RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL21A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124749

Ensembl transcript IDs: ENST00000244728.10, ENST00000370817.3, ENST00000370819.5, ENST00000456983.1, ENST00000467045.5, ENST00000469682.1, ENST00000488912.5, ENST00000535941.5

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTGCTCCTGGTTCTCCCTTGAGCCCAGAAGCCCCAGGCATCCCTTaGATTCCAGGTTCACCTTTGCTTCCCTTAGATCCCGGTGTTCCA +
Preference number: 1 (lower is better)
Translates to: VAPGSPLSPEAPGIP*IPGSPLLPLDPGVP
Trigger: TGGAACACCGGGATCTAAGGGAAGCAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR GCA 90 bp GGCCTGGTTGCCCTTGGATTCCAGGTTTTCCATGGTCTCCATCTTTaGCAGGGAGACCTGGGTCTCCTGGAGGACCTTCTTTGCTTATTC +
Preference number: 1 (lower is better)
Translates to: GLVALGFQVFHGLHL*QGDLGLLEDLLCLF
Trigger: GAATAAGCAAAGAAGGTCCTCCAGGAGACCCAGGTCTCCCTGGCAAAGATGGAGACCATGGAAAACCTGGAATCCAAGGGCAACCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR TCA 90 bp CAGGCAATCCACTGCCCCTTATCAAGGCTGAGACACTGTAGTAAATaGGTAGTTCACCAATACTGTCTATCCCAGGTGAATATCAGCCCT +
Preference number: 1 (lower is better)
Translates to: QAIHCPLSRLRHCSK*VVHQYCLSQVNISP
Trigger: AGGGCTGATATTCACCTGGGATAGACAGTATTGGTGAACTACTCATTTACTACAGTGTCTCAGCCTTGATAAGGGGCAGTGGATTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR TCA 90 bp CCTGGGGGACCAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTGCCCCAGGCATCCCTTaGATTCCAGGTTCACCTTTG +
Preference number: 2 (lower is better)
Translates to: PGGPGGPCSPGYPNPWLPAPGIP*IPGSPL
Trigger: CAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGC...AGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTGGTCCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR GCA 90 bp CATCTCTTCCTGGCAAACCAGGTAATCCTCTGGGACCCTCTGGGCCTCTTATTACCTGGATCCCCAGGTTaGCCCTTAGGACCTGCGGGC +
Preference number: 2 (lower is better)
Translates to: HLFLANQVILWDPLGLLLPGSPG*PLGPAG
Trigger: GCCCGCAGGTCCTAAGGGGCAACCTGGGGATCCAGG...TAATAAGAGGCCCAGAGGGTCCCAGAGGATTACCTGGTTTGCCAGGAAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR CAA 90 bp CGTTGCTCCTGGTTCTCCCTTGAGCCCAGAAGCCCCAGGCATCCCTaGAATTCCAGGTTCACCTTTGCTTCCCTTAGATCCCGGTGTTCC +
Preference number: 2 (lower is better)
Translates to: RCSWFSLEPRSPRHP*NSRFTFASLRSRCS
Trigger: GGAACACCGGGATCTAAGGGAAGCAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAGCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR TCA 90 bp GACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATTTCTTCCTCCTGGTTCTCCCTTaGGCCCAGAAGCCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: DLVLQDTQTLGSLFPHFFLLVLP*AQKPQA
Trigger: TGCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAG...GAAGAAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR TCA 90 bp GGGGACCAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTGCCCCTTATCAAGGCTaGGACACTGTAGTAAATGAG +
Preference number: 2 (lower is better)
Translates to: GDQEDLVLQDTQTLGSLFAPYQG*DTVVNE
Trigger: CTCATTTACTACAGTGTCTCAGCCTTGATAAGGGGC...AAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTGGTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CCA 90 bp CAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATTTTTCCTTGCTGTCCTaGAGGCCCAATTTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: QEDLVLQDTQTLGSLFPHFSLLS*RPNFSL
Trigger: AAGGGAGAAATTGGGCCTCCAGGACAGCAAGGAAAA...ATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR GCA 90 bp GACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATTTCTTCCAACAGGCAATCCACTaGCCCTTATCAAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: DLVLQDTQTLGSLFPHFFQQAIH*PLSRLR
Trigger: TCTCAGCCTTGATAAGGGGCAGTGGATTGCCTGTTG...GAAGAAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACCTCCTTTTGATCCAATaGCACCTCGGACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDLLLIQ*HLGHQV
Trigger: AACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAG...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CCA 90 bp CATCAGACACTAATAGTTTGGTCCTTTTCTGAACGGATCTCTTCTGGCAATTACGGGTCCCTGAGGACCTaGATCCCCAGGTTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: HQTLIVWSFSERISSGNYGSLRT*IPRLPL
Trigger: AAGGGGCAACCTGGGGATCCAGGTCCTCAGGGACCC...GTAATTGCCAGAAGAGATCCGTTCAGAAAAGGACCAAACTATTAGTGTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGAGACCTGGGTCTCCTaGAGGACCTTCTTTGCTTAT +
Preference number: 2 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDETWVS*RTFFAY
Trigger: ATAAGCAAAGAAGGTCCTCCAGGAGACCCAGGTCTC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR GCA 90 bp CAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATAACTCAAATCTCTACTaGATGGAGGCTGAATGTGAA +
Preference number: 2 (lower is better)
Translates to: QEDLVLQDTQTLGSLFPHNSNLY*MEAECE
Trigger: TTCACATTCAGCCTCCATGCAGTAGAGATTTGAGTT...ATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGTGACTAAAACTGACTaGCTAACAGGCAATGGTGGA +
Preference number: 2 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKVTKTD*LTGNGG
Trigger: TCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCAC...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTGTTGGTTATCTTCCTaGGATGCAAAAGACCACAGA +
Preference number: 2 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDCWLSS*DAKDHR
Trigger: TCTGTGGTCTTTTGCATCTCAGGAAGATAACCAACA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
3UTR-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCAGGGCTCCAAATGACTaGGGAGCCTTTAAAATCAGT +
Preference number: 2 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCRAPND*GAFKIS
Trigger: ACTGATTTTAAAGGCTCCTCAGTCATTTGGAGCCCT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
3UTR-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACCCAATTTCTCCCTTTTaGCCCATTAATCCTCGGTTT +
Preference number: 2 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDPISPF*PINPRF
Trigger: AAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGG...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGTTGGTTATCTTCCTaGGATGCAAAAGACCACAGA +
Preference number: 2 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCCWLSS*DAKDHR
Trigger: TCTGTGGTCTTTTGCATCTCAGGAAGATAACCAACA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
3UTR-3UTR TCA 90 bp GATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCCTTTTCACCTATACCTTTTTCACCTTaGTTTCCTTTGTCCCCCTTT +
Preference number: 2 (lower is better)
Translates to: DSPFDPMAPRTPGSPFSPIPFSP*FPLSPF
Trigger: AAAGGGGGACAAAGGAAATCAAGGTGAAAAAGGTAT...AGGTGAAAAGGGAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR GCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACAATCTTATTCAGAGGTaGTATTCACAACACCGAACA +
Preference number: 2 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDNLIQR*YSQHRT
Trigger: TGTTCGGTGTTGTGAATAGCACCTCTGAATAAGATT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR TCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCCCAGATTCTCCTTTTaGTCCAATGGCACCTCGGAC +
Preference number: 2 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTPRFSF*SNGTSD
Trigger: GTCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCAATCTTATTCAGAGGTaGTATTCACAACACCGAACA +
Preference number: 2 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCNLIQR*YSQHRT
Trigger: TGTTCGGTGTTGTGAATAGCACCTCTGAATAAGATT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR TCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAGGGCTCCAAATGACTaGGGAGCCTTTAAAATCAGT +
Preference number: 2 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRRAPND*GAFKIS
Trigger: ACTGATTTTAAAGGCTCCTCAGTCATTTGGAGCCCT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
3UTR-3UTR CCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTAGTGACTAAAACTGACTaGCTAACAGGCAATGGTGGA +
Preference number: 2 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVVTKTD*LTGNGG
Trigger: TCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCAC...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCTGTTGGTTATCTTCCTaGGATGCAAAAGACCACAGA +
Preference number: 2 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFCWLSS*DAKDHR
Trigger: TCTGTGGTCTTTTGCATCTCAGGAAGATAACCAACA...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
3UTR-3UTR GCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTAACTCAAATCTCTACTaGATGGAGGCTGAATGTGAA +
Preference number: 2 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTNSNLY*MEAECE
Trigger: TTCACATTCAGCCTCCATGCAGTAGAGATTTGAGTT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR TCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTAGACACTGTAGTAAATaGGTAGTTCACCAATACTGT +
Preference number: 2 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTRHCSK*VVHQYC
Trigger: ACAGTATTGGTGAACTACTCATTTACTACAGTGTCT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCGAAGACCACAGTTTGTaGAGAGACATAAAGAAGTAC +
Preference number: 2 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFEDHSL*RDIKKY
Trigger: GTACTTCTTTATGTCTCTTCACAAACTGTGGTCTTC...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTACAAATCTCTACTGCATaGAGGCTGAATGTGAAATAT +
Preference number: 2 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVQISTA*RLNVKY
Trigger: ATATTTCACATTCAGCCTCCATGCAGTAGAGATTTG...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCAGACACTGTAGTAAATaGGTAGTTCACCAATACTGT +
Preference number: 2 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFRHCSK*VVHQYC
Trigger: ACAGTATTGGTGAACTACTCATTTACTACAGTGTCT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR CCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCAAATCTCTACTGCATaGAGGCTGAATGTGAAATAT +
Preference number: 2 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFQISTA*RLNVKY
Trigger: ATATTTCACATTCAGCCTCCATGCAGTAGAGATTTG...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
3UTR-3UTR CAA 90 bp GATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCCTTTTCACCTGCTCCTGGTTCTCCCTaGAGCCCAGAAGCCCCAGGC +
Preference number: 3 (lower is better)
Translates to: DSPFDPMAPRTPGSPFSPAPGSP*SPEAPG
Trigger: GCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAGC...AGGTGAAAAGGGAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CAA 90 bp GACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATTTCTTCACCTGGATCCCCAGGTaGCCCCTTAGGACCTGCGGG +
Preference number: 3 (lower is better)
Translates to: DLVLQDTQTLGSLFPHFFTWIPR*PLRTCG
Trigger: CCCGCAGGTCCTAAGGGGCAACCTGGGGATCCAGGT...GAAGAAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR CCA 72 bp ATGGTCTCCATCTTTGCCAGGGAGACCTGGGTCTCCTaGAGGACCTTCTTTGCTTATTCCAGGAGGGCCCTC +
Preference number: 3 (lower is better)
Translates to: MVSIFARETWVS*RTFFAYSRRAL
Trigger: GAGGGCCCTCCTGGAATAAGCAAAGAAGGTCCTCCAGGAGACCCAGGTCTCCCTGGCAAAGATGGAGACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR TCA 72 bp GGTTCTCCCTTGAGCCCAGAAGCCCCAGGCATCCCTTaGATTCCAGGTTCACCTTTGCTTCCCTTAGATCCC +
Preference number: 3 (lower is better)
Translates to: GSPLSPEAPGIP*IPGSPLLPLDP
Trigger: GGGATCTAAGGGAAGCAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCTTCTGGGCTCAAGGGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR CCA 72 bp TCACCTTTGCTTCCCTTAGATCCCGGTGTTCCAGGCTaGCCTGGTGAGCCATTGCTTCCCATTAAACCAGGC +
Preference number: 3 (lower is better)
Translates to: SPLLPLDPGVPG*PGEPLLPIKPG
Trigger: GCCTGGTTTAATGGGAAGCAATGGCTCACCAGGCCAGCCTGGAACACCGGGATCTAAGGGAAGCAAAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CAA 90 bp GACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATTTCTTCATTCCAGGTTCACCTTaGCTTCCCTTAGATCCCGGT +
Preference number: 3 (lower is better)
Translates to: DLVLQDTQTLGSLFPHFFIPGSP*LPLDPG
Trigger: ACCGGGATCTAAGGGAAGCAAAGGTGAACCTGGAAT...GAAGAAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAGCCCCAGGCATCCCTaGAATTCCAGGTTCACCTTT +
Preference number: 3 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRSPRHP*NSRFTF
Trigger: AAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR TCA 72 bp CAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTaGATGAGGCATCAGACACTAATAGTTTGGTCCTTT +
Preference number: 3 (lower is better)
Translates to: QKTTEKAPCLGC*MRHQTLIVWSF
Trigger: AAAGGACCAAACTATTAGTGTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCCCCAGATTCTCCTTTaGATCCAATGGCACCTCGGA +
Preference number: 3 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFPQILL*IQWHLG
Trigger: TCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGGG...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488912.5
3UTR-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATTCAAGGGATTACTGTaGGTTATCTTCCTGAGATGC +
Preference number: 3 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRFKGLL*VIFLRC
Trigger: GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
3UTR-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCTTCAAGGGATTACTGTaGGTTATCTTCCTGAGATGC +
Preference number: 3 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFFKGLL*VIFLRC
Trigger: GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAA...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CCCTTAGATCCCGGTGTTCCAGGCTGGCCTGGTGAGCCATTGCTTCCCATTAAACTCCTGGTTCTCCCTTaGGCCCAGAAGCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PLDPGVPGWPGEPLLPIKLLVLP*AQKPQA
Trigger: TGCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAG...TTTAATGGGAAGCAATGGCTCACCAGGCCAGCCTGGAACACCGGGATCTAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp CCTGGGGGACCAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTCTGGAGGACCTTCTTTaGTTATTCCAGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PGGPGGPCSPGYPNPWLPLEDLL*LFQEGP
Trigger: AGGGCCCTCCTGGAATAAGCAAAGAAGGTCCTCCAG...AGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTGGTCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp CATCCACCCCAGATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCGGGTCCCTGAGGACCTaGATCCCCAGGTTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: HPPQILLLIQWHLGHQVLGSLRT*IPRLPL
Trigger: AAGGGGCAACCTGGGGATCCAGGTCCTCAGGGACCC...GAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGGGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGTCCAGGCTCGGGGTTaGCGTCGCAGCCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKVQARG*RRSQLS
Trigger: ACTCAGCTGGCTGCGACGGCAACCCCGAGCCTGGAC...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR GCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACCCCCGTGTTCCATCCTaGCCCGGAGCACCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDPRVPS*PGAPGD
Trigger: ATCCCCTGGTGCTCCGGGGCAGGATGGAACACGGGG...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATTTCTTCCCCCGTGTTCCATCCTaGCCCGGAGCACCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: DLVLQDTQTLGSLFPHFFPRVPS*PGAPGD
Trigger: ATCCCCTGGTGCTCCGGGGCAGGATGGAACACGGGG...GAAGAAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACCCTGGATCCCCAGGTTaGCCCTTAGGACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDPGSPG*PLGPAG
Trigger: GCCCGCAGGTCCTAAGGGGCAACCTGGGGATCCAGG...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCGGGTCCCTGAGGACCTaGATCCCCAGGTTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGGSLRT*IPRLPL
Trigger: AAGGGGCAACCTGGGGATCCAGGTCCTCAGGGACCC...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGCTCCTGGTTCTCCCTTaGGCCCAGAAGCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKLLVLP*AQKPQA
Trigger: TGCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAG...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACAAACCTGGGGGTCCCTaGGGACCTGGATCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDKPGGP*GPGSPG
