RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL19A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000082293

Ensembl transcript IDs: ENST00000455415.1, ENST00000476656.1, ENST00000478620.2, ENST00000483745.1, ENST00000620364.5

Found 344 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGCAATCATCCTGTTTTAGCCAAATTGAAATCTGCACTGCTCCTTaGAGAGCTGTGAGTCCTGATTGCTGTGGCTGGCAGGCTCTTGCA +
Preference number: 1 (lower is better)
Translates to: KQSSCFSQIEICTAP*RAVSPDCCGWQALA
Trigger: TGCAAGAGCCTGCCAGCCACAGCAATCAGGACTCACAGCTCTTCAAGGAGCAGTGCAGATTTCAATTTGGCTAAAACAGGATGATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR TCA 90 bp CATAAGGATAATGGATACAAGGGCCCAAAGATCTTGCTAGGCCACTaGAGCTTTAAGAGTACCAAAGACAGCTTGGTGGCTTCACCACCA +
Preference number: 1 (lower is better)
Translates to: HKDNGYKGPKILLGH*SFKSTKDSLVASPP
Trigger: TGGTGGTGAAGCCACCAAGCTGTCTTTGGTACTCTTAAAGCTTCAGTGGCCTAGCAAGATCTTTGGGCCCTTGTATCCATTATCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 90 bp CATATCCAGTCCTGTGGTTTTCCTTTGTTGAGCTGTACCTCTTGCTaGAGCTTCTGGAGAAATACAATTCTCCTTAAGAGCTTTTGGGCT +
Preference number: 1 (lower is better)
Translates to: HIQSCGFPLLSCTSC*SFWRNTILLKSFWA
Trigger: AGCCCAAAAGCTCTTAAGGAGAATTGTATTTCTCCAGAAGCTGCAGCAAGAGGTACAGCTCAACAAAGGAAAACCACAGGACTGGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 90 bp CTAGATTTCTGCAACATCCTCATGCCCAGTGTTCTAGAGAATCAGTaGCTGCCAATCAACAGTTCCTCAATGAATGTACAGCTAACCAAC +
Preference number: 1 (lower is better)
Translates to: LDFCNILMPSVLENQ*LPINSSSMNVQLTN
Trigger: GTTGGTTAGCTGTACATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCATGAGGATGTTGCAGAAATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CCA 90 bp TCCTGTGGTTTTCCTTTGTTGAGCTGTACCTCTTGCTGCAGCTTCTaGAGAAATACAATTCTCCTTAAGAGCTTTTGGGCTTCACCTTCT +
Preference number: 1 (lower is better)
Translates to: SCGFPLLSCTSCCSF*RNTILLKSFWASPS
Trigger: AGAAGGTGAAGCCCAAAAGCTCTTAAGGAGAATTGTATTTCTCCAGAAGCTGCAGCAAGAGGTACAGCTCAACAAAGGAAAACCACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR TCA 90 bp TCTAGGACAAGTGAGTCCATTCTATACGTATCCCATCCTTTGTTTTaGTGGTGGCTTCTTGTCTTAAAGTCTGAGGGTGATGAGGTCATA +
Preference number: 1 (lower is better)
Translates to: SRTSESILYVSHPLF*WWLLVLKSEGDEVI
Trigger: TATGACCTCATCACCCTCAGACTTTAAGACAAGAAGCCACCATCAAAACAAAGGATGGGATACGTATAGAATGGACTCACTTGTCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 90 bp TATAATGAAAACCGGTTCAAATCACGGATGCATTGGAACAAACCCTaGCTTAAATTAGGCACATTCCTCAGACACAACTCTGTTCACAGC +
Preference number: 1 (lower is better)
Translates to: YNENRFKSRMHWNKP*LKLGTFLRHNSVHS
Trigger: GCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAATTTAAGGCAGGGTTTGTTCCAATGCATCCGTGATTTGAACCGGTTTTCATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 90 bp ATCTCAACTTCATTTTGTGTTAAATTAGGTGGACCCAGCATTTCTTaGTGCCCTTTGTTGCATATCATGTGTACAGAGCTGAGGCAGGAA +
Preference number: 1 (lower is better)
Translates to: ISTSFCVKLGGPSIS*CPLLHIMCTELRQE
Trigger: TTCCTGCCTCAGCTCTGTACACATGATATGCAACAAAGGGCAGCAAGAAATGCTGGGTCCACCTAATTTAACACAAAATGAAGTTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 90 bp TCAACTTCATTTTGTGTTAAATTAGGTGGACCCAGCATTTCTTGCTaGCCTTTGTTGCATATCATGTGTACAGAGCTGAGGCAGGAAAAA +
Preference number: 1 (lower is better)
Translates to: STSFCVKLGGPSISC*PLLHIMCTELRQEK
Trigger: TTTTTCCTGCCTCAGCTCTGTACACATGATATGCAACAAAGGGCAGCAAGAAATGCTGGGTCCACCTAATTTAACACAAAATGAAGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CCA 90 bp AGTTCATTAATCTATAATGAAAACCGGTTCAAATCACGGATGCATTaGAACAAACCCTGCCTTAAATTAGGCACATTCCTCAGACACAAC +
Preference number: 1 (lower is better)
Translates to: SSLIYNENRFKSRMH*NKPCLKLGTFLRHN
Trigger: GTTGTGTCTGAGGAATGTGCCTAATTTAAGGCAGGGTTTGTTCCAATGCATCCGTGATTTGAACCGGTTTTCATTATAGATTAATGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CCA 90 bp ACGCTGGGAAACTGCGACAGTAAACACTTGTGTGTCTTCAGAAGGTaGATACAGACAAGTATGAAAAATAATTTAAGAACAAGAGCAATG +
Preference number: 1 (lower is better)
Translates to: TLGNCDSKHLCVFRR*IQTSMKNNLRTRAM
Trigger: CATTGCTCTTGTTCTTAAATTATTTTTCATACTTGTCTGTATCCACCTTCTGAAGACACACAAGTGTTTACTGTCGCAGTTTCCCAGCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR TCA 90 bp TCACATGGAATCCAAGGTCATTACAATTTCAGAATCAAACAGGAGTaGAACATCTTATTGAATGGGGAAGTGAATCTGTCATCTTTACAG +
Preference number: 1 (lower is better)
Translates to: SHGIQGHYNFRIKQE*NILLNGEVNLSSLQ
Trigger: CTGTAAAGATGACAGATTCACTTCCCCATTCAATAAGATGTTTCACTCCTGTTTGATTCTGAAATTGTAATGACCTTGGATTCCATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455415.1
3UTR-3UTR GCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTGTGAGTCCTGATTaGTGTGGCTGGCAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWAVSPD*CGWQAL
Trigger: AAGAGCCTGCCAGCCACAGCAATCAGGACTCACAGC...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR TCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGCTCCTTGAAGAGCTGTaGGTCCTGATTGCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWLLEEL*VLIAVA
Trigger: AGCCACAGCAATCAGGACTCACAGCTCTTCAAGGAG...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATCCAAAGACAGCTTGGTaGCTTCACCACCAAGCACCT +
Preference number: 2 (lower is better)
Translates to: MPSVLENQCLPINSSSMNPKTAW*LHHQAP
Trigger: AGGTGCTTGGTGGTGAAGCCACCAAGCTGTCTTTGG...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR GCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTTCAGTAGTTGGCTATaGTGGGTGTTTGGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: MPSVLENQCLPINSSSMNFSSWL*WVFGLP
Trigger: AGGGAGCCCAAACACCCAGCATAGCCAACTACTGAA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR GCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGGGTCTGAGCACTAGTTaGATATCCAGTCCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: DKWRYITGSQQMRQTAERGLSTS*ISSPVV
Trigger: AACCACAGGACTGGATATGCAACTAGTGCTCAGACC...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGAGTAGTTGGCTATGCTaGGTGTTTGGGCTCCCTGAT +
Preference number: 2 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWSSWLC*VFGLPD
Trigger: ATCAGGGAGCCCAAACACCCAGCATAGCCAACTACT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR GCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTTGAGCTGTACCTCTTaGTGCAGCTTCTGGAGAAAT +
Preference number: 2 (lower is better)
Translates to: DKWRYITGSQQMRQTAERLSCTS*CSFWRN
Trigger: ATTTCTCCAGAAGCTGCAGCAAGAGGTACAGCTCAA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGGCATATCCAGTCCTGTaGTTTTCCTTTGTTGAGCTG +
Preference number: 2 (lower is better)
Translates to: DKWRYITGSQQMRQTAERAYPVL*FSFVEL
Trigger: CAGCTCAACAAAGGAAAACCACAGGACTGGATATGC...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR TCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATGTGAACTCTTTGGTCTaGGCACTAGTTGCATATCCA +
Preference number: 2 (lower is better)
Translates to: MPSVLENQCLPINSSSMNVNSLV*ALVAYP
Trigger: TGGATATGCAACTAGTGCTCAGACCAAAGAGTTCAC...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR TCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAACAGGTTCCCAACAGATaGGACAGACTGCAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQQVPNR*DRLQKG
Trigger: GCCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTG...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR GCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGAGCTGTACCTCTTGCTaGAGCTTCTGGAGAAATACA +
Preference number: 2 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWSCTSC*SFWRNT
Trigger: TGTATTTCTCCAGAAGCTGCAGCAAGAGGTACAGCT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR GCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATGGCTGGCAGGCTCTTaGAGCATGTTCTCACATCTG +
Preference number: 2 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQWLAGS*SMFSHL
Trigger: CAGATGTGAGAACATGCTGCAAGAGCCTGCCAGCCA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAGTACCAAAGACAGCTTaGTGGCTTCACCACCAAGCA +
Preference number: 2 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQVPKTA*WLHHQA
Trigger: TGCTTGGTGGTGAAGCCACCAAGCTGTCTTTGGTAC...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGAAATCACGGATGCATTaGAACAAACCCTGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: DKWRYITGSQQMRQTAERKSRMH*NKPCLK
Trigger: TTTAAGGCAGGGTTTGTTCCAATGCATCCGTGATTT...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTGGAATGGAATAAAATaGTGCAAGGGATTTGGCAAC +
Preference number: 2 (lower is better)
Translates to: DKWRYITGSQQMRQTAERWNGIK*CKGFGN
Trigger: GTTGCCAAATCCCTTGCACCATTTTATTCCATTCCA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR GCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTGTTCTAGAGAATCAGTaGCTGCCAATCAACAGTTCC +
Preference number: 2 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFVLENQ*LPINSS
Trigger: GGAACTGTTGATTGGCAGGCACTGATTCTCTAGAAC...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTTTAAGAGAGCTCCAGTaGCAAGGAAATGTTACCAGG +
Preference number: 2 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFLRELQ*QGNVTR
Trigger: CCTGGTAACATTTCCTTGCCACTGGAGCTCTCTTAA...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CAA 90 bp CAATTCTCCTTAAGAGCTTTTGGGCTTCACCTTCTTAACATGCATTaGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTC +
Preference number: 2 (lower is better)
Translates to: QFSLRAFGLHLLNMH*LTLHIHLLGQVSPF
Trigger: GAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATGTTAAGAAGGTGAAGCCCAAAAGCTCTTAAGGAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR TCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATCATGTGTACAGAGCTaGGGCAGGAAAAAGTATCTG +
Preference number: 2 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQSCVQS*GRKKYL
Trigger: CAGATACTTTTTCCTGCCTCAGCTCTGTACACATGA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATAATCATTTCAGTAGTTaGCTATGCTGGGTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHNHFSS*LCWVFG
Trigger: CCCAAACACCCAGCATAGCCAACTACTGAAATGATT...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTTCTTGCTGCAGCTTCTaGAGAAATACAATTCTCCTT +
Preference number: 2 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFSCCSF*RNTILL
Trigger: AAGGAGAATTGTATTTCTCCAGAAGCTGCAGCAAGA...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR GCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAACATGCCAGTGGTGATTaGTTTGAATTGAGCTCATTA +
Preference number: 2 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQHASGD*FELSSL
Trigger: TAATGAGCTCAATTCAAAGCAATCACCACTGGCATG...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR GCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAACATTGGAACAAACCCTaGCTTAAATTAGGCACATTC +
Preference number: 2 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQHWNKP*LKLGTF
Trigger: GAATGTGCCTAATTTAAGGCAGGGTTTGTTCCAATG...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATTTTTTCCAATGTCAGTaGGCTAGCCTTTCTAAACTC +
Preference number: 2 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHFFQCQ*ASLSKL
Trigger: GAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAA...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR TCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATACAAAACTGGAATTTaGTACTCCCTTTTCATGCAG +
Preference number: 2 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQYKTGI*YSLFMQ
