TTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAATCCTTTGTCTCCTGGTaGTCCGGAAGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVESFVSW*SGRARR
Trigger: CCTCCTGGCCCTTCCGGACCACCAGGAGACAAAGGA...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGGATCCTTTGTCTCCTaGTGGTCCGGAAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENGSFVS*WSGRAR
Trigger: CCTGGCCCTTCCGGACCACCAGGAGACAAAGGATCC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTTCTCCTGGATTTCCTaGTGCACCGTCCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEFSWIS*CTVPAG
Trigger: GCCGGCCGGGACGGTGCACCAGGAAATCCAGGAGAA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAATTCCATCTGCCCCTaGTGGCCCAGGGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENNSICP*WPRVPW
Trigger: CCAGGGAACCCTGGGCCACCAGGGGCAGATGGAATT...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp TCCTTAAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAATTCCCAGGTGACCCTTaGATTCCTGGTGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLKWAVTRQMGAVRRMKKFPGDP*IPGGPA
Trigger: TGCTGGACCACCAGGAATCCAAGGGTCACCTGGGAA...TTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCGACCCTGTGGCCCAGTaGGTCCAGTGTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFDPVAQ*VQCHHL
Trigger: AAGATGGTGACACTGGACCCACTGGGCCACAGGGTC...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAGACTCCTTTCTCTCCTaGTTCTCCCGGAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEDSFLS*FSRRPT
Trigger: CGTGGGCCTCCGGGAGAACCAGGAGAGAAAGGAGTC...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTCCCCAGGTAGTCCTTaGGGACCCATCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENSPGSP*GPIRPV
Trigger: CACAGGCCTGATGGGTCCCCAAGGACTACCTGGGGA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGCTGGCCTGGAGGCCCTaGGGGTCCAACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKELAWRP*GSNWSI
Trigger: AATGGACCAGTTGGACCCCCAGGGCCTCCAGGCCAG...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACAATCCACCTTTGGGACCTATaGGTCCAGAGGGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KMGSYASDGGCQKNEETIHLWDL*VQRVLP
Trigger: TGGAAGGACCCTCTGGACCCATAGGTCCCAAAGGTG...GATTGTTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAATTCCCCGGGTTGACCTaGGATTCCAGGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEFPGLT*DSRGSH
Trigger: ATGGGACCCCCTGGAATCCCAGGTCAACCCGGGGAA...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp ACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTCTCTGGACAGTGGTaGTGTTTGTATTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: TEPPWRYKFPSSGQCPGQLSGQW*CLYYFS
Trigger: GGAGAAATAATACAAACACCACCACTGTCCAGAGAG...TTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCACTTCTGTGAGCTTACGTCCCGTCGGGAGGTaGGAACATTCCTCATGGTTG +
Preference number: 4 (lower is better)
Translates to: DPTKPLPTHRHYFTSVSLRPVGR*EHSSWL
Trigger: CAACCATGAGGAATGTTCCCACCTCCCGACGGGACG...TAAGCTCACAGAAGTGAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAACTCCTCGATCCCCCTTaGTTCCTAGGGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVELLDPP*FLGVQG
Trigger: TCCCTGGACCCCTAGGAACCAAGGGGGATCGAGGAG...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435777.2
CDS-3UTR TCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGTCAGGTCAAAACCTGTaGTTTCCTTGGTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRSGQNL*FPWFLH
Trigger: ATGGAGGAACCAAGGAAATCACAGGTTTTGACCTGA...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGCTCTTGCTGCACCACTaGGCCTGGTACACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKELLLHH*AWYTRW
Trigger: CCACCTGGTGTACCAGGCTCAGTGGTGCAGCAAGAG...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAGCACCACGTTCTCCTTaGCTTCCCTGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEAPRSP*LPCGPA
Trigger: AGCTGGACCACAGGGAAGTCAAGGAGAACGTGGTGC...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTCCTGGAGATCCCGGTaGTCCATTCTTGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKESWRSR*SILARW
Trigger: CCACCGGGCAAGAATGGATCACCGGGATCTCCAGGA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGGCCCAGGTCTGCCTTaGGATGACTTCATGTACGCC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENGPGLP*DDFMYA
Trigger: GGCGTACATGAAGTCATCTCAAGGCAGACCTGGGCC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACCAGGTTCCCCGGGTTaGCCTGGGATTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKPGSPG*PGIPGG
Trigger: ACCCCCTGGAATCCCAGGTCAACCCGGGGAACCTGG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGCCTTGACCTCCTCCTaGGAGCCAAAGAGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENALTSS*EPKSPN
Trigger: GTTGGGACTCTTTGGCTCGCAGGAGGAGGTCAAGGC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACTCCCGTGTTGGTGTTaGCCCCGTGGTAGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKLPCWC*PRGRRD
Trigger: GTCTCGCCTACCACGGGGGCAACACCAACACGGGAG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAACAGGAGGTCCATCCCTaGCTTCTGGGCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEQEVHP*LLGLLD
Trigger: GTCCAATAGGCCCAGAAGGCAGGGATGGACCTCCTG...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACGGCCTGCCAGGCCCTaGTCCCCAATTTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKRPARP*SPISPR
Trigger: TCGGGGAGAAATTGGGGAGCAGGGCCTGGCAGGCCG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTGGGTCACCACGGCTaGCAGGAGAACCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSLGHHG*QENQGS
Trigger: GGATCCCTGGTTCTCCTGGCAGCCGTGGTGACCCAG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGTCATCAGGTAAACCTTaGGGGAACACATCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRSSGKP*GNTSSV
Trigger: TACTGAGGATGTGTTCCCCCAAGGTTTACCTGATGA...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCACCATCCAGCCGGATaGAGACCTGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENHHPAG*RPVGCC
Trigger: ACAGCATCCCACAGGTCTCCATCCGGCTGGATGGTG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGCCTTCTGGGCCTATTaGACCCCGAGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSAFWAY*TPSSWR
Trigger: CCTCCAGGAGCTCGGGGTCCAATAGGCCCAGAAGGC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTCCATCCCTGCCTTCTaGGCCTATTGGACCCCGAGC +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKESIPAF*AYWTPS
Trigger: GCTCGGGGTCCAATAGGCCCAGAAGGCAGGGATGGA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CTGCCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATTTCTCCCCGAAGGCCTaGTTTTCCAGGCAGACCATC +
Preference number: 4 (lower is better)
Translates to: LPIIRETQVDGHHIHLFYFSPKA*FSRQTI
Trigger: GATGGTCTGCCTGGAAAACCAGGCCTTCGGGGAGAA...ATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGAAGCCTGGAGCCCCTaGGAGGCCTGCTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSEAWSP*EACFSL
Trigger: AAGGGAGAAGCAGGCCTCCCAGGGGCTCCAGGCTTC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATTCCTGGAGGGCCACTaGGACCGGGGGCACCGACAT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKFLEGH*DRGHRH
Trigger: ATGTCGGTGCCCCCGGTCCCAGTGGCCCTCCAGGAA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACACCAGGATCTCCCCTaGGACCAACTGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKHQDLP*DQLALG
Trigger: GCCCAGGGCCAGTTGGTCCCAGGGGAGATCCTGGTG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAATCCATTCTTGCCCGGTaGGCCCCTTGGTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKSILAR*APWSLG
Trigger: CCCCAAGGACCAAGGGGCCCACCGGGCAAGAATGGA...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGCCTGTGTGGCCTTTGTaGCCTGGGATTCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEPVWPL*PGIPGS
Trigger: GGACCCTGGAATCCCAGGCCACAAAGGCCACACAGG...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTCCCCAGGTAGTCCTTaGGGACCCATCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKESPGSP*GPIRPV
Trigger: CACAGGCCTGATGGGTCCCCAAGGACTACCTGGGGA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAAGGGTCACATTGGCCTaGGGGACCGGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKRVTLA*GTGRSW
Trigger: CCAGGACCTCCCGGTCCCCCAGGCCAATGTGACCCT...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAGCCGGGCAGCAAGGCTaGCGAAGTAGGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKAGQQG*RSRHTG
Trigger: CCCAGTGTGCCTACTTCGCCAGCCTTGCTGCCCGGC...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTCACCCTTTTCTCCCTaGGGTCCTGCCACAGCGTTG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENSPFSP*GPATAL
Trigger: CAACGCTGTGGCAGGACCCCAGGGAGAAAAGGGTGA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435777.2
CDS-3UTR TCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACCTGGTAACCCTTCCTaGCCAGGAAGCCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKPGNPS*PGSPMA
Trigger: TGCCATGGGGCTTCCTGGTCAGGAAGGGTTACCAGG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp AAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACAATCGTCCTTTGTCACCTTTaGTCCCAGGATCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: KMGSYASDGGCQKNEETIVLCHL*SQDLPF
Trigger: AAAGGGGAGATCCTGGGATCAAAGGTGACAAAGGAC...GATTGTTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCGTAGTGGACACTTTTaGAACCTGCCCGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENRSGHF*NLPAEP
Trigger: AGGCTCAGCGGGCAGGTTGCAAAAGTGTCCACTACG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCTCGATGGGTAGTGTCTaGACCAGCGCACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFSMGSV*TSAQSM
Trigger: CATTGACTGTGCGCTGGTGCAGACACTACCCATCGA...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATCAGGAGGTCCATCCCTaGCTTCTGGGCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNQEVHP*LLGLLD
Trigger: GTCCAATAGGCCCAGAAGGCAGGGATGGACCTCCTG...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTCCTGCAATTCCATCTaGCCCTGGTGGCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKESCNSI*PWWPRV
Trigger: AACCCTGGGCCACCAGGGGCAGATGGAATTGCAGGA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGTCCAGCAGCTCCTaGAATTCCATCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEWSSSS*NSICPW
Trigger: CCAGGGGCAGATGGAATTGCAGGAGCTGCTGGACCA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp TCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTCCTGGGTGCCATTTTCCCCTTTaGTTCCTTTCTGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SASLLSLDSGGVCIISPGCHFPL*FLSGQG