Trigger: ACCTGGGGATCCAGGTCCTCAGGGACCCCCAGGTTT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GGGGACCAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTGGCCTTTTAATCCTCTaGCACCTGGACGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GDQEDLVLQDTQTLGSLFGLLIL*HLDVQG
Trigger: TCCCTGGACGTCCAGGTGTCAGAGGATTAAAAGGCC...AAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTGGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCAAACCTGGGGGTCCCTaGGGACCTGGATCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCKPGGP*GPGSPG
Trigger: ACCTGGGGATCCAGGTCCTCAGGGACCCCCAGGTTT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp CCTGGGGGACCAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTACCTCTCTCTCCTTTTaGACCATGATGGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PGGPGGPCSPGYPNPWLPTSLSF*TMMALN
Trigger: ATTCAAGGCCATCATGGTGCAAAAGGAGAGAGAGGT...AGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTGGTCCCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCGCCTATCGGACCAGGTaGCCCAGGAATACCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCAYRTR*PRNTRG
Trigger: TCCCCGGGTATTCCTGGGCCACCTGGTCCGATAGGC...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
3UTR CAA 72 bp TGGTTCTCCCTTGAGCCCAGAAGCCCCAGGCATCCCTaGAATTCCAGGTTCACCTTTGCTTCCCTTAGATCC +
Preference number: 4 (lower is better)
Translates to: WFSLEPRSPRHP*NSRFTFASLRS
Trigger: GGATCTAAGGGAAGCAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCTTCTGGGCTCAAGGGAGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCTCCTGGTTCTCCCTTaGGCCCAGAAGCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGLLVLP*AQKPQA
Trigger: TGCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CATCCACCCCAGATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCCCAGATTCTCCTTTTaGTCCAATGGCACCTCGGAC +
Preference number: 4 (lower is better)
Translates to: HPPQILLLIQWHLGHQVLPRFSF*SNGTSD
Trigger: GTCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGG...GAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGGGTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCAGCCAGCTGAGTGTTaGGCCAGGGGGACAGGTATG +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCQPAEC*ARGTGM
Trigger: CATACCTGTCCCCCTGGCGCAACACTCAGCTGGCTG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR GCA 90 bp GCCCAATTTCTCCCTTTTGGCCCATTAATCCTCGGTTTCCAGGAAATCCTGGGAAGCACCAGGGGATCCTaGTTCTCCCTTGAAACCGGG +
Preference number: 4 (lower is better)
Translates to: AQFLPFGPLILGFQEILGSTRGS*FSLETG
Trigger: CCCGGTTTCAAGGGAGAAGCAGGATCCCCTGGTGCT...TCCCAGGATTTCCTGGAAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp CAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATGGCCTGGTGAGCCATTaGTTCCCATTAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: QEDLVLQDTQTLGSLFPHGLVSH*FPLNQA
Trigger: TGCCTGGTTTAATGGGAAGCAATGGCTCACCAGGCC...ATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTCCTGGGGAACCCGTTaGTCCTGGTTCTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDSWGTR*SWFSLE
Trigger: CTCAAGGGAGAACCAGGAGCAACGGGTTCCCCAGGA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCCTTTTCACCTGGAACCCGTTGCTCCTaGTTCTCCCTTGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: DSPFDPMAPRTPGSPFSPGTRCS*FSLEPR
Trigger: TCTGGGCTCAAGGGAGAACCAGGAGCAACGGGTTCC...AGGTGAAAAGGGAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGGAACCCGTTGCTCCTaGTTCTCCCTTGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDGTRCS*FSLEPR
Trigger: TCTGGGCTCAAGGGAGAACCAGGAGCAACGGGTTCC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGTATCCTGGTTCTCCTaGGGAACCCGTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKVSWFS*GTRCSW
Trigger: CCAGGAGCAACGGGTTCCCCAGGAGAACCAGGATAC...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGTATCCTGGTTCTCCTaGGGAACCCGTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDVSWFS*GTRCSW
Trigger: CCAGGAGCAACGGGTTCCCCAGGAGAACCAGGATAC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCGCCTATCGGACCAGGTaGCCCAGGAATACCCGGGGA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGAYRTR*PRNTRG
Trigger: TCCCCGGGTATTCCTGGGCCACCTGGTCCGATAGGC...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCGGGCCTGGTTGCCCTTaGATTCCAGGTTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGGPGCP*IPGFPW
Trigger: CCATGGAAAACCTGGAATCCAAGGGCAACCAGGCCC...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp CCCTTAGATCCCGGTGTTCCAGGCTGGCCTGGTGAGCCATTGCTTCCCATTAAATCCTCTGGGACCCTCTaGGCCTCTTATTACATCTGT +
Preference number: 4 (lower is better)
Translates to: PLDPGVPGWPGEPLLPIKSSGTL*ASYYIC
Trigger: ACAGATGTAATAAGAGGCCCAGAGGGTCCCAGAGGA...TTTAATGGGAAGCAATGGCTCACCAGGCCAGCCTGGAACACCGGGATCTAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGCCGTCGCAGCCAGCTaGGTGTTGCGCCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCAVAAS*VLRQGD
Trigger: GTCCCCCTGGCGCAACACTCAGCTGGCTGCGACGGC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTCACCTTTGGGGCCTTaGAGTCCTGGTTTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDSPLGP*SPGFPG
Trigger: TCCGGGAAAACCAGGACTTCAAGGCCCCAAAGGTGA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGCCCCAGGCATCCCTTaGATTCCAGGTTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDAPGIP*IPGSPL
Trigger: CAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCCCCAGGCATCCCTTaGATTCCAGGTTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKAPGIP*IPGSPL
Trigger: CAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGC...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCGGGGCCTTGAAGTCCTaGTTTTCCCGGAGGACAAAT +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGGALKS*FSRRTN
Trigger: ATTTGTCCTCCGGGAAAACCAGGACTTCAAGGCCCC...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCAGATCCTGGAACACCTaGTGTCCCTGCAATTCCCTG +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGRSWNT*CPCNSL
Trigger: CAGGGAATTGCAGGGACACCAGGTGTTCCAGGATCT...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCGTCACCATCTCGCCCTaGTTCTCCTTTGTAACCTGG +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGVTISP*FSFVTW
Trigger: CCAGGTTACAAAGGAGAACCAGGGCGAGATGGTGAC...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCCTTTCCATGTCTTCCTaGTTCTCCAGCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGLSMSS*FSSRSR
Trigger: CCTGGACCTGCTGGAGAACCAGGAAGACATGGAAAG...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCGGAACCCGTTGCTCCTaGTTCTCCCTTGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCGTRCS*FSLEPR
Trigger: TCTGGGCTCAAGGGAGAACCAGGAGCAACGGGTTCC...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCATCCTGCTTCTCCCTTaGAACCGGGACTACCCATTA +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGILLLP*NRDYPL
Trigger: TAATGGGTAGTCCCGGTTTCAAGGGAGAAGCAGGAT...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp GACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATTTCTTCCCATGCCTAGGCTGCTaGATGAGGCATCAGACACTA +
Preference number: 4 (lower is better)
Translates to: DLVLQDTQTLGSLFPHFFPCLGC*MRHQTL
Trigger: TAGTGTCTGATGCCTCATTCAGCAGCCTAGGCATGG...GAAGAAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGCTGGAGGACCTTCTTTaGTTATTCCAGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKLEDLL*LFQEGP
Trigger: AGGGCCCTCCTGGAATAAGCAAAGAAGGTCCTCCAG...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR GCA 90 bp GCCCAATTTCTCCCTTTTGGCCCATTAATCCTCGGTTTCCAGGAAATCCTGGGAGTGGCTGAACTCATATaGACATGTAGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: AQFLPFGPLILGFQEILGVAELI*TCRLSP
Trigger: CGGGGAGAGCCTACATGTGCATATGAGTTCAGCCAC...TCCCAGGATTTCCTGGAAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACCGAGCGCAAACTGGATaGCCTTCCCTGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDRAQTG*PSLSLC
Trigger: ACACAAAGACAGGGAAGGCCATCCAGTTTGCGCTCG...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGGGGCCTTGAAGTCCTaGTTTTCCCGGAGGACAAAT +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKGALKS*FSRRTN
Trigger: ATTTGTCCTCCGGGAAAACCAGGACTTCAAGGCCCC...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGTCACCATCTCGCCCTaGTTCTCCTTTGTAACCTGG +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDVTISP*FSFVTW
Trigger: CCAGGTTACAAAGGAGAACCAGGGCGAGATGGTGAC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCCTTTTCACCTCTTTCCATGTCTTCCTaGTTCTCCAGCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DSPFDPMAPRTPGSPFSPLSMSS*FSSRSR
Trigger: CCTGGACCTGCTGGAGAACCAGGAAGACATGGAAAG...AGGTGAAAAGGGAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCGGAACCCGTTGCTCCTaGTTCTCCCTTGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGGTRCS*FSLEPR
Trigger: TCTGGGCTCAAGGGAGAACCAGGAGCAACGGGTTCC...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp CATCTCTTCCTGGCAAACCAGGTAATCCTCTGGGACCCTCTGGGCCTCTTATTAGAGACCTGGGTCTCCTaGAGGACCTTCTTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: HLFLANQVILWDPLGLLLETWVS*RTFFAY
Trigger: ATAAGCAAAGAAGGTCCTCCAGGAGACCCAGGTCTC...TAATAAGAGGCCCAGAGGGTCCCAGAGGATTACCTGGTTTGCCAGGAAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp AGCCCCAGGCATCCCTTGAATTCCAGGTTCACCTTTGCTTCCCTTAGATCCCGGGTGACTAAAACTGACTaGCTAACAGGCAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: SPRHPLNSRFTFASLRSRVTKTD*LTGNGG
Trigger: TCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCAC...CCGGGATCTAAGGGAAGCAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACAACCAGGTAATCCTCTaGGACCCTCTGGGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDNQVIL*DPLGLL
Trigger: TAAGAGGCCCAGAGGGTCCCAGAGGATTACCTGGTT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCCGTCAAATGTTCTCCTaGATCATAGCTTCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGRQMFS*IIASER
Trigger: CCTCTCGGAAGCTATGATTCAGGAGAACATTTGACG...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACCTTGAGCTGCATCCTTaGCGTCATCTTGGGATTTGC +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDLELHP*RHLGIC
Trigger: GCAAATCCCAAGATGACGTCAAGGATGCAGCTCAAG...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCACAGGGAGCTGGAGTTaGACCTACATCACTGGGACC +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGTGSWS*TYITGT
Trigger: GGTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAAACAGGGAGCTGGAGTTaGACCTACATCACTGGGACC +
Preference number: 4 (lower is better)
Translates to: PLRRVNRANCSNAGLELQTGSWS*TYITGT
Trigger: GGTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGT...TTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCGGCCTTTTAATCCTCTaGCACCTGGACGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGGLLIL*HLDVQG
Trigger: TCCCTGGACGTCCAGGTGTCAGAGGATTAAAAGGCC...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CATCCACCCCAGATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCAGTTTGGTCCTTTTCTaGACGGATCTCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HPPQILLLIQWHLGHQVLSLVLF*TDLFWQ
Trigger: TTGCCAGAAGAGATCCGTTCAGAAAAGGACCAAACT...GAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGGGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp CATCCACCCCAGATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCAGGGCTCCAAATGACTaGGGAGCCTTTAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: HPPQILLLIQWHLGHQVLRAPND*GAFKIS
Trigger: ACTGATTTTAAAGGCTCCTCAGTCATTTGGAGCCCT...GAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGGGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCCCTGGATCCCCAGGTTaGCCCTTAGGACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCPGSPG*PLGPAG
Trigger: GCCCGCAGGTCCTAAGGGGCAACCTGGGGATCCAGG...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCGTCCAGGGTCACCTTTaGGGCCTTGAAGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGVQGHL*GLEVLV
Trigger: AACCAGGACTTCAAGGCCCCAAAGGTGACCCTGGAC...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGGGTCGCAGATGCCTaGGGGGCCTGGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRWVADA*GAWLPL
Trigger: CAAGGGCAACCAGGCCCCCCAGGCATCTGCGACCCA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCTTGAGCTGCATCCTTaGCGTCATCTTGGGATTTGC +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCLELHP*RHLGIC
Trigger: GCAAATCCCAAGATGACGTCAAGGATGCAGCTCAAG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACTCCTGGTTCTCCCTTaGGCCCAGAAGCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRLLVLP*AQKPQA
Trigger: TGCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCCCAGATTCTCCTTTTaGTCCAATGGCACCTCGGAC +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGPRFSF*SNGTSD
Trigger: GTCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCAAACCTGGGGGTCCCTaGGGACCTGGATCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCKPGGP*GPGSPG
Trigger: ACCTGGGGATCCAGGTCCTCAGGGACCCCCAGGTTT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAAACCTGGGGGTCCCTaGGGACCTGGATCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRKPGGP*GPGSPG
Trigger: ACCTGGGGATCCAGGTCCTCAGGGACCCCCAGGTTT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CCCTTAGATCCCGGTGTTCCAGGCTGGCCTGGTGAGCCATTGCTTCCCATTAAATCGAATAAATTGTTCTaGAAACTCTCTTCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: PLDPGVPGWPGEPLLPIKSNKLF*KLSSGL
Trigger: AAGCCCGGAAGAGAGTTTTCAGAACAATTTATTCGA...TTTAATGGGAAGCAATGGCTCACCAGGCCAGCCTGGAACACCGGGATCTAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGAGTATGGATTCCACTaGTGCCGTCAAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDEYGFH*CRQMFS
Trigger: GGAGAACATTTGACGGCAGCAGTGGAATCCATACTC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCCTTTCATCACGAGCTaGCACTGGAATTCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCPFITS*HWNSCW
Trigger: CCAACACGAATTCCAGTGGCAGCTCGTGATGAAAGG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTCCAGGAATCTCACATaGTGTCTCCCGGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCSRNLT*CLPVVL
Trigger: CAGAACAACCGGGAGACAGCATGTGAGATTCCTGGA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCAACACCTGGTGTCCCTaGAATTCCCTGATATCCAGG +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCNTWCP*NSLISR
Trigger: CCTGGATATCAGGGAATTGCAGGGACACCAGGTGTT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCCCCGTGTTCCATCCTaGCCCGGAGCACCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTPRVPS*PGAPGD
Trigger: ATCCCCTGGTGCTCCGGGGCAGGATGGAACACGGGG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTACCTGGATCCCCAGGTTaGCCCTTAGGACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVPGSPG*PLGPAG
Trigger: GCCCGCAGGTCCTAAGGGGCAACCTGGGGATCCAGG...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCAACAGGCAATCCACTaGCCCTTATCAAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCQQAIH*PLSRLR
Trigger: TCTCAGCCTTGATAAGGGGCAGTGGATTGCCTGTTG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR GCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCAACTCATGTGGTGGCTaGAGGTTGAGAGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGNSCGG*RLREAP
Trigger: GGGAGCTTCTCTCAACCTGCAGCCACCACATGAGTT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370819.5
CDS-3UTR CCA 90 bp CCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAAAGATCCTGGAACACCTaGTGTCCCTGCAATTCCCTG +
Preference number: 4 (lower is better)
Translates to: PLRRVNRANCSNAGLELQRSWNT*CPCNSL
Trigger: CAGGGAATTGCAGGGACACCAGGTGTTCCAGGATCT...TTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCGTCACCATCTCGCCCTaGTTCTCCTTTGTAACCTGG +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGVTISP*FSFVTW
Trigger: CCAGGTTACAAAGGAGAACCAGGGCGAGATGGTGAC...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCTTTCCATGTCTTCCTaGTTCTCCAGCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGLSMSS*FSSRSR