Trigger: CTGCATGAAAAGGGAGTATCAAATTCCAGTTTTGTA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR TCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATTTAACATGCATTTGCTaGCACTACACATTCATCTTC +
Preference number: 2 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHLTCIC*HYTFIF
Trigger: GAAGATGAATGTGTAGTGTCAGCAAATGCATGTTAA...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR GCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAAATGGAATAAAATGGTaGAAGGGATTTGGCAACCAT +
Preference number: 2 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQNGIKW*KGFGNH
Trigger: ATGGTTGCCAAATCCCTTGCACCATTTTATTCCATT...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATGATGAGTCTACAAAATaGATATCATCATCAGTCTAC +
Preference number: 2 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHDESTK*ISSSVY
Trigger: GTAGACTGATGATGATATCCATTTTGTAGACTCATC...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATTAAACACCATCTTGTaGACAAATGGAGGTATATCA +
Preference number: 2 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQLNTIL*TNGGIS
Trigger: TGATATACCTCCATTTGTCCACAAGATGGTGTTTAA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CAA 90 bp CCTTTTCATGCAGTACTTATTCATGCCAGTGGTGATTGCTTTGAATaGAGCTCATTATACAGAATTAACAAAATCATTTCAGTAGTTGGC +
Preference number: 2 (lower is better)
Translates to: PFHAVLIHASGDCFE*SSLYRINKIISVVG
Trigger: GCCAACTACTGAAATGATTTTGTTAATTCTGTATAATGAGCTCAATTCAAAGCAATCACCACTGGCATGAATAAGTACTGCATGAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CAA 90 bp ACATGTAGGAATCAAGGCCTCAAAGCATTATGCCCATGTGGGATTTaGAATAAAACTAATGCCATTGCACTTAACATGAGTATATTCAAT +
Preference number: 2 (lower is better)
Translates to: TCRNQGLKALCPCGI*NKTNAIALNMSIFN
Trigger: ATTGAATATACTCATGTTAAGTGCAATGGCATTAGTTTTATTCAAAATCCCACATGGGCATAATGCTTTGAGGCCTTGATTCCTACATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CCA 72 bp GCCACTGAAGCTTTAAGAGTACCAAAGACAGCTTGGTaGCTTCACCACCAAGCACCTTGTAGGGAAAACAGC +
Preference number: 3 (lower is better)
Translates to: ATEALRVPKTAW*LHHQAPCRENS
Trigger: GCTGTTTTCCCTACAAGGTGCTTGGTGGTGAAGCCACCAAGCTGTCTTTGGTACTCTTAAAGCTTCAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR TCA 72 bp TCCTGTTTTAGCCAAATTGAAATCTGCACTGCTCCTTaGAGAGCTGTGAGTCCTGATTGCTGTGGCTGGCAG +
Preference number: 3 (lower is better)
Translates to: SCFSQIEICTAP*RAVSPDCCGWQ
Trigger: CTGCCAGCCACAGCAATCAGGACTCACAGCTCTTCAAGGAGCAGTGCAGATTTCAATTTGGCTAAAACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CAA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATAGTACCAAAGACAGCTaGGTGGCTTCACCACCAAGC +
Preference number: 3 (lower is better)
Translates to: MPSVLENQCLPINSSSMNSTKDS*VASPPS
Trigger: GCTTGGTGGTGAAGCCACCAAGCTGTCTTTGGTACT...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR TCA 72 bp AATGGATACAAGGGCCCAAAGATCTTGCTAGGCCACTaGAGCTTTAAGAGTACCAAAGACAGCTTGGTGGCT +
Preference number: 3 (lower is better)
Translates to: NGYKGPKILLGH*SFKSTKDSLVA
Trigger: AGCCACCAAGCTGTCTTTGGTACTCTTAAAGCTTCAGTGGCCTAGCAAGATCTTTGGGCCCTTGTATCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR TCA 72 bp GGACATGGTTTTAGAGTGGGTGTGAACTCTTTGGTCTaGGCACTAGTTGCATATCCAGTCCTGTGGTTTTCC +
Preference number: 3 (lower is better)
Translates to: GHGFRVGVNSLV*ALVAYPVLWFS
Trigger: GGAAAACCACAGGACTGGATATGCAACTAGTGCTCAGACCAAAGAGTTCACACCCACTCTAAAACCATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 72 bp TGTTCTCACATCTGTGGGACCCACCATCTAGATTTCTaGAACATCCTCATGCCCAGTGTTCTAGAGAATCAG +
Preference number: 3 (lower is better)
Translates to: CSHICGTHHLDF*NILMPSVLENQ
Trigger: CTGATTCTCTAGAACACTGGGCATGAGGATGTTGCAGAAATCTAGATGGTGGGTCCCACAGATGTGAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGACAGATGATGAGGGTTaGACGGTATTAAGAGAGCTC +
Preference number: 3 (lower is better)
Translates to: DKWRYITGSQQMRQTAERTDDEG*TVLREL
Trigger: GAGCTCTCTTAATACCGTCAAACCCTCATCATCTGT...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAGGCTATGCTGGGTGTTaGGGCTCCCTGATAAAACAG +
Preference number: 3 (lower is better)
Translates to: HAFADTTHSSSRTSESILGYAGC*GSLIKQ
Trigger: CTGTTTTATCAGGGAGCCCAAACACCCAGCATAGCC...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTCTTGCTGCCCTTTGTaGCATATCATGTGTACAGAG +
Preference number: 3 (lower is better)
Translates to: DKWRYITGSQQMRQTAERSCCPL*HIMCTE
Trigger: CTCTGTACACATGATATGCAACAAAGGGCAGCAAGA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 72 bp TGCAACATCCTCATGCCCAGTGTTCTAGAGAATCAGTaGCTGCCAATCAACAGTTCCTCAATGAATGTACAG +
Preference number: 3 (lower is better)
Translates to: CNILMPSVLENQ*LPINSSSMNVQ
Trigger: CTGTACATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCATGAGGATGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CCA 72 bp GATGATGAGGGTTTGACGGTATTAAGAGAGCTCCAGTaGCAAGGAAATGTTACCAGGAACCAAGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: DDEGLTVLRELQ*QGNVTRNQVFF
Trigger: GAAGAAGACTTGGTTCCTGGTAACATTTCCTTGCCACTGGAGCTCTCTTAATACCGTCAAACCCTCATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 72 bp AACCGGTTCAAATCACGGATGCATTGGAACAAACCCTaGCTTAAATTAGGCACATTCCTCAGACACAACTCT +
Preference number: 3 (lower is better)
Translates to: NRFKSRMHWNKP*LKLGTFLRHNS
Trigger: AGAGTTGTGTCTGAGGAATGTGCCTAATTTAAGGCAGGGTTTGTTCCAATGCATCCGTGATTTGAACCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 72 bp TTTTGTGTTAAATTAGGTGGACCCAGCATTTCTTGCTaGCCTTTGTTGCATATCATGTGTACAGAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: FCVKLGGPSISC*PLLHIMCTELR
Trigger: CCTCAGCTCTGTACACATGATATGCAACAAAGGGCAGCAAGAAATGCTGGGTCCACCTAATTTAACACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CCA 72 bp TTTCCTTTGTTGAGCTGTACCTCTTGCTGCAGCTTCTaGAGAAATACAATTCTCCTTAAGAGCTTTTGGGCT +
Preference number: 3 (lower is better)
Translates to: FPLLSCTSCCSF*RNTILLKSFWA
Trigger: AGCCCAAAAGCTCTTAAGGAGAATTGTATTTCTCCAGAAGCTGCAGCAAGAGGTACAGCTCAACAAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CAA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATGTGGTTTTCCTTTGTaGAGCTGTACCTCTTGCTGC +
Preference number: 3 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQCGFPL*SCTSCC
Trigger: GCAGCAAGAGGTACAGCTCAACAAAGGAAAACCACA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CAA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATCCTGTGGTTTTCCTTaGTTGAGCTGTACCTCTTGC +
Preference number: 3 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQSCGFP*LSCTSC
Trigger: GCAAGAGGTACAGCTCAACAAAGGAAAACCACAGGA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR TCA 72 bp AGTGAGTCCATTCTATACGTATCCCATCCTTTGTTTTaGTGGTGGCTTCTTGTCTTAAAGTCTGAGGGTGAT +
Preference number: 3 (lower is better)
Translates to: SESILYVSHPLF*WWLLVLKSEGD
Trigger: ATCACCCTCAGACTTTAAGACAAGAAGCCACCATCAAAACAAAGGATGGGATACGTATAGAATGGACTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR GCA 72 bp GAGGTATATCACAGGTTCCCAACAGATGAGACAGACTaGAGAAAGGCTAAATCTTACCTAACTCATAAAACA +
Preference number: 3 (lower is better)
Translates to: EVYHRFPTDETD*RKAKSYLTHKT
Trigger: TGTTTTATGAGTTAGGTAAGATTTAGCCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR-3UTR CAA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATCTTCTTAACATGCATTaGCTGACACTACACATTCAT +
Preference number: 3 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHLLNMH*LTLHIH
Trigger: ATGAATGTGTAGTGTCAGCAAATGCATGTTAAGAAG...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CCA 72 bp AGTTCTTCTGAACAAATTGTTTTAAACACCATCTTGTaGACAAATGGAGGTATATCACAGGTTCCCAACAGA +
Preference number: 3 (lower is better)
Translates to: SSSEQIVLNTIL*TNGGISQVPNR
Trigger: TCTGTTGGGAACCTGTGATATACCTCCATTTGTCCACAAGATGGTGTTTAAAACAATTTGTTCAGAAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATCCCTCAGAGGCGCAGTaGAGTCCGGACAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNPSEAQ*SPDRAA
Trigger: CGCAGCCCTGTCCGGACTCCACTGCGCCTCTGAGGG...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGGAGCCTGGAGGGCCTTaGTGGCCAGGGGATCCCATG +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAEREPGGP*WPGDPM
Trigger: CATGGGATCCCCTGGCCACCAAGGCCCTCCAGGCTC...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATACCAGGTGGTCCAGGTaGTCCGGGTTTCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNTRWSR*SGFPRG
Trigger: CCCCCTGGGAAACCCGGACCACCTGGACCACCTGGT...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAGCCCGGGAGGGCCTATaGTCCCACCCGGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQAREGL*SHPDLP
Trigger: AGGGAGATCCGGGTGGGATCATAGGCCCTCCCGGGC...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGCTCCAGGCTTACCCATaGTGCCCTGAGCACCTGGTA +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERLQAYP*CPEHLV
Trigger: TACCAGGTGCTCAGGGCATCATGGGTAAGCCTGGAG...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTGGCAAACCCAGAGCTaGAGTCCCAGGAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERWQTQS*SPRKTW
Trigger: CCAGGTCTTCCTGGGACTTCAGCTCTGGGTTTGCCA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATCTGCATCAGCCGGAATaGCAGGGATGCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNLHQPE*QGCLES
Trigger: GCTCTCCAGGCATCCCTGGCATTCCGGCTGATGCAG...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTCCTCTTTCACCCTTTaGCCCACGTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERSSFTL*PTWTRC
Trigger: GCACCTGGTCCACGTGGGCCAAAGGGTGAAAGAGGA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTCTCCAGCTGGTCCTTaGGCGCCTGTTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNSPAGP*APVLPG
Trigger: TCCTGGCAGAACAGGCGCCCAAGGACCAGCTGGAGA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGCGGGCCTGGAGCACCTaGAATGCCTGGAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERRAWST*NAWNSL
Trigger: CAAGGAATTCCAGGCATTCCAGGTGCTCCAGGCCCG...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTGGGTCCAGTCGGGCCTaGAGCACCTGGAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFGSSRA*STWNAW
Trigger: CCAGGCATTCCAGGTGCTCCAGGCCCGACTGGACCC...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGGCCAGGGGATCCCATaGAGCCCTTGTTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWGQGIP*SPCFLV
Trigger: CACCAGGAAACAAGGGCTCCATGGGATCCCCTGGCC...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTGGGTCCAGGGTCTCCTaGTGGCCCAGGCAACCCATC +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFGSRVS*WPRQPI
Trigger: GATGGGTTGCCTGGGCCACCAGGAGACCCTGGACCC...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGAGCCCCGCTCTCCTTTaGTTCCCTTTGGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWSPALL*FPLVPL
Trigger: GAGAGGGACCAAAGGGAAGCAAAGGAGAGCGGGGCT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGTATTCCTGGGGGACCTaGTGGGCCTCGATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWYSWGT*WASISL
Trigger: AAGGGAGATCGAGGCCCAGCAGGTCCCCCAGGAATA...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGGCTGTGAGTCCTGATTaGTGTGGCTGGCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERAVSPD*CGWQAL
Trigger: AAGAGCCTGCCAGCCACAGCAATCAGGACTCACAGC...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTCCTTTTGGGCCAGGTaGACCATGAGGACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERSFWAR*TMRTQV
Trigger: GACTTGGGTCCTCATGGTCCACCTGGCCCAAAAGGA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATCTCACCTTTTGGACCTaGAAGCCCGGGAGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNLTFWT*KPGRAY
