RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL18A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000182871

Ensembl transcript IDs: ENST00000342220.9, ENST00000355480.10, ENST00000359759.8, ENST00000423214.1, ENST00000459895.1, ENST00000473212.1, ENST00000651438.1

Found 1066 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACCTGAGCCTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTaGAGGAGCCCAGATGGCCTTGTGCTGAGTGTGGCCTCAGCTCCC +
Preference number: 1 (lower is better)
Translates to: GPEPPSHLPQGEHTP*RSPDGLVLSVASAP
Trigger: GGGAGCTGAGGCCACACTCAGCACAAGGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAGGCTCAGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 90 bp CGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCTTGTGCTaGGTGTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTA +
Preference number: 1 (lower is better)
Translates to: RRASTHPGGAQMALC*VWPQLPLPHGACLL
Trigger: TAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCACACTCAGCACAAGGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 90 bp CCCCACCGGTTTCGTCGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTaGTGTGGTCAGCCTGGCGCTGCCCTGAGTCCACTTGTCCCTCCA +
Preference number: 1 (lower is better)
Translates to: PHRFRRSPEAGACWL*CGQPGAALSPLVPP
Trigger: TGGAGGGACAAGTGGACTCAGGGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCGACGAAACCGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 90 bp CCAGCCCCAGGCTGCTGTGCTTGGTGTTGGAGGACAGGCCGGAGCTaGGGGTCACAGTGCGCCTCTGAGCTTGGGAACCTGCTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: PAPGCCAWCWRTGRS*GSQCASELGNLLQP
Trigger: AGGCTGAAGCAGGTTCCCAAGCTCAGAGGCGCACTGTGACCCCCAGCTCCGGCCTGTCCTCCAACACCAAGCACAGCAGCCTGGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 90 bp CTCTTTGATGTGGCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTaGTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCC +
Preference number: 1 (lower is better)
Translates to: LFDVAVFHPGAQLDK*WLSHVPARGMRWGP
Trigger: GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGCCACATCAAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 90 bp TTTGATGTGGCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTaGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: FDVAVFHPGAQLDKC*LSHVPARGMRWGPW
Trigger: CCAGGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGCCACATCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 90 bp AACCAGCCCCACCGGTTTCGTCGCAGTCCTGAGGCAGGTGCGTGTTaGCTGTGCTGTGGTCAGCCTGGCGCTGCCCTGAGTCCACTTGTC +
Preference number: 1 (lower is better)
Translates to: NQPHRFRRSPEAGAC*LCCGQPGAALSPLV
Trigger: GACAAGTGGACTCAGGGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCGACGAAACCGGTGGGGCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 90 bp GGGGCCCTGGATGGGAGGCTGCCAGACCCCAACTCATGGGTCCCTTaGATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCTGTCTGCTTT +
Preference number: 1 (lower is better)
Translates to: GALDGRLPDPNSWVP*ISQLGLGQGGAVCF
Trigger: AAAGCAGACAGCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGTCTGGCAGCCTCCCATCCAGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 90 bp TGCTGTGCTTGGTGTTGGAGGACAGGCCGGAGCTGGGGGTCACAGTaGGCCTCTGAGCTTGGGAACCTGCTTCAGCCTGGGGTTGCTGTG +
Preference number: 1 (lower is better)
Translates to: CCAWCWRTGRSWGSQ*ASELGNLLQPGVAV
Trigger: CACAGCAACCCCAGGCTGAAGCAGGTTCCCAAGCTCAGAGGCGCACTGTGACCCCCAGCTCCGGCCTGTCCTCCAACACCAAGCACAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 90 bp TGTTGCCGGATCTCAGGGGTGGCTGTGACTGACAGAGGACCTTGTTaGACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGC +
Preference number: 1 (lower is better)
Translates to: CCRISGVAVTDRGPC*TSWLLCSPAGRPVG
Trigger: GCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAACAAGGTCCTCTGTCAGTCACAGCCACCCCTGAGATCCGGCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 90 bp GGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTaGCTGACCCAGCTGGGCTCACAGGTCAGGGGAGAGTTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: GLIRPRGCTGHDTAP*LTQLGSQVRGELGQ
Trigger: CTGCCCCAACTCTCCCCTGACCTGTGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 90 bp GAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATaGTACTGCACCCTGCCTGACCCAGCTGGGCTCACAGGTCAGGGG +
Preference number: 1 (lower is better)
Translates to: EIEPWSDQAKRLHRA*YCTLPDPAGLTGQG
Trigger: CCCCTGACCTGTGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 90 bp TCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCGCAGTCCTaGGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGC +
Preference number: 1 (lower is better)
Translates to: SHTITEPAPPVSSQS*GRCVLAVLWSAWRC
Trigger: GCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCGACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 90 bp GAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTaGACAGGGCATGATACTGCACCCTGCCTGACCCAGCTGGGCTCA +
Preference number: 1 (lower is better)
Translates to: EILEKSSRGLIRPRG*TGHDTAPCLTQLGS
Trigger: TGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 90 bp CAGGGTGGAGCTGTCTGCTTTGGATGTATCATCTCATGGCTCATTTaGGAGGCCAGCCCCAGGCTGCTGTGCTTGGTGTTGGAGGACAGG +
Preference number: 1 (lower is better)
Translates to: QGGAVCFGCIISWLI*EASPRLLCLVLEDR
Trigger: CCTGTCCTCCAACACCAAGCACAGCAGCCTGGGGCTGGCCTCCCAAATGAGCCATGAGATGATACATCCAAAGCAGACAGCTCCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 90 bp ACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTaGTCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCC +
Preference number: 1 (lower is better)
Translates to: TASQSRKSWRNRAVV*SGQEVAQGMILHPA
Trigger: GGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 90 bp TTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCTGTCTGCTTTaGATGTATCATCTCATGGCTCATTTGGGAGGCCAGCCCCAGGCT +
Preference number: 1 (lower is better)
Translates to: LNLPAWTRPGWSCLL*MYHLMAHLGGQPQA
Trigger: AGCCTGGGGCTGGCCTCCCAAATGAGCCATGAGATGATACATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 90 bp CAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTaGAGCTGTCTGCTTTGGATGTATCATCTCATGGCTCATTTGGGA +
Preference number: 1 (lower is better)
Translates to: QLMGPLNLPAWTRPG*SCLLWMYHLMAHLG
Trigger: TCCCAAATGAGCCATGAGATGATACATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGTGGCCGGCCGCTCCCTaGCCACGGTGGGGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRWPAAP*PRWGLP
Trigger: AGGAAGCCCCCACCGTGGGCAGGGAGCGGCCGGCCA...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGCTCCCTGCCCACGGTaGGGGCTTCCTCCGAGCCGC +
Preference number: 2 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRAPCPR*GLPPSR
Trigger: GCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGATGGCAGCCAGGTCCTaGGGCCAGGGGCTGGCCGGC +
Preference number: 2 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRMAARS*GQGLAG