Trigger: CCCCTGGCCAGAAAGGAAGCAAAGGGGAAAATGGCA...CCCAGGAGAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCTGGGGGCCCAGGTCTaGCTTGAGATGACTTCATGT +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENLGAQV*LEMTSC
Trigger: ACATGAAGTCATCTCAAGGCAGACCTGGGCCCCCAG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAGAGGCCAACTCCAGGTaGACCTGGGTCACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKEANSR*TWVTFG
Trigger: GCCAAAGGTGACCCAGGTGCACCTGGAGTTGGCCTC...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp ACCCTGCTTCTTGATGTGAGAAAGGGGTCCCAGGAATATGCATTTAAACTTGTTCCCTGCCCAGACAAGTaGCTTCACTTACAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLLLDVRKGSQEYAFKLVPCPDK*LHLQEL
Trigger: GAGCTCCTGTAAGTGAAGGCACTTGTCTGGGCAGGG...AACAAGTTTAAATGCATATTCCTGGGACCCCTTTCTCACATCAAGAAGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAACCGGATGGAGACCTGTaGGATGCTGTACTGGTCGAT +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEPDGDL*DAVLVD
Trigger: ATCGACCAGTACAGCATCCCACAGGTCTCCATCCGG...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTCTCCCGTTCCTCGATaGGTAGTGTCTGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKESPVPR*VVSAPA
Trigger: CGCTGGTGCAGACACTACCCATCGAGGAACGGGAGA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATGTGACCTCTGGGTCCTaGAGCTCCCTGTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNVTSGS*SSLFPF
Trigger: AAAGGGGAACAGGGAGCTCCAGGACCCAGAGGTCAC...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACAATCTCCAGGGATTCCAGGTaGTCCCATGTCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KMGSYASDGGCQKNEETISRDSR*SHVTFL
Trigger: AAGAAAGGTGACATGGGACCACCTGGAATCCCTGGA...GATTGTTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACCTGGTGGTCCATTTaGCCCGTCCTTTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKTWWSI*PVLSRG
Trigger: CCCCCTGGAAAGGACGGGCCAAATGGACCACCAGGT...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAATTCTCCCTTGGTTCCTaGCGGACCTGGTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKFSLGS*RTWWSI
Trigger: AATGGACCACCAGGTCCGCCAGGAACCAAGGGAGAA...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAATTCTCCCTTGGTTCCTaGCGGACCTGGTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEFSLGS*RTWWSI
Trigger: AATGGACCACCAGGTCCGCCAGGAACCAAGGGAGAA...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACTCCTGGTTCTCCCTTaGTTCCTGGCGGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKLLVLP*FLADLV
Trigger: CACCAGGTCCGCCAGGAACCAAGGGAGAACCAGGAG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACACCTTCCTGTCCCTTaGCACCCGGTGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKHLPVP*HPVVQW
Trigger: CCACTGGACCACCGGGTGCCAAGGGACAGGAAGGTG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp TTCTCTTTCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCAATTCCATCTGCCCCTaGTGGCCCAGGGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FSFCFFTLSGQWWCLYYFNSICP*WPRVPW
Trigger: CCAGGGAACCCTGGGCCACCAGGGGCAGATGGAATT...GAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGAAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTTCCCAGGTGACCCTTaGATTCCTGGTGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENFPGDP*IPGGPA
Trigger: TGCTGGACCACCAGGAATCCAAGGGTCACCTGGGAA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAGACTCCTTTCTCTCCTaGTTCTCCCGGAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKDSFLS*FSRRPT
Trigger: CGTGGGCCTCCGGGAGAACCAGGAGAGAAAGGAGTC...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGCCAGGATGTCCAGCTaGTCCTGTCTCCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSARMSS*SCLPLR
Trigger: CCTCAAGGGGAGACAGGACCAGCTGGACATCCTGGC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATCCCTGGGGGCCCCATaGAACCTGGAACTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKSLGAP*NLELQD
Trigger: ATCCTGGAGTTCCAGGTTTCATGGGGCCCCCAGGGA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAATTCCCCAGCTCTTCTTaGATAAGCCGACGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEFPSSS*ISRRRV
Trigger: AACCCTGCGTCGGCTTATTCAAGAAGAGCTGGGGAA...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGGTGATCTCCGGGCATaGCTGAGAATGAAGCCCATT +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENGDLRA*LRMKPI
Trigger: AATGGGCTTCATTCTCAGTCATGCCCGGAGATCACC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp CTGCCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATATTATTTCTCCTGGGTaGTCTCCGGGCATGACTGAG +
Preference number: 4 (lower is better)
Translates to: LPIIRETQVDGHHIHLFYIISPG*SPGMTE
Trigger: CTCAGTCATGCCCGGAGATCACCCAGGAGAAATAAT...ATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp TCTGGTCAGGGTTTTGTAGCACCAAGAGTTTCCTTAAAATGGGCAGTTACGCGTTACTGGTCGATGACCTaGCAGATATACCAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGQGFVAPRVSLKWAVTRYWSMT*QIYQSS
Trigger: GGAAGACTGGTATATCTGGCAGGTCATCGACCAGTA...ACGCGTAACTGCCCATTTTAAGGAAACTCTTGGTGCTACAAAACCCTGACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GGAAACTTGGATTTATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACATGCCAATCACAGTCTTaGCCTGGATGTCAATGTTCT +
Preference number: 4 (lower is better)
Translates to: GNLDLLSTCSGRACRIHTCQSQS*PGCQCS
Trigger: AGAACATTGACATCCAGGGCAAGACTGTGATTGGCA...TGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTGTCGTAGAGGCGCTTaGCAATCACAGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENCRRGA*QSQSCP
Trigger: AGGGCAAGACTGTGATTGGCAAGCGCCTCTACGACA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTTCCCTCGGAGACCTTaGAAACCAGGAGGTCCATCC +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEFPRRP*KPGGPS
Trigger: GGATGGACCTCCTGGTTTGCAAGGTCTCCGAGGGAA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATCCAGGAGCCCCATGTaGACCTTCCTGTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKSRSPM*TFLSLG
Trigger: GCCAAGGGACAGGAAGGTGCACATGGGGCTCCTGGA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTGCCATTTTCCCCTTTaGTTCCTTTCTGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENCHFPL*FLSGQG
Trigger: CCCCTGGCCAGAAAGGAAGCAAAGGGGAAAATGGCA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGTGCCCTGGCCAACTaGCCATCATTAGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVESALAN*PSLGKH
Trigger: GTGTTTCCCTAATGATGGGCAGTTGGCCAGGGCACT...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTTGATGCCATTTATTTCAGAGACAGAGCCGCCTTGGAGATACAAATTTCCCAGGTAGGTCAAAGTCAATaGGCACACTGTCGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LDAIYFRDRAALEIQISQVGQSQ*AHCRRG
Trigger: GCCTCTACGACAGTGTGCCCATTGACTTTGACCTAC...CTGGGAAATTTGTATCTCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATCCATCCCTGCCTTCTaGGCCTATTGGACCCCGAGC +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKSIPAF*AYWTPS
Trigger: GCTCGGGGTCCAATAGGCCCAGAAGGCAGGGATGGA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATCCTGGCGGACCTGGTaGTCCATTTGGCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKSWRTW*SIWPVL
Trigger: AAGGACGGGCCAAATGGACCACCAGGTCCGCCAGGA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACTCCTGGTTCTCCCTTaGTTCCTGGCGGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKLLVLP*FLADLV
Trigger: CACCAGGTCCGCCAGGAACCAAGGGAGAACCAGGAG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp TCCTTAAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAAGTCACCTTTCAGTCCTaGAAGTCCCAGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: SLKWAVTRQMGAVRRMKKVTFQS*KSQFTF
Trigger: AAAGGTGAACTGGGACTTCCAGGACTGAAAGGTGAC...TTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTTCTCCGGGCATCCGTaGATGTGGTGTGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEFSGHP*MWCEQG
Trigger: TCCCTGTTCACACCACATCCACGGATGCCCGGAGAA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp TTCTCTTTCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCGGGCCCCATGAAACCTaGAACTCCAGGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: FSFCFFTLSGQWWCLYYFGPHET*NSRMTL
Trigger: CAGGGTCATCCTGGAGTTCCAGGTTTCATGGGGCCC...GAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGAAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAGACCCTGTGGCCCAGTaGGTCCAGTGTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKDPVAQ*VQCHHL
Trigger: AAGATGGTGACACTGGACCCACTGGGCCACAGGGTC...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACTCCTCGCTCACCTTTaGGACCTATGGGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKLLAHL*DLWVQR
Trigger: CCTCTGGACCCATAGGTCCCAAAGGTGAGCGAGGAG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAACCTCTGGCTTCCCACTaGGCTCTGAGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKPLASH*ALSSSF
Trigger: GAAACTTGAACTCAGAGCCCAGTGGGAAGCCAGAGG...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCCTCTGGCTTCCCACTaGGCTCTGAGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENPLASH*ALSSSF
Trigger: GAAACTTGAACTCAGAGCCCAGTGGGAAGCCAGAGG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTTAGAGCACTGAGGTaGCTGGAGTGCACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSLRALR*LECTLR
Trigger: CCTCAGGGTGCACTCCAGCCACCTCAGTGCTCTAAG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
3UTR CAA 72 bp TTCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTaGTATTATTTCTCCTGGGTGATCTCCGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: FCFFTLSGQWWC*YYFSWVISGHD
Trigger: GTCATGCCCGGAGATCACCCAGGAGAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAGCCTTCTTTCCCAGGTaGCCCTTGGATTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKAFFPR*PLDSWW
Trigger: CCACCAGGAATCCAAGGGTCACCTGGGAAAGAAGGC...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp TTCTCTTTCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCCTCCCCTTTCTCCTTTaGATCCAGGCTCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FSFCFFTLSGQWWCLYYFLPFLL*IQALQA
Trigger: AGCCTGGAGAGCCTGGATTCAAAGGAGAAAGGGGAG...GAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGAAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGTCCTTTGTCACCTTTaGTCCCAGGATCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENVLCHL*SQDLPF
Trigger: AAAGGGGAGATCCTGGGATCAAAGGTGACAAAGGAC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTTCCCCAGCTCTTCTTaGATAAGCCGACGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEFPSSS*ISRRRV