Trigger: ATAGGCCCTCCCGGGCTTCCAGGTCCAAAAGGTGAG...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTGGCAGGCTTTTCCCTaGAGGACCAGCCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERWQAFP*RTSLTF
Trigger: AAAGGTGAGGCTGGTCCTCCAGGGAAAAGCCTGCCA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATGCCAGGAGGACCGGGTaGCCCTGGGTAACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHARRTG*PWVTGN
Trigger: GTTCCCAGTTACCCAGGGCCACCCGGTCCTCCTGGC...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATTCCCCTGGAACTCCTaGAGGCCCTGGGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQFPWNS*RPWGTR
Trigger: CCTGGTGCCCCAGGGCCTCCAGGAGTTCCAGGGGAA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGCAACCCATCCTTCCCTaGTGGCCCAGGTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWQPILP*WPRSPI
Trigger: TATGGGAGACCTGGGCCACCAGGGAAGGATGGGTTG...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGCACAGGCTTGCCATCTaGAGCTCGCGTAGCAATAAC +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERHRLAI*SSRSNN
Trigger: GTTATTGCTACGCGAGCTTCAGATGGCAAGCCTGTG...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATCCTTTATGCCCTTTCTaGCCAGGTGAACCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNPLCPF*PGEPGA
Trigger: AGCTCCGGGTTCACCTGGGCAGAAAGGGCATAAAGG...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTTCCTGGCAACCCCATTaGACCAGGCTCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFSWQPH*TRLSHW
Trigger: CCAGTGGGAGAGCCTGGTGCAATGGGGTTGCCAGGA...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTATGGGCCTATGTCCCCTaGGGAACCGTGAACACCTGG +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILWAYVP*GTVNTW
Trigger: CCAGGTGTTCACGGTTCCCCAGGGGACATAGGCCCA...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATTGGTCCCTCTCTTCCTaGGATTCCTGGAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYWSLSS*DSWRTP
Trigger: CGGGGTCCTCCAGGAATCCCAGGAAGAGAGGGACCA...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGCACCTTTTGCTCCTGTaGGACCAGGATGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERHLLLL*DQDVQF
Trigger: GAACTGGACATCCTGGTCCCACAGGAGCAAAAGGTG...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAACCAGGCTCTCCCACTaGGCCAGGATCGCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILTRLSH*ARIAFW
Trigger: CCAAAAGGCGATCCTGGCCCAGTGGGAGAGCCTGGT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTTCCAGGGTCTCCTGGTaGCCCAGGCAACCCATCCTT +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFSRVSW*PRQPIL
Trigger: AAGGATGGGTTGCCTGGGCCACCAGGAGACCCTGGA...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGAAGACCTGGACTCCCTaGCAGCCCAATTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWKTWTP*QPNSRF
Trigger: GAACCTGGAATTGGGCTGCCAGGGAGTCCAGGTCTT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGCCAAGTTTGTGCCACTaGCGATCAAACAAAGGACGG +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERPSLCH*RSNKGR
Trigger: CCGTCCTTTGTTTGATCGTCAGTGGCACAAACTTGG...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATTCCCCTGGGGAACCGTaGACACCTGGAAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYSPGEP*TPGSPL
Trigger: AAGAGGACTTCCAGGTGTTCACGGTTCCCCAGGGGA...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATAGACCTCGAGGACCCTaGATACCTGGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYRPRGP*IPGSPA
Trigger: AGCTGGAGAGCCAGGTATTCAGGGTCCTCGAGGTCT...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATGGGTCCCATGGAGCCTaGAGATCCTTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYGSHGA*RSLLTL
Trigger: AAGGGTCAGCAAGGATCTGCAGGCTCCATGGGACCC...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATGCCCTTTTCACCTTTTaGTCCTGTGGGACCAGGATG +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNALFTF*SCGTRM
Trigger: CATCCTGGTCCCACAGGAGCAAAAGGTGAAAAGGGC...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTTCAATTCCCACCTGTaGGCTGATGGGCATGAGACA +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERFNSHL*ADGHET
Trigger: TGTCTCATGCCCATCAGCGCACAGGTGGGAATTGAA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGACCCTCTTTTCCAGGTaGACCTTGGGGGCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWTLFSR*TLGALY
Trigger: ATACAAGGCCCCCAAGGTCCACCTGGAAAAGAGGGT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAGTCCTCTGGGTCCCATaGAGCCTGCAGATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILVLWVP*SLQILA
Trigger: AGCAAGGATCTGCAGGCTCCATGGGACCCAGAGGAC...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATACCCTTTGGCCCACGTaGACCAGGTGCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYTLWPT*TRCSRI
Trigger: AATCCTGGAGCACCTGGTCCACGTGGGCCAAAGGGT...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATCCTGGAGGACCCCGTaGCCCTATATCACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQSWRTP*PYITLP
Trigger: CGGAAGGGTGATATAGGGCCACGGGGTCCTCCAGGA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAAGGACCGGGTGGCCCTaGGTAACTGGGAACATTCAC +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILRTGWP*VTGNIH
Trigger: GTGAATGTTCCCAGTTACCCAGGGCCACCCGGTCCT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATCCTGGGGGACCTGCTaGGCCTCGATCTCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQSWGTC*ASISLY
Trigger: GTAAAGGGAGATCGAGGCCCAGCAGGTCCCCCAGGA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTGCCCTTGTTTCCTGGTaGACCCATAGGACCGATGGC +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFALVSW*THRTDG
Trigger: GCCATCGGTCCTATGGGTCCACCAGGAAACAAGGGC...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAACCCATCCTTCCCTGGTaGCCCAGGTCTCCCATAAGC +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQPILPW*PRSPIS
Trigger: GCTTATGGGAGACCTGGGCCACCAGGGAAGGATGGG...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAAGTCCCAGGAAGACCTaGACTCCCTGGCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILSPRKT*TPWQPN
Trigger: ATTGGGCTGCCAGGGAGTCCAGGTCTTCCTGGGACT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTCTCAGGATAGGGCATaGCTCTTCTGTCTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNSQDRA*LFCLVP
Trigger: AGGGACAAGACAGAAGAGTCATGCCCTATCCTGAGA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTCTCCCTCTGTGGCTTaGAACATAAATTCCACCACC +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERSPSVA*NINSTT
Trigger: GGTGGTGGAATTTATGTTTCAAGCCACAGAGGGAGA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTACCTGCAGATCCTTGCTaGCCCTTTAGTCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILPADPC*PFSPGL
Trigger: AAGCCCAGGACTAAAGGGTCAGCAAGGATCTGCAGG...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGATGCCTGGAATTCCTTaGAGACCCTCATCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWMPGIP*RPSSPF
Trigger: GAAAGGCGATGAGGGTCTTCAAGGAATTCCAGGCAT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTATCCCCGTTCACCTTGTaGGCCTCTGTCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILSPFTL*ASVSWN
Trigger: ATTCCAGGAGACAGAGGCTCACAAGGTGAACGGGGA...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATGGCAGCCAACATTGCTaGTGGCAGCTTGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHGSQHC*WQLELG
Trigger: TCCCAGCTCAAGCTGCCAGCAGCAATGTTGGCTGCC...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTCAATCCAACATCTCCTaGCGGTCCTCTGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFQSNIS*RSSGSH
Trigger: ATGGGACCCAGAGGACCGCCAGGAGATGTTGGATTG...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGTACCAAAGACAGCTTaGTGGCTTCACCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWVPKTA*WLHHQA
Trigger: TGCTTGGTGGTGAAGCCACCAAGCTGTCTTTGGTAC...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATCCTTGCTCTCCCTTTTaGCCAGGGAATCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHPCSPF*PGNPGA
Trigger: TGCTCCAGGATTCCCTGGTCAAAAGGGAGAGCAAGG...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGTGCCACAGAAATTCTTaGGCAAAGCACCGATGTCTC +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWCHRNS*AKHRCL
Trigger: GAGACATCGGTGCTTTGCTCAAGAATTTCTGTGGCA...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATTCTCCTGGAATCCCCTaGTCACCACGTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYSPGIP*SPRSPL
Trigger: CAAAGGAGAACGTGGTGATCAGGGGATTCCAGGAGA...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTTTGCTGCTGGCAGCTTaGGCTGGGATAGGAATACAG +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFLLLAA*AGIGIQ
Trigger: CTGTATTCCTATCCCAGCTCAAGCTGCCAGCAGCAA...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTACTCCTTGAAGAGCTGTaGGTCCTGATTGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILLLEEL*VLIAVA
Trigger: AGCCACAGCAATCAGGACTCACAGCTCTTCAAGGAG...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTACAGGTTCCCAACAGATaGGACAGACTGCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILQVPNR*DRLQKG
Trigger: GCCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTG...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTACTTGGGCGCCTGTTCTaGCAGGAATTCCTATCCCTT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILLGRLF*QEFLSL
Trigger: AAGGGATAGGAATTCCTGGCAGAACAGGCGCCCAAG...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATTTTCCCGACATCCCTaGTATTCCTGGGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQFSRHP*YSWGTC
Trigger: GCAGGTCCCCCAGGAATAGCAGGGATGTCGGGAAAA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATTGGGCAGCCAACATTaGTGCTGGCAGCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQLGSQH*CWQLEL
Trigger: CAGCTCAAGCTGCCAGCAGCAATGTTGGCTGCCCAA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTTGGCTGGCAGGCTCTTaGAGCATGTTCTCACATCTG +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFWLAGS*SMFSHL
Trigger: CAGATGTGAGAACATGCTGCAAGAGCCTGCCAGCCA...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTTCGTACTCGAAACATaGCAGCTACTGAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERFVLET*QLLSTP
Trigger: AGGAGTACTCAGTAGCTGCCATGTTTCGAGTACGAA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAAGGACCCTGAATACCTaGCTCTCCAGCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQRTLNT*LSSWSL
Trigger: CAAGGACCAGCTGGAGAGCCAGGTATTCAGGGTCCT...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTCACCCTTCCGGGCCATaGAATCATACTTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFHPSGP*NHTFQA
Trigger: AGCCTGGAAAGTATGATTCCATGGCCCGGAAGGGTG...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAGTGGCCCTGGGTAACTaGGAACATTCACACCTCCCT +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQVALGN*EHSHLP
Trigger: AGGGAGGTGTGAATGTTCCCAGTTACCCAGGGCCAC...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATCATGCCTGTAAGGCCTaGTTTTCCCCGTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYHACKA*FSPFTL
Trigger: CAAGGTGAACGGGGAAAACCAGGCCTTACAGGCATG...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAGGAGCCCTTGTTTCCTaGTGGACCCATAGGACCGAT +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQGALVS*WTHRTD
Trigger: ATCGGTCCTATGGGTCCACCAGGAAACAAGGGCTCC...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATGCTGGCAGCTTGAGCTaGGATAGGAATACAGCCATC +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYAGSLS*DRNTAI