Trigger: CCTGGACCTGCTGGAGAACCAGGAAGACATGGAAAG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTTTTCCTTGCTGTCCTaGAGGCCCAATTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDFSLLS*RPNFSL
Trigger: AAGGGAGAAATTGGGCCTCCAGGACAGCAAGGAAAA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GCCCAATTTCTCCCTTTTGGCCCATTAATCCTCGGTTTCCAGGAAATCCTGGGATTTTCCTTGCTGTCCTaGAGGCCCAATTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AQFLPFGPLILGFQEILGFSLLS*RPNFSL
Trigger: AAGGGAGAAATTGGGCCTCCAGGACAGCAAGGAAAA...TCCCAGGATTTCCTGGAAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATCCTCTGGGACCCTCTaGGCCTATCGGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRSSGTL*AYRTRW
Trigger: CCACCTGGTCCGATAGGCCCAGAGGGTCCCAGAGGA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCTCCTCTGGGACCCTCTaGGCCTATCGGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCSSGTL*AYRTRW
Trigger: CCACCTGGTCCGATAGGCCCAGAGGGTCCCAGAGGA...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCGAGACCTGGGTCTCCTaGAGGACCTTCTTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCETWVS*RTFFAY
Trigger: ATAAGCAAAGAAGGTCCTCCAGGAGACCCAGGTCTC...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTTGGGTCGCAGATGCCTaGGGGGCCTGGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTWVADA*GAWLPL
Trigger: CAAGGGCAACCAGGCCCCCCAGGCATCTGCGACCCA...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAGAGCAAGACCTGCGCTaGAACGGATTGGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLREQDLR*NGLAAL
Trigger: GAGGGCAGCCAATCCGTTTCAGCGCAGGTCTTGCTC...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR TCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGAGCAGTACGACAACTTaGTCTTACTTCCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKSSTTT*SYFPIF
Trigger: GAAGATGGGGAAGTAAGATCAAGTTGTCGTACTGCT...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCTATCTCTTGCTGCTTaGGCTGCATCCTTGACGTCA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGLSLAA*AASLTS
Trigger: TGACGTCAAGGATGCAGCTCAAGCAGCAAGAGATAG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCTTTGGGTTTGCCCATTaGTCAAGATCCCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGFGFAH*SRSLKL
Trigger: CAGTTTTAGGGATCTTGATCAATGGGCAAACCCAAA...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCGCCATAAAATCCAGGTaGTCCTTTGTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCAIKSR*SFVSFG
Trigger: GCCAAAGGAGACAAAGGATCACCTGGATTTTATGGC...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCATCCTGCTTCTCCCTTaGAACCGGGACTACCCATTA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGILLLP*NRDYPL
Trigger: TAATGGGTAGTCCCGGTTTCAAGGGAGAAGCAGGAT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGAGGGCTCCAAATGACTaGGGAGCCTTTAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKRAPND*GAFKIS
Trigger: ACTGATTTTAAAGGCTCCTCAGTCATTTGGAGCCCT...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACACTGTCTATCCCAGGTaGATATCAGCCCTGATCTTA +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDTVYPR*ISALIL
Trigger: TAAGATCAGGGCTGATATTCACCTGGGATAGACAGT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp GCCCAATTTCTCCCTTTTGGCCCATTAATCCTCGGTTTCCAGGAAATCCTGGGAACTGTCTATCCCAGGTaGATATCAGCCCTGATCTTA +
Preference number: 4 (lower is better)
Translates to: AQFLPFGPLILGFQEILGTVYPR*ISALIL
Trigger: TAAGATCAGGGCTGATATTCACCTGGGATAGACAGT...TCCCAGGATTTCCTGGAAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp AATCCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGTATCCTTTGGGGCCTTaGAGTCCTGGTTTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: NPLRRVNRANCSNAGLELYPLGP*SPGFPG
Trigger: TCCGGGAAAACCAGGACTTCAAGGCCCCAAAGGATA...CAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR GCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTACCCTGCAGCGGCCAGTaGAGAGCTCAGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVPCSGQ*RAQRLR
Trigger: TCTGAGCCTCTGAGCTCTGCACTGGCCGCTGCAGGG...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR GCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTGGAGTCCGTTCTCCCTaGAGCGGCCAGTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTGVRSP*SGQCRA
Trigger: AGCTCTGCACTGGCCGCTGCAGGGAGAACGGACTCC...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR GCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAGTCCAGGCTCGGGGTTaGCGTCGCAGCCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLVQARG*RRSQLS
Trigger: ACTCAGCTGGCTGCGACGGCAACCCCGAGCCTGGAC...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000535941.5
CDS-3UTR GCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCCTTTGATCCTGGCATaGCATGAAGCCCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGPLILA*HEAQEN
Trigger: GTTTTCCTGGGCTTCATGGCATGCCAGGATCAAAGG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACCCCGTGTTCCATCCTaGCCCGGAGCACCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLPRVPS*PGAPGD
Trigger: ATCCCCTGGTGCTCCGGGGCAGGATGGAACACGGGG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACACCTCTCTCTCCTTTTaGACCATGATGGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDTSLSF*TMMALN
Trigger: ATTCAAGGCCATCATGGTGCAAAAGGAGAGAGAGGT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCAACAGGCAATCCACTaGCCCTTATCAAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGQQAIH*PLSRLR
Trigger: TCTCAGCCTTGATAAGGGGCAGTGGATTGCCTGTTG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR GCA 90 bp AGCCCCAGGCATCCCTTGAATTCCAGGTTCACCTTTGCTTCCCTTAGATCCCGGAATCTTATTCAGAGGTaGTATTCACAACACCGAACA +
Preference number: 4 (lower is better)
Translates to: SPRHPLNSRFTFASLRSRNLIQR*YSQHRT
Trigger: TGTTCGGTGTTGTGAATAGCACCTCTGAATAAGATT...CCGGGATCTAAGGGAAGCAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTTGCGCTGAAACGGATTaGCTGCCCTCCGCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTCAETD*LPSARS
Trigger: ACTCCGGGCGGAGGGCAGCCAATCCGTTTCAGCGCA...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR CCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGAAATCGTGAGGACTTaGCAAAAAGGTAATCGAGCG +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDEIVRT*QKGNRA
Trigger: CGCTCGATTACCTTTTTGCCAAGTCCTCACGATTTC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCCACTGGAATTCGTGTTaGACAGACAGATTCTTCACA +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGHWNSC*TDRFFT
Trigger: TGTGAAGAATCTGTCTGTCCAACACGAATTCCAGTG...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCATCACGAGCTGCCACTaGAATTCGTGTTGGACAGAC +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGITSCH*NSCWTD
Trigger: GTCTGTCCAACACGAATTCCAGTGGCAGCTCGTGAT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCAGCTCCTTGTATTCCTaGAGATCCTGGAACACCTGG +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGSSLYS*RSWNTW
Trigger: CCAGGTGTTCCAGGATCTCCAGGAATACAAGGAGCT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AATCCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGGTCACCATCTCGCCCTaGTTCTCCTTTGTAACCTGG +
Preference number: 4 (lower is better)
Translates to: NPLRRVNRANCSNAGLELVTISP*FSFVTW
Trigger: CCAGGTTACAAAGGAGAACCAGGGCGAGATGGTGAC...CAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTGGGTCCCTGAGGACCTaGATCCCCAGGTTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTGSLRT*IPRLPL
Trigger: AAGGGGCAACCTGGGGATCCAGGTCCTCAGGGACCC...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCGGATACCCAAACCCTTaGCTCCCTTTTTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCGYPNP*LPFSPF
Trigger: AAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCC...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATGGGTCGCAGATGCCTaGGGGGCCTGGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLWVADA*GAWLPL
Trigger: CAAGGGCAACCAGGCCCCCCAGGCATCTGCGACCCA...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCTGGGTCGCAGATGCCTaGGGGGCCTGGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFWVADA*GAWLPL
Trigger: CAAGGGCAACCAGGCCCCCCAGGCATCTGCGACCCA...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCCTTTTCACCTGGTCACTCTTTCACGTaGCTGAACTCATATGCACAT +
Preference number: 4 (lower is better)
Translates to: DSPFDPMAPRTPGSPFSPGHSFT*LNSYAH
Trigger: ATGTGCATATGAGTTCAGCCACGTGAAAGAGTGACC...AGGTGAAAAGGGAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCAGCAGTACGACAACTTaGTCTTACTTCCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCSSTTT*SYFPIF
Trigger: GAAGATGGGGAAGTAAGATCAAGTTGTCGTACTGCT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACCTTAGTCAGAAATCGTaGGGACTTGGCAAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDLSQKS*GLGKKV
Trigger: TACCTTTTTGCCAAGTCCTCACGATTTCTGACTAAG...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGGCATCTTCTGTTTCTaGACCAACACCAATAGCAAA +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDGIFCF*TNTNSK
Trigger: TTTGCTATTGGTGTTGGTTCAGAAACAGAAGATGCC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGAAAGGTAACCACTTGTaGGCCATTAATTACGCTGGT +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKKGNHL*AINYAG
Trigger: ACCAGCGTAATTAATGGCTCACAAGTGGTTACCTTT...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTTTGGGTTTGCCCATTaGTCAAGATCCCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDFGFAH*SRSLKL
Trigger: CAGTTTTAGGGATCTTGATCAATGGGCAAACCCAAA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AATCCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGACCCATTTCACCCTTTaGTCCTGGCATGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: NPLRRVNRANCSNAGLELTHFTL*SWHAMK
Trigger: CTTCATGGCATGCCAGGATCAAAGGGTGAAATGGGT...CAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR TCA 90 bp CCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAAGCCATAAAATCCAGGTaGTCCTTTGTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PLRRVNRANCSNAGLELQAIKSR*SFVSFG
Trigger: GCCAAAGGAGACAAAGGATCACCTGGATTTTATGGC...TTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCGCCATAAAATCCAGGTaGTCCTTTGTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGAIKSR*SFVSFG
Trigger: GCCAAAGGAGACAAAGGATCACCTGGATTTTATGGC...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACTGAAACGGATTGGCTaGCCTCCGCCCGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLLKRIG*PPPGVR
Trigger: ACGGACTCCGGGCGGAGGGCAGCCAATCCGTTTCAG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCTTACTATCTCTTGCTaGTTGAGCTGCATCCTTGAC +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCLTISC*LSCILD
Trigger: GTCAAGGATGCAGCTCAAGCAGCAAGAGATAGTAAG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACAAGAGACGAATTTGGTaGCAGCCTTCATCAAACAAC +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDKRRIW*QPSSNN
Trigger: GTTGTTTGATGAAGGCTGGCACCAAATTCGTCTCTT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCTTTCCAATTTGGGTTTaGCCATTGATCAAGATCCCT +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGFPIWV*PLIKIP
Trigger: AGGGATCTTGATCAATGGGCAAACCCAAATTGGAAA...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR GCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCAGCACCAGGGGATCCTaGTTCTCCCTTGAAACCGGG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCSTRGS*FSLETG
Trigger: CCCGGTTTCAAGGGAGAAGCAGGATCCCCTGGTGCT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCAACTCAAATCTCTACTaGATGGAGGCTGAATGTGAA +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGNSNLY*MEAECE
Trigger: TTCACATTCAGCCTCCATGCAGTAGAGATTTGAGTT...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTCCTTGACGTCATCTTaGGATTTGCCATCCGTAAGT +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCSLTSS*DLPSVS
Trigger: ACTTACGGATGGCAAATCCCAAGATGACGTCAAGGA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGACTAAGAGACGAATTTaGTGCCAGCCTTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKTKRRI*CQPSSN
Trigger: GTTTGATGAAGGCTGGCACCAAATTCGTCTCTTAGT...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCCGGTTGTTCTGTTCTaGGTCACAGTAGATTCGCAA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGPVVLF*VTVDSQ
Trigger: TTGCGAATCTACTGTGACCCAGAACAGAACAACCGG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp CTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAATTCGGGGCCTTGAAGTCCTaGTTTTCCCGGAGGACAAAT +
Preference number: 4 (lower is better)
Translates to: LRRVNRANCSNAGLELQFGALKS*FSRRTN
Trigger: ATTTGTCCTCCGGGAAAACCAGGACTTCAAGGCCCC...GAATTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAGGGTCCCTGAGGACCTaGATCCCCAGGTTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLGSLRT*IPRLPL
Trigger: AAGGGGCAACCTGGGGATCCAGGTCCTCAGGGACCC...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATCCTCTGGGACCCTCTaGGCCTATCGGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLSSGTL*AYRTRW
Trigger: CCACCTGGTCCGATAGGCCCAGAGGGTCCCAGAGGA...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCCAGACACTAATAGTTTaGTCCTTTTCTGAACGGATC +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGQTLIV*SFSERI
Trigger: GATCCGTTCAGAAAAGGACCAAACTATTAGTGTCTG...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCGTGACTAAAACTGACTaGCTAACAGGCAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCVTKTD*LTGNGG
Trigger: TCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCAC...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp CATCCACCCCAGATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCAAATCTCTACTGCATaGAGGCTGAATGTGAAATAT +
Preference number: 4 (lower is better)
Translates to: HPPQILLLIQWHLGHQVLQISTA*RLNVKY
Trigger: ATATTTCACATTCAGCCTCCATGCAGTAGAGATTTG...GAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGGGTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCCAGAAGAGGTTTCCTaGCGCAGTGTCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTPEEVS*RSVQAR
Trigger: CCGAGCCTGGACACTGCGCCAGGAAACCTCTTCTGG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535941.5
CDS-3UTR CCA 90 bp CCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAATTCCCTGATATCCTTTaGGGCCTTGAAGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLRRVNRANCSNAGLELQFPDIL*GLEVLV
Trigger: AACCAGGACTTCAAGGCCCCAAAGGATATCAGGGAA...TTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCTTAGTCAGAAATCGTaGGGACTTGGCAAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCLSQKS*GLGKKV
Trigger: TACCTTTTTGCCAAGTCCTCACGATTTCTGACTAAG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTTTGGGTTTGCCCATTaGTCAAGATCCCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCFGFAH*SRSLKL
Trigger: CAGTTTTAGGGATCTTGATCAATGGGCAAACCCAAA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGATACCTTTTTCACCTTaGTTTCCTTTGTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKIPFSP*FPLSPF
Trigger: AAAGGGGGACAAAGGAAATCAAGGTGAAAAAGGTAT...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCTTTTACCTCCCAGATaGCTCTACTGCCATTTACTA +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCLLPPR*LYCHLL
Trigger: TAGTAAATGGCAGTAGAGTCATCTGGGAGGTAAAAG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535941.5
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGAAGACCACAGTTTGTaGAGAGACATAAAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDEDHSL*RDIKKY
Trigger: GTACTTCTTTATGTCTCTTCACAAACTGTGGTCTTC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACATCCGTAAGTACCACTaGTATCTTAGTCAGAAATCG +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDIRKYH*YLSQKS
Trigger: CGATTTCTGACTAAGATAGCAGTGGTACTTACGGAT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCAAGAGACGAATTTGGTaGCAGCCTTCATCAAACAAC +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCKRRIW*QPSSNN
Trigger: GTTGTTTGATGAAGGCTGGCACCAAATTCGTCTCTT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTTTCCAATTTGGGTTTaGCCATTGATCAAGATCCCT +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDFPIWV*PLIKIP