Trigger: AACCCTGCGTCGGCTTATTCAAGAAGAGCTGGGGAA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAAGGTCTGCCTTGAGATaGCTTCATGTACGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKRSALR*LHVRRG
Trigger: CCCCCGGCGTACATGAAGTCATCTCAAGGCAGACCT...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp CTTTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTTTGGCCAAGACATATaGTCCCACAAAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: LWPRHMIPQSHCQPTDIIFGQDI*SHKAIA
Trigger: GGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAA...AATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCCCAACAAGAGGAACTTaGAGGGGCCTTACACAGTTT +
Preference number: 4 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCPTRGT*RGLTQF
Trigger: AAACTGTGTAAGGCCCCTTCAAGTTCCTCTTGTTGG...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp TTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCGAAACTTGGATTTATTaGGCACCTGTTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LAKTYDPTKPLPTHRHYFETWIY*APVQAG
Trigger: CCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTC...GAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCGTAGTGGACACTTTTaGAACCTGCCCGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSRSGHF*NLPAEP
Trigger: AGGCTCAGCGGGCAGGTTGCAAAAGTGTCCACTACG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAACATCCTCAGTACTTTaGACCACAGGGAAGGATCCC +
Preference number: 4 (lower is better)
Translates to: RNNLLPHESSFPNFKGVETSSVL*TTGKDP
Trigger: GGGATCCTTCCCTGTGGTGCAAAGTACTGAGGATGT...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCAGCGTTGTACTCGACTaGCTTGTTTTCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCSVVLD*LVFTIQ
Trigger: CTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCT...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATCCTGCAATTCCATCTaGCCCTGGTGGCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKSCNSI*PWWPRV
Trigger: AACCCTGGGCCACCAGGGGCAGATGGAATTGCAGGA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAACATCTCTGCCCTCTTTaGCTTCTTCTCCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKHLCPL*LLLLGF
Trigger: GAATCCCAGGAGAAGAAGGCAAAGAGGGCAGAGATG...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AGACTCCACCCTTCTTACAAGAGTACAGTACAGGACAGGCTGGGGAAAATGAATGCATTACTGTCTAGATaGAGGTGGAGGAACTTGCTA +
Preference number: 4 (lower is better)
Translates to: RLHPSYKSTVQDRLGKMNALLSR*RWRNLL
Trigger: TAGCAAGTTCCTCCACCTGCATCTAGACAGTAATGC...ATTCATTTTCCCCAGCCTGTCCTGTACTGTACTCTTGTAAGAAGGGTGGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAAGGAACAAAGCTGTCTaGAGCCTCCCCAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKRNKAV*SLPRGK
Trigger: CTTGCCCCTGGGGAGGCTCCAGACAGCTTTGTTCCT...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACCGGATGGAGACCTGTaGGATGCTGTACTGGTCGAT +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKPDGDL*DAVLVD
Trigger: ATCGACCAGTACAGCATCCCACAGGTCTCCATCCGG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAGTGACCTCTGGGTCCTaGAGCTCCCTGTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKVTSGS*SSLFPF
Trigger: AAAGGGGAACAGGGAGCTCCAGGACCCAGAGGTCAC...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGGGGCATCCGTGGATGTaGTGTGAACAGGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEGHPWM*CEQGCS
Trigger: ACTACATCCCTGTTCACACCACATCCACGGATGCCC...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAGGCCCTCTTTCTCCTaGATTTCCTGGTGCACCGTC +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKRPSFS*ISWCTV
Trigger: GACGGTGCACCAGGAAATCCAGGAGAAAGAGGGCCT...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATTGTGCCTTCTCTCCCTaGCTTTCCTGGGACACCTTT +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNCAFSP*LSWDTF
Trigger: AAAGGTGTCCCAGGAAAGCCAGGGAGAGAAGGCACA...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAGGGCCCCATGAAACCTaGAACTCCAGGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKGPHET*NSRMTL
Trigger: CAGGGTCATCCTGGAGTTCCAGGTTTCATGGGGCCC...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCCTTTGCTTCCTTTCTaGCCAGGGGTTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSPLLPF*PGVPEG
Trigger: CCCTTCAGGAACCCCTGGCCAGAAAGGAAGCAAAGG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
3UTR CAA 72 bp CCATCTTTGGCCAAGACATATGATCCCACAAAGCCATaGCCAACCCACAGACATTATTTCACTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PSLAKTYDPTKP*PTHRHYFTSVS
Trigger: GCTCACAGAAGTGAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGCTGTACTGGTCGATaGCCTGCCAGATATACCAGT +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKECCTGR*PARYTS
Trigger: ACTGGTATATCTGGCAGGTCATCGACCAGTACAGCA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACTCCCCTTTCTCCTTTaGATCCAGGCTCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKLPFLL*IQALQA
Trigger: AGCCTGGAGAGCCTGGATTCAAAGGAGAAAGGGGAG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATACATCCTCAGTACTTTaGACCACAGGGAAGGATCCC +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNTSSVL*TTGKDP
Trigger: GGGATCCTTCCCTGTGGTGCAAAGTACTGAGGATGT...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp TCTGGTCAGGGTTTTGTAGCACCAAGAGTTTCCTTAAAATGGGCAGTTACGCGTACAAGTCTCCAATTCTaGGTGTCTCGAGTCACAATA +
Preference number: 4 (lower is better)
Translates to: SGQGFVAPRVSLKWAVTRTSLQF*VSRVTI
Trigger: TATTGTGACTCGAGACACGCAGAATTGGAGACTTGT...ACGCGTAACTGCCCATTTTAAGGAAACTCTTGGTGCTACAAAACCCTGACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACCTTTCAAGCCCTCTTaGTGCACCACTGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKPFKPS*CTTEPG
Trigger: ACCAGGCTCAGTGGTGCAGCAAGAGGGCTTGAAAGG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATTCCCCCTTAACACATTaGCCTCCCAGTGCACAGTTT +
Preference number: 4 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNSPLTH*PPSAQF
Trigger: AAACTGTGCACTGGGAGGGCAATGTGTTAAGGGGGA...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACCCAACCTCACCATCTaGACCACGTTCTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKPNLTI*TTFSLT
Trigger: AGTCAAGGAGAACGTGGTGCAGATGGTGAGGTTGGG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATTCTCCCCGAAGGCCTaGTTTTCCAGGCAGACCATC +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKFSPKA*FSRQTI
Trigger: GATGGTCTGCCTGGAAAACCAGGCCTTCGGGGAGAA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTTGTGCCTTCTCTCCCTaGCTTTCCTGGGACACCTTT +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSCAFSP*LSWDTF
Trigger: AAAGGTGTCCCAGGAAAGCCAGGGAGAGAAGGCACA...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATCCTTGACTTCCCTGTaGTCCAGCTATTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKSLTSL*SSYSWG
Trigger: CCCCCAGGAATAGCTGGACCACAGGGAAGTCAAGGA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACCTTTGCTTCCTTTCTaGCCAGGGGTTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKPLLPF*PGVPEG
Trigger: CCCTTCAGGAACCCCTGGCCAGAAAGGAAGCAAAGG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGAAGCCAGGAAGTCCTaGGCTGCCATTTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSEARKS*AAIFPF
Trigger: AAAGGGGAAAATGGCAGCCCAGGACTTCCTGGCTTC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAGAAGCCAGGAAGTCCTaGGCTGCCATTTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKEARKS*AAIFPF
Trigger: AAAGGGGAAAATGGCAGCCCAGGACTTCCTGGCTTC...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACACCTTTGGGACCTATaGGTCCAGAGGGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKHLWDL*VQRVLP
Trigger: TGGAAGGACCCTCTGGACCCATAGGTCCCAAAGGTG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGGGCTGTCAGAAGAATaGAGAAACAATCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSGLSEE*RNNLLP
Trigger: GGGCAGGAGATTGTTTCTTCATTCTTCTGACAGCCC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTACTGGTCGATGACCTaGCAGATATACCAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEYWSMT*QIYQSS
Trigger: GGAAGACTGGTATATCTGGCAGGTCATCGACCAGTA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCACTTCTGTGAGCTTAATCCCACAAAGCCATTaGCAACCCACAGACATTATT +
Preference number: 4 (lower is better)
Translates to: DPTKPLPTHRHYFTSVSLIPQSH*QPTDII
Trigger: AATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGAT...TAAGCTCACAGAAGTGAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATTCATCAGGTAAACCTTaGGGGAACACATCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENSSGKP*GNTSSV
Trigger: TACTGAGGATGTGTTCCCCCAAGGTTTACCTGATGA...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAATGTGGGATGCTGTACTaGTCGATGACCTGCCAGATA +
Preference number: 4 (lower is better)
Translates to: RPAASVGFNNFEVSQENKCGMLY*SMTCQI
Trigger: TATCTGGCAGGTCATCGACCAGTACAGCATCCCACA...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGGTCACCTTTCAGTCCTaGAAGTCCCAGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEVTFQS*KSQFTF
Trigger: AAAGGTGAACTGGGACTTCCAGGACTGAAAGGTGAC...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATCTCCCTGGCTTTCCTaGGACACCTTTGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKSPWLS*DTFVPF
Trigger: AAAGGGGACAAAGGTGTCCCAGGAAAGCCAGGGAGA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCAGAGTTTCCTTAAAATaGGCAGTTACGCGTCAGATG +
Preference number: 4 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCRVSLK*AVTRQM
Trigger: CATCTGACGCGTAACTGCCCATTTTAAGGAAACTCT...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCGAGAGGGAACCAGCTTaGAAACAAGTAACTAAATAC +
Preference number: 4 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCEREPA*KQVTKY
Trigger: GTATTTAGTTACTTGTTTTCAAGCTGGTTCCCTCTC...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR TCA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGAAAGGAACACATGGCTaGAGTCTTTCAAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: NEETISCPTNQVFPTLKEKGTHG*SLSRPL
Trigger: CAGAGGTCTTGAAAGACTTCAGCCATGTGTTCCTTT...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAGTGCACCCTGAGGGCTaGTTCTGTGTTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKVHPEG*FCVFQM
Trigger: CATTTGGAAAACACAGAATCAGCCCTCAGGGTGCAC...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTAGCGTTGTACTCGACTaGCTTGTTTTCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSSVVLD*LVFTIQ
Trigger: CTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCT...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACATCTCTGCCCTCTTTaGCTTCTTCTCCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKHLCPL*LLLLGF