Trigger: GATGGCTGTATTCCTATCCCAGCTCAAGCTGCCAGC...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATAGTCTCATTGTGCCTTaGAACCATGTGAACGGCCAC +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYSLIVP*NHVNGH
Trigger: GTGGCCGTTCACATGGTTTCAAGGCACAATGAGACT...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATTGCCTTGAAACCATGTaGACGGCCACGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYCLETM*TATDLE
Trigger: TTCAAGATCCGTGGCCGTTCACATGGTTTCAAGGCA...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATAAACATGGCAGCTACTaGGTACTCCTCAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHKHGSY*VLLRKA
Trigger: GGCCTTCCTGAGGAGTACTCAGTAGCTGCCATGTTT...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTCACAACATGTTTCTTaGGCTATGAGGTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERSQHVS*AMRFAL
Trigger: CAGTGCAAACCTCATAGCTCAAGAAACATGTTGTGA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGGACATTTTACTGGCATaGGCAGTTACCCATGATGAT +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERDILLA*AVTHDD
Trigger: ATCATCATGGGTAACTGCTCATGCCAGTAAAATGTC...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAATCTGCACTGCTCCTTaGAGAGCTGTGAGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILICTAP*RAVSPD
Trigger: ATCAGGACTCACAGCTCTTCAAGGAGCAGTGCAGAT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTTTCCAAAGCCATCCTaGTCTGGGCACTTAGTATCT +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNFPKPS*SGHLVS
Trigger: AGATACTAAGTGCCCAGAGCAGGATGGCTTTGGAAA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTTTCAGTAGTTGGCTATaGTGGGTGTTTGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFFSSWL*WVFGLP
Trigger: AGGGAGCCCAAACACCCAGCATAGCCAACTACTGAA...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATAGCTGTACCTCTTGCTaGAGCTTCTGGAGAAATACA +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNSCTSC*SFWRNT
Trigger: TGTATTTCTCCAGAAGCTGCAGCAAGAGGTACAGCT...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTTGAGCTGTACCTCTTaGTGCAGCTTCTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNLSCTS*CSFWRN
Trigger: ATTTCTCCAGAAGCTGCAGCAAGAGGTACAGCTCAA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATCTTGCTGCCCTTTGTTaGATATCATGTGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNLAALC*ISCVQS
Trigger: GCTCTGTACACATGATATGCAACAAAGGGCAGCAAG...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTTGTTTGGAATGCACTaGCACTGGTCTTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERLFGMH*HWSLSS
Trigger: GGAACTTAAAGACCAGTGCCAGTGCATTCCAAACAA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATAATTCCTATCCCTTGTaGGCCTATGTCCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHNSYPL*AYVPWG
Trigger: TCCCCAGGGGACATAGGCCCACAAGGGATAGGAATT...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATAACTCCATCATTCCCTaGAGTCCCTGGAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHNSIIP*SPWSSW
Trigger: CCAGGAACTCCAGGGACTCCAGGGAATGATGGAGTT...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATGTTGCTTTTCAGCCCTaGGACACTGGCTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHVAFQP*DTGLAV
Trigger: AACTGCCAAGCCAGTGTCCCAGGGCTGAAAAGCAAC...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAAGCACCTGGAATGCCTaGAATTCCTTGAAGACCCTC +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILSTWNA*NSLKTL
Trigger: GAGGGTCTTCAAGGAATTCCAGGCATTCCAGGTGCT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTAAATGGAATACCAGGTaGTCCAGGTGGTCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFKWNTR*SRWSGF
Trigger: AAACCCGGACCACCTGGACCACCTGGTATTCCATTT...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGGTTTCGTTCATTAAATaGAATACCAGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERVSFIK*NTRWSR
Trigger: CCTGGACCACCTGGTATTCCATTTAATGAACGAAAC...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATGATGCCCTGAGCACCTaGTATTCCATCTTTTCCATT +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNDALST*YSIFSI
Trigger: AATGGAAAAGATGGAATACCAGGTGCTCAGGGCATC...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTTAAGAGAGCTCCAGTaGCAAGGAAATGTTACCAGG +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNLRELQ*QGNVTR
Trigger: CCTGGTAACATTTCCTTGCCACTGGAGCTCTCTTAA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATAGTAGTTGGCTATGCTaGGTGTTTGGGCTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYSSWLC*VFGLPD
Trigger: ATCAGGGAGCCCAAACACCCAGCATAGCCAACTACT...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGAATCATTTCAGTAGTTaGCTATGCTGGGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERNHFSS*LCWVFG
Trigger: CCCAAACACCCAGCATAGCCAACTACTGAAATGATT...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCATATCCAGTCCTGTaGTTTTCCTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWAYPVL*FSFVEL
Trigger: CAGCTCAACAAAGGAAAACCACAGGACTGGATATGC...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGATCTTGCTAGGCCACTaGAGCTTTAAGAGTACCAAA +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWILLGH*SFKSTK
Trigger: TTTGGTACTCTTAAAGCTTCAGTGGCCTAGCAAGAT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAGTTTTAGAGTGGGTGTaGACTCTTTGGTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILVLEWV*TLWSEH
Trigger: GTGCTCAGACCAAAGAGTTCACACCCACTCTAAAAC...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATGCAAAGGCAAGAGTCTaGTTTAGTTGTCCACTAAAC +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNAKARV*FSCPLN
Trigger: GTTTAGTGGACAACTAAATCAGACTCTTGCCTTTGC...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATCTTCTTCTCCTTTGTTaGTTTTCAGCCCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYLLLLC*FSALGH
Trigger: GTGTCCCAGGGCTGAAAAGCAACAAAGGAGAAGAAG...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAGGTCTGAGCACTAGTTaGATATCCAGTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILGLSTS*ISSPVV
Trigger: AACCACAGGACTGGATATGCAACTAGTGCTCAGACC...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAGGTTCAAATCACGGATaGATTGGAACAAACCCTGCC +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILGSNHG*IGTNPA
Trigger: GGCAGGGTTTGTTCCAATGCATCCGTGATTTGAACC...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATATAACTGTCCGTCCATaGAAATCCACAGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNITVRP*KSTVSF
Trigger: AAAGGACACTGTGGATTTCCATGGACGGACAGTTAT...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAGGAACCGTGAACACCTaGAAGTCCTCTTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQGTVNT*KSSFTL
Trigger: AAGGGTGAAAGAGGACTTCCAGGTGTTCACGGTTCC...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGGTGCACTTCCCAATTTaGAACAGGTTTTATCACTTT +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERVHFPI*NRFYHF
Trigger: AAAGTGATAAAACCTGTTTCAAATTGGGAAGTGCAC...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTACAAAACTGGAATTTaGTACTCCCTTTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: DKWRYITGSQQMRQTAERYKTGI*YSLFMQ
Trigger: CTGCATGAAAAGGGAGTATCAAATTCCAGTTTTGTA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATGTGAACTCTTTGGTCTaGGCACTAGTTGCATATCCA +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYVNSLV*ALVAYP
Trigger: TGGATATGCAACTAGTGCTCAGACCAAAGAGTTCAC...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTTCATGTGTACAGAGCTaGGGCAGGAAAAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFSCVQS*GRKKYL
Trigger: CAGATACTTTTTCCTGCCTCAGCTCTGTACACATGA...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATTGCTGGTTTAAAACCTaGCACAGAAACCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHCWFKT*HRNHRS
Trigger: GGAACGGTGGTTTCTGTGGCAGGTTTTAAACCAGCA...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAGTTCTAGAGAATCAGTaGCTGCCAATCAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILVLENQ*LPINSS
Trigger: GGAACTGTTGATTGGCAGGCACTGATTCTCTAGAAC...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGAAGGAATTGGGCAACTaGCGAATCTCAACTTCATTT +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWKELGN*RISTSF
Trigger: AAATGAAGTTGAGATTCGGCAGTTGCCCAATTCCTT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTACCACCGTTCCTTTTTaGCGTTTCTTCGTACTCGAA +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFTTVPF*RFFVLE
Trigger: TTCGAGTACGAAGAAACGCCAAAAAGGAACGGTGGT...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATGATACCATGTTCTCCTaGCAATCCAACATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHDTMFS*QSNISW
Trigger: CCAGGAGATGTTGGATTGCCAGGAGAACATGGTATC...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATAGGAAGCAGAAATATTaGCATCCAAAGCCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNRKQKY*HPKPKF
Trigger: AAACTTTGGCTTTGGATGTCAATATTTCTGCTTCCT...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTATGTTTCTTGAGCTATaGGGTTTGCACTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFMFLEL*GLHCSR
Trigger: TCTACTGCAGTGCAAACCTCATAGCTCAAGAAACAT...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATCTTTGCTGGCAGATATaGAGACATTTTACTGGCATG +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYLCWQI*RHFTGM
Trigger: CATGCCAGTAAAATGTCTTCATATCTGCCAGCAAAG...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATTCCCATCCTTTGTTTTaGTGGTGGCTTCTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYSHPLF*WWLLVL
Trigger: TAAGACAAGAAGCCACCATCAAAACAAAGGATGGGA...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGTCCTTTTCATCAGTCTaGCTCCTCGCAATTAAATTA +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWSFSSV*LLAIKL
Trigger: TAATTTAATTGCGAGGAGGCAGACTGATGAAAAGGA...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGAGAAGTAATGGTTACTaGCTTCAGTTGGAAAGAACA +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWRSNGY*LQLERT
Trigger: TGTTCTTTCCAACTGAAGGCAGTAACCATTACTTCT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAGGAATGCACTGGCACTaGTCTTTAAGTTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQGMHWH*SLSSCF
Trigger: AAAGCAGGAACTTAAAGACCAGTGCCAGTGCATTCC...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATAATGCCTTGTTTTCCTaGGATACCATGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHNALFS*DTMFSW
Trigger: CCAGGAGAACATGGTATCCCAGGAAAACAAGGCATT...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAATAGAGGCAATCTTCTaGGTTACATCTTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQIEAIF*VTSSTG
Trigger: CCCAGTGGAAGATGTAACCCAGAAGATTGCCTCTAT...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAATGTTCTCACATCTGTaGGACCCACCATCTAGATTT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILMFSHL*DPPSRF
Trigger: AAATCTAGATGGTGGGTCCCACAGATGTGAGAACAT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTCTTCCCACCCTACTTTaGGGCCCAAATTATTTAGTT +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFLPTLL*GPNYLV
Trigger: AACTAAATAATTTGGGCCCCAAAGTAGGGTGGGAAG...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTACATCTTGTGGACAAATaGAGGTATATCACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILHLVDK*RYITGS
Trigger: GGAACCTGTGATATACCTCCATTTGTCCACAAGATG...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTGTGTCTTCAGAAGGTaGATACAGACAAGTATGAAA +
Preference number: 4 (lower is better)
Translates to: MPSVLENQCLPINSSSMNCVFRR*IQTSMK
Trigger: TTTCATACTTGTCTGTATCCACCTTCTGAAGACACA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATCTTTGTGAGCAGAGATaGTACAAAAGGGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHLCEQR*YKRGMV