Trigger: AGGGATCTTGATCAATGGGCAAACCCAAATTGGAAA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTATCCTGGGGAACCCGTTaGTCCTGGTTCTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVSWGTR*SWFSLE
Trigger: CTCAAGGGAGAACCAGGAGCAACGGGTTCCCCAGGA...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR GCA 90 bp CCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAAAACACCTGGTGTCCCTaGAATTCCCTGATATCCTTT +
Preference number: 4 (lower is better)
Translates to: PLRRVNRANCSNAGLELQNTWCP*NSLISF
Trigger: AAAGGATATCAGGGAATTGCAGGGACACCAGGTGTT...TTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CCA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCTATTTCAAAGTTTTCTaGGCCAACACTATAAGAGCC +
Preference number: 4 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGYFKVF*ANTIRA
Trigger: GGCTCTTATAGTGTTGGCCCAGAAAACTTTGAAATA...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCGAAATCGTGAGGACTTaGCAAAAAGGTAATCGAGCG +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGEIVRT*QKGNRA
Trigger: CGCTCGATTACCTTTTTGCCAAGTCCTCACGATTTC...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCACTGGAATTCGTGTTaGACAGACAGATTCTTCACA +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCHWNSC*TDRFFT
Trigger: TGTGAAGAATCTGTCTGTCCAACACGAATTCCAGTG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGGAGGAAGACCTTCTaGGAAAACATTGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGWRKTF*ENIACE
Trigger: CTCACAAGCAATGTTTTCCCAGAAGGTCTTCCTCCA...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp CTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAATTCAGCTCCTTGTATTCCTaGAGATCCTGGAACACCTGG +
Preference number: 4 (lower is better)
Translates to: LRRVNRANCSNAGLELQFSSLYS*RSWNTW
Trigger: CCAGGTGTTCCAGGATCTCCAGGAATACAAGGAGCT...GAATTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGTTTCCAGGAAATCCTaGGATTCCAGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCVSRKS*DSRLSP
Trigger: CGGGGAGAGCCTGGAATCCCAGGATTTCCTGGAAAC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTAGTATCCTGGTTCTCCTaGGGAACCCGTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVVSWFS*GTRCSW
Trigger: CCAGGAGCAACGGGTTCCCCAGGAGAACCAGGATAC...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGGGCCTGGTTGCCCTTaGATTCCAGGTTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCGPGCP*IPGFPW
Trigger: CCATGGAAAACCTGGAATCCAAGGGCAACCAGGCCC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCCTTTTCACCTCAGACACTAATAGTTTaGTCCTTTTCTGAACGGATC +
Preference number: 4 (lower is better)
Translates to: DSPFDPMAPRTPGSPFSPQTLIV*SFSERI
Trigger: GATCCGTTCAGAAAAGGACCAAACTATTAGTGTCTG...AGGTGAAAAGGGAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCTTAGTCAGAAATCGTaGGGACTTGGCAAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGLSQKS*GLGKKV
Trigger: TACCTTTTTGCCAAGTCCTCACGATTTCTGACTAAG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCAAAGGTAACCACTTGTaGGCCATTAATTACGCTGGT +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGKGNHL*AINYAG
Trigger: ACCAGCGTAATTAATGGCTCACAAGTGGTTACCTTT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTTCACCTTTGGGGCCTTaGAGTCCTGGTTTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTSPLGP*SPGFPG
Trigger: TCCGGGAAAACCAGGACTTCAAGGCCCCAAAGGTGA...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACCCAGATTCTCCTTTTaGTCCAATGGCACCTCGGAC +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRPRFSF*SNGTSD
Trigger: GTCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTCGAATAAATTGTTCTaGAAACTCTCTTCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCSNKLF*KLSSGL
Trigger: AAGCCCGGAAGAGAGTTTTCAGAACAATTTATTCGA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTGTTGGGACAGGCAATaGTCACAATTTCTAATTCTT +
Preference number: 4 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDCWDRQ*SQFLIL
Trigger: AAGAATTAGAAATTGTGATCATTGCCTGTCCCAACA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCCCATGCCTAGGCTGCTaGATGAGGCATCAGACACTA +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCPCLGC*MRHQTL
Trigger: TAGTGTCTGATGCCTCATTCAGCAGCCTAGGCATGG...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGTTGGTTATCTTCCTaGGATGCAAAAGACCACAGA +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGCWLSS*DAKDHR
Trigger: TCTGTGGTCTTTTGCATCTCAGGAAGATAACCAACA...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GCCCAATTTCTCCCTTTTGGCCCATTAATCCTCGGTTTCCAGGAAATCCTGGGAAGACACTGTAGTAAATaGGTAGTTCACCAATACTGT +
Preference number: 4 (lower is better)
Translates to: AQFLPFGPLILGFQEILGRHCSK*VVHQYC
Trigger: ACAGTATTGGTGAACTACTCATTTACTACAGTGTCT...TCCCAGGATTTCCTGGAAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR GCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTAACCCGAGCAAGACCTaGGCTGAAACGGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTNPSKT*AETDWL
Trigger: CAGCCAATCCGTTTCAGCGCAGGTCTTGCTCGGGTT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR GCA 90 bp ATTAATCCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACCTTTGATCCTGGCATaGCATGAAGCCCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: INPLRRVNRANCSNAGLEPLILA*HEAQEN
Trigger: GTTTTCCTGGGCTTCATGGCATGCCAGGATCAAAGG...TTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGGATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR GCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAAGCACCAGGGGATCCTaGTTCTCCCTTGAAACCGGG +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLSTRGS*FSLETG
Trigger: CCCGGTTTCAAGGGAGAAGCAGGATCCCCTGGTGCT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGGCCTGGTGAGCCATTaGTTCCCATTAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCGLVSH*FPLNQA
Trigger: TGCCTGGTTTAATGGGAAGCAATGGCTCACCAGGCC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCCTGGAGGACCTTCTTTaGTTATTCCAGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCLEDLL*LFQEGP
Trigger: AGGGCCCTCCTGGAATAAGCAAAGAAGGTCCTCCAG...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCAACTCAAATCTCTACTaGATGGAGGCTGAATGTGAA +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCNSNLY*MEAECE
Trigger: TTCACATTCAGCCTCCATGCAGTAGAGATTTGAGTT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTAGTATGTTCCAGGCAGTaGCAAGCCCAACCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVVCSRQ*QAQPEQ
Trigger: TTGCTCGGGTTGGGCTTGCCACTGCCTGGAACATAC...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACGAGCGCAAACTGGATaGCCTTCCCTGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRRAQTG*PSLSLC
Trigger: ACACAAAGACAGGGAAGGCCATCCAGTTTGCGCTCG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAGATCCTGGAACACCTaGTGTCCCTGCAATTCCCTG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRRSWNT*CPCNSL
Trigger: CAGGGAATTGCAGGGACACCAGGTGTTCCAGGATCT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACTTTCCATGTCTTCCTaGTTCTCCAGCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRLSMSS*FSSRSR
Trigger: CCTGGACCTGCTGGAGAACCAGGAAGACATGGAAAG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTGTTTCCAGGAAATCCTaGGATTCCAGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTVSRKS*DSRLSP
Trigger: CGGGGAGAGCCTGGAATCCCAGGATTTCCTGGAAAC...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTGGGCCTGGTTGCCCTTaGATTCCAGGTTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTGPGCP*IPGFPW
Trigger: CCATGGAAAACCTGGAATCCAAGGGCAACCAGGCCC...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCAAGAGCCATCTAAGATaGAAACTAAATCTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGKSHLR*KLNLSE
Trigger: CTCCGACAGATTTAGTTTTCATCTTAGATGGCTCTT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCCTATCTCTTGCTGCTTaGGCTGCATCCTTGACGTCA +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCLSLAA*AASLTS
Trigger: TGACGTCAAGGATGCAGCTCAAGCAGCAAGAGATAG...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCACAGGGAGCTGGAGTTaGACCTACATCACTGGGACC +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFTGSWS*TYITGT
Trigger: GGTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCACCCATTTCACCCTTTaGTCCTGGCATGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCTHFTL*SWHAMK
Trigger: CTTCATGGCATGCCAGGATCAAAGGGTGAAATGGGT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAGCCCCAGGCATCCCTTaGATTCCAGGTTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLAPGIP*IPGSPL
Trigger: CAAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGC...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAGGCCTTTTAATCCTCTaGCACCTGGACGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLGLLIL*HLDVQG
Trigger: TCCCTGGACGTCCAGGTGTCAGAGGATTAAAAGGCC...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCCATGCCTAGGCTGCTaGATGAGGCATCAGACACTA +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTPCLGC*MRHQTL
Trigger: TAGTGTCTGATGCCTCATTCAGCAGCCTAGGCATGG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCTCCAGGAATCTCACATaGTGTCTCCCGGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCSRNLT*CLPVVL
Trigger: CAGAACAACCGGGAGACAGCATGTGAGATTCCTGGA...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATCCAGGAATCTCACATaGTGTCTCCCGGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRSRNLT*CLPVVL
Trigger: CAGAACAACCGGGAGACAGCATGTGAGATTCCTGGA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTGGCCTGGTGAGCCATTaGTTCCCATTAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTGLVSH*FPLNQA
Trigger: TGCCTGGTTTAATGGGAAGCAATGGCTCACCAGGCC...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCCAACAGGCAATCCACTaGCCCTTATCAAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCQQAIH*PLSRLR
Trigger: TCTCAGCCTTGATAAGGGGCAGTGGATTGCCTGTTG...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAATCACGAGCTGCCACTaGAATTCGTGTTGGACAGAC +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRITSCH*NSCWTD
Trigger: GTCTGTCCAACACGAATTCCAGTGGCAGCTCGTGAT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCATCACGAGCTGCCACTaGAATTCGTGTTGGACAGAC +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCITSCH*NSCWTD
Trigger: GTCTGTCCAACACGAATTCCAGTGGCAGCTCGTGAT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCGTCCAGGGTCACCTTTaGGGCCTTGAAGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFVQGHL*GLEVLV
Trigger: AACCAGGACTTCAAGGCCCCAAAGGTGACCCTGGAC...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCAGCTCCTTGTATTCCTaGAGATCCTGGAACACCTGG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCSSLYS*RSWNTW
Trigger: CCAGGTGTTCCAGGATCTCCAGGAATACAAGGAGCT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAGCTCCTTGTATTCCTaGAGATCCTGGAACACCTGG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRSSLYS*RSWNTW
Trigger: CCAGGTGTTCCAGGATCTCCAGGAATACAAGGAGCT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCCTCCTTTTGATCCAATaGCACCTCGGACACCAGGTT +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCLLLIQ*HLGHQV
Trigger: AACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAG...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACTCCTTTTGATCCAATaGCACCTCGGACACCAGGTT +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRLLLIQ*HLGHQV
Trigger: AACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAGAGACCTGGGTCTCCTaGAGGACCTTCTTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRETWVS*RTFFAY
Trigger: ATAAGCAAAGAAGGTCCTCCAGGAGACCCAGGTCTC...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCGGGCCTGGTTGCCCTTaGATTCCAGGTTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFGPGCP*IPGFPW
Trigger: CCATGGAAAACCTGGAATCCAAGGGCAACCAGGCCC...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACGTCAAATGTTCTCCTaGATCATAGCTTCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRRQMFS*IIASER
Trigger: CCTCTCGGAAGCTATGATTCAGGAGAACATTTGACG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTAACCCATTTCACCCTTTaGTCCTGGCATGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVTHFTL*SWHAMK
Trigger: CTTCATGGCATGCCAGGATCAAAGGGTGAAATGGGT...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR TCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTACCCATTTCACCCTTTaGTCCTGGCATGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTTHFTL*SWHAMK
Trigger: CTTCATGGCATGCCAGGATCAAAGGGTGAAATGGGT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACCATGCCTAGGCTGCTaGATGAGGCATCAGACACTA +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLPCLGC*MRHQTL
Trigger: TAGTGTCTGATGCCTCATTCAGCAGCCTAGGCATGG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAGCCCCTTATCAAGGCTaGGACACTGTAGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRAPYQG*DTVVNE
Trigger: CTCATTTACTACAGTGTCTCAGCCTTGATAAGGGGC...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGCCCCTTATCAAGGCTaGGACACTGTAGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCAPYQG*DTVVNE
Trigger: CTCATTTACTACAGTGTCTCAGCCTTGATAAGGGGC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR GCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAGAGTATGGATTCCACTaGTGCCGTCAAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLREYGFH*CRQMFS
Trigger: GGAGAACATTTGACGGCAGCAGTGGAATCCATACTC...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCTCTTGCTGCTTGAGCTaGATCCTTGACGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCSCCLS*ILDVIL
Trigger: CAAGATGACGTCAAGGATGCAGCTCAAGCAGCAAGA...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATCTTGCTGCTTGAGCTaGATCCTTGACGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRSCCLS*ILDVIL
Trigger: CAAGATGACGTCAAGGATGCAGCTCAAGCAGCAAGA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTCTTCACAAAGTTTCTaGTTCATCACTTCCCTTATT +
Preference number: 4 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCSSQSF*FITSLI
Trigger: AATAAGGGAAGTGATGAAGCAGAAACTTTGTGAAGA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCCTTTCATCACGAGCTaGCACTGGAATTCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTPFITS*HWNSCW
Trigger: CCAACACGAATTCCAGTGGCAGCTCGTGATGAAAGG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTAACACCTGGTGTCCCTaGAATTCCCTGATATCCAGG +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTNTWCP*NSLISR
Trigger: CCTGGATATCAGGGAATTGCAGGGACACCAGGTGTT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTACCTTTGATCCTGGCATaGCATGAAGCCCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVPLILA*HEAQEN
Trigger: GTTTTCCTGGGCTTCATGGCATGCCAGGATCAAAGG...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR GCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACTGGAGGACCTTCTTTaGTTATTCCAGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLLEDLL*LFQEGP
Trigger: AGGGCCCTCCTGGAATAAGCAAAGAAGGTCCTCCAG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACGAGCGCAAACTGGATaGCCTTCCCTGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLRAQTG*PSLSLC
Trigger: ACACAAAGACAGGGAAGGCCATCCAGTTTGCGCTCG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAGGGGCCTTGAAGTCCTaGTTTTCCCGGAGGACAAAT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLGALKS*FSRRTN
Trigger: ATTTGTCCTCCGGGAAAACCAGGACTTCAAGGCCCC...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAAGATCCTGGAACACCTaGTGTCCCTGCAATTCCCTG +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLRSWNT*CPCNSL
Trigger: CAGGGAATTGCAGGGACACCAGGTGTTCCAGGATCT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATTTTCCTTGCTGTCCTaGAGGCCCAATTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRFSLLS*RPNFSL
Trigger: AAGGGAGAAATTGGGCCTCCAGGACAGCAAGGAAAA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAGGATACCCAAACCCTTaGCTCCCTTTTTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRGYPNP*LPFSPF