Trigger: GCCGGCCAGCCCCTGGCCCCAGGACCTGGCTGCCAT...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCTAGCCCCAGGGACCTaGGCCTCCCTCCCATCTACC +
Preference number: 2 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRLAPGT*ASLPST
Trigger: GGTAGATGGGAGGGAGGCTCAGGTCCCTGGGGCTAG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCAGGACAGGCCGGAGCTaGGGGTCACAGTGCGCCTCT +
Preference number: 2 (lower is better)
Translates to: RSPEAGACWLCCGQPGAARTGRS*GSQCAS
Trigger: AGAGGCGCACTGTGACCCCCAGCTCCGGCCTGTCCT...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCAGATGGCCTTGTGCTaGGTGTGGCCTCAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRQMALC*VWPQLP
Trigger: TGGGAGCTGAGGCCACACTCAGCACAAGGCCATCTG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGTGGCCGGCCGCTCCCTaGCCACGGTGGGGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: TPTHGSLESPSLDSARVEWPAAP*PRWGLP
Trigger: AGGAAGCCCCCACCGTGGGCAGGGAGCGGCCGGCCA...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCAGGCCAGCCCCAGGCTaGTGTGCTTGGTGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: RSPEAGACWLCCGQPGAARPAPG*CAWCWR
Trigger: CCTCCAACACCAAGCACAGCAGCCTGGGGCTGGCCT...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGCTCCCTGCCCACGGTaGGGGCTTCCTCCGAGCCGC +
Preference number: 2 (lower is better)
Translates to: TPTHGSLESPSLDSARVEAPCPR*GLPPSR
Trigger: GCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGGCGAGCACACACCCTaGAGGAGCCCAGATGGCCTT +
Preference number: 2 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAGEHTP*RSPDGL
Trigger: AAGGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGTGCTGTGCTTGGTGTTaGAGGACAGGCCGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRCCAWC*RTGRSW
Trigger: CCAGCTCCGGCCTGTCCTCCAACACCAAGCACAGCA...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCCCAGGCTGCTGTGCTTaGTGTTGGAGGACAGGCCGG +
Preference number: 2 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAPGCCA*CWRTGR
Trigger: CCGGCCTGTCCTCCAACACCAAGCACAGCAGCCTGG...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATaGGGGCCCTGGATGGGAGGC +
Preference number: 2 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPARGMR*GPWMGG
Trigger: GCCTCCCATCCAGGGCCCCCATCTCATGCCCCTGGC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCCTGCTAGGTGGGAGATaGAGTCAGCACCTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPLLGGR*SQHLLG
Trigger: CCCCAGCAGGTGCTGACTTCATCTCCCACCTAGCAG...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCTAGGAGACAGCCAATaGCTGCCCTGCATCTGGAGC +
Preference number: 2 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRLGDSQ*LPCIWS
Trigger: GCTCCAGATGCAGGGCAGTCATTGGCTGTCTCCTAG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGTGGCCGGCCGCTCCCTaGCCACGGTGGGGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLWPAAP*PRWGLP
Trigger: AGGAAGCCCCCACCGTGGGCAGGGAGCGGCCGGCCA...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCAGCTGGGGGTCACAGTaGGCCTCTGAGCTTGGGAAC +
Preference number: 2 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPSWGSQ*ASELGN
Trigger: GTTCCCAAGCTCAGAGGCGCACTGTGACCCCCAGCT...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCAGCCCCAGGCTGCTGTaGTTGGTGTTGGAGGACAGG +
Preference number: 2 (lower is better)
Translates to: RSPEAGACWLCCGQPGAASPRLL*LVLEDR
Trigger: CCTGTCCTCCAACACCAAGCACAGCAGCCTGGGGCT...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGCTCAGCTGGACAAGTaGTGGCTGAGCCACGTCCCA +
Preference number: 2 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAAQLDK*WLSHVP
Trigger: TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CAA 90 bp GGGGGCCCTGGATGGGAGGCTGCCAGACCCCAACTCATGGGTCCCTaGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCTGTCTGCTT +
Preference number: 2 (lower is better)
Translates to: GGPGWEAARPQLMGP*NLPAWTRPGWSCLL
Trigger: AAGCAGACAGCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGTCTGGCAGCCTCCCATCCAGGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCCAGCCTCAGCCTCTTTaGTGTGGCCGTGTTCCATCC +
Preference number: 2 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAQPQPL*CGRVPS
Trigger: GGATGGAACACGGCCACATCAAAGAGGCTGAGGCTG...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCGCTTCAGCCTGGGGTTaGTGTGGAGAATGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPASAWG*CGEWPR
Trigger: TCTGGGCCATTCTCCACAGCAACCCCAGGCTGAAGC...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGCTCCCTGCCCACGGTaGGGGCTTCCTCCGAGCCGC +
Preference number: 2 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLAPCPR*GLPPSR
Trigger: GCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAATGGCAGCCAGGTCCTaGGGCCAGGGGCTGGCCGGC +
Preference number: 2 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRMAARS*GQGLAG
Trigger: GCCGGCCAGCCCCTGGCCCCAGGACCTGGCTGCCAT...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCTTGAATCTCCCAGCTTaGACTCGGCCAGGGTGGAGC +
Preference number: 2 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPLNLPA*TRPGWS
Trigger: GCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAA...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAATGAGATGGGGGCCCTaGATGGGAGGCTGCCAGACC +
Preference number: 2 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPMRWGP*MGGCQT
Trigger: GGTCTGGCAGCCTCCCATCCAGGGCCCCCATCTCAT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGCCAGGGGCATGAGATaGGGGCCCTGGATGGGAGGC +
Preference number: 2 (lower is better)
Translates to: LPCVLATACPVPASASLMARGMR*GPWMGG
Trigger: GCCTCCCATCCAGGGCCCCCATCTCATGCCCCTGGC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGCCAGGGGCATGAGATaGGGGCCCTGGATGGGAGGC +
Preference number: 2 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFARGMR*GPWMGG
Trigger: GCCTCCCATCCAGGGCCCCCATCTCATGCCCCTGGC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCAATCGAGCCGTGGTCTaGTCAGGCCAAGAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: RSPEAGACWLCCGQPGAANRAVV*SGQEVA
Trigger: TGCAACCTCTTGGCCTGATCAGACCACGGCTCGATT...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCTGGACAAGTGCTGGCTaGGCCACGTCCCAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFWTSAG*ATSQPG
Trigger: CCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCA...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGATGGGGGCCCTGGATaGGAGGCTGCCAGACCCCAA +
Preference number: 2 (lower is better)
Translates to: LPCVLATACPVPASASLMDGGPG*EAARPQ
Trigger: TTGGGGTCTGGCAGCCTCCCATCCAGGGCCCCCATC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGAGAATGGCCCAGAGCTaGGCAGAAGGGGCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: TPTHGSLESPSLDSARVERMAQS*AEGAPP
Trigger: AGGGGGAGCCCCTTCTGCTCAGCTCTGGGCCATTCT...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCAAAGCAGGAAATCCTaGAGAAATCGAGCCGTGGTC +
Preference number: 2 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRQSRKS*RNRAVV
Trigger: GACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGGCGAGCACACACCCTaGAGGAGCCCAGATGGCCTT +
Preference number: 2 (lower is better)