Trigger: TACCATCCCCCTTTTGTACCATCTCTGCTCACAAAG...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAAATAATAGAGTAGGGTaGGAAAGGCTTGTACCATGT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILNNRVG*ERLVPC
Trigger: ACATGGTACAAGCCTTTCTCACCCTACTCTATTATT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATCATGCCAGTGGTGATTaGTTTGAATTGAGCTCATTA +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYHASGD*FELSSL
Trigger: TAATGAGCTCAATTCAAAGCAATCACCACTGGCATG...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTCATTGGAACAAACCCTaGCTTAAATTAGGCACATTC +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFHWNKP*LKLGTF
Trigger: GAATGTGCCTAATTTAAGGCAGGGTTTGTTCCAATG...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAACAGATGAGACAGACTaGAGAAAGGCTAAATCTTAC +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILTDETD*RKAKSY
Trigger: GTAAGATTTAGCCTTTCTGCAGTCTGTCTCATCTGT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATGACAAATTTTTGCTGTaGTGGGTCTACTTGTCCGAA +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHDKFLL*WVYLSE
Trigger: TTCGGACAAGTAGACCCAGCACAGCAAAAATTTGTC...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATTTTTTCCAATGTCAGTaGGCTAGCCTTTCTAAACTC +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYFFQCQ*ASLSKL
Trigger: GAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAA...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTAAATCACGGATGCATTaGAACAAACCCTGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFKSRMH*NKPCLK
Trigger: TTTAAGGCAGGGTTTGTTCCAATGCATCCGTGATTT...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTATGGTGCAAGGGATTTaGCAACCATCAAGTCATTTA +
Preference number: 4 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFMVQGI*QPSSHL
Trigger: TAAATGACTTGATGGTTGCCAAATCCCTTGCACCAT...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGAGGGAAATAAACTTATaGGGTTACTTTGCTCACAAA +
Preference number: 4 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWREINL*GYFAHK
Trigger: TTTGTGAGCAAAGTAACCCCATAAGTTTATTTCCCT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAACCCAGAAGCTTAGTATaGTCACACAATACACACACT +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQPRSLV*SHNTHT
Trigger: AGTGTGTGTATTGTGTGACCATACTAAGCTTCTGGG...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTATTTCAGACAAATTTTTaGTGTGCTGGGTCTACTTGT +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILFQTNF*CAGSTC
Trigger: ACAAGTAGACCCAGCACAGCAAAAATTTGTCTGAAA...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATTATCCACCAAGAGTTTaGTGTATTCCTTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYYPPRV*CIPCIP
Trigger: TGGAATACAAGGAATACACCAAACTCTTGGTGGATA...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATATGAAGACATTTTACTaGCATGAGCAGTTACCCATG +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHMKTFY*HEQLPM
Trigger: CATGGGTAACTGCTCATGCCAGTAAAATGTCTTCAT...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATTCTTGCTGCAGCTTCTaGAGAAATACAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHSCCSF*RNTILL
Trigger: AAGGAGAATTGTATTTCTCCAGAAGCTGCAGCAAGA...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAATGGAATGGAATAAAATaGTGCAAGGGATTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQWNGIK*CKGFGN
Trigger: GTTGCCAAATCCCTTGCACCATTTTATTCCATTCCA...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATTTGAGCTATGAGGTTTaGACTGCAGTAGATTTTAAG +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHLSYEV*TAVDFK
Trigger: CTTAAAATCTACTGCAGTGCAAACCTCATAGCTCAA...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATAATGGAATAAAATGGTaGAAGGGATTTGGCAACCAT +
Preference number: 4 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHNGIKW*KGFGNH
Trigger: ATGGTTGCCAAATCCCTTGCACCATTTTATTCCATT...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTATGTTGTTTTCTGGAGTaGAAACAAGAGTTATTCATG +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILCCFLE*KQELFM
Trigger: CATGAATAACTCTTGTTTGCACTCCAGAAAACAACA...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATAATTCAATTATCTTCTaGATCTCCTCCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYNSIIF*ISSSSK
Trigger: CTTTGAAGAGGAGGAGATGCAGAAGATAATTGAATT...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTATTAAACACCATCTTGTaGACAAATGGAGGTATATCA +
Preference number: 4 (lower is better)
Translates to: HAFADTTHSSSRTSESILLNTIL*TNGGIS
Trigger: TGATATACCTCCATTTGTCCACAAGATGGTGTTTAA...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
3UTR CAA 72 bp AATCAAGGCCTCAAAGCATTATGCCCATGTGGGATTTaGAATAAAACTAATGCCATTGCACTTAACATGAGT +
Preference number: 4 (lower is better)
Translates to: NQGLKALCPCGI*NKTNAIALNMS
Trigger: ACTCATGTTAAGTGCAATGGCATTAGTTTTATTCAAAATCCCACATGGGCATAATGCTTTGAGGCCTTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR GCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAGTCTCTAATAAGAAGTaGACTTCCCAATTTGAAACA +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQVSNKK*TSQFET
Trigger: TGTTTCAAATTGGGAAGTGCACTTCTTATTAGAGAC...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CCA 90 bp TTTCTGACAATGGCACATTCACATGGAATCCAAGGTCATTACAATTTCAGAATCTATCCACCAAGAGTTTaGTGTATTCCTTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: FLTMAHSHGIQGHYNFRIYPPRV*CIPCIP
Trigger: TGGAATACAAGGAATACACCAAACTCTTGGTGGATA...GATTCTGAAATTGTAATGACCTTGGATTCCATGTGAATGTGCCATTGTCAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455415.1
CDS-3UTR CCA 90 bp TTTCTGACAATGGCACATTCACATGGAATCCAAGGTCATTACAATTTCAGAATCAATGGCACATTCACATaGAATCCAAGGTCATTACAA +
Preference number: 4 (lower is better)
Translates to: FLTMAHSHGIQGHYNFRINGTFT*NPRSLQ
Trigger: TTGTAATGACCTTGGATTCCATGTGAATGTGCCATT...GATTCTGAAATTGTAATGACCTTGGATTCCATGTGAATGTGCCATTGTCAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455415.1
CDS-3UTR CCA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAGATGAGTCTACAAAATaGATATCATCATCAGTCTAC +
Preference number: 4 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQDESTK*ISSSVY
Trigger: GTAGACTGATGATGATATCCATTTTGTAGACTCATC...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR TCA 90 bp TTTTCTGACAATGGCACATTCACATGGAATCCAAGGTCATTACAATTTCAGAATAGAATCAAACAGGAGTaGAACATCTTATTGAATGGG +
Preference number: 4 (lower is better)
Translates to: FSDNGTFTWNPRSLQFQNRIKQE*NILLNG
Trigger: CCCATTCAATAAGATGTTTCACTCCTGTTTGATTCT...ATTCTGAAATTGTAATGACCTTGGATTCCATGTGAATGTGCCATTGTCAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455415.1
CDS-3UTR CCA 90 bp AATCAAACAGGAGTGAAACATCTTATTGAATGGGGAAGTGAATCTGTCATCTTTAAACATCTTATTGAATaGGGAAGTGAATCTGTCATC +
Preference number: 4 (lower is better)
Translates to: NQTGVKHLIEWGSESVIFKHLIE*GSESVI
Trigger: GATGACAGATTCACTTCCCCATTCAATAAGATGTTT...AAAGATGACAGATTCACTTCCCCATTCAATAAGATGTTTCACTCCTGTTTGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455415.1
CDS CCA 90 bp GGTTCCGGGCCAACAAACTTCCTCGCGACCCTGCAGCGCCCTAGCTaGGCCGCCCGGCGCCGCCTCCTGGTTCTCGGCCGCTGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GSGPTNFLATLQRPS*AARRRLLVLGRCGC
Trigger: GCAGCCACAGCGGCCGAGAACCAGGAGGCGGCGCCGGGCGGCCCAGCTAGGGCGCTGCAGGGTCGCGAGGAAGTTTGTTGGCCCGGAACC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478620.2
CDS GCA 90 bp CCGACGGCGTGCTTGGTTCCGGGCCAACAAACTTCCTCGCGACCCTaGAGCGCCCTAGCTGGGCCGCCCGGCGCCGCCTCCTGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: PTACLVPGQQTSSRP*SALAGPPGAASWFS
Trigger: CGAGAACCAGGAGGCGGCGCCGGGCGGCCCAGCTAGGGCGCTGCAGGGTCGCGAGGAAGTTTGTTGGCCCGGAACCAAGCACGCCGTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478620.2
CDS GCA 90 bp CGGATGCGCCCGCCTGCTCTCGGGGAGCTAGCGTGCCCGACGGCGTaGTTGGTTCCGGGCCAACAAACTTCCTCGCGACCCTGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: RMRPPALGELACPTA*LVPGQQTSSRPCSA
Trigger: GGCGCTGCAGGGTCGCGAGGAAGTTTGTTGGCCCGGAACCAAGCACGCCGTCGGGCACGCTAGCTCCCCGAGAGCAGGCGGGCGCATCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS GCA 90 bp TGTGAACGGCCACGGATGCGCCCGCCTGCTCTCGGGGAGCTAGCGTaGCCGACGGCGTGCTTGGTTCCGGGCCAACAAACTTCCTCGCGA +
Preference number: 5 (lower is better)
Translates to: CERPRMRPPALGELA*PTACLVPGQQTSSR
Trigger: TCGCGAGGAAGTTTGTTGGCCCGGAACCAAGCACGCCGTCGGGCACGCTAGCTCCCCGAGAGCAGGCGGGCGCATCCGTGGCCGTTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS CCA 90 bp GCATCAGCCGGAATGCCAGGGATGCCTGGAGAGCCTGGAGGGCCTTaGTGGCCAGGGGATCCCATGGAGCCCTTGTTTCCTGGTGGACCC +
Preference number: 5 (lower is better)
Translates to: ASAGMPGMPGEPGGP*WPGDPMEPLFPGGP
Trigger: GGGTCCACCAGGAAACAAGGGCTCCATGGGATCCCCTGGCCACCAAGGCCCTCCAGGCTCTCCAGGCATCCCTGGCATTCCGGCTGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp CGGCCACGGATCTTGAATTCGTATTTGAGCCCCTCAGAGGCGCAGTaGAGTCCGGACAGGGCTGCGGCACCGCCGAGGAGTGAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RPRILNSYLSPSEAQ*SPDRAAAPPRSELP
Trigger: AGGGAGCTCACTCCTCGGCGGTGCCGCAGCCCTGTCCGGACTCCACTGCGCCTCTGAGGGGCTCAAATACGAATTCAAGATCCGTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp GGGTCCAGGGTCTCCTGGTGGCCCAGGCAACCCATCCTTCCCTGGTaGCCCAGGTCTCCCATAAGCTTGGGCAGCCAACATTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GSRVSWWPRQPILPW*PRSPISLGSQHCCW
Trigger: CCAGCAGCAATGTTGGCTGCCCAAGCTTATGGGAGACCTGGGCCACCAGGGAAGGATGGGTTGCCTGGGCCACCAGGAGACCCTGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp AGGGCCTTGGTGGCCAGGGGATCCCATGGAGCCCTTGTTTCCTGGTaGACCCATAGGACCGATGGCCCCCTTCATGCCTGTAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RALVARGSHGALVSW*THRTDGPLHACKAW
Trigger: CCAGGCCTTACAGGCATGAAGGGGGCCATCGGTCCTATGGGTCCACCAGGAAACAAGGGCTCCATGGGATCCCCTGGCCACCAAGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp TGGAGGGCCTTGGTGGCCAGGGGATCCCATGGAGCCCTTGTTTCCTaGTGGACCCATAGGACCGATGGCCCCCTTCATGCCTGTAAGGCC +
Preference number: 5 (lower is better)
Translates to: WRALVARGSHGALVS*WTHRTDGPLHACKA
Trigger: GGCCTTACAGGCATGAAGGGGGCCATCGGTCCTATGGGTCCACCAGGAAACAAGGGCTCCATGGGATCCCCTGGCCACCAAGGCCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp CCGCTCTCCTTTGCTTCCCTTTGGTCCCTCTCTTCCTGGGATTCCTaGAGGACCCCGTGGCCCTATATCACCCTTCCGGGCCATGGAATC +
Preference number: 5 (lower is better)
Translates to: PLSFASLWSLSSWDS*RTPWPYITLPGHGI
Trigger: GATTCCATGGCCCGGAAGGGTGATATAGGGCCACGGGGTCCTCCAGGAATCCCAGGAAGAGAGGGACCAAAGGGAAGCAAAGGAGAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp AGCTGGTCCTTGGGCGCCTGTTCTGCCAGGAATTCCTATCCCTTGTaGGCCTATGTCCCCTGGGGAACCGTGAACACCTGGAAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: SWSLGACSARNSYPL*AYVPWGTVNTWKSS
Trigger: AGAGGACTTCCAGGTGTTCACGGTTCCCCAGGGGACATAGGCCCACAAGGGATAGGAATTCCTGGCAGAACAGGCGCCCAAGGACCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 90 bp ATCCAAAGCCAAAGTTTCCAAGGGCCAGTGAGTCTCATTGTGCCTTaGAACCATGTGAACGGCCACGGATGCGCCCGCCTGCTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: IQSQSFQGPVSLIVP*NHVNGHGCARLLSG
Trigger: CCCCGAGAGCAGGCGGGCGCATCCGTGGCCGTTCACATGGTTTCAAGGCACAATGAGACTCACTGGCCCTTGGAAACTTTGGCTTTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS TCA 90 bp CCAGGAATTCCTATCCCTTGTGGGCCTATGTCCCCTGGGGAACCGTaGACACCTGGAAGTCCTCTTTCACCCTTTGGCCCACGTGGACCA +
Preference number: 5 (lower is better)
Translates to: PGIPIPCGPMSPGEP*TPGSPLSPFGPRGP