Trigger: AAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCC...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCAAATCTCTACTGCATaGAGGCTGAATGTGAAATAT +
Preference number: 4 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGQISTA*RLNVKY
Trigger: ATATTTCACATTCAGCCTCCATGCAGTAGAGATTTG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACTTGAGCTGCATCCTTaGCGTCATCTTGGGATTTGC +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLLELHP*RHLGIC
Trigger: GCAAATCCCAAGATGACGTCAAGGATGCAGCTCAAG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTATCTCTTGCTGCTTaGGCTGCATCCTTGACGTCA +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFLSLAA*AASLTS
Trigger: TGACGTCAAGGATGCAGCTCAAGCAGCAAGAGATAG...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTAGCCATAAAATCCAGGTaGTCCTTTGTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVAIKSR*SFVSFG
Trigger: GCCAAAGGAGACAAAGGATCACCTGGATTTTATGGC...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCATCCTGCTTCTCCCTTaGAACCGGGACTACCCATTA +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFILLLP*NRDYPL
Trigger: TAATGGGTAGTCCCGGTTTCAAGGGAGAAGCAGGAT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAATCCTGCTTCTCCCTTaGAACCGGGACTACCCATTA +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLILLLP*NRDYPL
Trigger: TAATGGGTAGTCCCGGTTTCAAGGGAGAAGCAGGAT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCAGTTTGGTCCTTTTCTaGACGGATCTCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCSLVLF*TDLFWQ
Trigger: TTGCCAGAAGAGATCCGTTCAGAAAAGGACCAAACT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CATCAGACACTAATAGTTTGGTCCTTTTCTGAACGGATCTCTTCTGGCAATTACTGTTGGTTATCTTCCTaGGATGCAAAAGACCACAGA +
Preference number: 4 (lower is better)
Translates to: HQTLIVWSFSERISSGNYCWLSS*DAKDHR
Trigger: TCTGTGGTCTTTTGCATCTCAGGAAGATAACCAACA...GTAATTGCCAGAAGAGATCCGTTCAGAAAAGGACCAAACTATTAGTGTCTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCAGGGCTCCAAATGACTaGGGAGCCTTTAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCRAPND*GAFKIS
Trigger: ACTGATTTTAAAGGCTCCTCAGTCATTTGGAGCCCT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTAGCCCCTTATCAAGGCTaGGACACTGTAGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVAPYQG*DTVVNE
Trigger: CTCATTTACTACAGTGTCTCAGCCTTGATAAGGGGC...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR GCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACTTACTATCTCTTGCTaGTTGAGCTGCATCCTTGAC +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRLTISC*LSCILD
Trigger: GTCAAGGATGCAGCTCAAGCAGCAAGAGATAGTAAG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCCTTTCATCACGAGCTaGCACTGGAATTCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFPFITS*HWNSCW
Trigger: CCAACACGAATTCCAGTGGCAGCTCGTGATGAAAGG...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCCTTTGATCCTGGCATaGCATGAAGCCCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFPLILA*HEAQEN
Trigger: GTTTTCCTGGGCTTCATGGCATGCCAGGATCAAAGG...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCACCTCTCTCTCCTTTTaGACCATGATGGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCTSLSF*TMMALN
Trigger: ATTCAAGGCCATCATGGTGCAAAAGGAGAGAGAGGT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCTCCTTGACGTCATCTTaGGATTTGCCATCCGTAAGT +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCSLTSS*DLPSVS
Trigger: ACTTACGGATGGCAAATCCCAAGATGACGTCAAGGA...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGGAGGAAGACCTTCTaGGAAAACATTGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRWRKTF*ENIACE
Trigger: CTCACAAGCAATGTTTTCCCAGAAGGTCTTCCTCCA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCCGGTTGTTCTGTTCTaGGTCACAGTAGATTCGCAA +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTPVVLF*VTVDSQ
Trigger: TTGCGAATCTACTGTGACCCAGAACAGAACAACCGG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTCCTTTTGATCCAATaGCACCTCGGACACCAGGTT +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFLLLIQ*HLGHQV
Trigger: AACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAG...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACTCCTTTTGATCCAATaGCACCTCGGACACCAGGTT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLLLLIQ*HLGHQV
Trigger: AACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACGTCAAATGTTCTCCTaGATCATAGCTTCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLRQMFS*IIASER
Trigger: CCTCTCGGAAGCTATGATTCAGGAGAACATTTGACG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGGCATCTTCTGTTTCTaGACCAACACCAATAGCAAA +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCGIFCF*TNTNSK
Trigger: TTTGCTATTGGTGTTGGTTCAGAAACAGAAGATGCC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAAAGGTAACCACTTGTaGGCCATTAATTACGCTGGT +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRKGNHL*AINYAG
Trigger: ACCAGCGTAATTAATGGCTCACAAGTGGTTACCTTT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCAACAACGTCTTAACTTaGGGGTTAGCAAAGGTAACC +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCNNVLT*GLAKVT
Trigger: GGTTACCTTTGCTAACCCTCAAGTTAAGACGTTGTT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAGCCATAAAATCCAGGTaGTCCTTTGTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLAIKSR*SFVSFG
Trigger: GCCAAAGGAGACAAAGGATCACCTGGATTTTATGGC...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp CATCAGACACTAATAGTTTGGTCCTTTTCTGAACGGATCTCTTCTGGCAATTACATACCTTTTTCACCTTaGTTTCCTTTGTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: HQTLIVWSFSERISSGNYIPFSP*FPLSPF
Trigger: AAAGGGGGACAAAGGAAATCAAGGTGAAAAAGGTAT...GTAATTGCCAGAAGAGATCCGTTCAGAAAAGGACCAAACTATTAGTGTCTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR TCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTAGTTTGGTCCTTTTCTaGACGGATCTCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTSLVLF*TDLFWQ
Trigger: TTGCCAGAAGAGATCCGTTCAGAAAAGGACCAAACT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCTCTTGCTGCTTGAGCTaGATCCTTGACGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFSCCLS*ILDVIL
Trigger: CAAGATGACGTCAAGGATGCAGCTCAAGCAGCAAGA...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAAGAGACGAATTTGGTaGCAGCCTTCATCAAACAAC +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRKRRIW*QPSSNN
Trigger: GTTGTTTGATGAAGGCTGGCACCAAATTCGTCTCTT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp CTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAATTCCTATACTTCCCTTTTTaGCATAAAATCCAGGTGATC +
Preference number: 4 (lower is better)
Translates to: LRRVNRANCSNAGLELQFLYFPF*HKIQVI
Trigger: GATCACCTGGATTTTATGGCAAAAAGGGAAGTATAG...GAATTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTTCCTTGACGTCATCTTaGGATTTGCCATCCGTAAGT +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTSLTSS*DLPSVS
Trigger: ACTTACGGATGGCAAATCCCAAGATGACGTCAAGGA...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACACTGGAATTCGTGTTaGACAGACAGATTCTTCACA +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRHWNSC*TDRFFT
Trigger: TGTGAAGAATCTGTCTGTCCAACACGAATTCCAGTG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCCGGTTGTTCTGTTCTaGGTCACAGTAGATTCGCAA +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFPVVLF*VTVDSQ
Trigger: TTGCGAATCTACTGTGACCCAGAACAGAACAACCGG...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCCCAATTTCTCCCTTTTaGCCCATTAATCCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCPISPF*PINPRF
Trigger: AAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGG...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCGGATACCCAAACCCTTaGCTCCCTTTTTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFGYPNP*LPFSPF
Trigger: AAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCC...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTGTGACTAAAACTGACTaGCTAACAGGCAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTVTKTD*LTGNGG
Trigger: TCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCAC...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTAAACAACGTCTTAACTTaGGGGTTAGCAAAGGTAACC +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVNNVLT*GLAKVT
Trigger: GGTTACCTTTGCTAACCCTCAAGTTAAGACGTTGTT...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAAGTTTGGTCCTTTTCTaGACGGATCTCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLSLVLF*TDLFWQ
Trigger: TTGCCAGAAGAGATCCGTTCAGAAAAGGACCAAACT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCAGGGCTCCAAATGACTaGGGAGCCTTTAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFRAPND*GAFKIS
Trigger: ACTGATTTTAAAGGCTCCTCAGTCATTTGGAGCCCT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAACTGTCTATCCCAGGTaGATATCAGCCCTGATCTTA +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLTVYPR*ISALIL
Trigger: TAAGATCAGGGCTGATATTCACCTGGGATAGACAGT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR GCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCATCCGTAAGTACCACTaGTATCTTAGTCAGAAATCG +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCIRKYH*YLSQKS
Trigger: CGATTTCTGACTAAGATAGCAGTGGTACTTACGGAT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTTACTATCTCTTGCTaGTTGAGCTGCATCCTTGAC +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFLTISC*LSCILD
Trigger: GTCAAGGATGCAGCTCAAGCAGCAAGAGATAGTAAG...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATGGAGGAAGACCTTCTaGGAAAACATTGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLWRKTF*ENIACE
Trigger: CTCACAAGCAATGTTTTCCCAGAAGGTCTTCCTCCA...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCCAATTTCTCCCTTTTaGCCCATTAATCCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTPISPF*PINPRF
Trigger: AAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCCAGACACTAATAGTTTaGTCCTTTTCTGAACGGATC +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCQTLIV*SFSERI
Trigger: GATCCGTTCAGAAAAGGACCAAACTATTAGTGTCTG...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACAGACACTAATAGTTTaGTCCTTTTCTGAACGGATC +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRQTLIV*SFSERI
Trigger: GATCCGTTCAGAAAAGGACCAAACTATTAGTGTCTG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCGTGACTAAAACTGACTaGCTAACAGGCAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFVTKTD*LTGNGG
Trigger: TCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCAC...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCAACAACGTCTTAACTTaGGGGTTAGCAAAGGTAACC +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFNNVLT*GLAKVT
Trigger: GGTTACCTTTGCTAACCCTCAAGTTAAGACGTTGTT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTATACCTTTTTCACCTTaGTTTCCTTTGTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTIPFSP*FPLSPF
Trigger: AAAGGGGGACAAAGGAAATCAAGGTGAAAAAGGTAT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTTCGAATAAATTGTTCTaGAAACTCTCTTCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTSNKLF*KLSSGL
Trigger: AAGCCCGGAAGAGAGTTTTCAGAACAATTTATTCGA...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCTGTTGGGACAGGCAATaGTCACAATTTCTAATTCTT +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCCWDRQ*SQFLIL
Trigger: AAGAATTAGAAATTGTGATCATTGCCTGTCCCAACA...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATGTTGGTTATCTTCCTaGGATGCAAAAGACCACAGA +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLCWLSS*DAKDHR
Trigger: TCTGTGGTCTTTTGCATCTCAGGAAGATAACCAACA...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAGACACTGTAGTAAATaGGTAGTTCACCAATACTGT +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRRHCSK*VVHQYC
Trigger: ACAGTATTGGTGAACTACTCATTTACTACAGTGTCT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR TCA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCAGACACTGTAGTAAATaGGTAGTTCACCAATACTGT +
Preference number: 4 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCRHCSK*VVHQYC
Trigger: ACAGTATTGGTGAACTACTCATTTACTACAGTGTCT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATATTTCAAAGTTTTCTaGGCCAACACTATAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRYFKVF*ANTIRA
Trigger: GGCTCTTATAGTGTTGGCCCAGAAAACTTTGAAATA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAACTAAGAGACGAATTTaGTGCCAGCCTTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLTKRRI*CQPSSN
Trigger: GTTTGATGAAGGCTGGCACCAAATTCGTCTCTTAGT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACCAATTTCTCCCTTTTaGCCCATTAATCCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLPISPF*PINPRF
Trigger: AAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCATACCTTTTTCACCTTaGTTTCCTTTGTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFIPFSP*FPLSPF
Trigger: AAAGGGGGACAAAGGAAATCAAGGTGAAAAAGGTAT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCTCGAATAAATTGTTCTaGAAACTCTCTTCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFSNKLF*KLSSGL
Trigger: AAGCCCGGAAGAGAGTTTTCAGAACAATTTATTCGA...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAATCCGTAAGTACCACTaGTATCTTAGTCAGAAATCG +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLIRKYH*YLSQKS
Trigger: CGATTTCTGACTAAGATAGCAGTGGTACTTACGGAT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCTTTCCAATTTGGGTTTaGCCATTGATCAAGATCCCT +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFFPIWV*PLIKIP
Trigger: AGGGATCTTGATCAATGGGCAAACCCAAATTGGAAA...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCAACTCAAATCTCTACTaGATGGAGGCTGAATGTGAA +
Preference number: 4 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFNSNLY*MEAECE
Trigger: TTCACATTCAGCCTCCATGCAGTAGAGATTTGAGTT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTTATTTCAAAGTTTTCTaGGCCAACACTATAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTYFKVF*ANTIRA
Trigger: GGCTCTTATAGTGTTGGCCCAGAAAACTTTGAAATA...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAGAATATTTTCCAATTTaGGTTTGCCCATTGATCAAG +
Preference number: 4 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLREYFPI*VCPLIK
Trigger: CTTGATCAATGGGCAAACCCAAATTGGAAAATATTC...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR TCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATGTTGGGACAGGCAATaGTCACAATTTCTAATTCTT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLCWDRQ*SQFLIL
Trigger: AAGAATTAGAAATTGTGATCATTGCCTGTCCCAACA...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTATCTTCACAAAGTTTCTaGTTCATCACTTCCCTTATT +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVSSQSF*FITSLI
Trigger: AATAAGGGAAGTGATGAAGCAGAAACTTTGTGAAGA...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR GCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTTCTTCACAAAGTTTCTaGTTCATCACTTCCCTTATT +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTSSQSF*FITSLI
Trigger: AATAAGGGAAGTGATGAAGCAGAAACTTTGTGAAGA...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR GCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAAATCTTATTCAGAGGTaGTATTCACAACACCGAACA +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLNLIQR*YSQHRT
Trigger: TGTTCGGTGTTGTGAATAGCACCTCTGAATAAGATT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CCA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTAGAATATTTTCCAATTTaGGTTTGCCCATTGATCAAG +
Preference number: 4 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVEYFPI*VCPLIK
Trigger: CTTGATCAATGGGCAAACCCAAATTGGAAAATATTC...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CCA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTGAATATTTTCCAATTTaGGTTTGCCCATTGATCAAG +
Preference number: 4 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTEYFPI*VCPLIK