Translates to: LPCVLATACPVPASASLMGEHTP*RSPDGL
Trigger: AAGGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGGCGAGCACACACCCTaGAGGAGCCCAGATGGCCTT +
Preference number: 2 (lower is better)
Translates to: TPTHGSLESPSLDSARVEGEHTP*RSPDGL
Trigger: AAGGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCAGGACAGGCCGGAGCTaGGGGTCACAGTGCGCCTCT +
Preference number: 2 (lower is better)
Translates to: ATACPVPASASLMWPCSIRTGRS*GSQCAS
Trigger: AGAGGCGCACTGTGACCCCCAGCTCCGGCCTGTCCT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCATGGACTCGGCCAGGGTaGAGCTGTCTGCTTTGGATG +
Preference number: 2 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPWTRPG*SCLLWM
Trigger: CATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCA...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTCTGCTAGGTGGGAGATaGAGTCAGCACCTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: VASAPIASRGLSANRSGFLLGGR*SQHLLG
Trigger: CCCCAGCAGGTGCTGACTTCATCTCCCACCTAGCAG...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGCAGATGGCCTTGTGCTaGGTGTGGCCTCAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: LPCVLATACPVPASASLMQMALC*VWPQLP
Trigger: TGGGAGCTGAGGCCACACTCAGCACAAGGCCATCTG...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGATGAAGTCAGCACCTaGTGGGGCGAGCACGGCTTC +
Preference number: 2 (lower is better)
Translates to: TPTHGSLESPSLDSARVEDEVST*WGEHGF
Trigger: GAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTCATC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCAGGCCAGCCCCAGGCTaGTGTGCTTGGTGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: ATACPVPASASLMWPCSIRPAPG*CAWCWR
Trigger: CCTCCAACACCAAGCACAGCAGCCTGGGGCTGGCCT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGGTTGCTGTGGAGAATaGCCCAGAGCTGAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPGCCGE*PRAEQK
Trigger: CTTCTGCTCAGCTCTGGGCCATTCTCCACAGCAACC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGAGGTTGCACAGGGCATaGTACTGCACCCTGCCTGAC +
Preference number: 2 (lower is better)
Translates to: LPCVLATACPVPASASLMRLHRA*YCTLPD
Trigger: GTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGTCACAGTGCGCCTCTaGGCTTGGGAACCTGCTTCA +
Preference number: 2 (lower is better)
Translates to: TPTHGSLESPSLDSARVEVTVRL*AWEPAS
Trigger: TGAAGCAGGTTCCCAAGCTCAGAGGCGCACTGTGAC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGCATGATACTGCACCCTaGCTGACCCAGCTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: LPCVLATACPVPASASLMHDTAP*LTQLGS
Trigger: TGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATG...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCTGAGCTTGGGAACCTaGTTCAGCCTGGGGTTGCTG +
Preference number: 2 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFLSLGT*FSLGLL
Trigger: CAGCAACCCCAGGCTGAAGCAGGTTCCCAAGCTCAG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGGAAGTCAGCACCTGCTaGGGCGAGCACGGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVEVSTC*GEHGFP
Trigger: TGGGAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTC...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAGAAGTCAGCACCTGCTaGGGCGAGCACGGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LPLPHGACLLTGLGFVHREVSTC*GEHGFP
Trigger: TGGGAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTC...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCATCTCATGGCTCATTTaGGAGGCCAGCCCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFISWLI*EASPRL
Trigger: CAGCCTGGGGCTGGCCTCCCAAATGAGCCATGAGAT...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCTTGAATCTCCCAGCTTaGACTCGGCCAGGGTGGAGC +
Preference number: 2 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFLNLPA*TRPGWS
Trigger: GCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAA...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGAATCGAGCCGTGGTCTaGTCAGGCCAAGAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: LPCVLATACPVPASASLMNRAVV*SGQEVA
Trigger: TGCAACCTCTTGGCCTGATCAGACCACGGCTCGATT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGTCACAGTGCGCCTCTaGGCTTGGGAACCTGCTTCA +
Preference number: 2 (lower is better)
Translates to: ATACPVPASASLMWPCSIVTVRL*AWEPAS
Trigger: TGAAGCAGGTTCCCAAGCTCAGAGGCGCACTGTGAC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGGATGAAGTCAGCACCTaGTGGGGCGAGCACGGCTTC +
Preference number: 2 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVDEVST*WGEHGF
Trigger: GAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTCATC...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTCTATACAGGAAAGTATaGCAGCCAGGTCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: VASAPIASRGLSANRSGFLYRKV*QPGPGA
Trigger: GGCCCCAGGACCTGGCTGCCATACTTTCCTGTATAG...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CAA 90 bp CTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCTGTCTGCTTaGGATGTATCATCTCATGGCTCATTTGGGAGGCCAGCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: LESPSLDSARVELSA*DVSSHGSFGRPAPG
Trigger: GCCTGGGGCTGGCCTCCCAAATGAGCCATGAGATGATACATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCACAGGGTGGAGCTGTCTaGTTTGGATGTATCATCTCA +
Preference number: 2 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPQGGAV*FGCIIS
Trigger: TGAGATGATACATCCAAAGCAGACAGCTCCACCCTG...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCTATACAGGAAAGTATaGCAGCCAGGTCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: ATACPVPASASLMWPCSILYRKV*QPGPGA
Trigger: GGCCCCAGGACCTGGCTGCCATACTTTCCTGTATAG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGTTCTTGAGGATTACATaGAACGTGAACTATACAGGA +
Preference number: 2 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRFLRIT*NVNYTG
Trigger: TCCTGTATAGTTCACGTTTCATGTAATCCTCAAGAA...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGGTTGCACAGGGCATaGTACTGCACCCTGCCTGAC +
Preference number: 2 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPRLHRA*YCTLPD
Trigger: GTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCT...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGAATCGAGCCGTGGTCTaGTCAGGCCAAGAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVNRAVV*SGQEVA
Trigger: TGCAACCTCTTGGCCTGATCAGACCACGGCTCGATT...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAAATCGAGCCGTGGTCTaGTCAGGCCAAGAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRNRAVV*SGQEVA
Trigger: TGCAACCTCTTGGCCTGATCAGACCACGGCTCGATT...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTATCAGGCCAAGAGGTTaGACAGGGCATGATACTGCA +
Preference number: 2 (lower is better)
Translates to: VASAPIASRGLSANRSGFIRPRG*TGHDTA
Trigger: TGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGAT...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGATCAGGCCAAGAGGTTaGACAGGGCATGATACTGCA +
Preference number: 2 (lower is better)
Translates to: LPCVLATACPVPASASLMIRPRG*TGHDTA