Trigger: GAATCCCAGGAGAAGAAGGCAAAGAGGGCAGAGATG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATCCAGGGATTCCAGGTaGTCCCATGTCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKSRDSR*SHVTFL
Trigger: AAGAAAGGTGACATGGGACCACCTGGAATCCCTGGA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp TCTTACAAGAGTACAGTACAGGACAGGCTGGGGAAAATGAATTCTTTAGATCAACTGTCTAGATGCAGGTaGAGGAACTTGCTAGAACCT +
Preference number: 4 (lower is better)
Translates to: SYKSTVQDRLGKMNSLDQLSRCR*RNLLEP
Trigger: AGGTTCTAGCAAGTTCCTCCACCTGCATCTAGACAG...TTGATCTAAAGAATTCATTTTCCCCAGCCTGTCCTGTACTGTACTCTTGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR TCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTTCAGGTCAAAACCTGTaGTTTCCTTGGTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSSGQNL*FPWFLH
Trigger: ATGGAGGAACCAAGGAAATCACAGGTTTTGACCTGA...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAAGATTTCCTTCACACTaGACAAATCCATCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKRFPSH*TNPSGQ
Trigger: TTGACCTGATGGATTTGTTCAGTGTGAAGGAAATCT...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR TCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACTTCCCACTGGGCTCTaGGTTCAAGTTTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKLPTGL*VQVSEI
Trigger: GATTTCTGAAACTTGAACTCAGAGCCCAGTGGGAAG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR GCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGTTTCAGAAATCCACTaGAGTCTTCTGGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSVSEIH*SLLAFQ
Trigger: CTGGAAAGCCAGAAGACTGCAGTGGATTTCTGAAAC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp TCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTCCTGGGCCAACTTTAAAGGAGTaGAAAAGAACTCACAAAGCA +
Preference number: 4 (lower is better)
Translates to: SASLLSLDSGGVCIISPGPTLKE*KRTHKA
Trigger: TGCTTTGTGAGTTCTTTTCCACTCCTTTAAAGTTGG...CCCAGGAGAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACAATCGAGAATGAAGCCCATTaGCTCATTTTCTTAAAGTTT +
Preference number: 4 (lower is better)
Translates to: KMGSYASDGGCQKNEETIENEAH*LIFLKF
Trigger: AAACTTTAAGAAAATGAGCCAATGGGCTTCATTCTC...GATTGTTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATACTCTCTCTGGACAGTaGTGGTGTTTGTATTATTTC +
Preference number: 4 (lower is better)
Translates to: DRPAASVGFNNFEVSQENTLSGQ*WCLYYF
Trigger: GAAATAATACAAACACCACCACTGTCCAGAGAGAGT...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGGAAACACAAGTGGATaGTCACCACATCCACTTGTT +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSGNTSG*SPHPLV
Trigger: AACAAGTGGATGTGGTGACCATCCACTTGTGTTTCC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp CTGCTTCTTGATGTGAGAAAGGGGTCCCAGGAATATGCATTTAAACTTGTTCTCGTGTCAAAAATCCTGTaGTGCTGGTTAAAAATGCAG +
Preference number: 4 (lower is better)
Translates to: LLLDVRKGSQEYAFKLVLVSKIL*CWLKMQ
Trigger: CTGCATTTTTAACCAGCACCACAGGATTTTTGACAC...GAGAACAAGTTTAAATGCATATTCCTGGGACCCCTTTCTCACATCAAGAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR GCA 90 bp GATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCACTTCTGTGAGCTTAAACATTCCTCATGGTTaGAAATTCTTTCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: DPTKPLPTHRHYFTSVSLNIPHG*KFFLFL
Trigger: CAGAAAGAGAAAGAATTTGCAACCATGAGGAATGTT...TAAGCTCACAGAAGTGAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR GCA 90 bp TCATCTCTTTATTCACTGGACATACTGAACACCATACTGGACAGTCTGGCACTGTCAAAAATCCTGTGGTaGTGGTTAAAAATGCAGATT +
Preference number: 4 (lower is better)
Translates to: SSLYSLDILNTILDSLALSKILW*WLKMQI
Trigger: AATCTGCATTTTTAACCAGCACCACAGGATTTTTGA...CAGTGCCAGACTGTCCAGTATGGTGTTCAGTATGTCCAGTGAATAAAGAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR CCA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAATGGGAACATTCCTCATaGTTGCAAATTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKWEHSS*LQILSL
Trigger: AAGAGAAAGAATTTGCAACCATGAGGAATGTTCCCA...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTAGGTTTTCCCATCTTTaGCCAAGACATATGATCCCA +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSRFSHL*PRHMIP
Trigger: TGGGATCATATGTCTTGGCCAAAGATGGGAAAACCT...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TCATCTCTTTATTCACTGGACATACTGAACACCATACTGGACAGTCTGGCACTGTTTAAACTTGTTCTCTaGGTGATTCTTATGGACTGT +
Preference number: 4 (lower is better)
Translates to: SSLYSLDILNTILDSLALFKLVL*VILMDC
Trigger: ACAGTCCATAAGAATCACCCAGAGAACAAGTTTAAA...CAGTGCCAGACTGTCCAGTATGGTGTTCAGTATGTCCAGTGAATAAAGAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR GCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTTTAACACTCAAGGGCTaGCTCTTCAACATAGGTTTT +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSLTLKG*LFNIGF
Trigger: AAAACCTATGTTGAAGAGGCAGCCCTTGAGTGTTAA...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CCA 90 bp TGTTTGTTCATCTCTTTATTCACTGGACATACTGAACACCATACTGGACAGTCTGAACTTGCTAGAACCTaGTTTTTGATTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CLFISLFTGHTEHHTGQSELART*FLIPGE
Trigger: TTCTCCAGGAATCAAAAACCAGGTTCTAGCAAGTTC...AGACTGTCCAGTATGGTGTTCAGTATGTCCAGTGAATAAAGAGATGAACAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR TCA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAAGATTTCCTTCACACTaGACAAATCCATCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKRFPSH*TNPSGQ
Trigger: TTGACCTGATGGATTTGTTCAGTGTGAAGGAAATCT...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CCA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCCAACTTTAAAGGAGTaGAAAAGAACTCACAAAGCA +
Preference number: 4 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSPTLKE*KRTHKA
Trigger: TGCTTTGTGAGTTCTTTTCCACTCCTTTAAAGTTGG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS CCA 90 bp AGGGAGCCCAGGAGCACCAGGATCTCCCCTGGGACCAACTGGCCCTaGGCTGCCTTCTTCCCCCGCTGCACCCTTCTCACCACGCTCCCC +
Preference number: 5 (lower is better)
Translates to: REPRSTRISPGTNWP*AAFFPRCTLLTTLP
Trigger: GGGGAGCGTGGTGAGAAGGGTGCAGCGGGGGAAGAAGGCAGCCCAGGGCCAGTTGGTCCCAGGGGAGATCCTGGTGCTCCTGGGCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 90 bp TCCTGGTGGTCCGGAAGGGCCAGGAGGGCCAGCAACCCCAATGCCTaGGTCACCACGGCTGCCAGGAGAACCAGGGATCCCAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SWWSGRARRASNPNA*VTTAARRTRDPRSS
Trigger: GGAGCTCCTGGGATCCCTGGTTCTCCTGGCAGCCGTGGTGACCCAGGCATTGGGGTTGCTGGCCCTCCTGGCCCTTCCGGACCACCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 90 bp GGCACACTGGGAAGGGTCACATTGGCCTGGGGGACCGGGAGGTCCTaGGAGGCCAGGATGTCCAGCTGGTCCTGTCTCCCCTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GTLGRVTLAWGTGRS*EARMSSWSCLPLRA
Trigger: GGCCCTCAAGGGGAGACAGGACCAGCTGGACATCCTGGCCTCCCAGGACCTCCCGGTCCCCCAGGCCAATGTGACCCTTCCCAGTGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 90 bp TTCTTCCCCCGCTGCACCCTTCTCACCACGCTCCCCATCTTTCCCTaGGGTGCCTCTGAGGCCGGGAGCACCCACACTTCCTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: FFPRCTLLTTLPIFP*GASEAGSTHTSWRA
Trigger: GGCCCTCCAGGAAGTGTGGGTGCTCCCGGCCTCAGAGGCACCCCAGGGAAAGATGGGGAGCGTGGTGAGAAGGGTGCAGCGGGGGAAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS GCA 90 bp CACCTTTCTTCCCTCGGAGACCTTGCAAACCAGGAGGTCCATCCCTaGCTTCTGGGCCTATTGGACCCCGAGCTCCTGGAGGACCGGGGG +
Preference number: 5 (lower is better)
Translates to: HLSSLGDLANQEVHP*LLGLLDPELLEDRG
Trigger: CCCCCGGTCCTCCAGGAGCTCGGGGTCCAATAGGCCCAGAAGGCAGGGATGGACCTCCTGGTTTGCAAGGTCTCCGAGGGAAGAAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS CCA 90 bp GAGTCCTTTAGGGACCCTTCACATTACCCGGCCGGGCAGCAAGGCTaGCGAAGTAGGCACACTGGGAAGGGTCACATTGGCCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: ESFRDPSHYPAGQQG*RSRHTGKGHIGLGD
Trigger: GTCCCCCAGGCCAATGTGACCCTTCCCAGTGTGCCTACTTCGCCAGCCTTGCTGCCCGGCCGGGTAATGTGAAGGGTCCCTAAAGGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 90 bp TGTGTGAGAAACAGAAGAACAGGGAAAGCGGAGAAGACACTTCCTTaGGGAGAAACGCCGCAGCCTCGGCCAGCCCCGCCACTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: CVRNRRTGKAEKTLP*GETPQPRPAPPLPR
Trigger: CCTGGGCAGTGGCGGGGCTGGCCGAGGCTGCGGCGTTTCTCCCCAAGGAAGTGTCTTCTCCGCTTTCCCTGTTCTTCTGTTTCTCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000484387.1
CDS-3UTR CAA 90 bp GCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTCAGGACCGGGGGCGCCTaGGTGACCTCTGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ADSVFSKCTSRREVGTFLRTGGA*VTSGSW
Trigger: CCAGGACCCAGAGGTCACCAAGGCGCCCCCGGTCCT...GAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp ACAGAGCCGCCTTGGAGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGGGAAGGGTCACATaGGCCTGGGGGACCGGGAGG +
Preference number: 5 (lower is better)
Translates to: TEPPWRYKFPSSGQCPGQLGRVT*AWGTGR
Trigger: CCTCCCGGTCCCCCAGGCCAATGTGACCCTTCCCAG...TTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 90 bp TCCCGTTCCTCGATGGGTAGTGTCTGCACCAGCGCACAGTCAATGTaGAGGGAGACGTTCTGGGCCTGGATGCTCAGGGCCATCTTGTGC +
Preference number: 5 (lower is better)
Translates to: SRSSMGSVCTSAQSM*RETFWAWMLRAILC
Trigger: GCACAAGATGGCCCTGAGCATCCAGGCCCAGAACGTCTCCCTGCACATTGACTGTGCGCTGGTGCAGACACTACCCATCGAGGAACGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 90 bp CTCCTGCTTTGCCCGGCTCTCCAGGGGGACCCGGCTTTCCATCTCTaGCCTCTTTGCCTTCTTCTCCTGGGATTCCGGGTAATCCAGATG +
Preference number: 5 (lower is better)
Translates to: LLLCPALQGDPAFHL*PLCLLLLGFRVIQM
Trigger: CATCTGGATTACCCGGAATCCCAGGAGAAGAAGGCAAAGAGGGCAGAGATGGAAAGCCGGGTCCCCCTGGAGAGCCGGGCAAAGCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 90 bp AGGCCTGTGTGGCCTTTGTGGCCTGGGATTCCAGGGTCCCCAGGCTaGCCTTTTCCACCAGGAGGTCCTTTGTCACCTTTGATCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RPVWPLWPGIPGSPG*PFPPGGPLSPLIPG
Trigger: TCCTGGGATCAAAGGTGACAAAGGACCTCCTGGTGGAAAAGGCCAGCCTGGGGACCCTGGAATCCCAGGCCACAAAGGCCACACAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS-3UTR CAA 90 bp CTGAGGGCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACAGCACCTTCCTGTCCCTaGGCACCCGGTGGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: LRADSVFSKCTSRREVGTAPSCP*APGGPV
Trigger: CACTGGACCACCGGGTGCCAAGGGACAGGAAGGTGC...TGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTCTGGGCCCCTTGGTCCTaGGGGACCCTGTGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: ADSVFSKCTSRREVGTFLWAPWS*GTLWPS