Trigger: CTTGATCAATGGGCAAACCCAAATTGGAAAATATTC...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CCA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACAAATCTCTACTGCATaGAGGCTGAATGTGAAATAT +
Preference number: 4 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLQISTA*RLNVKY
Trigger: ATATTTCACATTCAGCCTCCATGCAGTAGAGATTTG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS CCA 90 bp GGCAGTGGCAAGCCCAACCCGAGCAAGACCTGCGCTGAAACGGATTaGCTGCCCTCCGCCCGGAGTCCGTTCTCCCTGCAGCGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GSGKPNPSKTCAETD*LPSARSPFSLQRPV
Trigger: CACTGGCCGCTGCAGGGAGAACGGACTCCGGGCGGAGGGCAGCCAATCCGTTTCAGCGCAGGTCTTGCTCGGGTTGGGCTTGCCACTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS GCA 90 bp GTGGCAAGCCCAACCCGAGCAAGACCTGCGCTGAAACGGATTGGCTaGCCTCCGCCCGGAGTCCGTTCTCCCTGCAGCGGCCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: VASPTRARPALKRIG*PPPGVRSPCSGQCR
Trigger: TCTGCACTGGCCGCTGCAGGGAGAACGGACTCCGGGCGGAGGGCAGCCAATCCGTTTCAGCGCAGGTCTTGCTCGGGTTGGGCTTGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS GCA 90 bp GCGCAGTGTCCAGGCTCGGGGTTGCCGTCGCAGCCAGCTGAGTGTTaGGCCAGGGGGACAGGTATGTTCCAGGCAGTGGCAAGCCCAACC +
Preference number: 5 (lower is better)
Translates to: AQCPGSGLPSQPAEC*ARGTGMFQAVASPT
Trigger: GGTTGGGCTTGCCACTGCCTGGAACATACCTGTCCCCCTGGCGCAACACTCAGCTGGCTGCGACGGCAACCCCGAGCCTGGACACTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS TCA 90 bp ATTCCTGGCGCAGTGTCCAGGCTCGGGGTTGCCGTCGCAGCCAGCTaGGTGTTGCGCCAGGGGGACAGGTATGTTCCAGGCAGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: IPGAVSRLGVAVAAS*VLRQGDRYVPGSGK
Trigger: CTTGCCACTGCCTGGAACATACCTGTCCCCCTGGCGCAACACTCAGCTGGCTGCGACGGCAACCCCGAGCCTGGACACTGCGCCAGGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS TCA 90 bp GTATGTTCCAGGCAGTGGCAAGCCCAACCCGAGCAAGACCTGCGCTaGAACGGATTGGCTGCCCTCCGCCCGGAGTCCGTTCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: VCSRQWQAQPEQDLR*NGLAALRPESVLPA
Trigger: TGCAGGGAGAACGGACTCCGGGCGGAGGGCAGCCAATCCGTTTCAGCGCAGGTCTTGCTCGGGTTGGGCTTGCCACTGCCTGGAACATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS GCA 90 bp GACAGGTATGTTCCAGGCAGTGGCAAGCCCAACCCGAGCAAGACCTaGGCTGAAACGGATTGGCTGCCCTCCGCCCGGAGTCCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: DRYVPGSGKPNPSKT*AETDWLPSARSPFS
Trigger: GGAGAACGGACTCCGGGCGGAGGGCAGCCAATCCGTTTCAGCGCAGGTCTTGCTCGGGTTGGGCTTGCCACTGCCTGGAACATACCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGTCCAGGCTCGGGGTaGCCGTCGCAGCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCCPGSG*PSQPAE
Trigger: CTCAGCTGGCTGCGACGGCAACCCCGAGCCTGGACA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000535941.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGCTCCTGGTTCTCCCTaGAGCCCAGAAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDAPGSP*SPEAPG
Trigger: GCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAGC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GGGGACCAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTTGCACCATGATGGCCTaGAATTCCCTGTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GDQEDLVLQDTQTLGSLFCTMMA*NSLLPW
Trigger: CCAGGGCAACAGGGAATTCAAGGCCATCATGGTGCA...AAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTGGTCCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCACCTGGATCCCCAGGTaGCCCCTTAGGACCTGCGGG +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCTWIPR*PLRTCG
Trigger: CCCGCAGGTCCTAAGGGGCAACCTGGGGATCCAGGT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp CAGGAGGACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATGGGGCCTGGTTGCCCTaGGATTCCAGGTTTTCCATG +
Preference number: 5 (lower is better)
Translates to: QEDLVLQDTQTLGSLFPHGAWLP*DSRFSM
Trigger: CATGGAAAACCTGGAATCCAAGGGCAACCAGGCCCC...ATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTCCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CAA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCGTCACCTTTGGGGCCTaGAAGTCCTGGTTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGVTFGA*KSWFSR
Trigger: CCGGGAAAACCAGGACTTCAAGGCCCCAAAGGTGAC...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp CCCTTAGATCCCGGTGTTCCAGGCTGGCCTGGTGAGCCATTGCTTCCCATTAAAGATCCTGCTTCTCCCTaGAAACCGGGACTACCCATT +
Preference number: 5 (lower is better)
Translates to: PLDPGVPGWPGEPLLPIKDPASP*KPGLPI
Trigger: AATGGGTAGTCCCGGTTTCAAGGGAGAAGCAGGATC...TTTAATGGGAAGCAATGGCTCACCAGGCCAGCCTGGAACACCGGGATCTAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CAA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCCCTGGAGGACCTTCTTaGCTTATTCCAGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGPGGPS*LIPGGP
Trigger: GGGCCCTCCTGGAATAAGCAAAGAAGGTCCTCCAGG...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CAA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGTCACCTTTGGGGCCTaGAAGTCCTGGTTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKVTFGA*KSWFSR
Trigger: CCGGGAAAACCAGGACTTCAAGGCCCCAAAGGTGAC...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACACCCGGGGAGCCATGTaGGGACAGGCAATGATCACA +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDTRGAM*GQAMIT
Trigger: TGTGATCATTGCCTGTCCCAACATGGCTCCCCGGGT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GCCCAATTTCTCCCTTTTGGCCCATTAATCCTCGGTTTCCAGGAAATCCTGGGACCTGGAGGACCTTCTTaGCTTATTCCAGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: AQFLPFGPLILGFQEILGPGGPS*LIPGGP
Trigger: GGGCCCTCCTGGAATAAGCAAAGAAGGTCCTCCAGG...TCCCAGGATTTCCTGGAAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACCCTGGAGGACCTTCTTaGCTTATTCCAGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDPGGPS*LIPGGP
Trigger: GGGCCCTCCTGGAATAAGCAAAGAAGGTCCTCCAGG...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCCTTTTCACCTCCATGGTCTCCATCTTaGCCAGGGAGACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: DSPFDPMAPRTPGSPFSPPWSPS*PGRPGS
Trigger: AGACCCAGGTCTCCCTGGCAAAGATGGAGACCATGG...AGGTGAAAAGGGAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CAA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGGGGCCTGGTTGCCCTaGGATTCCAGGTTTTCCATG +
Preference number: 5 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKGAWLP*DSRFSM
Trigger: CATGGAAAACCTGGAATCCAAGGGCAACCAGGCCCC...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CAA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCTACAGGGAGCTGGAGTaGAACCTACATCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGYRELE*NLHHWD
Trigger: GTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGTA...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTGCACCATGATGGCCTaGAATTCCCTGTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDCTMMA*NSLLPW
Trigger: CCAGGGCAACAGGGAATTCAAGGCCATCATGGTGCA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGTGCACCATGATGGCCTaGAATTCCCTGTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKCTMMA*NSLLPW
Trigger: CCAGGGCAACAGGGAATTCAAGGCCATCATGGTGCA...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CAA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGTCCAGGCTTACCATCTaGACCAGGTTGTCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKSRLTI*TRLSRV
Trigger: TACCCTGGACAACCTGGTCAAGATGGTAAGCCTGGA...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGATCCTGCTTCTCCCTaGAAACCGGGACTACCCATT +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDDPASP*KPGLPI
Trigger: AATGGGTAGTCCCGGTTTCAAGGGAGAAGCAGGATC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGGCCTGGTGAGCCATaGCTTCCCATTAAACCAGGC +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCWPGEP*LPIKPG
Trigger: GCCTGGTTTAATGGGAAGCAATGGCTCACCAGGCCA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCATTCCAGGTTCACCTTaGCTTCCCTTAGATCCCGGT +
Preference number: 5 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGIPGSP*LPLDPG
Trigger: ACCGGGATCTAAGGGAAGCAAAGGTGAACCTGGAAT...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGCCTTGAATTCCCTGTaGCCCTGGAATTCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDALNSL*PWNSLS
Trigger: AGACAGGGAATTCCAGGGCAACAGGGAATTCAAGGC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GATTCTCCTTTTGATCCAATGGCACCTCGGACACCAGGTTCTCCCTTTTCACCTGCCTTGAATTCCCTGTaGCCCTGGAATTCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: DSPFDPMAPRTPGSPFSPALNSL*PWNSLS
Trigger: AGACAGGGAATTCCAGGGCAACAGGGAATTCAAGGC...AGGTGAAAAGGGAGAACCTGGTGTCCGAGGTGCCATTGGATCAAAAGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CAA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGCCCCAGATTCTCCTTTaGATCCAATGGCACCTCGGA +
Preference number: 5 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKPQILL*IQWHLG
Trigger: TCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGGG...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCACCCGGGGAGCCATGTaGGGACAGGCAATGATCACA +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGTRGAM*GQAMIT
Trigger: TGTGATCATTGCCTGTCCCAACATGGCTCCCCGGGT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS GCA 90 bp TTCATGGAGCTCCAGGGATCTCAGCTCACAGTAGAACCCAGTCCCTaGCTACAAATTTTCACTGTGAGCCATAAGGCTCCCTGTACACAA +
Preference number: 5 (lower is better)
Translates to: FMELQGSQLTVEPSP*LQIFTVSHKAPCTQ
Trigger: TTGTGTACAGGGAGCCTTATGGCTCACAGTGAAAATTTGTAGGCAGGGACTGGGTTCTACTGTGAGCTGAGATCCCTGGAGCTCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467045.5
CDS-3UTR CAA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCATCCTTGACGTCATCTaGGGATTTGCCATCCGTAAG +
Preference number: 5 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGILDVI*GFAIRK
Trigger: CTTACGGATGGCAAATCCCAAGATGACGTCAAGGAT...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACACTATCTCTTGCTGCTaGAGCTGCATCCTTGACGTC +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDTISCC*SCILDV
Trigger: GACGTCAAGGATGCAGCTCAAGCAGCAAGAGATAGT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGGCGTAGACGAAGGCTTGTaGGCAATAGCTCTAAGTTCG +
Preference number: 5 (lower is better)
Translates to: EVLFTTPNNRQSTAPYQGVDEGL*AIALSS
Trigger: CGAACTTAGAGCTATTGCCAACAAGCCTTCGTCTAC...GCCTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCATGCTGTCTCCCGGTaGTTCTGTTCTGGGTCACAG +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGHAVSR*FCSGSQ
Trigger: CTGTGACCCAGAACAGAACAACCGGGAGACAGCATG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AATCCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGAGTCCACGATCACCCTaGTCACCATCTCGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: NPLRRVNRANCSNAGLELSPRSP*SPSRPG
Trigger: ACCAGGGCGAGATGGTGACAAGGGTGATCGTGGACT...CAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACCACCCATTTCACCCTTaGATCCTGGCATGCCATGAA +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDHPFHP*ILACHE
Trigger: TTCATGGCATGCCAGGATCAAAGGGTGAAATGGGTG...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGGCCTGGTGAGCCATaGCTTCCCATTAAACCAGGC +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGWPGEP*LPIKPG
Trigger: GCCTGGTTTAATGGGAAGCAATGGCTCACCAGGCCA...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCGCCTTGAATTCCCTGTaGCCCTGGAATTCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCALNSL*PWNSLS
Trigger: AGACAGGGAATTCCAGGGCAACAGGGAATTCAAGGC...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCACCTGGATCCCCAGGTaGCCCCTTAGGACCTGCGGG +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCTWIPR*PLRTCG
Trigger: CCCGCAGGTCCTAAGGGGCAACCTGGGGATCCAGGT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGAGGATACCCAAACCCTaGGCTCCCTTTTTCCCCATT +
Preference number: 5 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKRIPKP*APFFPI
Trigger: AATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCT...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CAA 90 bp GACCTTGTTCTCCAGGATACCCAAACCCTTGGCTCCCTTTTTCCCCATTTCTTCAGGATACCCAAACCCTaGGCTCCCTTTTTCCCCATT +
Preference number: 5 (lower is better)
Translates to: DLVLQDTQTLGSLFPHFFRIPKP*APFFPI
Trigger: AATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCT...GAAGAAATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCTGGAGAACAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATGTCCAGGCTCGGGGTaGCCGTCGCAGCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLCPGSG*PSQPAE
Trigger: CTCAGCTGGCTGCGACGGCAACCCCGAGCCTGGACA...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000535941.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTGGCCTTCCCTGTCTTaGTGTTTCCTCCTAAGTAGA +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDWPSLS*CFLLSR
Trigger: TCTACTTAGGAGGAAACACAAAGACAGGGAAGGCCA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCACTATCTCTTGCTGCTaGAGCTGCATCCTTGACGTC +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCTISCC*SCILDV
Trigger: GACGTCAAGGATGCAGCTCAAGCAGCAAGAGATAGT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGTAGACGAAGGCTTGTaGGCAATAGCTCTAAGTTCG +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDVDEGL*AIALSS
Trigger: CGAACTTAGAGCTATTGCCAACAAGCCTTCGTCTAC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTCCAGGCTTACCATCTaGACCAGGTTGTCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGSRLTI*TRLSRV
Trigger: TACCCTGGACAACCTGGTCAAGATGGTAAGCCTGGA...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCACCCATTTCACCCTTaGATCCTGGCATGCCATGAA +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCHPFHP*ILACHE
Trigger: TTCATGGCATGCCAGGATCAAAGGGTGAAATGGGTG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGAATCCAGGTGATCCTTaGTCTCCTTTGGCACCCATT +
Preference number: 5 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKNPGDP*SPLAPI
Trigger: AATGGGTGCCAAAGGAGACAAAGGATCACCTGGATT...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCGATCCTGCTTCTCCCTaGAAACCGGGACTACCCATT +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGDPASP*KPGLPI
Trigger: AATGGGTAGTCCCGGTTTCAAGGGAGAAGCAGGATC...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTGCTCCTGGTTCTCCCTaGAGCCCAGAAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTAPGSP*SPEAPG
Trigger: GCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAGC...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS TCA 90 bp TTGAAGTCCTGGTTTTCCCGGAGGACAAATACAGGGAGCTGGAGTTaGACCTACATCACTGGGACCATTAAGGCACTCTCCATTAAATCC +
Preference number: 5 (lower is better)
Translates to: LKSWFSRRTNTGSWS*TYITGTIKALSIKS
Trigger: GGATTTAATGGAGAGTGCCTTAATGGTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGTATTTGTCCTCCGGGAAAACCAGGACTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000456983.1
CDS TCA 90 bp TTGAAGTCCTGGTTTTCCCGGAGGACAAATACAGGGAGCTGGAGTTaGACCTACATCACTGGGACCATTAAGGCAAAATCCAGGAATCTC +
Preference number: 5 (lower is better)
Translates to: LKSWFSRRTNTGSWS*TYITGTIKAKSRNL
Trigger: GAGATTCCTGGATTTTGCCTTAATGGTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGTATTTGTCCTCCGGGAAAACCAGGACTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370819.5
CDS TCA 90 bp TTGAAGTCCTGGTTTTCCCGGAGGACAAATACAGGGAGCTGGAGTTaGACCTACATCACTGGGACCATTAAGGCACTTTACAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: LKSWFSRRTNTGSWS*TYITGTIKALYKSR
Trigger: CCTGGATTTGTAAAGTGCCTTAATGGTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGTATTTGTCCTCCGGGAAAACCAGGACTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535941.5
CDS GCA 90 bp ACTGGGACCATTAAGGCACTCTCCATTAAATCCAGGAATCTCACATaGTGTCTCCCGGTTGTTCTGTTCTGGGTCACAGTAGATTCGCAA +
Preference number: 5 (lower is better)
Translates to: TGTIKALSIKSRNLT*CLPVVLFWVTVDSQ
Trigger: TTGCGAATCTACTGTGACCCAGAACAGAACAACCGGGAGACAGCATGTGAGATTCCTGGATTTAATGGAGAGTGCCTTAATGGTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCACGTCATCTTGGGATTaGCCATCCGTAAGTACCACT +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCTSSWD*PSVSTT