Trigger: TGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGAT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGGGAGAAATCGAGCCGTaGTCTGATCAGGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVGEIEP*SDQAKR
Trigger: CCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCC...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCAAAGCAGGAAATCCTaGAGAAATCGAGCCGTGGTC +
Preference number: 2 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFQSRKS*RNRAVV
Trigger: GACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGGATGTATCATCTCATaGCTCATTTGGGAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFGCIIS*LIWEAS
Trigger: GCTGGCCTCCCAAATGAGCCATGAGATGATACATCC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACATGATACTGCACCCTaGCTGACCCAGCTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTHDTAP*LTQLGS
Trigger: TGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGAGAGTTGGGGCAGGTaGATGTCAGCATCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTESWGR*MSASGF
Trigger: GAAGCCTGATGCTGACATTCACCTGCCCCAACTCTC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAATCAGGCCAAGAGGTTaGACAGGGCATGATACTGCA +
Preference number: 2 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLIRPRG*TGHDTA
Trigger: TGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGAT...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAGGCCAGCCCCAGGCTaGTGTGCTTGGTGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRRPAPG*CAWCWR
Trigger: CCTCCAACACCAAGCACAGCAGCCTGGGGCTGGCCT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCCCTGGATGGGAGGCTaGCAGACCCCAACTCATGGG +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRPWMGG*QTPTHG
Trigger: CCCATGAGTTGGGGTCTGGCAGCCTCCCATCCAGGG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACTATACAGGAAAGTATaGCAGCCAGGTCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTLYRKV*QPGPGA
Trigger: GGCCCCAGGACCTGGCTGCCATACTTTCCTGTATAG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTACAAAGCAGGAAATCCTaGAGAAATCGAGCCGTGGTC +
Preference number: 2 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLQSRKS*RNRAVV
Trigger: GACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTG...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAGCTGGGGGTCACAGTaGGCCTCTGAGCTTGGGAAC +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRSWGSQ*ASELGN
Trigger: GTTCCCAAGCTCAGAGGCGCACTGTGACCCCCAGCT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAGCCCCAGGCTGCTGTaGTTGGTGTTGGAGGACAGG +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRSPRLL*LVLEDR
Trigger: CCTGTCCTCCAACACCAAGCACAGCAGCCTGGGGCT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGCTCAGCTGGACAAGTaGTGGCTGAGCCACGTCCCA +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRAQLDK*WLSHVP
Trigger: TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTTGCTGTGCTTGGTGTTaGAGGACAGGCCGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRCCAWC*RTGRSW
Trigger: CCAGCTCCGGCCTGTCCTCCAACACCAAGCACAGCA...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCTGAGCTTGGGAACCTaGTTCAGCCTGGGGTTGCTG +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRLSLGT*FSLGLL
Trigger: CAGCAACCCCAGGCTGAAGCAGGTTCCCAAGCTCAG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGTTCTTGAGGATTACATaGAACGTGAACTATACAGGA +
Preference number: 2 (lower is better)
Translates to: TPTHGSLESPSLDSARVEFLRIT*NVNYTG
Trigger: TCCTGTATAGTTCACGTTTCATGTAATCCTCAAGAA...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTACGAATGACTCGGGTTaGTGTTGCCGGATCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRTNDSG*CCRISG
Trigger: CCCTGAGATCCGGCAACATCAACCCGAGTCATTCGT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGTTCTTGAGGATTACATaGAACGTGAACTATACAGGA +
Preference number: 2 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLFLRIT*NVNYTG
Trigger: TCCTGTATAGTTCACGTTTCATGTAATCCTCAAGAA...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAACTCATGGGTCCCTTaGATCTCCCAGCTTGGACTC +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRNSWVP*ISQLGL
Trigger: GAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGAAGTCAGCACCTGCTaGGGCGAGCACGGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: QCKRSLLFACLNWLHITHEVSTC*GEHGFP
Trigger: TGGGAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCAGCTGGACAAGTGCTaGCTGAGCCACGTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: QCKRSLLFACLNWLHITHQLDKC*LSHVPA
Trigger: GGCTGGGACGTGGCTCAGCCAGCACTTGTCCAGCTG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGTGCTGTGGTCAGCCTaGCGCTGCCCTGAGTCCACT +
Preference number: 2 (lower is better)
Translates to: QCKRSLLFACLNWLHITHVLWSA*RCPEST
Trigger: AGTGGACTCAGGGCAGCGCCAGGCTGACCACAGCAC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGTTTCGTCGCAGTCCTaGGGCAGGTGCGTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: QCKRSLLFACLNWLHITHVSSQS*GRCVLA
Trigger: AGCCAACACGCACCTGCCTCAGGACTGCGACGAAAC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCAAAGCAGGAAATCCTaGAGAAATCGAGCCGTGGTC +
Preference number: 2 (lower is better)
Translates to: SELASHHTQLQNQPHRFRQSRKS*RNRAVV
Trigger: GACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR GCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGAGACAGCCAATGACTaGCCTGCATCTGGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: QCKRSLLFACLNWLHITHETAND*PASGAS
Trigger: GCTGGCTCCAGATGCAGGGCAGTCATTGGCTGTCTC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGAGAGTTGGGGCAGGTaGATGTCAGCATCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: QCKRSLLFACLNWLHITHESWGR*MSASGF
Trigger: GAAGCCTGATGCTGACATTCACCTGCCCCAACTCTC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR TCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACTCTCAGGGGTGGCTGTaGCTGACAGAGGACCTTGTT +
Preference number: 2 (lower is better)
Translates to: QCKRSLLFACLNWLHITHSQGWL*LTEDLV
Trigger: AACAAGGTCCTCTGTCAGTCACAGCCACCCCTGAGA...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGTGGCCTCAGCTCCCATaGCCTCACGGGGCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRWPQLP*PHGACL
Trigger: CAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCA...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCATCTCATGGCTCATTaGGGAGGCCAGCCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRHLMAH*GGQPQA
Trigger: AGCCTGGGGCTGGCCTCCCAAATGAGCCATGAGATG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 72 bp AGCACACACCCTGGAGGAGCCCAGATGGCCTTGTGCTaGGTGTGGCCTCAGCTCCCATTGCCTCACGGGGCC +
Preference number: 3 (lower is better)
Translates to: STHPGGAQMALC*VWPQLPLPHGA
Trigger: GGCCCCGTGAGGCAATGGGAGCTGAGGCCACACTCAGCACAAGGCCATCTGGGCTCCTCCAGGGTGTGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 72 bp GTGGCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTaGTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGA +
Preference number: 3 (lower is better)
Translates to: VAVFHPGAQLDK*WLSHVPARGMR
Trigger: TCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 72 bp GGCTGCTGTGCTTGGTGTTGGAGGACAGGCCGGAGCTaGGGGTCACAGTGCGCCTCTGAGCTTGGGAACCTG +