Trigger: ACTGGGCCACAGGGTCCCCAAGGACCAAGGGGCCCA...GAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 90 bp TCCAGCCGGATGGAGACCTGTGGGATGCTGTACTGGTCGATGACCTaGCAGATATACCAGTCTTCCTTCCGAGAGGTTTTCCTGAACCGG +
Preference number: 5 (lower is better)
Translates to: SSRMETCGMLYWSMT*QIYQSSFREVFLNR
Trigger: CCGGTTCAGGAAAACCTCTCGGAAGGAAGACTGGTATATCTGGCAGGTCATCGACCAGTACAGCATCCCACAGGTCTCCATCCGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS GCA 90 bp CACCCTGACAGCATCTTTCATGGCACCCACAGCGTTGTACTCGACTaGCTTGTTTTCACCATCCAGCCGGATGGAGACCTGTGGGATGCT +
Preference number: 5 (lower is better)
Translates to: HPDSIFHGTHSVVLD*LVFTIQPDGDLWDA
Trigger: AGCATCCCACAGGTCTCCATCCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCTGTGGGTGCCATGAAAGATGCTGTCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAACGCCGGGCAGCCGCCTaGACCTCCTCCTGCGAGCCA +
Preference number: 5 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKRRAAA*TSSCEP
Trigger: TGGCTCGCAGGAGGAGGTCAAGGCGGCTGCCCGGCG...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS GCA 90 bp AACTCCAGGATGACCCTGATCACCTTTCTGCCCAACCTCACCATCTaGACCACGTTCTCCTTGACTTCCCTGTGGTCCAGCTATTCCTGG +
Preference number: 5 (lower is better)
Translates to: NSRMTLITFLPNLTI*TTFSLTSLWSSYSW
Trigger: CCAGGAATAGCTGGACCACAGGGAAGTCAAGGAGAACGTGGTGCAGATGGTGAGGTTGGGCAGAAAGGTGATCAGGGTCATCCTGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 90 bp CAATCACAGTCTTGCCCTGGATGTCAATGTTCTCCCGTTCCTCGATaGGTAGTGTCTGCACCAGCGCACAGTCAATGTGCAGGGAGACGT +
Preference number: 5 (lower is better)
Translates to: QSQSCPGCQCSPVPR*VVSAPAHSQCAGRR
Trigger: ACGTCTCCCTGCACATTGACTGTGCGCTGGTGCAGACACTACCCATCGAGGAACGGGAGAACATTGACATCCAGGGCAAGACTGTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGCGCCGGGCAGCCGCCTaGACCTCCTCCTGCGAGCCA +
Preference number: 5 (lower is better)
Translates to: NEETISCPTNQVFPTLKERRAAA*TSSCEP
Trigger: TGGCTCGCAGGAGGAGGTCAAGGCGGCTGCCCGGCG...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAAGGACCGGGGGCGCCTaGGTGACCTCTGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKRTGGA*VTSGSW
Trigger: CCAGGACCCAGAGGTCACCAAGGCGCCCCCGGTCCT...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAATGCCCGGTGGGCCCCTaGGTCCTTGGGGACCCTGTG +
Preference number: 5 (lower is better)
Translates to: RNNLLPHESSFPNFKGVECPVGP*VLGDPV
Trigger: CACAGGGTCCCCAAGGACCAAGGGGCCCACCGGGCA...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCACTTCTGTGAGCTTAGCCAGGTTCCCCGGGTaGACCTGGGATTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: DPTKPLPTHRHYFTSVSLARFPG*TWDSRG
Trigger: CCCCCTGGAATCCCAGGTCAACCCGGGGAACCTGGC...TAAGCTCACAGAAGTGAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 90 bp AGTCAATGGGCACACTGTCGTAGAGGCGCTTGCCAATCACAGTCTTaGCCTGGATGTCAATGTTCTCCCGTTCCTCGATGGGTAGTGTCT +
Preference number: 5 (lower is better)
Translates to: SQWAHCRRGACQSQS*PGCQCSPVPRWVVS
Trigger: AGACACTACCCATCGAGGAACGGGAGAACATTGACATCCAGGGCAAGACTGTGATTGGCAAGCGCCTCTACGACAGTGTGCCCATTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 90 bp TCCGCTGTAGGTCAAAGTCAATGGGCACACTGTCGTAGAGGCGCTTaGCAATCACAGTCTTGCCCTGGATGTCAATGTTCTCCCGTTCCT +
Preference number: 5 (lower is better)
Translates to: SAVGQSQWAHCRRGA*QSQSCPGCQCSPVP
Trigger: AGGAACGGGAGAACATTGACATCCAGGGCAAGACTGTGATTGGCAAGCGCCTCTACGACAGTGTGCCCATTGACTTTGACCTACAGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GGAAACTTGGATTTATTGAGCACCTGTTCAGGCAGGGCATGTCGCATACACACAGGAGAAGACACTTCCTaGGGGAGAAACGCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: GNLDLLSTCSGRACRIHTGEDTS*GRNAAA
Trigger: GGCTGCGGCGTTTCTCCCCAAGGAAGTGTCTTCTCC...TGTGTGTATGCGACATGCCCTGCCTGAACAGGTGCTCAATAAATCCAAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GCTGATTCTGTGTTTTCCAAATGCACGTCCCGTCGGGAGGTGGGAACATTCCTCCACATCCTCAGTACTTaGCACCACAGGGAAGGATCC +
Preference number: 5 (lower is better)
Translates to: ADSVFSKCTSRREVGTFLHILST*HHREGS
Trigger: GGATCCTTCCCTGTGGTGCAAAGTACTGAGGATGTG...GAGGAATGTTCCCACCTCCCGACGGGACGTGCATTTGGAAAACACAGAATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp TCCTTAAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAATGCCTTCTGGGCCTATaGGACCCCGAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SLKWAVTRQMGAVRRMKKCLLGL*DPELLE
Trigger: CTCCAGGAGCTCGGGGTCCAATAGGCCCAGAAGGCA...TTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTTAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp TCTGGTCAGGGTTTTGTAGCACCAAGAGTTTCCTTAAAATGGGCAGTTACGCGTCTCTCCTTTGGGCCCTaGTTCTCCGGGCATCCGTGG +
Preference number: 5 (lower is better)
Translates to: SGQGFVAPRVSLKWAVTRLSFGP*FSGHPW
Trigger: CCACGGATGCCCGGAGAACAAGGGCCCAAAGGAGAG...ACGCGTAACTGCCCATTTTAAGGAAACTCTTGGTGCTACAAAACCCTGACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp TCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTCCTGGGTCGCCTGTGTGTCCCTaGAAGCCAGGTGGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: SASLLSLDSGGVCIISPGSPVCP*KPGGPR
Trigger: CCGAGGCCCACCTGGCTTCAAGGGACACACAGGCGA...CCCAGGAGAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp AGATACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGCTTCCCCAGCTCTTCTaGAATAAGCCGACGCAGGGT +
Preference number: 5 (lower is better)
Translates to: RYKFPSSGQCPGQLPIIRLPQLF*NKPTQG
Trigger: ACCCTGCGTCGGCTTATTCAAGAAGAGCTGGGGAAG...CCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp CAACATAGGTTTTCCCATCTTTGGCCAAGACATATGATCCCACAAAGCCATTGCTCCCCTCTCATGCCTTaGCTGCCGTCTCTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: QHRFSHLWPRHMIPQSHCSPLMP*LPSLPG
Trigger: CCCTGGGAGAGACGGCAGCAAAGGCATGAGAGGGGA...GCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAGATGGGAAAACCTATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp CTGCCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATGACCTGGTGGTCCATTaGGCCCGTCCTTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LPIIRETQVDGHHIHLFYDLVVH*ARPFQG
Trigger: CCCCTGGAAAGGACGGGCCAAATGGACCACCAGGTC...ATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGCACCTTCCTGTCCCTaGGCACCCGGTGGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: DRPAASVGFNNFEVSQENAPSCP*APGGPV
Trigger: CACTGGACCACCGGGTGCCAAGGGACAGGAAGGTGC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp CTGCCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATGAAGAGAGGCCCGGCTaGCCAGGAGGCCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LPIIRETQVDGHHIHLFYEERPG*PGGPLS
Trigger: AGAAAGAGGGCCTCCTGGCAAGCCGGGCCTCTCTTC...ATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp TTCTCTTTCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTGCCCGGTGGGCCCCTaGGTCCTTGGGGACCCTGTG +
Preference number: 5 (lower is better)
Translates to: FSFCFFTLSGQWWCLYYFCPVGP*VLGDPV
Trigger: CACAGGGTCCCCAAGGACCAAGGGGCCCACCGGGCA...GAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGAAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp AAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACAATCGCACCTGGGTCACCTTaGGCTCCTCGCTCACCTTTG +
Preference number: 5 (lower is better)
Translates to: KMGSYASDGGCQKNEETIAPGSP*APRSPL
Trigger: CAAAGGTGAGCGAGGAGCCAAAGGTGACCCAGGTGC...GATTGTTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 90 bp TTCATGGGAACTGAAAGCTGTGGGATGCTGTACTGGTCGATGACCTaGCAGATATACCAGTCTTCCTTCCGAGAGGTTTTCCTGAACCGG +
Preference number: 5 (lower is better)
Translates to: FMGTESCGMLYWSMT*QIYQSSFREVFLNR
Trigger: CCGGTTCAGGAAAACCTCTCGGAAGGAAGACTGGTATATCTGGCAGGTCATCGACCAGTACAGCATCCCACAGCTTTCAGTTCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS-3UTR CAA 90 bp AACACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATTTCACCTCGTTCTCCTaGGAGACCAGGAGCTCCGAC +
Preference number: 5 (lower is better)
Translates to: NTQGLPLQHRFSHLWPRHFTSFS*ETRSSD
Trigger: GTCGGAGCTCCTGGTCTCCAAGGAGAACGAGGTGAA...ATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAGAAGAGAGGCCCGGCTaGCCAGGAGGCCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEEERPG*PGGPLS
Trigger: AGAAAGAGGGCCTCCTGGCAAGCCGGGCCTCTCTTC...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAATGGGCCCCTTGGTCCTaGGGGACCCTGTGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: RPAASVGFNNFEVSQENKWAPWS*GTLWPS
Trigger: ACTGGGCCACAGGGTCCCCAAGGACCAAGGGGCCCA...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGCCCGGTGATCCATTCTaGCCCGGTGGGCCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: NEETISCPTNQVFPTLKEPGDPF*PGGPLG
Trigger: ACCAAGGGGCCCACCGGGCAAGAATGGATCACCGGG...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAGCCAGGTTCCCCGGGTaGACCTGGGATTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: RPAASVGFNNFEVSQENKARFPG*TWDSRG
Trigger: CCCCCTGGAATCCCAGGTCAACCCGGGGAACCTGGC...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACTGGGAAGGGTCACATaGGCCTGGGGGACCGGGAGG +
Preference number: 5 (lower is better)
Translates to: RPAASVGFNNFEVSQENKLGRVT*AWGTGR
Trigger: CCTCCCGGTCCCCCAGGCCAATGTGACCCTTCCCAG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS CCA 90 bp GCTTTGAATTTCAGATTTCTCTTTCCTCACCGGACTGTGTGCTGGTaGAGAGCTGTCCTACCTTCATGGGAACTGAAAGCTGTGGGATGC +
Preference number: 5 (lower is better)
Translates to: ALNFRFLFPHRTVCW*RAVLPSWELKAVGC
Trigger: GCATCCCACAGCTTTCAGTTCCCATGAAGGTAGGACAGCTCTCCACCAGCACACAGTCCGGTGAGGAAAGAGAAATCTGAAATTCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS-3UTR CAA 90 bp AACACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATCGGTCAAAGAGGTCATaGACCCGAGAACCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: NTQGLPLQHRFSHLWPRHRSKRS*TREPRK
Trigger: CTTCCGAGGTTCTCGGGTCAATGACCTCTTTGACCG...ATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGCTCTCCTTTGGGCCCTaGTTCTCCGGGCATCCGTGG +
Preference number: 5 (lower is better)
Translates to: NEETISCPTNQVFPTLKELSFGP*FSGHPW
Trigger: CCACGGATGCCCGGAGAACAAGGGCCCAAAGGAGAG...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp AGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAATTTCCGCAAGCAGCCTaGGTTCCTAGGGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: RNNLLPHESSFPNFKGVEFPQAA*VPRGPG
Trigger: CCCTGGACCCCTAGGAACCAAGGCTGCTTGCGGAAA...TTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAATCGCCTGTGTGTCCCTaGAAGCCAGGTGGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: RPAASVGFNNFEVSQENKSPVCP*KPGGPR