Trigger: AGTGGTACTTACGGATGGCAAATCCCAAGATGACGT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCCCACTGGAATTCGTGTaGGACAGACAGATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCPLEFV*DRQILH
Trigger: GTGAAGAATCTGTCTGTCCAACACGAATTCCAGTGG...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCAATCCAGGTGATCCTTaGTCTCCTTTGGCACCCATT +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCNPGDP*SPLAPI
Trigger: AATGGGTGCCAAAGGAGACAAAGGATCACCTGGATT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAGCTCCTGGTTCTCCCTaGAGCCCAGAAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLAPGSP*SPEAPG
Trigger: GCCTGGGGCTTCTGGGCTCAAGGGAGAACCAGGAGC...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCAGGATACCCAAACCCTaGGCTCCCTTTTTCCCCATT +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGRIPKP*APFFPI
Trigger: AATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS TCA 90 bp GGATTTGCCATCCGTAAGTACCACTGCTATCTTAGTCAGAAATCGTaGGGACTTGGCAAAAAGGTAATCGAGCGCAAACTGGATGGCCTT +
Preference number: 5 (lower is better)
Translates to: GFAIRKYHCYLSQKS*GLGKKVIERKLDGL
Trigger: AAGGCCATCCAGTTTGCGCTCGATTACCTTTTTGCCAAGTCCTCACGATTTCTGACTAAGATAGCAGTGGTACTTACGGATGGCAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS TCA 90 bp AACCTCACAGAAGTCGGCCAGCTAACTCATGTGGTGGCTGCAGGTTaGGAGAAGCTCCCATCTGAAATTCGTAATATAATCTTTGAGTGG +
Preference number: 5 (lower is better)
Translates to: NLTEVGQLTHVVAAG*EKLPSEIRNIIFEW
Trigger: CCACTCAAAGATTATATTACGAATTTCAGATGGGAGCTTCTCTCAACCTGCAGCCACCACATGAGTTAGCTGGCCGACTTCTGTGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370819.5
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCACGTCATCTTGGGATTaGCCATCCGTAAGTACCACT +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGTSSWD*PSVSTT
Trigger: AGTGGTACTTACGGATGGCAAATCCCAAGATGACGT...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCCCACTGGAATTCGTGTaGGACAGACAGATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGPLEFV*DRQILH
Trigger: GTGAAGAATCTGTCTGTCCAACACGAATTCCAGTGG...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTTTTCCAATTTGGGTTaGCCCATTGATCAAGATCCC +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDFSNLG*PIDQDP
Trigger: GGGATCTTGATCAATGGGCAAACCCAAATTGGAAAA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp CTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAATTCTACAGGGAGCTGGAGTaGAACCTACATCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: LRRVNRANCSNAGLELQFYRELE*NLHHWD
Trigger: GTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGTA...GAATTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGTCACCTTTGGGGCCTaGAAGTCCTGGTTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCVTFGA*KSWFSR
Trigger: CCGGGAAAACCAGGACTTCAAGGCCCCAAAGGTGAC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAGTCCACGATCACCCTaGTCACCATCTCGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRSPRSP*SPSRPG
Trigger: ACCAGGGCGAGATGGTGACAAGGGTGATCGTGGACT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp CCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAAAATCCAGGTGATCCTTaGTCTCCTTTGGCACCCATT +
Preference number: 5 (lower is better)
Translates to: PLRRVNRANCSNAGLELQNPGDP*SPLAPI
Trigger: AATGGGTGCCAAAGGAGACAAAGGATCACCTGGATT...TTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCCCATGGTCTCCATCTTaGCCAGGGAGACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCPWSPS*PGRPGS
Trigger: AGACCCAGGTCTCCCTGGCAAAGATGGAGACCATGG...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTTCAAGGGATTACTGTaGGTTATCTTCCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDFKGLL*VIFLRC
Trigger: GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGTTCAAGGGATTACTGTaGGTTATCTTCCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKFKGLL*VIFLRC
Trigger: GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAA...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS-3UTR CAA 90 bp GCCCAATTTCTCCCTTTTGGCCCATTAATCCTCGGTTTCCAGGAAATCCTGGGATTCAAGGGATTACTGTaGGTTATCTTCCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: AQFLPFGPLILGFQEILGFKGLL*VIFLRC
Trigger: GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAA...TCCCAGGATTTCCTGGAAACCGAGGATTAATGGGCCAAAAGGGAGAAATTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488912.5
CDS CCA 90 bp GCAAAATCCAGGAATCTCACATGCTGTCTCCCGGTTGTTCTGTTCTaGGTCACAGTAGATTCGCAACTTTTGGACATCAAACTGAACAGT +
Preference number: 5 (lower is better)
Translates to: AKSRNLTCCLPVVLF*VTVDSQLLDIKLNS
Trigger: ACTGTTCAGTTTGATGTCCAAAAGTTGCGAATCTACTGTGACCCAGAACAGAACAACCGGGAGACAGCATGTGAGATTCCTGGATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370819.5
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCGAGCAGTACGACAACTaGATCTTACTTCCCCATCTT +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGEQYDN*ILLPHL
Trigger: AAGATGGGGAAGTAAGATCAAGTTGTCGTACTGCTC...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTTGAACCACTCCAACTaGAATAAACTTCGGCCCTAT +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCLNHSN*NKLRPY
Trigger: ATAGGGCCGAAGTTTATTCAAGTTGGAGTGGTTCAA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACAGGGTAGTCACTATATaGAACCACTCCAACTTGAAT +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDRVVTI*NHSNLN
Trigger: ATTCAAGTTGGAGTGGTTCAATATAGTGACTACCCT...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp CAGAGGTGCTATTCACAACACCGAACAACAGGCAATCCACTGCCCCTTATCAAGAGGGTAGTCACTATATaGAACCACTCCAACTTGAAT +
Preference number: 5 (lower is better)
Translates to: QRCYSQHRTTGNPLPLIKRVVTI*NHSNLN
Trigger: ATTCAAGTTGGAGTGGTTCAATATAGTGACTACCCT...CTTGATAAGGGGCAGTGGATTGCCTGTTGTTCGGTGTTGTGAATAGCACCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTTATCTTACTATCTCTaGCTGCTTGAGCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCLSYYL*LLELHP
Trigger: AGGATGCAGCTCAAGCAGCAAGAGATAGTAAGATAA...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACGTAGATTCGCAACTTTaGGACATCAAACTGAACAGT +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDVDSQL*DIKLNS
Trigger: ACTGTTCAGTTTGATGTCCAAAAGTTGCGAATCTAC...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTAGTCCACGATCACCCTaGTCACCATCTCGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTSPRSP*SPSRPG
Trigger: ACCAGGGCGAGATGGTGACAAGGGTGATCGTGGACT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp CTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGCAATTCCACCCATTTCACCCTTaGATCCTGGCATGCCATGAA +
Preference number: 5 (lower is better)
Translates to: LRRVNRANCSNAGLELQFHPFHP*ILACHE
Trigger: TTCATGGCATGCCAGGATCAAAGGGTGAAATGGGTG...GAATTGCAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CAA 90 bp AATCCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAACTGGATCCTTTGTCTCCTTaGGCACCCATTTCACCCTTT +
Preference number: 5 (lower is better)
Translates to: NPLRRVNRANCSNAGLELDPLSP*APISPF
Trigger: AAAGGGTGAAATGGGTGCCAAAGGAGACAAAGGATC...CAGTTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGGCCTGGTGAGCCATaGCTTCCCATTAAACCAGGC +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRWPGEP*LPIKPG
Trigger: GCCTGGTTTAATGGGAAGCAATGGCTCACCAGGCCA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCACCATGATGGCCTaGAATTCCCTGTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRCTMMA*NSLLPW
Trigger: CCAGGGCAACAGGGAATTCAAGGCCATCATGGTGCA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCCTGGAGGACCTTCTTaGCTTATTCCAGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTPGGPS*LIPGGP
Trigger: GGGCCCTCCTGGAATAAGCAAAGAAGGTCCTCCAGG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ATTAATCCCCTAAGAAGGGTGAACAGAGCTAACTGTTCTAATGCTGGGTTAGAAATATCCTTTGGGGCCTaGAAGTCCTGGTTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: INPLRRVNRANCSNAGLEISFGA*KSWFSR
Trigger: CCGGGAAAACCAGGACTTCAAGGCCCCAAAGGATAT...TTCTAACCCAGCATTAGAACAGTTAGCTCTGTTCACCCTTCTTAGGGGATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS CCA 90 bp TACAAATCCAGGAATCTCACATGCTGTCTCCCGGTTGTTCTGTTCTaGGTCACAGTAGATTCGCAACTTTTGGACATCAAACTGAACAGT +
Preference number: 5 (lower is better)
Translates to: YKSRNLTCCLPVVLF*VTVDSQLLDIKLNS
Trigger: ACTGTTCAGTTTGATGTCCAAAAGTTGCGAATCTACTGTGACCCAGAACAGAACAACCGGGAGACAGCATGTGAGATTCCTGGATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535941.5
CDS-3UTR CAA 90 bp GCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCTGAATGAGGCATCAGACTTTCGTTCTAATATTTaGGTTTTAGGATTCCTGGCG +
Preference number: 5 (lower is better)
Translates to: AKDHRKSTMPRLLNEASDFRSNI*VLGFLA
Trigger: CGCCAGGAATCCTAAAACCAAAATATTAGAACGAAA...GTCTGATGCCTCATTCAGCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR CAA 90 bp GTTGGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTTATCTTACTATCTCTaGCTGCTTGAGCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: VGYLPEMQKTTEKAPCLGLSYYL*LLELHP
Trigger: AGGATGCAGCTCAAGCAGCAAGAGATAGTAAGATAA...GCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GGTTATCTTCCTGAGATGCAAAAGACCACAGAAAAAGCACCATGCCTAGGCTGCAAACAACGTCTTAACTaGAGGGTTAGCAAAGGTAAC +
Preference number: 5 (lower is better)
Translates to: GYLPEMQKTTEKAPCLGCKQRLN*RVSKGN
Trigger: GTTACCTTTGCTAACCCTCAAGTTAAGACGTTGTTT...GCAGCCTAGGCATGGTGCTTTTTCTGTGGTCTTTTGCATCTCAGGAAGATAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTACATGCTGTCTCCCGGTaGTTCTGTTCTGGGTCACAG +
Preference number: 5 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVHAVSR*FCSGSQ
Trigger: CTGTGACCCAGAACAGAACAACCGGGAGACAGCATG...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAAGTCCACGATCACCCTaGTCACCATCTCGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLSPRSP*SPSRPG
Trigger: ACCAGGGCGAGATGGTGACAAGGGTGATCGTGGACT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGCCTTGAATTCCCTGTaGCCCTGGAATTCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCALNSL*PWNSLS
Trigger: AGACAGGGAATTCCAGGGCAACAGGGAATTCAAGGC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACCCCAGATTCTCCTTTaGATCCAATGGCACCTCGGA +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRPQILL*IQWHLG
Trigger: TCCGAGGTGCCATTGGATCAAAAGGAGAATCTGGGG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAACCCGGGGAGCCATGTaGGGACAGGCAATGATCACA +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLTRGAM*GQAMIT
Trigger: TGTGATCATTGCCTGTCCCAACATGGCTCCCCGGGT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCCATGGTCTCCATCTTaGCCAGGGAGACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFPWSPS*PGRPGS
Trigger: AGACCCAGGTCTCCCTGGCAAAGATGGAGACCATGG...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACCATGGTCTCCATCTTaGCCAGGGAGACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLPWSPS*PGRPGS
Trigger: AGACCCAGGTCTCCCTGGCAAAGATGGAGACCATGG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAGGGGCCTGGTTGCCCTaGGATTCCAGGTTTTCCATG +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLGAWLP*DSRFSM
Trigger: CATGGAAAACCTGGAATCCAAGGGCAACCAGGCCCC...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCGGGGCCTGGTTGCCCTaGGATTCCAGGTTTTCCATG +
Preference number: 5 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFGAWLP*DSRFSM
Trigger: CATGGAAAACCTGGAATCCAAGGGCAACCAGGCCCC...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS CCA 90 bp ATTAAATCCAGGAATCTCACATGCTGTCTCCCGGTTGTTCTGTTCTaGGTCACAGTAGATTCGCAACTTTTGGACATCAAACTGAACAGT +
Preference number: 5 (lower is better)
Translates to: IKSRNLTCCLPVVLF*VTVDSQLLDIKLNS
Trigger: ACTGTTCAGTTTGATGTCCAAAAGTTGCGAATCTACTGTGACCCAGAACAGAACAACCGGGAGACAGCATGTGAGATTCCTGGATTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAACTATCTCTTGCTGCTaGAGCTGCATCCTTGACGTC +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRTISCC*SCILDV
Trigger: GACGTCAAGGATGCAGCTCAAGCAGCAAGAGATAGT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTACATGCTGTCTCCCGGTaGTTCTGTTCTGGGTCACAG +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLHAVSR*FCSGSQ
Trigger: CTGTGACCCAGAACAGAACAACCGGGAGACAGCATG...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCATTCCAGGTTCACCTTaGCTTCCCTTAGATCCCGGT +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCIPGSP*LPLDPG
Trigger: ACCGGGATCTAAGGGAAGCAAAGGTGAACCTGGAAT...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAATTCCAGGTTCACCTTaGCTTCCCTTAGATCCCGGT +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRIPGSP*LPLDPG
Trigger: ACCGGGATCTAAGGGAAGCAAAGGTGAACCTGGAAT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTAGCCCCAGGCATCCCTaGAATTCCAGGTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTSPRHP*NSRFTF
Trigger: AAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTAAGCCCCAGGCATCCCTaGAATTCCAGGTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVSPRHP*NSRFTF
Trigger: AAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCT...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
CDS TCA 90 bp CCAACACCAATAGCAAATAATGTTATCTTACTATCTCTTGCTGCTTaGGCTGCATCCTTGACGTCATCTTGGGATTTGCCATCCGTAAGT +
Preference number: 5 (lower is better)
Translates to: PTPIANNVILLSLAA*AASLTSSWDLPSVS
Trigger: ACTTACGGATGGCAAATCCCAAGATGACGTCAAGGATGCAGCTCAAGCAGCAAGAGATAGTAAGATAACATTATTTGCTATTGGTGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCTGGCCTTCCCTGTCTTaGTGTTTCCTCCTAAGTAGA +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCWPSLS*CFLLSR
Trigger: TCTACTTAGGAGGAAACACAAAGACAGGGAAGGCCA...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAATCCTTGACGTCATCTaGGGATTTGCCATCCGTAAG +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRILDVI*GFAIRK
Trigger: CTTACGGATGGCAAATCCCAAGATGACGTCAAGGAT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGTAGACGAAGGCTTGTaGGCAATAGCTCTAAGTTCG +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCVDEGL*AIALSS
Trigger: CGAACTTAGAGCTATTGCCAACAAGCCTTCGTCTAC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACCACTGGAATTCGTGTaGGACAGACAGATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRPLEFV*DRQILH
Trigger: GTGAAGAATCTGTCTGTCCAACACGAATTCCAGTGG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCTACAGGGAGCTGGAGTaGAACCTACATCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFYRELE*NLHHWD
Trigger: GTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGTA...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATACAGGGAGCTGGAGTaGAACCTACATCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLYRELE*NLHHWD
Trigger: GTCCCAGTGATGTAGGTTCAACTCCAGCTCCCTGTA...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCTCCAGGCTTACCATCTaGACCAGGTTGTCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFSRLTI*TRLSRV
Trigger: TACCCTGGACAACCTGGTCAAGATGGTAAGCCTGGA...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCACCCATTTCACCCTTaGATCCTGGCATGCCATGAA +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTHPFHP*ILACHE
Trigger: TTCATGGCATGCCAGGATCAAAGGGTGAAATGGGTG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGATCCTTTGTCTCCTTaGGCACCCATTTCACCCTTT +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCDPLSP*APISPF
Trigger: AAAGGGTGAAATGGGTGCCAAAGGAGACAAAGGATC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAGATCCTTTGTCTCCTTaGGCACCCATTTCACCCTTT +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRDPLSP*APISPF
Trigger: AAAGGGTGAAATGGGTGCCAAAGGAGACAAAGGATC...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCAGCCCCAGGCATCCCTaGAATTCCAGGTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFSPRHP*NSRFTF
Trigger: AAAGGTGAACCTGGAATTCAAGGGATGCCTGGGGCT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTACGTCATCTTGGGATTaGCCATCCGTAAGTACCACT +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTTSSWD*PSVSTT