Preference number: 3 (lower is better)
Translates to: GCCAWCWRTGRS*GSQCASELGNL
Trigger: CAGGTTCCCAAGCTCAGAGGCGCACTGTGACCCCCAGCTCCGGCCTGTCCTCCAACACCAAGCACAGCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 72 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTaGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGG +
Preference number: 3 (lower is better)
Translates to: AVFHPGAQLDKC*LSHVPARGMRW
Trigger: CCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCAACTCATGGGTCCCTaGAATCTCCCAGCTTGGACT +
Preference number: 3 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRQLMGP*NLPAWT
Trigger: AGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCTGGCCTCAGCTCCCATaGCCTCACGGGGCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: ATACPVPASASLMWPCSIWPQLP*PHGACL
Trigger: CAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCA...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGTGGAGCTGTCTGCTTaGGATGTATCATCTCATGGC +
Preference number: 3 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRVELSA*DVSSHG
Trigger: GCCATGAGATGATACATCCAAAGCAGACAGCTCCAC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 72 bp GATGGGAGGCTGCCAGACCCCAACTCATGGGTCCCTTaGATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCT +
Preference number: 3 (lower is better)
Translates to: DGRLPDPNSWVP*ISQLGLGQGGA
Trigger: AGCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGTCTGGCAGCCTCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 72 bp AGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTaGCTGACCCAGCTGGGCTCACAGGTCAGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: RPRGCTGHDTAP*LTQLGSQVRGE
Trigger: CTCTCCCCTGACCTGTGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 72 bp TTTCGTCGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTaGTGTGGTCAGCCTGGCGCTGCCCTGAGTCCACTT +
Preference number: 3 (lower is better)
Translates to: FRRSPEAGACWL*CGQPGAALSPL
Trigger: AAGTGGACTCAGGGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCGACGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGTGCTTCAGCCTGGGGTaGCTGTGGAGAATGGCCCAG +
Preference number: 3 (lower is better)
Translates to: TPTHGSLESPSLDSARVECFSLG*LWRMAQ
Trigger: CTGGGCCATTCTCCACAGCAACCCCAGGCTGAAGCA...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 72 bp CCGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATaGTACTGCACCCTGCCTGACCCAGCTGGGCTCACA +
Preference number: 3 (lower is better)
Translates to: PWSDQAKRLHRA*YCTLPDPAGLT
Trigger: TGTGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 72 bp GGTTTTGTGCACAGAACGGTGCTGCTAGGTGGGAGATaGAGTCAGCACCTGCTGGGGCGAGCACGGCTTCCC +
Preference number: 3 (lower is better)
Translates to: GFVHRTVLLGGR*SQHLLGRARLP
Trigger: GGGAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTCATCTCCCACCTAGCAGCACCGTTCTGTGCACAAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 72 bp ATTACAGAACCAGCCCCACCGGTTTCGTCGCAGTCCTaGGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCC +
Preference number: 3 (lower is better)
Translates to: ITEPAPPVSSQS*GRCVLAVLWSA
Trigger: GGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCGACGAAACCGGTGGGGCTGGTTCTGTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR GCA 72 bp ATCTCAGGGGTGGCTGTGACTGACAGAGGACCTTGTTaGACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGG +
Preference number: 3 (lower is better)
Translates to: ISGVAVTDRGPC*TSWLLCSPAGR
Trigger: CCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAACAAGGTCCTCTGTCAGTCACAGCCACCCCTGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCATCTCATGGCTCATTaGGGAGGCCAGCCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: ATACPVPASASLMWPCSIHLMAH*GGQPQA
Trigger: AGCCTGGGGCTGGCCTCCCAAATGAGCCATGAGATG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCTTGAATCTCCCAGCTaGGACTCGGCCAGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: ATACPVPASASLMWPCSILESPS*DSARVE
Trigger: CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 72 bp GCTGCCCTGAGTCCACTTGTCCCTCCACAGAACGAATaGCTCGGGTTGATGTTGCCGGATCTCAGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: AALSPLVPPQNE*LGLMLPDLRGG
Trigger: GCCACCCCTGAGATCCGGCAACATCAACCCGAGTCATTCGTTCTGTGGAGGGACAAGTGGACTCAGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 72 bp ACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTaGCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGT +
Preference number: 3 (lower is better)
Translates to: TACPVPASASLM*PCSILALSWTS
Trigger: ACTTGTCCAGCTGAGCGCCAGGATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGTGGAGCTGTCTGCTTaGGATGTATCATCTCATGGC +
Preference number: 3 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPVELSA*DVSSHG
Trigger: GCCATGAGATGATACATCCAAAGCAGACAGCTCCAC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 72 bp GGGTTGATGTTGCCGGATCTCAGGGGTGGCTGTGACTaGCAGAGGACCTTGTTGCACCTCGTGGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: GLMLPDLRGGCD*QRTLLHLVAAL
Trigger: CAAAGCAGCCACGAGGTGCAACAAGGTCCTCTGTCAGTCACAGCCACCCCTGAGATCCGGCAACATCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 72 bp GTCCACTTGTCCCTCCACAGAACGAATGACTCGGGTTaGTGTTGCCGGATCTCAGGGGTGGCTGTGACTGAC +
Preference number: 3 (lower is better)
Translates to: VHLSLHRTNDSG*CCRISGVAVTD
Trigger: GTCAGTCACAGCCACCCCTGAGATCCGGCAACATCAACCCGAGTCATTCGTTCTGTGGAGGGACAAGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGTGGAGCTGTCTGCTTaGGATGTATCATCTCATGGC +
Preference number: 3 (lower is better)
Translates to: ATACPVPASASLMWPCSIVELSA*DVSSHG
Trigger: GCCATGAGATGATACATCCAAAGCAGACAGCTCCAC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CCA 72 bp GGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTaGAGCTGTCTGCTTTGGATGTATCATCTCATGGCT +
Preference number: 3 (lower is better)
Translates to: GPLNLPAWTRPG*SCLLWMYHLMA
Trigger: AGCCATGAGATGATACATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR TCA 72 bp CAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTaGTCAGGCCAAGAGGTTGCACAGGGCATGATACTG +
Preference number: 3 (lower is better)
Translates to: QSRKSWRNRAVV*SGQEVAQGMIL
Trigger: CAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCTTGAATCTCCCAGCTaGGACTCGGCCAGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: QCKRSLLFACLNWLHITHLESPS*DSARVE
Trigger: CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR-3UTR CAA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCAACTCATGGGTCCCTaGAATCTCCCAGCTTGGACT +
Preference number: 3 (lower is better)
Translates to: QCKRSLLFACLNWLHITHQLMGP*NLPAWT
Trigger: AGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGCCCCGCATGCCGCCTaGCAGGGGGCTGTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGAPHAA*QGAVER
Trigger: GCGCTCAACAGCCCCCTGTCAGGCGGCATGCGGGGC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGGACGATGGGCACGGCTaGGCGGTCGGCACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRDDGHG*AVGTAH