Trigger: TGGTCCACGTGGGCCAAAGGGTGAAAGAGGACTTCCAGGTGTTCACGGTTCCCCAGGGGACATAGGCCCACAAGGGATAGGAATTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp GTTCTCCTGGCAATCCAACATCTCCTGGCGGTCCTCTGGGTCCCATaGAGCCTGCAGATCCTTGCTGACCCTTTAGTCCTGGGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: VLLAIQHLLAVLWVP*SLQILADPLVLGFL
Trigger: TAGGAAGCCCAGGACTAAAGGGTCAGCAAGGATCTGCAGGCTCCATGGGACCCAGAGGACCGCCAGGAGATGTTGGATTGCCAGGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp GCCTGTTCTGCCAGGAATTCCTATCCCTTGTGGGCCTATGTCCCCTaGGGAACCGTGAACACCTGGAAGTCCTCTTTCACCCTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: ACSARNSYPLWAYVP*GTVNTWKSSFTLWP
Trigger: GGGCCAAAGGGTGAAAGAGGACTTCCAGGTGTTCACGGTTCCCCAGGGGACATAGGCCCACAAGGGATAGGAATTCCTGGCAGAACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGGGCCAGGATCGCCTTTaGGGCCAGGAGGACCGGGTG +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERGQDRL*GQEDRV
Trigger: CACCCGGTCCTCCTGGCCCAAAAGGCGATCCTGGCC...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGTGGACCTTGGGGGCCTaGTATCCCCAGGGAACCAGG +
Preference number: 5 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWWTLGA*YPQGTR
Trigger: CCTGGTTCCCTGGGGATACAAGGCCCCCAAGGTCCA...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGATCCTGGCAACCCCATaGCACCAGGCTCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWILATP*HQALPL
Trigger: CAGTGGGAGAGCCTGGTGCAATGGGGTTGCCAGGAT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 90 bp CAGGTCTCCCATAAGCTTGGGCAGCCAACATTGCTGCTGGCAGCTTaGGCTGGGATAGGAATACAGCCATCCTCTCTTCAAAAATCCTTA +
Preference number: 5 (lower is better)
Translates to: QVSHKLGQPTLLLAA*AGIGIQPSSLQKSL
Trigger: TAAGGATTTTTGAAGAGAGGATGGCTGTATTCCTATCCCAGCTCAAGCTGCCAGCAGCAATGTTGGCTGCCCAAGCTTATGGGAGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS GCA 90 bp TTACCAGGAACCAAGTCTTCTTCAGGTGTGTTCAATTCCCACCTGTaGGCTGATGGGCATGAGACACAGGATAGAGGCAATCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LPGTKSSSGVFNSHL*ADGHETQDRGNLLG
Trigger: ACCCAGAAGATTGCCTCTATCCTGTGTCTCATGCCCATCAGCGCACAGGTGGGAATTGAACACACCTGAAGAAGACTTGGTTCCTGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp ACAGGCTTGCCATCTGAAGCTCGCGTAGCAATAACTGTCCGTCCATaGAAATCCACAGTGTCCTTTTCATCAGTCTGCCTCCTCGCAATT +
Preference number: 5 (lower is better)
Translates to: TGLPSEARVAITVRP*KSTVSFSSVCLLAI
Trigger: AATTGCGAGGAGGCAGACTGATGAAAAGGACACTGTGGATTTCCATGGACGGACAGTTATTGCTACGCGAGCTTCAGATGGCAAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGACCTTGCTCTCCCTTTaGACCAGGGAATCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERTLLSL*TRESWS
Trigger: GCTCCAGGATTCCCTGGTCAAAAGGGAGAGCAAGGT...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGAGGAATTCCTATCCCTaGTGGGCCTATGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERRNSYP*WAYVPW
Trigger: CCAGGGGACATAGGCCCACAAGGGATAGGAATTCCT...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAACTCTCCAGCTGGTCCTaGGGCGCCTGTTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQLSSWS*GACSAR
Trigger: CCTGGCAGAACAGGCGCCCAAGGACCAGCTGGAGAG...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTCTGTCCTCTGTAGCCTaGGGGTCCAGGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFLSSVA*GSRVSW
Trigger: CCAGGAGACCCTGGACCCCAAGGCTACAGAGGACAG...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTGTCCTCTTTCACCCTTaGGCCCACGTGGACCAGGTG +
Preference number: 5 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFVLFHP*AHVDQV
Trigger: CACCTGGTCCACGTGGGCCAAAGGGTGAAAGAGGAC...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATGATCCCATGGAGCCCTaGTTTCCTGGTGGACCCATA +
Preference number: 5 (lower is better)
Translates to: MPSVLENQCLPINSSSMNDPMEP*FPGGPI
Trigger: TATGGGTCCACCAGGAAACAAGGGCTCCATGGGATC...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp TTAGGCACATTCCTCAGACACAACTCTGTTCACAGCTTTTTCCAATGTCAGTGGAGTACCAAAGACAGCTaGGTGGCTTCACCACCAAGC +
Preference number: 5 (lower is better)
Translates to: LGTFLRHNSVHSFFQCQWSTKDS*VASPPS
Trigger: GCTTGGTGGTGAAGCCACCAAGCTGTCTTTGGTACT...CCACTGACATTGGAAAAAGCTGTGAACAGAGTTGTGTCTGAGGAATGTGCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp CAACCCACAGATGATGAGGGTTTGACGGTATTAAGAGAGCTCCAGTaGCAAGGAAATGTTACCAGGAACCAAGTCTTCTTCAGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: QPTDDEGLTVLRELQ*QGNVTRNQVFFRCV
Trigger: AACACACCTGAAGAAGACTTGGTTCCTGGTAACATTTCCTTGCCACTGGAGCTCTCTTAATACCGTCAAACCCTCATCATCTGTGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATATCTTGAATTCGTATTaGAGCCCCTCAGAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: MPSVLENQCLPINSSSMNILNSY*SPSEAQ
Trigger: CTGCGCCTCTGAGGGGCTCAAATACGAATTCAAGAT...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGAATGCCTGGAATTCCTaGAAGACCCTCATCGCCTTT +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERNAWNS*KTLIAF
Trigger: AAAGGCGATGAGGGTCTTCAAGGAATTCCAGGCATT...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAAGGTCTCCCATAAGCTaGGGCAGCCAACATTGCTGC +
Preference number: 5 (lower is better)
Translates to: HAFADTTHSSSRTSESILRSPIS*GSQHCC
Trigger: GCAGCAATGTTGGCTGCCCAAGCTTATGGGAGACCT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTCCTGTGGTTTTCCTTaGTTGAGCTGTACCTCTTGC +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERSCGFP*LSCTSC
Trigger: GCAAGAGGTACAGCTCAACAAAGGAAAACCACAGGA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATGTGGCTGGCAGGCTCTaGCAGCATGTTCTCACATCT +
Preference number: 5 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYVAGRL*QHVLTS
Trigger: AGATGTGAGAACATGCTGCAAGAGCCTGCCAGCCAC...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 90 bp CCGTTCCTTTTTGGCGTTTCTTCGTACTCGAAACATGGCAGCTACTaGGTACTCCTCAGGAAGGCCTTTGGGAAATATCTTAATAGTGTC +
Preference number: 5 (lower is better)
Translates to: PFLFGVSSYSKHGSY*VLLRKAFGKYLNSV
Trigger: GACACTATTAAGATATTTCCCAAAGGCCTTCCTGAGGAGTACTCAGTAGCTGCCATGTTTCGAGTACGAAGAAACGCCAAAAAGGAACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 90 bp TATTCTGCTGGTTTAAAACCTGCCACAGAAACCACCGTTCCTTTTTaGCGTTTCTTCGTACTCGAAACATGGCAGCTACTGAGTACTCCT +
Preference number: 5 (lower is better)
Translates to: YSAGLKPATETTVPF*RFFVLETWQLLSTP
Trigger: AGGAGTACTCAGTAGCTGCCATGTTTCGAGTACGAAGAAACGCCAAAAAGGAACGGTGGTTTCTGTGGCAGGTTTTAAACCAGCAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTGAACGGCCACGGATCTaGAATTCGTATTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFERPRI*NSYLSP
Trigger: GGGGCTCAAATACGAATTCAAGATCCGTGGCCGTTC...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTCCAGGTTCTCCTTTTaGTCCTTTAGGGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: MPSVLENQCLPINSSSMNSRFSF*SFRANR
Trigger: TCTGTTGGCCCTAAAGGACAAAAAGGAGAACCTGGA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTACCTCCTTCTTCTCCTTaGTTGCTTTTCAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: HAFADTTHSSSRTSESILPPSSP*LLFSPG
Trigger: CCCAGGGCTGAAAAGCAACAAAGGAGAAGAAGGAGG...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTTGCCCTTTTCACCTTTaGCTCCTGTGGGACCAGGAT +
Preference number: 5 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFCPFHL*LLWDQD
Trigger: ATCCTGGTCCCACAGGAGCAAAAGGTGAAAAGGGCA...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTGGCTATGCTGGGTGTTaGGGCTCCCTGATAAAACAG +
Preference number: 5 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFGYAGC*GSLIKQ
Trigger: CTGTTTTATCAGGGAGCCCAAACACCCAGCATAGCC...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTGCGACAGTAAACACTaGTGTGTCTTCAGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: MPSVLENQCLPINSSSMNCDSKH*CVFRRW
Trigger: CCACCTTCTGAAGACACACAAGTGTTTACTGTCGCA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS GCA 90 bp AACAGCAGCTGCACTAACACCTCTGTTTTCTGTGCAGTGGAATTCTaGTATTTCGGTCTGGTAGGACACACTTGTTCAGCAATTCCTATA +
Preference number: 5 (lower is better)
Translates to: NSSCTNTSVFCAVEF*YFGLVGHTCSAIPI
Trigger: TATAGGAATTGCTGAACAAGTGTGTCCTACCAGACCGAAATAGCAGAATTCCACTGCACAGAAAACAGAGGTGTTAGTGCAGCTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483745.1
CDS-3UTR CAA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTAATCCTGCTTCTCCCTaGTTTGGAATGCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFNPASP*FGMHWH
Trigger: GTGCCAGTGCATTCCAAACAAGGGAGAAGCAGGATT...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTATCAATATCCACAGGCTaGCCATCTGAAGCTCGCGTA +
Preference number: 5 (lower is better)
Translates to: HAFADTTHSSSRTSESILSISTG*PSEARV
Trigger: TACGCGAGCTTCAGATGGCAAGCCTGTGGATATTGA...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATAGTCCAGTTTCACCCTaGTCTCCTTTCAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHSPVSP*SPFRPP
Trigger: TGGAGGCCTGAAAGGAGACAAGGGTGAAACTGGACT...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTTCTCCTTTAATGCCTaGTTTTCCTGGGATACCATG +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERFSFNA*FSWDTM
Trigger: CATGGTATCCCAGGAAAACAAGGCATTAAAGGAGAA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTACCTTCTTCTCCTTTGTaGCTTTTCAGCCCTGGGACA +
Preference number: 5 (lower is better)
Translates to: HAFADTTHSSSRTSESILPSSPL*LFSPGT
Trigger: TGTCCCAGGGCTGAAAAGCAACAAAGGAGAAGAAGG...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTGTTGAGCTGTACCTCTaGCTGCAGCTTCTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFVELYL*LQLLEK
Trigger: TTTCTCCAGAAGCTGCAGCAAGAGGTACAGCTCAAC...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGCCACATCACTCACTATaGGATCTGAACACGCAATTT +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERPHHSL*DLNTQF
Trigger: AAATTGCGTGTTCAGATCCAATAGTGAGTGATGTGG...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS GCA 90 bp CGGTCTGGTAGGACACACTTGTTCAGCAATTCCTATACAGTGAATTaGTTTTACATTGATTGTGAAAGAAGTTCACATGCCGGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: RSGRTHLFSNSYTVN*FYIDCERSSHAGSS
Trigger: GGAGCTACCGGCATGTGAACTTCTTTCACAATCAATGTAAAAGCAATTCACTGTATAGGAATTGCTGAACAAGTGTGTCCTACCAGACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483745.1
CDS GCA 90 bp TACAAAACAGCTAGTCACTGTACAACATCCACTTGGAACAGCAGCTaGACTAACACCTCTGTTTTCTGTGCAGTGGAATTCTGCTATTTC +
Preference number: 5 (lower is better)
Translates to: YKTASHCTTSTWNSS*TNTSVFCAVEFCYF
Trigger: GAAATAGCAGAATTCCACTGCACAGAAAACAGAGGTGTTAGTGCAGCTGCTGTTCCAAGTGGATGTTGTACAGTGACTAGCTGTTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483745.1
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGATATCCACCAAGAGTTaGGTGTATTCCTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERISTKS*VYSLYS
Trigger: GGAATACAAGGAATACACCAAACTCTTGGTGGATAT...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAGAGTCTCATTGTGCCTaGAAACCATGTGAACGGCCA +
Preference number: 5 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQESHCA*KPCERP
Trigger: TGGCCGTTCACATGGTTTCAAGGCACAATGAGACTC...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAACATGACTCTTCTGTCTaGTCCCTAACGGTCACGGAA +
Preference number: 5 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQHDSSV*SLTVTE
Trigger: TTCCGTGACCGTTAGGGACAAGACAGAAGAGTCATG...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATAACCACCGTTCCTTTTaGGCGTTTCTTCGTACTCGA +
Preference number: 5 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYNHRSF*AFLRTR