Trigger: AGTGGTACTTACGGATGGCAAATCCCAAGATGACGT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTGATCCTTTGTCTCCTTaGGCACCCATTTCACCCTTT +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTDPLSP*APISPF
Trigger: AAAGGGTGAAATGGGTGCCAAAGGAGACAAAGGATC...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTAATCCAGGTGATCCTTaGTCTCCTTTGGCACCCATT +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTNPGDP*SPLAPI
Trigger: AATGGGTGCCAAAGGAGACAAAGGATCACCTGGATT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCATTCCAGGTTCACCTTaGCTTCCCTTAGATCCCGGT +
Preference number: 5 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFIPGSP*LPLDPG
Trigger: ACCGGGATCTAAGGGAAGCAAAGGTGAACCTGGAAT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAAGGATACCCAAACCCTaGGCTCCCTTTTTCCCCATT +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLRIPKP*APFFPI
Trigger: AATGGGGAAAAAGGGAGCCAAGGGTTTGGGTATCCT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCTTTTCCAATTTGGGTTaGCCCATTGATCAAGATCCC +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCFSNLG*PIDQDP
Trigger: GGGATCTTGATCAATGGGCAAACCCAAATTGGAAAA...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATTTTCCAATTTGGGTTaGCCCATTGATCAAGATCCC +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRFSNLG*PIDQDP
Trigger: GGGATCTTGATCAATGGGCAAACCCAAATTGGAAAA...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCTTCAAGGGATTACTGTaGGTTATCTTCCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCFKGLL*VIFLRC
Trigger: GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAA...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000488912.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAGAGCAGTACGACAACTaGATCTTACTTCCCCATCTT +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLEQYDN*ILLPHL
Trigger: AAGATGGGGAAGTAAGATCAAGTTGTCGTACTGCTC...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTATTGAACCACTCCAACTaGAATAAACTTCGGCCCTAT +
Preference number: 5 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVLNHSN*NKLRPY
Trigger: ATAGGGCCGAAGTTTATTCAAGTTGGAGTGGTTCAA...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGACCTTCTGGGAAAACATaGCTTGTGAGTTCTGATAAA +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRPSGKT*LVSSDK
Trigger: TTTATCAGAACTCACAAGCAATGTTTTCCCAGAAGG...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAAAACAACGTCTTAACTaGAGGGTTAGCAAAGGTAAC +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRKQRLN*RVSKGN
Trigger: GTTACCTTTGCTAACCCTCAAGTTAAGACGTTGTTT...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp GAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGATGCGTAGATTCGCAACTTTaGGACATCAAACTGAACAGT +
Preference number: 5 (lower is better)
Translates to: EVLKFLFKGLLLVIFLRCVDSQL*DIKLNS
Trigger: ACTGTTCAGTTTGATGTCCAAAAGTTGCGAATCTAC...GCATCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCCTGAGAGTAGATTCGCAACTTTaGGACATCAAACTGAACAGT +
Preference number: 5 (lower is better)
Translates to: TEVLKFLFKGLLLVIFLRVDSQL*DIKLNS
Trigger: ACTGTTCAGTTTGATGTCCAAAAGTTGCGAATCTAC...TCTCAGGAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS TCA 90 bp CTATTTCAAAGTTTTCTGGGCCAACACTATAAGAGCCATCTAAGATaGAAACTAAATCTGTCGGAGCAGTACGACAACTTGATCTTACTT +
Preference number: 5 (lower is better)
Translates to: LFQSFLGQHYKSHLR*KLNLSEQYDNLILL
Trigger: AAGTAAGATCAAGTTGTCGTACTGCTCCGACAGATTTAGTTTTCATCTTAGATGGCTCTTATAGTGTTGGCCCAGAAAACTTTGAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370817.3
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCTTATCTTACTATCTCTaGCTGCTTGAGCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFLSYYL*LLELHP
Trigger: AGGATGCAGCTCAAGCAGCAAGAGATAGTAAGATAA...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ATCAGCCCTGATCTTACTTCCAATGATGAGATACATGTTTTGGCTTATGTAGTACCTTCTGGGAAAACATaGCTTGTGAGTTCTGATAAA +
Preference number: 5 (lower is better)
Translates to: ISPDLTSNDEIHVLAYVVPSGKT*LVSSDK
Trigger: TTTATCAGAACTCACAAGCAATGTTTTCCCAGAAGG...TACTACATAAGCCAAAACATGTATCTCATCATTGGAAGTAAGATCAGGGCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244728.10
ENST00000370819.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTCCTTCTGGGAAAACATaGCTTGTGAGTTCTGATAAA +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTPSGKT*LVSSDK
Trigger: TTTATCAGAACTCACAAGCAATGTTTTCCCAGAAGG...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp ACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTATATTCAACTACTGGATGTAAGGGCTaGTTTTCAATTTGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: TVTKTDWLTGNGGFLYSTTGCKG*FSICWS
Trigger: TGACCAACAAATTGAAAACAAGCCCTTACATCCAGT...AGTTGAATATAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS GCA 90 bp AAGTTCAATATGAATACTTTGTTGTGTGATCTATACTTCCCTTTTTaGCATAAAATCCAGGTGATCCTTTGTCTCCTTTGGCACCCATTT +
Preference number: 5 (lower is better)
Translates to: KFNMNTLLCDLYFPF*HKIQVILCLLWHPF
Trigger: AAATGGGTGCCAAAGGAGACAAAGGATCACCTGGATTTTATGGCAAAAAGGGAAGTATAGATCACACAACAAAGTATTCATATTGAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456983.1
ENST00000469682.1
CDS-3UTR CAA 90 bp AAAAACACCGAGGTACTTAAGTTTCTTTTCAAGGGATTACTGTTGGTTATCTTCAGGGTAGTCACTATATaGAACCACTCCAACTTGAAT +
Preference number: 5 (lower is better)
Translates to: KNTEVLKFLFKGLLLVIFRVVTI*NHSNLN
Trigger: ATTCAAGTTGGAGTGGTTCAATATAGTGACTACCCT...GAAGATAACCAACAGTAATCCCTTGAAAAGAAACTTAAGTACCTCGGTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS-3UTR CAA 90 bp AAATATTTCACAGTGACTAAAACTGACTGGCTAACAGGCAATGGTGGATTTTTAACTGGATGTAAGGGCTaGTTTTCAATTTGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: KYFTVTKTDWLTGNGGFLTGCKG*FSICWS
Trigger: TGACCAACAAATTGAAAACAAGCCCTTACATCCAGT...TAAAAATCCACCATTGCCTGTTAGCCAGTCAGTTTTAGTCACTGTGAAATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS GCA 72 bp CCAACCCGAGCAAGACCTGCGCTGAAACGGATTGGCTaGCCTCCGCCCGGAGTCCGTTCTCCCTGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: PTRARPALKRIG*PPPGVRSPCSG
Trigger: GCCGCTGCAGGGAGAACGGACTCCGGGCGGAGGGCAGCCAATCCGTTTCAGCGCAGGTCTTGCTCGGGTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS TCA 72 bp GCAGTGTCCAGGCTCGGGGTTGCCGTCGCAGCCAGCTaGGTGTTGCGCCAGGGGGACAGGTATGTTCCAGGC +
Preference number: 6 (lower is better)
Translates to: AVSRLGVAVAAS*VLRQGDRYVPG
Trigger: GCCTGGAACATACCTGTCCCCCTGGCGCAACACTCAGCTGGCTGCGACGGCAACCCCGAGCCTGGACACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS GCA 72 bp CCAGGCTCGGGGTTGCCGTCGCAGCCAGCTGAGTGTTaGGCCAGGGGGACAGGTATGTTCCAGGCAGTGGCA +
Preference number: 6 (lower is better)
Translates to: PGSGLPSQPAEC*ARGTGMFQAVA
Trigger: TGCCACTGCCTGGAACATACCTGTCCCCCTGGCGCAACACTCAGCTGGCTGCGACGGCAACCCCGAGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS TCA 72 bp AGGCAGTGGCAAGCCCAACCCGAGCAAGACCTGCGCTaGAACGGATTGGCTGCCCTCCGCCCGGAGTCCGTT +
Preference number: 6 (lower is better)
Translates to: RQWQAQPEQDLR*NGLAALRPESV
Trigger: AACGGACTCCGGGCGGAGGGCAGCCAATCCGTTTCAGCGCAGGTCTTGCTCGGGTTGGGCTTGCCACTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS CCA 72 bp AAGCCCAACCCGAGCAAGACCTGCGCTGAAACGGATTaGCTGCCCTCCGCCCGGAGTCCGTTCTCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: KPNPSKTCAETD*LPSARSPFSLQ
Trigger: CTGCAGGGAGAACGGACTCCGGGCGGAGGGCAGCCAATCCGTTTCAGCGCAGGTCTTGCTCGGGTTGGGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS CAA 72 bp GTTTTAGGATTCCTGGCGCAGTGTCCAGGCTCGGGGTaGCCGTCGCAGCCAGCTGAGTGTTGCGCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: VLGFLAQCPGSG*PSQPAECCARG
Trigger: CCCCCTGGCGCAACACTCAGCTGGCTGCGACGGCAACCCCGAGCCTGGACACTGCGCCAGGAATCCTAAAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS CCA 72 bp AGGCAGTCCAGGGTCACCTTTGGGGCCTTGAAGTCCTaGTTTTCCCGGAGGACAAATACAGGGAGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: RQSRVTFGALKS*FSRRTNTGSWS
Trigger: ACTCCAGCTCCCTGTATTTGTCCTCCGGGAAAACCAGGACTTCAAGGCCCCAAAGGTGACCCTGGACTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS GCA 72 bp CTCCAGGGATCTCAGCTCACAGTAGAACCCAGTCCCTaGCTACAAATTTTCACTGTGAGCCATAAGGCTCCC +
Preference number: 6 (lower is better)
Translates to: LQGSQLTVEPSP*LQIFTVSHKAP
Trigger: GGGAGCCTTATGGCTCACAGTGAAAATTTGTAGGCAGGGACTGGGTTCTACTGTGAGCTGAGATCCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467045.5
CDS GCA 72 bp TTGTATTCCTGGAGATCCTGGAACACCTGGTGTCCCTaGAATTCCCTGATATCCTTTGGGGCCTTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: LYSWRSWNTWCP*NSLISFGALKS
Trigger: GGACTTCAAGGCCCCAAAGGATATCAGGGAATTGCAGGGACACCAGGTGTTCCAGGATCTCCAGGAATACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS CCA 72 bp TGCAATTCCCTGATATCCTTTGGGGCCTTGAAGTCCTaGTTTTCCCGGAGGACAAATACAGGGAGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: CNSLISFGALKS*FSRRTNTGSWS
Trigger: ACTCCAGCTCCCTGTATTTGTCCTCCGGGAAAACCAGGACTTCAAGGCCCCAAAGGATATCAGGGAATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456983.1
CDS TCA 72 bp GAGTATGGATTCCACTGCTGCCGTCAAATGTTCTCCTaGATCATAGCTTCCGAGAGGAATCTCCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: EYGFHCCRQMFS*IIASERNLQHR
Trigger: CCTGTGCTGGAGATTCCTCTCGGAAGCTATGATTCAGGAGAACATTTGACGGCAGCAGTGGAATCCATACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370817.3
ENST00000370819.5
ENST00000535941.5
CDS CAA 90 bp TGGCAAAAAGGTAATCGAGCGCAAACTGGATGGCCTTCCCTGTCTTaGTGTTTCCTCCTAAGTAGAGTATGGATTCCACTGCTGCCGTCA +
Preference number: 6 (lower is better)
Translates to: WQKGNRAQTGWPSLS*CFLLSRVWIPLLPS
Trigger: TGACGGCAGCAGTGGAATCCATACTCTACTTAGGAGGAAACACAAAGACAGGGAAGGCCATCCAGTTTGCGCTCGATTACCTTTTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370817.3
ENST00000370819.5
ENST00000535941.5
CDS GCA 72 bp ACTGGGACCATTAAGGCAAAATCCAGGAATCTCACATaGTGTCTCCCGGTTGTTCTGTTCTGGGTCACAGTA +
Preference number: 6 (lower is better)
Translates to: TGTIKAKSRNLT*CLPVVLFWVTV
Trigger: TACTGTGACCCAGAACAGAACAACCGGGAGACAGCATGTGAGATTCCTGGATTTTGCCTTAATGGTCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370819.5
CDS CAA 72 bp GGTAATCGAGCGCAAACTGGATGGCCTTCCCTGTCTTaGTGTTTCCTCCTAAGTAGAGTATGGATTCCACTG +
Preference number: 6 (lower is better)
Translates to: GNRAQTGWPSLS*CFLLSRVWIPL
Trigger: CAGTGGAATCCATACTCTACTTAGGAGGAAACACAAAGACAGGGAAGGCCATCCAGTTTGCGCTCGATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370817.3
ENST00000370819.5
ENST00000535941.5
CDS TCA 72 bp GAAGTCGGCCAGCTAACTCATGTGGTGGCTGCAGGTTaGGAGAAGCTCCCATCTGAAATTCGTAATATAATC +
Preference number: 6 (lower is better)
Translates to: EVGQLTHVVAAG*EKLPSEIRNII
Trigger: GATTATATTACGAATTTCAGATGGGAGCTTCTCTCAACCTGCAGCCACCACATGAGTTAGCTGGCCGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370819.5
CDS CAA 72 bp ATCTCTTGCTGCTTGAGCTGCATCCTTGACGTCATCTaGGGATTTGCCATCCGTAAGTACCACTGCTATCTT +
Preference number: 6 (lower is better)
Translates to: ISCCLSCILDVI*GFAIRKYHCYL
Trigger: AAGATAGCAGTGGTACTTACGGATGGCAAATCCCAAGATGACGTCAAGGATGCAGCTCAAGCAGCAAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS GCA 72 bp ATTAAGGCACTCTCCATTAAATCCAGGAATCTCACATaGTGTCTCCCGGTTGTTCTGTTCTGGGTCACAGTA +
Preference number: 6 (lower is better)
Translates to: IKALSIKSRNLT*CLPVVLFWVTV
Trigger: TACTGTGACCCAGAACAGAACAACCGGGAGACAGCATGTGAGATTCCTGGATTTAATGGAGAGTGCCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244728.10
CDS GCA 72 bp ACCATTAAGGCACTTTACAAATCCAGGAATCTCACATaGTGTCTCCCGGTTGTTCTGTTCTGGGTCACAGTA +
Preference number: 6 (lower is better)
Translates to: TIKALYKSRNLT*CLPVVLFWVTV
Trigger: TACTGTGACCCAGAACAGAACAACCGGGAGACAGCATGTGAGATTCCTGGATTTGTAAAGTGCCTTAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535941.5
CDS CCA 72 bp AGGAATCTCACATGCTGTCTCCCGGTTGTTCTGTTCTaGGTCACAGTAGATTCGCAACTTTTGGACATCAAA +
Preference number: 6 (lower is better)
Translates to: RNLTCCLPVVLF*VTVDSQLLDIK
Trigger: TTTGATGTCCAAAAGTTGCGAATCTACTGTGACCCAGAACAGAACAACCGGGAGACAGCATGTGAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS CAA 72 bp TCCGAGAGGAATCTCCAGCACAGGGTAGTCACTATATaGAACCACTCCAACTTGAATAAACTTCGGCCCTAT +
Preference number: 6 (lower is better)
Translates to: SERNLQHRVVTI*NHSNLNKLRPY
Trigger: ATAGGGCCGAAGTTTATTCAAGTTGGAGTGGTTCAATATAGTGACTACCCTGTGCTGGAGATTCCTCTCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370817.3
ENST00000370819.5
ENST00000535941.5
CDS CAA 72 bp ATCCCCTTTCATCACGAGCTGCCACTGGAATTCGTGTaGGACAGACAGATTCTTCACAAAGTTTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: IPFHHELPLEFV*DRQILHKVSAS
Trigger: TGAAGCAGAAACTTTGTGAAGAATCTGTCTGTCCAACACGAATTCCAGTGGCAGCTCGTGATGAAAGGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS TCA 72 bp ATCCGTAAGTACCACTGCTATCTTAGTCAGAAATCGTaGGGACTTGGCAAAAAGGTAATCGAGCGCAAACTG +
Preference number: 6 (lower is better)
Translates to: IRKYHCYLSQKS*GLGKKVIERKL
Trigger: CAGTTTGCGCTCGATTACCTTTTTGCCAAGTCCTCACGATTTCTGACTAAGATAGCAGTGGTACTTACGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS CAA 90 bp ATCATAGCTTCCGAGAGGAATCTCCAGCACAGGGTAGTCACTATATaGAACCACTCCAACTTGAATAAACTTCGGCCCTATGTCAAAGTT +
Preference number: 6 (lower is better)
Translates to: IIASERNLQHRVVTI*NHSNLNKLRPYVKV
Trigger: AACTTTGACATAGGGCCGAAGTTTATTCAAGTTGGAGTGGTTCAATATAGTGACTACCCTGTGCTGGAGATTCCTCTCGGAAGCTATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370817.3
ENST00000370819.5
ENST00000535941.5
CDS CAA 90 bp TATCTTACTATCTCTTGCTGCTTGAGCTGCATCCTTGACGTCATCTaGGGATTTGCCATCCGTAAGTACCACTGCTATCTTAGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: YLTISCCLSCILDVI*GFAIRKYHCYLSQK
Trigger: TTTCTGACTAAGATAGCAGTGGTACTTACGGATGGCAAATCCCAAGATGACGTCAAGGATGCAGCTCAAGCAGCAAGAGATAGTAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS CCA 72 bp AAGAATATCAAATCCCCTTTCATCACGAGCTGCCACTaGAATTCGTGTTGGACAGACAGATTCTTCACAAAG +
Preference number: 6 (lower is better)
Translates to: KNIKSPFITSCH*NSCWTDRFFTK
Trigger: CTTTGTGAAGAATCTGTCTGTCCAACACGAATTCCAGTGGCAGCTCGTGATGAAAGGGGATTTGATATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS TCA 72 bp AGTTTTCTGGGCCAACACTATAAGAGCCATCTAAGATaGAAACTAAATCTGTCGGAGCAGTACGACAACTTG +
Preference number: 6 (lower is better)
Translates to: SFLGQHYKSHLR*KLNLSEQYDNL
Trigger: CAAGTTGTCGTACTGCTCCGACAGATTTAGTTTTCATCTTAGATGGCTCTTATAGTGTTGGCCCAGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244728.10
ENST00000370817.3
ENST00000370819.5
ENST00000535941.5
CDS TCA 72 bp ATAGCAAATAATGTTATCTTACTATCTCTTGCTGCTTaGGCTGCATCCTTGACGTCATCTTGGGATTTGCCA +
Preference number: 6 (lower is better)
Translates to: IANNVILLSLAA*AASLTSSWDLP
Trigger: TGGCAAATCCCAAGATGACGTCAAGGATGCAGCTCAAGCAGCAAGAGATAGTAAGATAACATTATTTGCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS GCA 72 bp ATGAATACTTTGTTGTGTGATCTATACTTCCCTTTTTaGCATAAAATCCAGGTGATCCTTTGTCTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: MNTLLCDLYFPF*HKIQVILCLLW
Trigger: CCAAAGGAGACAAAGGATCACCTGGATTTTATGGCAAAAAGGGAAGTATAGATCACACAACAAAGTATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456983.1
ENST00000469682.1
CDS CAA 90 bp ACTTGTGAGCCATTAATTACGCTGGTTGTTGTAAATAATAAGATTTaGTCCACACCATTTAAGGTAACTGCTATTTGTGGCCTTCCATCA +
Preference number: 6 (lower is better)
Translates to: TCEPLITLVVVNNKI*STPFKVTAICGLPS
Trigger: TGATGGAAGGCCACAAATAGCAGTTACCTTAAATGGTGTGGACAAAATCTTATTATTTACAACAACCAGCGTAATTAATGGCTCACAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5
CDS CAA 72 bp CCATTAATTACGCTGGTTGTTGTAAATAATAAGATTTaGTCCACACCATTTAAGGTAACTGCTATTTGTGGC +
Preference number: 6 (lower is better)
Translates to: PLITLVVVNNKI*STPFKVTAICG
Trigger: GCCACAAATAGCAGTTACCTTAAATGGTGTGGACAAAATCTTATTATTTACAACAACCAGCGTAATTAATGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244728.10
ENST00000370819.5
ENST00000535941.5