Trigger: GTGCGCCGTGCCGACCGCGCAGCCGTGCCCATCGTC...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGTGGCCGGCCGCTCCCTaGCCACGGTGGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRWPAAP*PRWGLP
Trigger: AGGAAGCCCCCACCGTGGGCAGGGAGCGGCCGGCCA...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCATGGCAGCCAGGTCCTaGGGCCAGGGGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGMAARS*GQGLAG
Trigger: GCCGGCCAGCCCCTGGCCCCAGGACCTGGCTGCCAT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGCCTGCCCGGCCAGGTaGGCCCGGAACACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGACPAR*ARNTWL
Trigger: GAGCCAGGTGTTCCGGGCCCACCTGGCCGGGCAGGC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGGCCTGCCCGGCCAGGTaGGCCCGGAACACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRACPAR*ARNTWL
Trigger: GAGCCAGGTGTTCCGGGCCCACCTGGCCGGGCAGGC...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCTCGCTGATGCGCTCTaGCTCCGCGGAGGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGLADAL*LRGGRA
Trigger: CGCGCGGCCTCCGCGGAGCCAGAGCGCATCAGCGAG...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651438.1
CDS-3UTR GCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGTCCCCGAGCCCGCTaGCAGAGTCTCCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRRPRAR*QSLRMP
Trigger: GGGCATCCGGAGACTCTGGCAGCGGGCTCGGGGACG...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCCGGGGAAGCCTTGTaGCCCGGTGTCGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRPGEAL*PGVARL
Trigger: AAGCCGGGCGACACCGGGCCACAAGGCTTCCCCGGG...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCCAGGGAGGCCCGGCTaGCCGACTCCGTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRPGRPG*PTPSFP
Trigger: AGGGAAGGACGGAGTCGGGCAGCCGGGCCTCCCTGG...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGGACGATGGGCACGGCTaGGCGGTCGGCACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPDDGHG*AVGTAH
Trigger: GTGCGCCGTGCCGACCGCGCAGCCGTGCCCATCGTC...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGTGGGGCCAGGTGGGGTaGCTCAGGACGTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRWGQVG*LRTSLP
Trigger: CGGCAAGGACGTCCTGAGGCACCCCACCTGGCCCCA...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCTCAGGGCGTTGGAGCTaGTGGCTGGGAGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGSGRWS*WLGAAA
Trigger: CGCAGCCGCTCCCAGCCAGCAGCTCCAACGCCCTGA...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCGTCCCCGAGCCCGCTaGCAGAGTCTCCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRRPRAR*QSLRMP
Trigger: GGGCATCCGGAGACTCTGGCAGCGGGCTCGGGGACG...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGGGCACCTCGGCGCCATaGTCTCCCCAGGACCGTCAG +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRGTSAP*SPQDRQ
Trigger: CTGACGGTCCTGGGGAGAGCATGGCGCCGAGGTGCC...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651438.1
CDS-3UTR CCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCCCCGGCCGTCCGTATaGACCCGGGGGTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRPRPSV*TRGSSE
Trigger: TTCCGAGGACCCCCGGGTCCATACGGACGGCCGGGG...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCGTCCCTCGTGGGAGTaGTGTCCGGGCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGRPSWE*CPGLQL
Trigger: CAGCTGGAGGCCCGGACACCACTCCCACGAGGGACG...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCACGGCCCGCGCCTGCTaGAAGCACTGGAAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGTARAC*KHWKSA
Trigger: GGCCGACTTCCAGTGCTTCCAGCAGGCGCGGGCCGT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGATGGCAGCCAGGTCCTaGGGCCAGGGGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPMAARS*GQGLAG
Trigger: GCCGGCCAGCCCCTGGCCCCAGGACCTGGCTGCCAT...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGTCGGGGTCATCCGTCTaGGTGACCTGCTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRSGSSV*VTCWGG
Trigger: CCCGCCCCAGCAGGTCACCCAGACGGATGACCCCGA...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGGCTCGGCCACGAAGATaGGCCAGCCCTCGGGAACCT +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRARPRR*ASPREP
Trigger: AGGTTCCCGAGGGCTGGCTCATCTTCGTGGCCGAGC...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCAGGGAGGCCCGGCTaGCCGACTCCGTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPPGRPG*PTPSFP
Trigger: AGGGAAGGACGGAGTCGGGCAGCCGGGCCTCCCTGG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGCCGCGGGTAGGGGTTaGTGTCGTGCAGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGAAGRG*CRAAAP
Trigger: TGGTGCAGCTGCACGACAGCAACCCCTACCCGCGGC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCAGCTCTCGGTCAGCCTaGGCCCGTTGGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRSSRSA*ARWGPS
Trigger: GCTCGGACCCCAACGGGCGCAGGCTGACCGAGAGCT...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGACCGGGGGCTCCCTTaGTCCCCTTATGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGDRGLP*SPYVLG
Trigger: CCCCAGGACATAAGGGGAGCAAGGGAGCCCCCGGTC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCAGCCCGGCTCTCCCTTaGCTCCTTTCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGSPALP*LLSGQG
Trigger: GCCCTGCCCAGAAAGGAGCCAAGGGAGAGCCGGGCT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCCCGGCCGTCCGTATaGACCCGGGGGTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPPRPSV*TRGSSE
Trigger: TTCCGAGGACCCCCGGGTCCATACGGACGGCCGGGG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCATTCCCTGGCAATCCTaGAGGCCCGGGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGIPWQS*RPGAAG
Trigger: TCCAGCCGCCCCGGGCCTCCAGGATTGCCAGGGAAT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCAGGGCCCTGATTCCCTaGCAATCCTGGAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGRALIP*QSWRPG
Trigger: CCCGGGCCTCCAGGATTGCCAGGGAATCAGGGCCCT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGAGGTGGAGCACCGGCTaGAAGTCGCGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRRWSTG*KSRWLW
Trigger: CCACAGCCACCGCGACTTCCAGCCGGTGCTCCACCT...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCTGCCACACGCTCTTCTaGGGCCAGGTGGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGCHTLF*GQVGCL
Trigger: GAGGCACCCCACCTGGCCCCAGAAGAGCGTGTGGCA...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCCACGGCCCGCGCCTaGTGGAAGCACTGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPPTARA*WKHWKS
Trigger: CGACTTCCAGTGCTTCCAGCAGGCGCGGGCCGTGGG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGAGGCCAGCCCCAGGCTaGTGTGCTTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRRPAPG*CAWCWR
Trigger: CCTCCAACACCAAGCACAGCAGCCTGGGGCTGGCCT...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCAGGCCAGCCCCAGGCTaGTGTGCTTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGRPAPG*CAWCWR
Trigger: CCTCCAACACCAAGCACAGCAGCCTGGGGCTGGCCT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCCTGGCTCCCCTTTCTaGCCCTTCAGGCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRPGSPF*PFRPPS