Trigger: TCGAGTACGAAGAAACGCCAAAAAGGAACGGTGGTT...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTTCACAACATGTTTCTaGAGCTATGAGGTTTGCACT +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERFTTCF*SYEVCT
Trigger: AGTGCAAACCTCATAGCTCAAGAAACATGTTGTGAA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAAGTTTGGTGTATTCCTaGTATTCCAGGAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: HAFADTTHSSSRTSESILSLVYS*YSRRSR
Trigger: CCTGGACCTCCTGGAATACAAGGAATACACCAAACT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp TGTAAAATAGCCAGCATCTTTACTTACACCCAGAAGCTTAGTATGGTCACACAAACACTGGCTTGGCAGTaGCCACAGAAATTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: CKIASIFTYTQKLSMVTQTLAWQ*PQKFLS
Trigger: GCTCAAGAATTTCTGTGGCAACTGCCAAGCCAGTGT...TTGTGTGACCATACTAAGCTTCTGGGTGTAAGTAAAGATGCTGGCTATTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATTGTGGTTTTCCTTTGTaGAGCTGTACCTCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYCGFPL*SCTSCC
Trigger: GCAGCAAGAGGTACAGCTCAACAAAGGAAAACCACA...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATCTTTCAGACAAATTTTaGCTGTGCTGGGTCTACTTG +
Preference number: 5 (lower is better)
Translates to: MPSVLENQCLPINSSSMNLSDKF*LCWVYL
Trigger: CAAGTAGACCCAGCACAGCAAAAATTTGTCTGAAAG...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp AAAACAGCTTTCTGTTTACCAAATGAGAGACTGAGTGAGGGGACCACAGAATATTTGCCACAGAAATTCTaGAGCAAAGCACCGATGTCT +
Preference number: 5 (lower is better)
Translates to: KTAFCLPNERLSEGTTEYLPQKF*SKAPMS
Trigger: AGACATCGGTGCTTTGCTCAAGAATTTCTGTGGCAA...ATATTCTGTGGTCCCCTCACTCAGTCTCTCATTTGGTAAACAGAAAGCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAACAGATGATGAGGGTTaGACGGTATTAAGAGAGCTC +
Preference number: 5 (lower is better)
Translates to: HAFADTTHSSSRTSESILTDDEG*TVLREL
Trigger: GAGCTCTCTTAATACCGTCAAACCCTCATCATCTGT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTATCTTGCTGCCCTTTGTaGCATATCATGTGTACAGAG +
Preference number: 5 (lower is better)
Translates to: HAFADTTHSSSRTSESILSCCPL*HIMCTE
Trigger: CTCTGTACACATGATATGCAACAAAGGGCAGCAAGA...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAACTTCCCACCCTACTTaGGGGCCCAAATTATTTAGT +
Preference number: 5 (lower is better)
Translates to: HAFADTTHSSSRTSESILTSHPT*GPKLFS
Trigger: ACTAAATAATTTGGGCCCCAAAGTAGGGTGGGAAGT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GACAAATGGAGGTATATCACAGGTTCCCAACAGATGAGACAGACTGCAGAAAGGTGCCCATGTGGGATTTaGAATAAAACTAATGCCATT +
Preference number: 5 (lower is better)
Translates to: DKWRYITGSQQMRQTAERCPCGI*NKTNAI
Trigger: AATGGCATTAGTTTTATTCAAAATCCCACATGGGCA...CCTTTCTGCAGTCTGTCTCATCTGTTGGGAACCTGTGATATACCTCCATTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 90 bp ATGGAATTCAAAAGAGAGGTGAGGGCTGTGAAGTACATTTGGGAGTaGCTGACATATAAATCCTATGTAAAACTGTGTCCGGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: MEFKREVRAVKYIWE*LTYKSYVKLCPELV
Trigger: AACCAACTCCGGACACAGTTTTACATAGGATTTATATGTCAGTCACTCCCAAATGTACTTCACAGCCCTCACCTCTCTTTTGAATTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476656.1
CDS GCA 90 bp TCAACTACTATAGAAATCTGTGGAATATTCTGCTGGTTTAAAACCTaGCACAGAAACCACCGTTCCTTTTTGGCGTTTCTTCGTACTCGA +
Preference number: 5 (lower is better)
Translates to: STTIEICGIFCWFKT*HRNHRSFLAFLRTR
Trigger: TCGAGTACGAAGAAACGCCAAAAAGGAACGGTGGTTTCTGTGGCAGGTTTTAAACCAGCAGAATATTCCACAGATTTCTATAGTAGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATAGTGCACTTCCCAATTaGAAACAGGTTTTATCACTT +
Preference number: 5 (lower is better)
Translates to: MPSVLENQCLPINSSSMNSALPN*KQVLSL
Trigger: AAGTGATAAAACCTGTTTCAAATTGGGAAGTGCACT...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATATCTCCCTCTGTGGCTaGAAACATAAATTCCACCAC +
Preference number: 5 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHISLCG*KHKFHH
Trigger: GTGGTGGAATTTATGTTTCAAGCCACAGAGGGAGAT...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp CATGCATTTGCTGACACTACACATTCATCTTCTAGGACAAGTGAGTCCATTCTAAATGGTGCAAGGGATTaGGCAACCATCAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: HAFADTTHSSSRTSESILNGARD*ATIKSF
Trigger: AAATGACTTGATGGTTGCCAAATCCCTTGCACCATT...TAGAATGGACTCACTTGTCCTAGAAGATGAATGTGTAGTGTCAGCAAATGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ATGCCCAGTGTTCTAGAGAATCAGTGCCTGCCAATCAACAGTTCCTCAATGAATTTCTTCTCCCCTGCTTaGAACATCATTAACATCTAT +
Preference number: 5 (lower is better)
Translates to: MPSVLENQCLPINSSSMNFFSPA*NIINIY
Trigger: ATAGATGTTAATGATGTTCAAAGCAGGGGAGAAGAA...ATTCATTGAGGAACTGTTGATTGGCAGGCACTGATTCTCTAGAACACTGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTCACTCATCTGTCCTATaGCCTGAGACTTTTAGTAGT +
Preference number: 5 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFHSSVL*PETFSS
Trigger: ACTACTAAAAGTCTCAGGCAATAGGACAGATGAGTG...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 90 bp TCAAAACCTGAAACTTCAAGTTTGTTTATGTTGTCATATGTCAGCTaGTGTCCCTCTATTCTCAGGATAGGGCATGACTCTTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: SKPETSSLFMLSYVS*CPSILRIGHDSSVL
Trigger: CAAGACAGAAGAGTCATGCCCTATCCTGAGAATAGAGGGACATCAGCTGACATATGACAACATAAACAAACTTGAAGTTTCAGGTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 90 bp TATTTCGGTCTGGTAGGACACACTTGTTCAGCAATTCCTATACAGTaGATTGCTTTTACATTGATTGTGAAAGAAGTTCACATGCCGGTA +
Preference number: 5 (lower is better)
Translates to: YFGLVGHTCSAIPIQ*IAFTLIVKEVHMPV
Trigger: TACCGGCATGTGAACTTCTTTCACAATCAATGTAAAAGCAATTCACTGTATAGGAATTGCTGAACAAGTGTGTCCTACCAGACCGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483745.1
CDS-3UTR CAA 90 bp GCTTGTACCATGTGGATACAGCCTTGTTTCTCTAGTTACGTCAAATTTAGTCATCAGGAAGCAGAAATATaGACATCCAAAGCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: ACTMWIQPCFSSYVKFSHQEAEI*TSKAKV
Trigger: AACTTTGGCTTTGGATGTCAATATTTCTGCTTCCTG...ATGACTAAATTTGACGTAACTAGAGAAACAAGGCTGTATCCACATGGTACAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp ACTCTGTTCACAGCTTTTTCCAATGTCAGTGGGCTAGCCTTTCTAAACTCATTTCTTCTTAACATGCATTaGCTGACACTACACATTCAT +
Preference number: 5 (lower is better)
Translates to: TLFTAFSNVSGLAFLNSFLLNMH*LTLHIH
Trigger: ATGAATGTGTAGTGTCAGCAAATGCATGTTAAGAAG...AAATGAGTTTAGAAAGGCTAGCCCACTGACATTGGAAAAAGCTGTGAACAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS-3UTR CAA 90 bp TCTGACAATGGCACATTCACATGGAATCCAAGGTCATTACAATTTCAGAATCAAATATCCACCAAGAGTTaGGTGTATTCCTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: SDNGTFTWNPRSLQFQNQISTKS*VYSLYS
Trigger: GGAATACAAGGAATACACCAAACTCTTGGTGGATAT...TTGATTCTGAAATTGTAATGACCTTGGATTCCATGTGAATGTGCCATTGTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455415.1
CDS CCA 72 bp CCAACAAACTTCCTCGCGACCCTGCAGCGCCCTAGCTaGGCCGCCCGGCGCCGCCTCCTGGTTCTCGGCCGC +
Preference number: 6 (lower is better)
Translates to: PTNFLATLQRPS*AARRRLLVLGR
Trigger: GCGGCCGAGAACCAGGAGGCGGCGCCGGGCGGCCCAGCTAGGGCGCTGCAGGGTCGCGAGGAAGTTTGTTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478620.2
CDS GCA 72 bp TGCTTGGTTCCGGGCCAACAAACTTCCTCGCGACCCTaGAGCGCCCTAGCTGGGCCGCCCGGCGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: CLVPGQQTSSRP*SALAGPPGAAS
Trigger: GGAGGCGGCGCCGGGCGGCCCAGCTAGGGCGCTGCAGGGTCGCGAGGAAGTTTGTTGGCCCGGAACCAAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478620.2
CDS CAA 90 bp ATGCGCCCGCCTGCTCTCGGGGAGCTAGCGTGCCCGACGGCGTGCTaGGTTCCGGGCCAACAAACTTCCTCGCGACCCTGCAGCGCCCTA +
Preference number: 6 (lower is better)
Translates to: MRPPALGELACPTAC*VPGQQTSSRPCSAL
Trigger: TAGGGCGCTGCAGGGTCGCGAGGAAGTTTGTTGGCCCGGAACCAAGCACGCCGTCGGGCACGCTAGCTCCCCGAGAGCAGGCGGGCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS GCA 72 bp CCGCCTGCTCTCGGGGAGCTAGCGTGCCCGACGGCGTaGTTGGTTCCGGGCCAACAAACTTCCTCGCGACCC +
Preference number: 6 (lower is better)
Translates to: PPALGELACPTA*LVPGQQTSSRP
Trigger: GGGTCGCGAGGAAGTTTGTTGGCCCGGAACCAAGCACGCCGTCGGGCACGCTAGCTCCCCGAGAGCAGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS GCA 72 bp CCACGGATGCGCCCGCCTGCTCTCGGGGAGCTAGCGTaGCCGACGGCGTGCTTGGTTCCGGGCCAACAAACT +
Preference number: 6 (lower is better)
Translates to: PRMRPPALGELA*PTACLVPGQQT
Trigger: AGTTTGTTGGCCCGGAACCAAGCACGCCGTCGGGCACGCTAGCTCCCCGAGAGCAGGCGGGCGCATCCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS CAA 72 bp CCTGCTCTCGGGGAGCTAGCGTGCCCGACGGCGTGCTaGGTTCCGGGCCAACAAACTTCCTCGCGACCCTGC +
Preference number: 6 (lower is better)
Translates to: PALGELACPTAC*VPGQQTSSRPC
Trigger: GCAGGGTCGCGAGGAAGTTTGTTGGCCCGGAACCAAGCACGCCGTCGGGCACGCTAGCTCCCCGAGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS CAA 72 bp GGAGGGCCTTGGTGGCCAGGGGATCCCATGGAGCCCTaGTTTCCTGGTGGACCCATAGGACCGATGGCCCCC +
Preference number: 6 (lower is better)
Translates to: GGPWWPGDPMEP*FPGGPIGPMAP
Trigger: GGGGGCCATCGGTCCTATGGGTCCACCAGGAAACAAGGGCTCCATGGGATCCCCTGGCCACCAAGGCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 90 bp GGAGAGCCTGGAGGGCCTTGGTGGCCAGGGGATCCCATGGAGCCCTaGTTTCCTGGTGGACCCATAGGACCGATGGCCCCCTTCATGCCT +
Preference number: 6 (lower is better)
Translates to: GEPGGPWWPGDPMEP*FPGGPIGPMAPFMP
Trigger: AGGCATGAAGGGGGCCATCGGTCCTATGGGTCCACCAGGAAACAAGGGCTCCATGGGATCCCCTGGCCACCAAGGCCCTCCAGGCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 72 bp GGGGGTCCTTGGAGAAACTCCAACCAGCCTGCCCAGTaGGGTTGGAGGGCAGCCTTCCCTGACCACTCTGTG +
Preference number: 6 (lower is better)
Translates to: GGPWRNSNQPAQ*GWRAAFPDHSV
Trigger: CACAGAGTGGTCAGGGAAGGCTGCCCTCCAACCTCACTGGGCAGGCTGGTTGGAGTTTCTCCAAGGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476656.1
CDS CCA 72 bp GTGGCCAGGGGATCCCATGGAGCCCTTGTTTCCTGGTaGACCCATAGGACCGATGGCCCCCTTCATGCCTGT +
Preference number: 6 (lower is better)
Translates to: VARGSHGALVSW*THRTDGPLHAC
Trigger: ACAGGCATGAAGGGGGCCATCGGTCCTATGGGTCCACCAGGAAACAAGGGCTCCATGGGATCCCCTGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp TTGGTGGCCAGGGGATCCCATGGAGCCCTTGTTTCCTaGTGGACCCATAGGACCGATGGCCCCCTTCATGCC +
Preference number: 6 (lower is better)
Translates to: LVARGSHGALVS*WTHRTDGPLHA
Trigger: GGCATGAAGGGGGCCATCGGTCCTATGGGTCCACCAGGAAACAAGGGCTCCATGGGATCCCCTGGCCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp GTCTCCTGGTGGCCCAGGCAACCCATCCTTCCCTGGTaGCCCAGGTCTCCCATAAGCTTGGGCAGCCAACAT +
Preference number: 6 (lower is better)
Translates to: VSWWPRQPILPW*PRSPISLGSQH
Trigger: ATGTTGGCTGCCCAAGCTTATGGGAGACCTGGGCCACCAGGGAAGGATGGGTTGCCTGGGCCACCAGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp ATCTTGAATTCGTATTTGAGCCCCTCAGAGGCGCAGTaGAGTCCGGACAGGGCTGCGGCACCGCCGAGGAGT +
Preference number: 6 (lower is better)
Translates to: ILNSYLSPSEAQ*SPDRAAAPPRS
Trigger: ACTCCTCGGCGGTGCCGCAGCCCTGTCCGGACTCCACTGCGCCTCTGAGGGGCTCAAATACGAATTCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 90 bp TCCAGCTGGTCCTTGGGCGCCTGTTCTGCCAGGAATTCCTATCCCTaGTGGGCCTATGTCCCCTGGGGAACCGTGAACACCTGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: SSWSLGACSARNSYP*WAYVPWGTVNTWKS
Trigger: GGACTTCCAGGTGTTCACGGTTCCCCAGGGGACATAGGCCCACAAGGGATAGGAATTCCTGGCAGAACAGGCGCCCAAGGACCAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp TTGTGGGCCTATGTCCCCTGGGGAACCGTGAACACCTaGAAGTCCTCTTTCACCCTTTGGCCCACGTGGACC +
Preference number: 6 (lower is better)
Translates to: LWAYVPWGTVNT*KSSFTLWPTWT
Trigger: GGTCCACGTGGGCCAAAGGGTGAAAGAGGACTTCCAGGTGTTCACGGTTCCCCAGGGGACATAGGCCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp TTTGCTTCCCTTTGGTCCCTCTCTTCCTGGGATTCCTaGAGGACCCCGTGGCCCTATATCACCCTTCCGGGC +