Trigger: CCGAGGCCCACCTGGCTTCAAGGGACACACAGGCGA...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAACCCGGTGATCCATTCTaGCCCGGTGGGCCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: RPAASVGFNNFEVSQENKPGDPF*PGGPLG
Trigger: ACCAAGGGGCCCACCGGGCAAGAATGGATCACCGGG...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATGCTCCTCGCTCACCTTaGGGACCTATGGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: DRPAASVGFNNFEVSQENAPRSP*GPMGPE
Trigger: CTCTGGACCCATAGGTCCCAAAGGTGAGCGAGGAGC...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGCACCTGGGTCACCTTaGGCTCCTCGCTCACCTTTG +
Preference number: 5 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKAPGSP*APRSPL
Trigger: CAAAGGTGAGCGAGGAGCCAAAGGTGACCCAGGTGC...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp TTCTCTTTCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTGGTCCTGTCTCCCCTaGAGGGCCAGGGATCCCAGG +
Preference number: 5 (lower is better)
Translates to: FSFCFFTLSGQWWCLYYFWSCLP*RARDPR
Trigger: CCTGGGATCCCTGGCCCTCAAGGGGAGACAGGACCA...GAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGAAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAATGGTCCTGTCTCCCCTaGAGGGCCAGGGATCCCAGG +
Preference number: 5 (lower is better)
Translates to: RPAASVGFNNFEVSQENKWSCLP*RARDPR
Trigger: CCTGGGATCCCTGGCCCTCAAGGGGAGACAGGACCA...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGCTCCTCGATCCCCCTaGGTTCCTAGGGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSAPRSP*VPRGPG
Trigger: CCCTGGACCCCTAGGAACCAAGGGGGATCGAGGAGC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435777.2
CDS CCA 90 bp ATGGCTTTGAATTTCAGATTTCTCTTTCCTCACCGGACTGTGTGCTaGTGGAGAGCTGTCCTACCTTCATGGGAACTGAAAGCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: MALNFRFLFPHRTVC*WRAVLPSWELKAVG
Trigger: TCCCACAGCTTTCAGTTCCCATGAAGGTAGGACAGCTCTCCACCAGCACACAGTCCGGTGAGGAAAGAGAAATCTGAAATTCAAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS-3UTR CAA 90 bp AACACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATGCTGGGCAGGAGCAGTaGATGGTCTTCAAAAACCCA +
Preference number: 5 (lower is better)
Translates to: NTQGLPLQHRFSHLWPRHAGQEQ*MVFKNP
Trigger: TGGGTTTTTGAAGACCATCAACTGCTCCTGCCCAGC...ATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAATGCCTTCTGGGCCTATaGGACCCCGAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RPAASVGFNNFEVSQENKCLLGL*DPELLE
Trigger: CTCCAGGAGCTCGGGGTCCAATAGGCCCAGAAGGCA...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAACTTCCCTCGGAGACCTaGCAAACCAGGAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKLPSET*QTRRSI
Trigger: GATGGACCTCCTGGTTTGCAAGGTCTCCGAGGGAAG...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp ACTCAAGGGCTGCCTCTTCAACATAGGTTTTCCCATCTTTGGCCAAGACATATGCCATCTCTGCCCTCTTaGCCTTCTTCTCCTGGGATT +
Preference number: 5 (lower is better)
Translates to: TQGLPLQHRFSHLWPRHMPSLPS*PSSPGI
Trigger: AATCCCAGGAGAAGAAGGCAAAGAGGGCAGAGATGG...CATATGTCTTGGCCAAAGATGGGAAAACCTATGTTGAAGAGGCAGCCCTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp CTTGATGCCATTTATTTCAGAGACAGAGCCGCCTTGGAGATACAAATTTCCCAGCCACCAGGAGGTCCTTaGTCACCTTTGATCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LDAIYFRDRAALEIQISQPPGGP*SPLIPG
Trigger: TCCTGGGATCAAAGGTGACAAAGGACCTCCTGGTGG...CTGGGAAATTTGTATCTCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 90 bp TTGATGGCTTTGAATTTCAGATTTCTCTTTCCTCACCGGACTGTGTaGTGGTGGAGAGCTGTCCTACCTTCATGGGAACTGAAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LMALNFRFLFPHRTV*WWRAVLPSWELKAV
Trigger: CACAGCTTTCAGTTCCCATGAAGGTAGGACAGCTCTCCACCAGCACACAGTCCGGTGAGGAAAGAGAAATCTGAAATTCAAAGCCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS-3UTR CAA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAAGCTTGCCCCGGATCTaGTCGATGGCATTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKSLPRI*SMALKS
Trigger: CGACTTCAATGCCATCGACAAGATCCGGGGCAAGCT...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GATCCCACAAAGCCATTGCCAACCCACAGACATTATTTCACTTCTGTGAGCTTATTGTACTCGACTGCCTaGTTTTCACCATCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: DPTKPLPTHRHYFTSVSLLYSTA*FSPSSR
Trigger: CCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAA...TAAGCTCACAGAAGTGAAATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCCTATGTCTCCCTTaGGACCAGGGAGCCCCATGG +
Preference number: 5 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSLLCLP*DQGAPW
Trigger: CCATGGGGCTCCCTGGTCCAAAGGGAGACATAGGAG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAGACCTGGTGGTCCATTaGGCCCGTCCTTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKDLVVH*ARPFQG
Trigger: CCCCTGGAAAGGACGGGCCAAATGGACCACCAGGTC...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp TTCTCTTTCTGCTTCTTTACTCTCTCTGGACAGTGGTGGTGTTTGTATTATTTCTCTCCTGGTTCTCCCTaGGTTCCTGGCGGACCTGGT +
Preference number: 5 (lower is better)
Translates to: FSFCFFTLSGQWWCLYYFSPGSP*VPGGPG
Trigger: ACCAGGTCCGCCAGGAACCAAGGGAGAACCAGGAGA...GAAATAATACAAACACCACCACTGTCCAGAGAGAGTAAAGAAGCAGAAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCCACCAGGAGGTCCTTaGTCACCTTTGATCCCAGGA +
Preference number: 5 (lower is better)
Translates to: DRPAASVGFNNFEVSQENPPGGP*SPLIPG
Trigger: TCCTGGGATCAAAGGTGACAAAGGACCTCCTGGTGG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCTTCCCCAGCTCTTCTaGAATAAGCCGACGCAGGGT +
Preference number: 5 (lower is better)
Translates to: DRPAASVGFNNFEVSQENLPQLF*NKPTQG
Trigger: ACCCTGCGTCGGCTTATTCAAGAAGAGCTGGGGAAG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTGCTCCTCGCTCACCTTaGGGACCTATGGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSAPRSP*GPMGPE
Trigger: CTCTGGACCCATAGGTCCCAAAGGTGAGCGAGGAGC...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATCACATCCTCAGTACTTaGCACCACAGGGAAGGATCC +
Preference number: 5 (lower is better)
Translates to: DRPAASVGFNNFEVSQENHILST*HHREGS
Trigger: GGATCCTTCCCTGTGGTGCAAAGTACTGAGGATGTG...ATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAATGGCACCCACAGCGTaGTACTCGACTGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKMAPTA*YSTALF
Trigger: AAACAAGGCAGTCGAGTACAACGCTGTGGGTGCCAT...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTTCCCTCGGAGACCTaGCAAACCAGGAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSLPSET*QTRRSI
Trigger: GATGGACCTCCTGGTTTGCAAGGTCTCCGAGGGAAG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATCTCCTGGTTCTCCCTaGGTTCCTGGCGGACCTGGT +
Preference number: 5 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKSPGSP*VPGGPG
Trigger: ACCAGGTCCGCCAGGAACCAAGGGAGAACCAGGAGA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGCCAGGAGGGCAGTCATaGCACACATCCTTAGCCAAG +
Preference number: 5 (lower is better)
Translates to: NEETISCPTNQVFPTLKEPGGQS*HTSLAK
Trigger: CTTGGCTAAGGATGTGTGCAATGACTGCCCTCCTGG...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp TCTGGTCAGGGTTTTGTAGCACCAAGAGTTTCCTTAAAATGGGCAGTTACGCGTTTTCCTGGGACACCTTaGTCCCCTTTAAAACCTGGT +
Preference number: 5 (lower is better)
Translates to: SGQGFVAPRVSLKWAVTRFPGTP*SPLKPG
Trigger: ACCAGGTTTTAAAGGGGACAAAGGTGTCCCAGGAAA...ACGCGTAACTGCCCATTTTAAGGAAACTCTTGGTGCTACAAAACCCTGACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp CGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAATGCACCACGTTCTCCTaGACTTCCCTGTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RPAASVGFNNFEVSQENKCTTFS*TSLWSS
Trigger: GCTGGACCACAGGGAAGTCAAGGAGAACGTGGTGCA...TTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGGGTCCTGCCACAGCGTaGTACTCGACTGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: NEETISCPTNQVFPTLKEGPATA*YSTALF
Trigger: AAACAAGGCAGTCGAGTACAACGCTGTGGCAGGACC...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435777.2
CDS-3UTR CAA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTAGCTTGCCCCGGATCTaGTCGATGGCATTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSSLPRI*SMALKS
Trigger: CGACTTCAATGCCATCGACAAGATCCGGGGCAAGCT...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp AATGAAGAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTTGTACTCGACTGCCTaGTTTTCACCATCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: NEETISCPTNQVFPTLKELYSTA*FSPSSR
Trigger: CCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAA...CTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAATGCACCACGTTCTCCTaGACTTCCCTGTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKCTTFS*TSLWSS
Trigger: GCTGGACCACAGGGAAGTCAAGGAGAACGTGGTGCA...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp ACAAATTTCCCAGCTCTGGTCAGTGCCCTGGCCAACTGCCCATCATTAGGGAAAGAACATTCCTCATGGTaGCAAATTCTTTCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: TNFPALVSALANCPSLGKEHSSW*QILSLS
Trigger: AGAAAGAGAAAGAATTTGCAACCATGAGGAATGTTC...TTTCCCTAATGATGGGCAGTTGGCCAGGGCACTGACCAGAGCTGGGAAATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp CTTGATGCCATTTATTTCAGAGACAGAGCCGCCTTGGAGATACAAATTTCCCAGGATCCCACAAAGCCATaGCCAACCCACAGACATTAT +
Preference number: 5 (lower is better)
Translates to: LDAIYFRDRAALEIQISQDPTKP*PTHRHY
Trigger: ATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATC...CTGGGAAATTTGTATCTCCAAGGCGGCTCTGTCTCTGAAATAAATGGCATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp CTTTGGCCAAGACATATGATCCCACAAAGCCATTGCCAACCCACAGACATTATTACCAACAAGAGGAACTaGAAGGGGCCTTACACAGTT +
Preference number: 5 (lower is better)
Translates to: LWPRHMIPQSHCQPTDIITNKRN*KGPYTV
Trigger: AACTGTGTAAGGCCCCTTCAAGTTCCTCTTGTTGGT...AATAATGTCTGTGGGTTGGCAATGGCTTTGTGGGATCATATGTCTTGGCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTATCCCCCTTAACACATaGCCCTCCCAGTGCACAGTT +
Preference number: 5 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSIPLNT*PSQCTV
Trigger: AACTGTGCACTGGGAGGGCAATGTGTTAAGGGGGAT...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAACCAGGAGGGCAGTCATaGCACACATCCTTAGCCAAG +
Preference number: 5 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKPGGQS*HTSLAK
Trigger: CTTGGCTAAGGATGTGTGCAATGACTGCCCTCCTGG...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAATTTCCTGGGACACCTTaGTCCCCTTTAAAACCTGGT +
Preference number: 5 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKFPGTP*SPLKPG
Trigger: ACCAGGTTTTAAAGGGGACAAAGGTGTCCCAGGAAA...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp AATAATAATCTGACCGACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCCATCTCTGCCCTCTTaGCCTTCTTCTCCTGGGATT +