Trigger: AGAGGGCGGCCTGAAGGGGCAGAAAGGGGAGCCAGG...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCTTGCAACGCTGGGCCTaGAGGACCCAGGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGLQRWA*RTQGTH
Trigger: GTGAGTCCCCTGGGTCCTGCAGGCCCAGCGTTGCAA...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCACCCTTCTCACCCTTaGGTCCCGGGGAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRHPSHP*VPGSLV
Trigger: AACGAGGCTCCCCGGGACCCAAGGGTGAGAAGGGTG...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGAGGCCCGGGGCGGCTaGACTCAGCAAACACATTGC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGEARGG*TQQTHC
Trigger: GCAATGTGTTTGCTGAGTCCAGCCGCCCCGGGCCTC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGGCCCACTTCTCCTTTaGCGCCCTTGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGGPLLL*RPWVLE
Trigger: CTCCAGGACCCAAGGGCGCCAAAGGAGAAGTGGGCC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCGGAACCTCGTGCACCTaGCCCAGCATGGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRGTSCT*PSMAWR
Trigger: ACGCCAGGCCATGCTGGGCCAGGTGCACGAGGTTCC...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCATTGTCCGTCCCTCGTaGGAGTGGTGTCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGIVRPS*EWCPGL
Trigger: GAGGCCCGGACACCACTCCCACGAGGGACGGACAAT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGGGCTGGAAGTCGCGGTaGCTGTGGGCGGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPGWKSR*LWAGGL
Trigger: AAGCCCACCCGCCCACAGCCACCGCGACTTCCAGCC...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGGGCGAGCACACACCCTaGAGGAGCCCAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRGEHTP*RSPDGL
Trigger: AAGGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCC...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGATGAGATGGGGGCCCTaGATGGGAGGCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRMRWGP*MGGCQT
Trigger: GGTCTGGCAGCCTCCCATCCAGGGCCCCCATCTCAT...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCAGCTGGACAAGTGCTaGCTGAGCCACGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRQLDKC*LSHVPA
Trigger: GGCTGGGACGTGGCTCAGCCAGCACTTGTCCAGCTG...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCAGGGTTTCCGCCCTaGCCAAGCTCTCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRPGFPP*PSSQWG
Trigger: TCCCCACTGAGAGCTTGGCCAGGGCGGAAACCCTGG...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGTGGTCCCATTCTCCTaGGGGGTGCTGGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGVVPFS*GVLEGP
Trigger: TGGGCCTTCCAGCACCCCCCAGGAGAATGGGACCAC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCTGCTCGCCGCTCTCGTaGTGGAGGTGGTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRCSPLS*WRWLGS
Trigger: GCTGCCCAACCACCTCCACCACGAGAGCGGCGAGCA...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR TCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGTGGACAAGTGCTGGCTaGGCCACGTCCCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPWTSAG*ATSQPG
Trigger: CCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCA...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGCCCCACCTCCTCGCTaGTGCGCTCTGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRAPPPR*CALQPA
Trigger: GGCCGGCTGCAGAGCGCATCAGCGAGGAGGTGGGGC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR TCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCTCAGCTTGTCGTGTCTaGAGGAGGGTCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRSACRV*RRVLGA
Trigger: GGCCCCCAGGACCCTCCTTCAGACACGACAAGCTGA...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCAGCTGGGGGTCACAGTaGGCCTCTGAGCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGSWGSQ*ASELGN
Trigger: GTTCCCAAGCTCAGAGGCGCACTGTGACCCCCAGCT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCCCTGGATGGGAGGCTaGCAGACCCCAACTCATGGG +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRPWMGG*QTPTHG
Trigger: CCCATGAGTTGGGGTCTGGCAGCCTCCCATCCAGGG...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGCTCAGCTGGACAAGTaGTGGCTGAGCCACGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGAQLDK*WLSHVP
Trigger: TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCTGGTCAGCCTGGCGCTaGCCTGAGTCCACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRWSAWR*PESTCP
Trigger: GGGACAAGTGGACTCAGGGCAGCGCCAGGCTGACCA...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGGTATCTGCTGTGGGCTaGACAGGCAGGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPVSAVG*TGRGPW
Trigger: CCAGGGGCCCCTGCCTGTGCAGCCCACAGCAGATAC...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCTGGGTGCAGGCAAGGTaGCAGCCTCGGTTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRWVQAR*QPRLCG
Trigger: CCCACACAACCGAGGCTGGCACCTTGCCTGCACCCA...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGCGGAGGGGGCCGCGTaGTTGCCCAGGGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRAEGAA*LPREPI
Trigger: GATGGGCTCCCTGGGCAAGCACGCGGCCCCCTCCGC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGTGGCCCAGCATGGCCTaGCGTGTAGCCCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPWPSMA*RVAQSL
Trigger: GAGGCTCTGGGCTACACGCCAGGCCATGCTGGGCCA...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGGCCTGCTGGAAGCACTaGAAGTCGGCCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPACWKH*KSAPRM
Trigger: CATCCGCGGGGCCGACTTCCAGTGCTTCCAGCAGGC...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGGCCGTGTTCCATCCTaGCGCTCAGCTGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGGRVPS*RSAGQV
Trigger: CACTTGTCCAGCTGAGCGCCAGGATGGAACACGGCC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCACTGCCCTGTGTGCTaGCTACCGCATGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRHCPVC*LPHVLC
Trigger: GCACAGGACATGCGGTAGCCAGCACACAGGGCAGTG...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCGTGCTGTGGTCAGCCTaGCGCTGCCCTGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRVLWSA*RCPEST
Trigger: AGTGGACTCAGGGCAGCGCCAGGCTGACCACAGCAC...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGGGCGTTGGAGCTGCTaGCTGGGAGCGGCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRGRWSC*LGAAAA
Trigger: CGCCGCAGCCGCTCCCAGCCAGCAGCTCCAACGCCC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCCCTGGGCCCTCTGTaGCTGGCCGGATGTGGAACA +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPPLGPL*LAGCGT
Trigger: TGTTCCACATCCGGCCAGCCACAGAGGGCCCAGGGG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCAGCAGGGAGATGTCCTaGTGCCCGTCCTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRSREMS*CPSCTP
Trigger: TGGGGTGCAGGACGGGCACCAGGACATCTCCCTGCT...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGAGAATGGCCCAGAGCTaGGCAGAAGGGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPRMAQS*AEGAPP
Trigger: AGGGGGAGCCCCTTCTGCTCAGCTCTGGGCCATTCT...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGGTCACAGTGCGCCTCTaGGCTTGGGAACCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRVTVRL*AWEPAS