Preference number: 6 (lower is better)
Translates to: FASLWSLSSWDS*RTPWPYITLPG
Trigger: GCCCGGAAGGGTGATATAGGGCCACGGGGTCCTCCAGGAATCCCAGGAAGAGAGGGACCAAAGGGAAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 72 bp TCCTTGGGCGCCTGTTCTGCCAGGAATTCCTATCCCTaGTGGGCCTATGTCCCCTGGGGAACCGTGAACACC +
Preference number: 6 (lower is better)
Translates to: SLGACSARNSYP*WAYVPWGTVNT
Trigger: GGTGTTCACGGTTCCCCAGGGGACATAGGCCCACAAGGGATAGGAATTCCTGGCAGAACAGGCGCCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 90 bp CATCCAAAGCCAAAGTTTCCAAGGGCCAGTGAGTCTCATTGTGCCTaGAAACCATGTGAACGGCCACGGATGCGCCCGCCTGCTCTCGGG +
Preference number: 6 (lower is better)
Translates to: HPKPKFPRASESHCA*KPCERPRMRPPALG
Trigger: CCCGAGAGCAGGCGGGCGCATCCGTGGCCGTTCACATGGTTTCAAGGCACAATGAGACTCACTGGCCCTTGGAAACTTTGGCTTTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS TCA 72 bp CCTATCCCTTGTGGGCCTATGTCCCCTGGGGAACCGTaGACACCTGGAAGTCCTCTTTCACCCTTTGGCCCA +
Preference number: 6 (lower is better)
Translates to: PIPCGPMSPGEP*TPGSPLSPFGP
Trigger: TGGGCCAAAGGGTGAAAGAGGACTTCCAGGTGTTCACGGTTCCCCAGGGGACATAGGCCCACAAGGGATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp GCAATCCAACATCTCCTGGCGGTCCTCTGGGTCCCATaGAGCCTGCAGATCCTTGCTGACCCTTTAGTCCTG +
Preference number: 6 (lower is better)
Translates to: AIQHLLAVLWVP*SLQILADPLVL
Trigger: CAGGACTAAAGGGTCAGCAAGGATCTGCAGGCTCCATGGGACCCAGAGGACCGCCAGGAGATGTTGGATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 72 bp CAAAGTTTCCAAGGGCCAGTGAGTCTCATTGTGCCTTaGAACCATGTGAACGGCCACGGATGCGCCCGCCTG +
Preference number: 6 (lower is better)
Translates to: QSFQGPVSLIVP*NHVNGHGCARL
Trigger: CAGGCGGGCGCATCCGTGGCCGTTCACATGGTTTCAAGGCACAATGAGACTCACTGGCCCTTGGAAACTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS CCA 72 bp GCCAGGAATTCCTATCCCTTGTGGGCCTATGTCCCCTaGGGAACCGTGAACACCTGGAAGTCCTCTTTCACC +
Preference number: 6 (lower is better)
Translates to: ARNSYPLWAYVP*GTVNTWKSSFT
Trigger: GGTGAAAGAGGACTTCCAGGTGTTCACGGTTCCCCAGGGGACATAGGCCCACAAGGGATAGGAATTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp GTTTCGTTCATTAAATGGAATACCAGGTGGTCCAGGTaGTCCGGGTTTCCCAGGGGGTCCGTCGCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: VSFIKWNTRWSR*SGFPRGSVAAL
Trigger: AAGGGCAGCGACGGACCCCCTGGGAAACCCGGACCACCTGGACCACCTGGTATTCCATTTAATGAACGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 72 bp CCAAAGTTTCCAAGGGCCAGTGAGTCTCATTGTGCCTaGAAACCATGTGAACGGCCACGGATGCGCCCGCCT +
Preference number: 6 (lower is better)
Translates to: PKFPRASESHCA*KPCERPRMRPP
Trigger: AGGCGGGCGCATCCGTGGCCGTTCACATGGTTTCAAGGCACAATGAGACTCACTGGCCCTTGGAAACTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476656.1
ENST00000478620.2
CDS CAA 72 bp TTACACCTGGAAATCCTTCTAATCCTGGCAACCCCATaGCACCAGGCTCTCCCACTGGGCCAGGATCGCCTT +
Preference number: 6 (lower is better)
Translates to: LHLEILLILATP*HQALPLGQDRL
Trigger: AAGGCGATCCTGGCCCAGTGGGAGAGCCTGGTGCAATGGGGTTGCCAGGATTAGAAGGATTTCCAGGTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS GCA 72 bp AAACCATTTTCACCCGGCTCTCCTTTATGCCCTTTCTaGCCAGGTGAACCCGGAGCTCCTGGTAATCCTGCT +
Preference number: 6 (lower is better)
Translates to: KPFSPGSPLCPF*PGEPGAPGNPA
Trigger: AGCAGGATTACCAGGAGCTCCGGGTTCACCTGGGCAGAAAGGGCATAAAGGAGAGCCGGGTGAAAATGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483745.1
ENST00000620364.5
CDS CAA 72 bp CCAGGGTTTCTTCCTTCTGGTGGGTTTGTGGTCTCGTaGACTTCAAGAATGAAGCCGTGGACCTTCGCGGCA +
Preference number: 6 (lower is better)
Translates to: PGFLPSGGFVVS*TSRMKPWTFAA
Trigger: TGCCGCGAAGGTCCACGGCTTCATTCTTGAAGTCAACGAGACCACAAACCCACCAGAAGGAAGAAACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476656.1
CDS CAA 90 bp CCGATGTGTCCAGGGTTTCTTCCTTCTGGTGGGTTTGTGGTCTCGTaGACTTCAAGAATGAAGCCGTGGACCTTCGCGGCAAGTGTTACA +
Preference number: 6 (lower is better)
Translates to: PMCPGFLPSGGFVVS*TSRMKPWTFAASVT
Trigger: TGTAACACTTGCCGCGAAGGTCCACGGCTTCATTCTTGAAGTCAACGAGACCACAAACCCACCAGAAGGAAGAAACCCTGGACACATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476656.1
CDS CAA 90 bp ACCTCCTTCTTCTCCTTTGTTGCTTTTCAGCCCTGGGACACTGGCTaGGCAGTTGCCACAGAAATTCTTGAGCAAAGCACCGATGTCTCC +
Preference number: 6 (lower is better)
Translates to: TSFFSFVAFQPWDTG*AVATEILEQSTDVS
Trigger: GGAGACATCGGTGCTTTGCTCAAGAATTTCTGTGGCAACTGCCAAGCCAGTGTCCCAGGGCTGAAAAGCAACAAAGGAGAAGAAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 72 bp CATAAGCTTGGGCAGCCAACATTGCTGCTGGCAGCTTaGGCTGGGATAGGAATACAGCCATCCTCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: HKLGQPTLLLAA*AGIGIQPSSLQ
Trigger: TTGAAGAGAGGATGGCTGTATTCCTATCCCAGCTCAAGCTGCCAGCAGCAATGTTGGCTGCCCAAGCTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp GCTTGGGCAGCCAACATTGCTGCTGGCAGCTTGAGCTaGGATAGGAATACAGCCATCCTCTCTTCAAAAATC +
Preference number: 6 (lower is better)
Translates to: AWAANIAAGSLS*DRNTAILSSKI
Trigger: GATTTTTGAAGAGAGGATGGCTGTATTCCTATCCCAGCTCAAGCTGCCAGCAGCAATGTTGGCTGCCCAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 72 bp AAACTGTGTCCGGAGTTGGTTCCTTCCAGTGGGTTCTaGGTCTCGCTGACTTCAAGAATGAAGCTGCAGACC +
Preference number: 6 (lower is better)
Translates to: KLCPELVPSSGF*VSLTSRMKLQT
Trigger: GGTCTGCAGCTTCATTCTTGAAGTCAGCGAGACCAAGAACCCACTGGAAGGAACCAACTCCGGACACAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476656.1
CDS CCA 72 bp GTTCCTTCCGATGTGTCCAGGGTTTCTTCCTTCTGGTaGGTTTGTGGTCTCGTTGACTTCAAGAATGAAGCC +
Preference number: 6 (lower is better)
Translates to: VPSDVSRVSSFW*VCGLVDFKNEA
Trigger: GGCTTCATTCTTGAAGTCAACGAGACCACAAACCCACCAGAAGGAAGAAACCCTGGACACATCGGAAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476656.1
CDS CCA 72 bp CCATCTGAAGCTCGCGTAGCAATAACTGTCCGTCCATaGAAATCCACAGTGTCCTTTTCATCAGTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: PSEARVAITVRP*KSTVSFSSVCL
Trigger: GAGGCAGACTGATGAAAAGGACACTGTGGATTTCCATGGACGGACAGTTATTGCTACGCGAGCTTCAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp CCTGGTAATCCTGCTTCTCCCTTGTTTGGAATGCACTaGCACTGGTCTTTAAGTTCCTGCTTTGCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: PGNPASPLFGMH*HWSLSSCFAGR
Trigger: TCTGCCAGCAAAGCAGGAACTTAAAGACCAGTGCCAGTGCATTCCAAACAAGGGAGAAGCAGGATTACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 72 bp CCAAAGTTTCCAAGGGCCAGTGAGTCTCATTGTGCCTaGAAACCATGTGAACGGCCACGGATCTTGAATTCG +
Preference number: 6 (lower is better)
Translates to: PKFPRASESHCA*KPCERPRILNS
Trigger: CGAATTCAAGATCCGTGGCCGTTCACATGGTTTCAAGGCACAATGAGACTCACTGGCCCTTGGAAACTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 72 bp TTGTTGCTTTTCAGCCCTGGGACACTGGCTTGGCAGTaGCCACAGAAATTCTTGAGCAAAGCACCGATGTCT +
Preference number: 6 (lower is better)
Translates to: LLLFSPGTLAWQ*PQKFLSKAPMS
Trigger: AGACATCGGTGCTTTGCTCAAGAATTTCTGTGGCAACTGCCAAGCCAGTGTCCCAGGGCTGAAAAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 90 bp CATCCAAAGCCAAAGTTTCCAAGGGCCAGTGAGTCTCATTGTGCCTaGAAACCATGTGAACGGCCACGGATCTTGAATTCGTATTTGAGC +
Preference number: 6 (lower is better)
Translates to: HPKPKFPRASESHCA*KPCERPRILNSYLS
Trigger: GCTCAAATACGAATTCAAGATCCGTGGCCGTTCACATGGTTTCAAGGCACAATGAGACTCACTGGCCCTTGGAAACTTTGGCTTTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 72 bp AAGTTGGTGAAGTTCAATATCCACAGGCTTGCCATCTaGAGCTCGCGTAGCAATAACTGTCCGTCCATGGAA +
Preference number: 6 (lower is better)
Translates to: KLVKFNIHRLAI*SSRSNNCPSME
Trigger: TTCCATGGACGGACAGTTATTGCTACGCGAGCTTCAGATGGCAAGCCTGTGGATATTGAACTTCACCAACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp CTATGTAAAACTGTGTCCGGAGTTGGTTCCTTCCAGTaGGTTCTTGGTCTCGCTGACTTCAAGAATGAAGCT +
Preference number: 6 (lower is better)
Translates to: LCKTVSGVGSFQ*VLGLADFKNEA
Trigger: AGCTTCATTCTTGAAGTCAGCGAGACCAAGAACCCACTGGAAGGAACCAACTCCGGACACAGTTTTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476656.1
CDS CCA 72 bp GGTTTAAAACCTGCCACAGAAACCACCGTTCCTTTTTaGCGTTTCTTCGTACTCGAAACATGGCAGCTACTG +
Preference number: 6 (lower is better)
Translates to: GLKPATETTVPF*RFFVLETWQLL
Trigger: CAGTAGCTGCCATGTTTCGAGTACGAAGAAACGCCAAAAAGGAACGGTGGTTTCTGTGGCAGGTTTTAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CAA 90 bp ATATTCTGCTGGTTTAAAACCTGCCACAGAAACCACCGTTCCTTTTaGGCGTTTCTTCGTACTCGAAACATGGCAGCTACTGAGTACTCC +
Preference number: 6 (lower is better)
Translates to: IFCWFKTCHRNHRSF*AFLRTRNMAATEYS
Trigger: GGAGTACTCAGTAGCTGCCATGTTTCGAGTACGAAGAAACGCCAAAAAGGAACGGTGGTTTCTGTGGCAGGTTTTAAACCAGCAGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 72 bp TTTGGCGTTTCTTCGTACTCGAAACATGGCAGCTACTaGGTACTCCTCAGGAAGGCCTTTGGGAAATATCTT +
Preference number: 6 (lower is better)
Translates to: FGVSSYSKHGSY*VLLRKAFGKYL
Trigger: AAGATATTTCCCAAAGGCCTTCCTGAGGAGTACTCAGTAGCTGCCATGTTTCGAGTACGAAGAAACGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS GCA 72 bp TGCACTAACACCTCTGTTTTCTGTGCAGTGGAATTCTaGTATTTCGGTCTGGTAGGACACACTTGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: CTNTSVFCAVEF*YFGLVGHTCSA
Trigger: TGCTGAACAAGTGTGTCCTACCAGACCGAAATAGCAGAATTCCACTGCACAGAAAACAGAGGTGTTAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483745.1
CDS CAA 72 bp CTGACATATAAATCCTATGTAAAACTGTGTCCGGAGTaGGTTCCTTCCAGTGGGTTCTTGGTCTCGCTGACT +
Preference number: 6 (lower is better)
Translates to: LTYKSYVKLCPE*VPSSGFLVSLT
Trigger: AGTCAGCGAGACCAAGAACCCACTGGAAGGAACCAACTCCGGACACAGTTTTACATAGGATTTATATGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476656.1
CDS TCA 72 bp ACCTGGGATTGTATACTAATGCCAAGTTTGTGCCACTaGCGATCAAACAAAGGACGGAGTTCTCGATTTCTA +
Preference number: 6 (lower is better)
Translates to: TWDCILMPSLCH*RSNKGRSSRFL
Trigger: TAGAAATCGAGAACTCCGTCCTTTGTTTGATCGTCAGTGGCACAAACTTGGCATTAGTATACAATCCCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp ACTTACAAAACAGCTAGTCACTGTACAACATCCACTTaGAACAGCAGCTGCACTAACACCTCTGTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: TYKTASHCTTST*NSSCTNTSVFC
Trigger: ACAGAAAACAGAGGTGTTAGTGCAGCTGCTGTTCCAAGTGGATGTTGTACAGTGACTAGCTGTTTTGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483745.1
CDS CAA 72 bp TCCCTTGTTATCCTTGTTATAATATCCACCAAGAGTTaGGTGTATTCCTTGTATTCCAGGAGGTCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: SLVILVIISTKS*VYSLYSRRSRW
Trigger: CCACCTGGACCTCCTGGAATACAAGGAATACACCAAACTCTTGGTGGATATTATAACAAGGATAACAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS TCA 72 bp AAAAGAGAGGTGAGGGCTGTGAAGTACATTTGGGAGTaGCTGACATATAAATCCTATGTAAAACTGTGTCCG +
Preference number: 6 (lower is better)
Translates to: KREVRAVKYIWE*LTYKSYVKLCP
Trigger: CGGACACAGTTTTACATAGGATTTATATGTCAGTCACTCCCAAATGTACTTCACAGCCCTCACCTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476656.1
CDS TCA 72 bp TGCTTTGCTGGCAGATATGAAGACATTTTACTGGCATaGGCAGTTACCCATGATGATGCAATATTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: CFAGRYEDILLA*AVTHDDAIFPK
Trigger: CTTTGGAAATATTGCATCATCATGGGTAACTGCTCATGCCAGTAAAATGTCTTCATATCTGCCAGCAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5
CDS CCA 72 bp CCATCAACTACTATAGAAATCTGTGGAATATTCTGCTaGTTTAAAACCTGCCACAGAAACCACCGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: PSTTIEICGIFC*FKTCHRNHRSF
Trigger: AAAGGAACGGTGGTTTCTGTGGCAGGTTTTAAACCAGCAGAATATTCCACAGATTTCTATAGTAGTTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620364.5