Preference number: 5 (lower is better)
Translates to: NNNLTDRQRLLDLIILRSPSLPS*PSSPGI
Trigger: AATCCCAGGAGAAGAAGGCAAAGAGGGCAGAGATGG...AGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTCGGTCAGATTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp TCTACCCTGCTTCTTGATGTGAGAAAGGGGTCCCAGGAATATGCATTTAAACTTGCTAGAACCTGGTTTTaGATTCCTGGAGAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: STLLLDVRKGSQEYAFKLARTWF*IPGEGV
Trigger: TACCCCTTCTCCAGGAATCAAAAACCAGGTTCTAGC...AAGTTTAAATGCATATTCCTGGGACCCCTTTCTCACATCAAGAAGCAGGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS-3UTR CAA 90 bp ACTGTTCCAGGGGCTAAGAATTCAGTAGACTCCACCCTTCTTACAAGAGTACAGGATACCAACACTTCATaGGCATCAGTAAGGCAAAAC +
Preference number: 5 (lower is better)
Translates to: TVPGAKNSVDSTLLTRVQDTNTS*ASVRQN
Trigger: GTTTTGCCTTACTGATGCCAATGAAGTGTTGGTATC...CTGTACTCTTGTAAGAAGGGTGGAGTCTACTGAATTCTTAGCCCCTGGAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522546.1
CDS TCA 90 bp AGGATGCCATGGTCTGAATGTTGCTGTCTTCCTAAATCCATATGTTaGAATCTTCACACCAAGGTGATGGTAACAGCAGATGGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RMPWSECCCLPKSIC*NLHTKVMVTADGVL
Trigger: CAAAACCCCATCTGCTGTTACCATCACCTTGGTGTGAAGATTTCAACATATGGATTTAGGAAGACAGCAACATTCAGACCATGGCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS-3UTR CAA 90 bp CCCATCATTAGGGAAACACAAGTGGATGGTCACCACATCCACTTGTTTTATAATTTGCCAATCACAGTCTaGCCCTGGATGTCAATGTTC +
Preference number: 5 (lower is better)
Translates to: PIIRETQVDGHHIHLFYNLPITV*PWMSMF
Trigger: GAACATTGACATCCAGGGCAAGACTGTGATTGGCAA...ATTATAAAACAAGTGGATGTGGTGACCATCCACTTGTGTTTCCCTAATGATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GAAACAATCTCCTGCCCCACGAATCAAGTTTTCCCAACTTTAAAGGAGTGGAAAGACCGGCAGCGTCTGTaGGATTTAATAATTTTGAGG +
Preference number: 5 (lower is better)
Translates to: ETISCPTNQVFPTLKEWKDRQRL*DLIILR
Trigger: CCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC...TTTCCACTCCTTTAAAGTTGGGAAAACTTGATTCGTGGGGCAGGAGATTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS-3UTR CAA 90 bp TCCTTAAAATGGGCAGTTACGCGTCAGATGGGGGCTGTCAGAAGAATGAAGAAACATACACACATGCACTaGATGCCATTTATTTCAGAG +
Preference number: 5 (lower is better)
Translates to: SLKWAVTRQMGAVRRMKKHTHMH*MPFISE
Trigger: CTCTGAAATAAATGGCATCAAGTGCATGTGTGTATG...TTTCTTCATTCTTCTGACAGCCCCCATCTGACGCGTAACTGCCCATTTTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS-3UTR CAA 90 bp GACCGGCAGCGTCTGTTGGATTTAATAATTTTGAGGTCTCTCAAGAAAATAAAAGACCGGCAGCGTCTGTaGGATTTAATAATTTTGAGG +
Preference number: 5 (lower is better)
Translates to: DRQRLLDLIILRSLKKIKDRQRL*DLIILR
Trigger: CCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC...TTTTATTTTCTTGAGAGACCTCAAAATTATTAAATCCAACAGACGCTGCCGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS CCA 72 bp CCTGCGAGCCAAAGAGTCCCAACTCGAAGGCCGTGGTaGGCCGGTCGCTGTAGCGCACGACCCCCACACGGG +
Preference number: 6 (lower is better)
Translates to: PASQRVPTRRPW*AGRCSARPPHG
Trigger: CCCGTGTGGGGGTCGTGCGCTACAGCGACCGGCCCACCACGGCCTTCGAGTTGGGACTCTTTGGCTCGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS TCA 72 bp TCCTGTCCCTTGGCACCCGGTGGTCCAGTGGGTCCCTaGGGCCCCAATTCTCCAGGACGGCCCTGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: SCPLAPGGPVGP*GPNSPGRPCSP
Trigger: GGGACTGCAGGGCCGTCCTGGAGAATTGGGGCCTCAGGGACCCACTGGACCACCGGGTGCCAAGGGACAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS GCA 72 bp GTGGTCCGGAAGGGCCAGGAGGGCCAGCAACCCCAATaGCTGGGTCACCACGGCTGCCAGGAGAACCAGGGA +
Preference number: 6 (lower is better)
Translates to: VVRKGQEGQQPQ*LGHHGCQENQG
Trigger: TCCCTGGTTCTCCTGGCAGCCGTGGTGACCCAGGCATTGGGGTTGCTGGCCCTCCTGGCCCTTCCGGACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 72 bp CCTCCTGCGAGCCAAAGAGTCCCAACTCGAAGGCCGTaGTGGGCCGGTCGCTGTAGCGCACGACCCCCACAC +
Preference number: 6 (lower is better)
Translates to: PPASQRVPTRRP*WAGRCSARPPH
Trigger: GTGTGGGGGTCGTGCGCTACAGCGACCGGCCCACCACGGCCTTCGAGTTGGGACTCTTTGGCTCGCAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS CCA 72 bp TCCGGAAGGGCCAGGAGGGCCAGCAACCCCAATGCCTaGGTCACCACGGCTGCCAGGAGAACCAGGGATCCC +
Preference number: 6 (lower is better)
Translates to: SGRARRASNPNA*VTTAARRTRDP
Trigger: GGGATCCCTGGTTCTCCTGGCAGCCGTGGTGACCCAGGCATTGGGGTTGCTGGCCCTCCTGGCCCTTCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS GCA 72 bp GGCACCGACATGTCCGGGAGCACCGGGGTTTCCAGCTaGTCCAGGAGCCCCATGTGCACCTTCCTGTCCCTT +
Preference number: 6 (lower is better)
Translates to: GTDMSGSTGVSS*SRSPMCTFLSL
Trigger: AAGGGACAGGAAGGTGCACATGGGGCTCCTGGAGCAGCTGGAAACCCCGGTGCTCCCGGACATGTCGGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 72 bp GGTGATCCATTCTTGCCCGGTGGGCCCCTTGGTCCTTaGGGACCCTGTGGCCCAGTGGGTCCAGTGTCACCA +
Preference number: 6 (lower is better)
Translates to: GDPFLPGGPLGP*GPCGPVGPVSP
Trigger: TGGTGACACTGGACCCACTGGGCCACAGGGTCCCCAAGGACCAAGGGGCCCACCGGGCAAGAATGGATCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
ENST00000487854.1
CDS CAA 90 bp GGGAGGTCCTGGGAGGCCAGGATGTCCAGCTGGTCCTGTCTCCCCTaGAGGGCCAGGGATCCCAGGAAGTCCATCTTTAGCATAGCCAGG +
Preference number: 6 (lower is better)
Translates to: GRSWEARMSSWSCLP*RARDPRKSIFSIAR
Trigger: CCTGGCTATGCTAAAGATGGACTTCCTGGGATCCCTGGCCCTCAAGGGGAGACAGGACCAGCTGGACATCCTGGCCTCCCAGGACCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS GCA 72 bp TCCCTCGGAGACCTTGCAAACCAGGAGGTCCATCCCTaGCTTCTGGGCCTATTGGACCCCGAGCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: SLGDLANQEVHP*LLGLLDPELLE
Trigger: CTCCAGGAGCTCGGGGTCCAATAGGCCCAGAAGGCAGGGATGGACCTCCTGGTTTGCAAGGTCTCCGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS GCA 72 bp AAGCCCCATGGCACCAGACTTTACCCGGGGACCGGGTaGACCAGAATCGCCTGTGTGTCCCTTGAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: KPHGTRLYPGTG*TRIACVSLEAR
Trigger: CCTGGCTTCAAGGGACACACAGGCGATTCTGGTGCACCCGGTCCCCGGGTAAAGTCTGGTGCCATGGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487854.1
CDS CCA 72 bp TTCTCCTGGTTCTCCCTTGGTTCCTGGCGGACCTGGTaGTCCATTTGGCCCGTCCTTTCCAGGGGGTCCCGT +
Preference number: 6 (lower is better)
Translates to: FSWFSLGSWRTW*SIWPVLSRGSR
Trigger: ACGGGACCCCCTGGAAAGGACGGGCCAAATGGACCACCAGGTCCGCCAGGAACCAAGGGAGAACCAGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS CCA 72 bp GGGGGTCCAACTGGTCCATTCTCCCCAGGTAGTCCTTaGGGACCCATCAGGCCTGTGTGGCCTTTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: GGPTGPFSPGSP*GPIRPVWPLWP
Trigger: AGGCCACAAAGGCCACACAGGCCTGATGGGTCCCCAAGGACTACCTGGGGAGAATGGACCAGTTGGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 72 bp AGGGACCCTTCACATTACCCGGCCGGGCAGCAAGGCTaGCGAAGTAGGCACACTGGGAAGGGTCACATTGGC +
Preference number: 6 (lower is better)
Translates to: RDPSHYPAGQQG*RSRHTGKGHIG
Trigger: GCCAATGTGACCCTTCCCAGTGTGCCTACTTCGCCAGCCTTGCTGCCCGGCCGGGTAATGTGAAGGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CAA 90 bp GTGTGTGAGAAACAGAAGAACAGGGAAAGCGGAGAAGACACTTCCTaGGGGAGAAACGCCGCAGCCTCGGCCAGCCCCGCCACTGCCCAG +
Preference number: 6 (lower is better)
Translates to: VCEKQKNRESGEDTS*GRNAAASASPATAQ
Trigger: CTGGGCAGTGGCGGGGCTGGCCGAGGCTGCGGCGTTTCTCCCCAAGGAAGTGTCTTCTCCGCTTTCCCTGTTCTTCTGTTTCTCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000484387.1
CDS GCA 72 bp TCGATGGGTAGTGTCTGCACCAGCGCACAGTCAATGTaGAGGGAGACGTTCTGGGCCTGGATGCTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SMGSVCTSAQSM*RETFWAWMLRA
Trigger: GGCCCTGAGCATCCAGGCCCAGAACGTCTCCCTGCACATTGACTGTGCGCTGGTGCAGACACTACCCATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS CCA 72 bp TCTTTCTCCTGGTTCTCCCTTGGTTCCTGGCGGACCTaGTGGTCCATTTGGCCCGTCCTTTCCAGGGGGTCC +
Preference number: 6 (lower is better)
Translates to: SFSWFSLGSWRT*WSIWPVLSRGS
Trigger: GGACCCCCTGGAAAGGACGGGCCAAATGGACCACCAGGTCCGCCAGGAACCAAGGGAGAACCAGGAGAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS CAA 72 bp TGGGAGGCCAGGATGTCCAGCTGGTCCTGTCTCCCCTaGAGGGCCAGGGATCCCAGGAAGTCCATCTTTAGC +
Preference number: 6 (lower is better)
Translates to: WEARMSSWSCLP*RARDPRKSIFS
Trigger: GCTAAAGATGGACTTCCTGGGATCCCTGGCCCTCAAGGGGAGACAGGACCAGCTGGACATCCTGGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 72 bp TGGCTCCTATGTCTCCCTTTGGACCAGGGAGCCCCATaGGGCCAGCAACTCCCATTTCACCCTTCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: WLLCLPLDQGAP*GQQLPFHPSLQ
Trigger: CTGGAGAGAAGGGTGAAATGGGAGTTGCTGGCCCCATGGGGCTCCCTGGTCCAAAGGGAGACATAGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS CAA 90 bp TCAATGTGCAGGGAGACGTTCTGGGCCTGGATGCTCAGGGCCATCTaGTGCCAGTCCCGGTCAAAGAGGTCATTGACCCGAGAACCTCGG +
Preference number: 6 (lower is better)
Translates to: SMCRETFWAWMLRAI*CQSRSKRSLTREPR
Trigger: CCGAGGTTCTCGGGTCAATGACCTCTTTGACCGGGACTGGCACAAGATGGCCCTGAGCATCCAGGCCCAGAACGTCTCCCTGCACATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 72 bp CTCCAGGGGGACCCGGCTTTCCATCTCTGCCCTCTTTaGCTTCTTCTCCTGGGATTCCGGGTAATCCAGATG +
Preference number: 6 (lower is better)
Translates to: LQGDPAFHLCPL*LLLLGFRVIQM
Trigger: CATCTGGATTACCCGGAATCCCAGGAGAAGAAGGCAAAGAGGGCAGAGATGGAAAGCCGGGTCCCCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS GCA 72 bp TTCTCCCTGGGGTCCTGCCACAGCGTTGTACTCGACTaGCTTGTTTTCACCATCCAGCCGGATGGAGACCTG +
Preference number: 6 (lower is better)
Translates to: FSLGSCHSVVLD*LVFTIQPDGDL
Trigger: CAGGTCTCCATCCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCTGTGGCAGGACCCCAGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435777.2
CDS CAA 72 bp AGGGCCATCTTGTGCCAGTCCCGGTCAAAGAGGTCATaGACCCGAGAACCTCGGAAGACCACCCTGACAGCA +
Preference number: 6 (lower is better)
Translates to: RAILCQSRSKRS*TREPRKTTLTA
Trigger: TGCTGTCAGGGTGGTCTTCCGAGGTTCTCGGGTCAATGACCTCTTTGACCGGGACTGGCACAAGATGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS CAA 90 bp CCTCGGAAGACCACCCTGACAGCATCTTTCATGGCACCCACAGCGTaGTACTCGACTGCCTTGTTTTCACCATCCAGCCGGATGGAGACC +
Preference number: 6 (lower is better)
Translates to: PRKTTLTASFMAPTA*YSTALFSPSSRMET
Trigger: GGTCTCCATCCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCTGTGGGTGCCATGAAAGATGCTGTCAGGGTGGTCTTCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS TCA 72 bp GCCGGATGGAGACCTGTGGGATGCTGTACTGGTCGATaGCCTGCCAGATATACCAGTCTTCCTTCCGAGAGG +
Preference number: 6 (lower is better)
Translates to: AGWRPVGCCTGR*PARYTSLPSER
Trigger: CCTCTCGGAAGGAAGACTGGTATATCTGGCAGGTCATCGACCAGTACAGCATCCCACAGGTCTCCATCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS TCA 72 bp GGCTCTCCTGCTTTGCCCTACTGGCAGGGCGACCTGTaGCGTACACAGCCTTTTCCTCACCCCATCATCTTA +
Preference number: 6 (lower is better)
Translates to: GSPALPYWQGDL*RTQPFPHPIIL
Trigger: TAAGATGATGGGGTGAGGAAAAGGCTGTGTACGTCACAGGTCGCCCTGCCAGTAGGGCAAAGCAGGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487854.1
CDS TCA 72 bp GGTCCAGTGTCACCATCTTTTCCTGGTAACCCTTCCTaGCCAGGAAGCCCCATGGCACCAGACTTTACCCGG +
Preference number: 6 (lower is better)
Translates to: GPVSPSFPGNPS*PGSPMAPDFTR
Trigger: CCGGGTAAAGTCTGGTGCCATGGGGCTTCCTGGTCAGGAAGGGTTACCAGGAAAAGATGGTGACACTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487854.1
CDS CAA 90 bp TGGATGCTCAGGGCCATCTTGTGCCAGTCCCGGTCAAAGAGGTCATaGACCCGAGAACCTCGGAAGACCACCCTGACAGCATCTTTCATG +
Preference number: 6 (lower is better)
Translates to: WMLRAILCQSRSKRS*TREPRKTTLTASFM
Trigger: CATGAAAGATGCTGTCAGGGTGGTCTTCCGAGGTTCTCGGGTCAATGACCTCTTTGACCGGGACTGGCACAAGATGGCCCTGAGCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 72 bp GCACACTGTCGTAGAGGCGCTTGCCAATCACAGTCTTaGCCTGGATGTCAATGTTCTCCCGTTCCTCGATGG +
Preference number: 6 (lower is better)
Translates to: AHCRRGACQSQS*PGCQCSPVPRW
Trigger: CCATCGAGGAACGGGAGAACATTGACATCCAGGGCAAGACTGTGATTGGCAAGCGCCTCTACGACAGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 72 bp ATGACCCTGATCACCTTTCTGCCCAACCTCACCATCTaGACCACGTTCTCCTTGACTTCCCTGTGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: MTLITFLPNLTI*TTFSLTSLWSS
Trigger: GCTGGACCACAGGGAAGTCAAGGAGAACGTGGTGCAGATGGTGAGGTTGGGCAGAAAGGTGATCAGGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS CCA 72 bp CGGACTGTGTGCTGGTGGAGAGCTGTCCTACCTTCATaGGAACTGAAAGCTGTGGGATGCTGTACTGGTCGA +
Preference number: 6 (lower is better)
Translates to: RTVCWWRAVLPS*ELKAVGCCTGR
Trigger: TCGACCAGTACAGCATCCCACAGCTTTCAGTTCCCATGAAGGTAGGACAGCTCTCCACCAGCACACAGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS CAA 72 bp TCTTTCATGGCACCCACAGCGTTGTACTCGACTGCCTaGTTTTCACCATCCAGCCGGATGGAGACCTGTGGG +
Preference number: 6 (lower is better)
Translates to: SFMAPTALYSTA*FSPSSRMETCG
Trigger: CCCACAGGTCTCCATCCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCTGTGGGTGCCATGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS CAA 72 bp ACCACCCTGACAGCATCTTTCATGGCACCCACAGCGTaGTACTCGACTGCCTTGTTTTCACCATCCAGCCGG +
Preference number: 6 (lower is better)
Translates to: TTLTASFMAPTA*YSTALFSPSSR
Trigger: CCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCTGTGGGTGCCATGAAAGATGCTGTCAGGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS CAA 90 bp CTGACAGCATCTTTCATGGCACCCACAGCGTTGTACTCGACTGCCTaGTTTTCACCATCCAGCCGGATGGAGACCTGTGGGATGCTGTAC +
Preference number: 6 (lower is better)
Translates to: LTASFMAPTALYSTA*FSPSSRMETCGMLY
Trigger: GTACAGCATCCCACAGGTCTCCATCCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCTGTGGGTGCCATGAAAGATGCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS TCA 72 bp GGTGATGGTAACAGCAGATGGGGTTTTGGTGGCGGGTaGTTAGGTCTTGAGGGCAGAAAGCTCACGAATGGG +
Preference number: 6 (lower is better)
Translates to: GDGNSRWGFGGG*LGLEGRKLTNG
Trigger: CCCATTCGTGAGCTTTCTGCCCTCAAGACCTAATCACCCGCCACCAAAACCCCATCTGCTGTTACCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS GCA 72 bp AGCATCTTTCATGGCACCCACAGCGTTGTACTCGACTaGCTTGTTTTCACCATCCAGCCGGATGGAGACCTG +
Preference number: 6 (lower is better)
Translates to: SIFHGTHSVVLD*LVFTIQPDGDL
Trigger: CAGGTCTCCATCCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCTGTGGGTGCCATGAAAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 72 bp ATGTCAATGTTCTCCCGTTCCTCGATGGGTAGTGTCTaGACCAGCGCACAGTCAATGTGCAGGGAGACGTTC +
Preference number: 6 (lower is better)
Translates to: MSMFSRSSMGSV*TSAQSMCRETF
Trigger: GAACGTCTCCCTGCACATTGACTGTGCGCTGGTGCAGACACTACCCATCGAGGAACGGGAGAACATTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS CCA 72 bp TCTTGCCCTGGATGTCAATGTTCTCCCGTTCCTCGATaGGTAGTGTCTGCACCAGCGCACAGTCAATGTGCA +
Preference number: 6 (lower is better)
Translates to: SCPGCQCSPVPR*VVSAPAHSQCA
Trigger: TGCACATTGACTGTGCGCTGGTGCAGACACTACCCATCGAGGAACGGGAGAACATTGACATCCAGGGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS CAA 72 bp GGCGAGTCTGGTTTCAAGCTGCTTCCCCAGCTCTTCTaGAATAAGCCGACGCAGGGTTTCCATGGATGGAGA +
Preference number: 6 (lower is better)
Translates to: GESGFKLLPQLF*NKPTQGFHGWR
Trigger: TCTCCATCCATGGAAACCCTGCGTCGGCTTATTCAAGAAGAGCTGGGGAAGCAGCTTGAAACCAGACTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS TCA 72 bp TGGGAACTGAAAGCTGTGGGATGCTGTACTGGTCGATaGCCTGCCAGATATACCAGTCTTCCTTCCGAGAGG +
Preference number: 6 (lower is better)
Translates to: WELKAVGCCTGR*PARYTSLPSER
Trigger: CCTCTCGGAAGGAAGACTGGTATATCTGGCAGGTCATCGACCAGTACAGCATCCCACAGCTTTCAGTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS CCA 72 bp AGCTTCACCCTTTTCACCTCGGTCACCTTTCAGTCCTaGAAGTCCCAGTTCACCTTTTTCTCCCTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: SFTLFTSVTFQS*KSQFTFFSLVS
Trigger: GGAGACCAGGGAGAAAAAGGTGAACTGGGACTTCCAGGACTGAAAGGTGACCGAGGTGAAAAGGGTGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303045.11
ENST00000341807.8
ENST00000435777.2
CDS GCA 72 bp ATGGAGACCTGTGGGATGCTGTACTGGTCGATGACCTaGCAGATATACCAGTCTTCCTTCCGAGAGGTTTTC +
Preference number: 6 (lower is better)
Translates to: METCGMLYWSMT*QIYQSSFREVF
Trigger: GAAAACCTCTCGGAAGGAAGACTGGTATATCTGGCAGGTCATCGACCAGTACAGCATCCCACAGGTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS GCA 72 bp GGTCAAAGTCAATGGGCACACTGTCGTAGAGGCGCTTaGCAATCACAGTCTTGCCCTGGATGTCAATGTTCT +
Preference number: 6 (lower is better)
Translates to: GQSQWAHCRRGA*QSQSCPGCQCS
Trigger: AGAACATTGACATCCAGGGCAAGACTGTGATTGGCAAGCGCCTCTACGACAGTGTGCCCATTGACTTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS GCA 72 bp CGGACCCGAGGGGATATCACAACAAGTCTCCAATTCTaGGTGTCTCGAGTCACAATAGATCACAATCCGCTG +
Preference number: 6 (lower is better)
Translates to: RTRGDITTSLQF*VSRVTIDHNPL
Trigger: CAGCGGATTGTGATCTATTGTGACTCGAGACACGCAGAATTGGAGACTTGTTGTGATATCCCCTCGGGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303045.11
CDS CCA 72 bp AAGGTTGTGACAAAGGCGTACTCATCAGGTAAACCTTaGGGGAACACATCCCTTATCCTGCTTGGTGCCCTG +
Preference number: 6 (lower is better)
Translates to: KVVTKAYSSGKP*GNTSLILLGAL
Trigger: CAGGGCACCAAGCAGGATAAGGGATGTGTTCCCCCAAGGTTTACCTGATGAGTACGCCTTTGTCACAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS GCA 72 bp ACTGAAAGCTGTGGGATGCTGTACTGGTCGATGACCTaGCAGATATACCAGTCTTCCTTCCGAGAGGTTTTC +
Preference number: 6 (lower is better)
Translates to: TESCGMLYWSMT*QIYQSSFREVF
Trigger: GAAAACCTCTCGGAAGGAAGACTGGTATATCTGGCAGGTCATCGACCAGTACAGCATCCCACAGCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS CCA 72 bp AAGGTTGTGACAAAGGCGTACTCATCAGGTAAACCTTaGGGGAACACATCCTCAGTACTTTGCACCACAGGG +
Preference number: 6 (lower is better)
Translates to: KVVTKAYSSGKP*GNTSSVLCTTG
Trigger: CCCTGTGGTGCAAAGTACTGAGGATGTGTTCCCCCAAGGTTTACCTGATGAGTACGCCTTTGTCACAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303045.11
ENST00000435777.2
CDS CCA 72 bp TTCAGATTTCTCTTTCCTCACCGGACTGTGTGCTGGTaGAGAGCTGTCCTACCTTCATGGGAACTGAAAGCT +
Preference number: 6 (lower is better)
Translates to: FRFLFPHRTVCW*RAVLPSWELKA
Trigger: AGCTTTCAGTTCCCATGAAGGTAGGACAGCTCTCCACCAGCACACAGTCCGGTGAGGAAAGAGAAATCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS GCA 72 bp TTGAATTTCAGATTTCTCTTTCCTCACCGGACTGTGTaGTGGTGGAGAGCTGTCCTACCTTCATGGGAACTG +
Preference number: 6 (lower is better)
Translates to: LNFRFLFPHRTV*WWRAVLPSWEL
Trigger: CAGTTCCCATGAAGGTAGGACAGCTCTCCACCAGCACACAGTCCGGTGAGGAAAGAGAAATCTGAAATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS CCA 72 bp AATTTCAGATTTCTCTTTCCTCACCGGACTGTGTGCTaGTGGAGAGCTGTCCTACCTTCATGGGAACTGAAA +
Preference number: 6 (lower is better)
Translates to: NFRFLFPHRTVC*WRAVLPSWELK
Trigger: TTTCAGTTCCCATGAAGGTAGGACAGCTCTCCACCAGCACACAGTCCGGTGAGGAAAGAGAAATCTGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS CCA 72 bp GTGATCTTAAAGTGCCATTTCCTTTCTCCGGATCTCTaGATCTGTAAATTTGGGACAGTCCTCCCTTGTAGG +
Preference number: 6 (lower is better)
Translates to: VILKCHFLSPDL*ICKFGTVLPCR
Trigger: CCTACAAGGGAGGACTGTCCCAAATTTACAGATCCAGAGATCCGGAGAAAGGAAATGGCACTTTAAGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487854.1
CDS GCA 72 bp CTTGTCAGGACACTCTTGCTATTTAAAATTCTTTACTaGCCACAGCTTGGCATTGCCCTGTTCCCAAACCTT +
Preference number: 6 (lower is better)
Translates to: LVRTLLLFKILY*PQLGIALFPNL
Trigger: AAGGTTTGGGAACAGGGCAATGCCAAGCTGTGGGCAGTAAAGAATTTTAAATAGCAAGAGTGTCCTGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487854.1
CDS TCA 72 bp ACTAGGAGAGGAGAAAGAAACGGTTTGTCTATGACTTaGGAACAAGGGGATTTGGATTTGGCAGAGAACAAA +
Preference number: 6 (lower is better)
Translates to: TRRGERNGLSMT*EQGDLDLAENK
Trigger: TTTGTTCTCTGCCAAATCCAAATCCCCTTGTTCTCAAGTCATAGACAAACCGTTTCTTTCTCCTCTCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS TCA 72 bp TGGTCTGAATGTTGCTGTCTTCCTAAATCCATATGTTaGAATCTTCACACCAAGGTGATGGTAACAGCAGAT +
Preference number: 6 (lower is better)
Translates to: WSECCCLPKSIC*NLHTKVMVTAD
Trigger: ATCTGCTGTTACCATCACCTTGGTGTGAAGATTTCAACATATGGATTTAGGAAGACAGCAACATTCAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS TCA 72 bp ATTTTACTAGGAGAGGAGAAAGAAACGGTTTGTCTATaGCTTGAGAACAAGGGGATTTGGATTTGGCAGAGA +
Preference number: 6 (lower is better)
Translates to: ILLGEEKETVCL*LENKGIWIWQR
Trigger: TCTCTGCCAAATCCAAATCCCCTTGTTCTCAAGTCATAGACAAACCGTTTCTTTCTCCTCTCCTAGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS CAA 90 bp AGAACAAATAGTAGTGTTGCTTTTATCTCAAACCAACAGATGGTGTaGATGGCTTTGAATTTCAGATTTCTCTTTCCTCACCGGACTGTG +
Preference number: 6 (lower is better)
Translates to: RTNSSVAFISNQQMV*MALNFRFLFPHRTV
Trigger: CACAGTCCGGTGAGGAAAGAGAAATCTGAAATTCAAAGCCATCAACACCATCTGTTGGTTTGAGATAAAAGCAACACTACTATTTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517515.1
CDS CAA 72 bp AGTAGTGTTGCTTTTATCTCAAACCAACAGATGGTGTaGATGGCTTTGAATTTCAGATTTCTCTTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: SSVAFISNQQMV*MALNFRFLFPH
Trigger: GTGAGGAAAGAGAAATCTGAAATTCAAAGCCATCAACACCATCTGTTGGTTTGAGATAAAAGCAACACTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517515.1