Trigger: TGAAGCAGGTTCCCAAGCTCAGAGGCGCACTGTGAC...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCTAGGAGACAGCCAATaGCTGCCCTGCATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGLGDSQ*LPCIWS
Trigger: GCTCCAGATGCAGGGCAGTCATTGGCTGTCTCCTAG...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGCACTGAGGGCCCCGTaGGTGGTGCCCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAALRAP*VVPRAC
Trigger: GCAGGCCCTGGGCACCACTCACGGGGCCCTCAGTGC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGACGATGGGCACGGCTaGGCGGTCGGCACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMADDGHG*AVGTAH
Trigger: GTGCGCCGTGCCGACCGCGCAGCCGTGCCCATCGTC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCGATGAAGTCAGCACCTaGTGGGGCGAGCACGGCTTC +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRDEVST*WGEHGF
Trigger: GAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTCATC...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGAGACAGCCAATGACTaGCCTGCATCTGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGETAND*PASGAS
Trigger: GCTGGCTCCAGATGCAGGGCAGTCATTGGCTGTCTC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCGTTGCACCTCGTGGCTaGTTTGTTCACCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRVAPRG*FVHPQG
Trigger: GCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCTGGCTGGGAGCGGCTaGGGCGGGCGAGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRLAGSG*GGRESL
Trigger: CAAGGACTCTCGCCCGCCGCAGCCGCTCCCAGCCAG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR GCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGAGCAAGACCATGGCCTaGGCCGAGTCCGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPSKTMA*AESVMA
Trigger: CGCCATCACGGACTCGGCGCAGGCCATGGTCTTGCT...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCTCCTTTGGCGCCCTTaGGTCCTGGAGGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPLLWRP*VLEGPD
Trigger: ATCAGGGCCCTCCAGGACCCAAGGGCGCCAAAGGAG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGGGCCCACTTCTCCTTTaGCGCCCTTGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPGPLLL*RPWVLE
Trigger: CTCCAGGACCCAAGGGCGCCAAAGGAGAAGTGGGCC...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCTCTCCCTTGGGACCTaGAATCCCAGGGTAGCCACG +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRLSLGT*NPRVAT
Trigger: CGTGGCTACCCTGGGATTCCAGGTCCCAAGGGAGAG...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCGGATGCTCTCTCCCTTaGGACCTGGAATCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGGCSLP*DLESQG
Trigger: ACCCTGGGATTCCAGGTCCCAAGGGAGAGAGCATCC...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCAGCAGCGAGGAGGCCTaGCCCGTGGCCGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAASSEEA*PVAEGA
Trigger: GGCTCCCTCGGCCACGGGCCAGGCCTCCTCGCTGCT...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGCTCCCTGCCCACGGTaGGGGCTTCCTCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAAPCPR*GLPPSR
Trigger: GCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGCTCCCTGCCCACGGTaGGGGCTTCCTCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAAPCPR*GLPPSR
Trigger: GCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGGAAGTCAGCACCTGCTaGGGCGAGCACGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPEVSTC*GEHGFP
Trigger: TGGGAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTC...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCTGGACTCGGCCAGGGTaGAGCTGTCTGCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGWTRPG*SCLLWM
Trigger: CATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCA...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGGCGAACAGCACCCCTaGGCCCTCTGTGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRGEQHP*ALCGWP
Trigger: CGGCCAGCCACAGAGGGCCCAGGGGTGCTGTTCGCC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCGTGGCGCGGGGAGCCTaGGTTTTAGGGCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPVARGA*VLGPRP
Trigger: CGGGCGCGGCCCTAAAACCCAGGCTCCCCGCGCCAC...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCACCCCAAAGCGGCCTaGCTCGCCGGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAHPKAA*LAGQAW
Trigger: CCAGGCCTGCCCGGCGAGCCAGGCCGCTTTGGGGTG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCTGCTAGGTGGGAGATaGAGTCAGCACCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPLLGGR*SQHLLG
Trigger: CCCCAGCAGGTGCTGACTTCATCTCCCACCTAGCAG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCAGATGGCCTTGTGCTaGGTGTGGCCTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPQMALC*VWPQLP
Trigger: TGGGAGCTGAGGCCACACTCAGCACAAGGCCATCTG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCGTCACAGTGCGCCTCTaGGCTTGGGAACCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRVTVRL*AWEPAS
Trigger: TGAAGCAGGTTCCCAAGCTCAGAGGCGCACTGTGAC...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCCTGGTTAAAGTGGTaGCTGCGACCTGAGACAGTG +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRPWLKW*LRPETV
Trigger: CACTGTCTCAGGTCGCAGTCACCACTTTAACCAGGG...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGAGGTCCGGGAAAGCCTaGGAAACCCGGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRRSGKA*ETRPAL
Trigger: GAGGGCCGGCCGGGTTTCGCAGGCTTTCCCGGACCT...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGGCCAGGATGTCATCTaGCCGCCAGGGCCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAGQDVI*PPGPRG
Trigger: ACCGCGCGGCCCTGGCGGGCAGATGACATCCTGGCC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCGGCCAGGATGTCATCTaGCCGCCAGGGCCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPGQDVI*PPGPRG
Trigger: ACCGCGCGGCCCTGGCGGGCAGATGACATCCTGGCC...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGGCCTCAGGACGTCCTTaGCGTCAAAGGAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRASGRP*RQRRRC
Trigger: GCATCTTCTCCTTTGACGGCAAGGACGTCCTGAGGC...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGGGAGAAATCGAGCCGTaGTCTGATCAGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRGEIEP*SDQAKR
Trigger: CCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCC...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGTGCTGTGCTTGGTGTTaGAGGACAGGCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPCCAWC*RTGRSW
Trigger: CCAGCTCCGGCCTGTCCTCCAACACCAAGCACAGCA...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCTCAGCCTCTTTGATGTaGCCGTGTTCCATCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGSASLM*PCSILA
Trigger: CGCCAGGATGGAACACGGCCACATCAAAGAGGCTGA...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCAGCTCCGGATGCCTTTaGCCACGTTCAGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRSSGCL*PRSGSR
Trigger: CCGAGATCCTGAACGTGGCCAAAGGCATCCGGAGCT...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGAAGAGGCTGGGGAAGTaGTACCGGGCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPKRLGK*YRATWP
Trigger: TGGCCAAGTGGCCCGGTACCACTTCCCCAGCCTCTT...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGGTGGCTGGCCGGATGTaGAACAGCAGTGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRVAGRM*NSSEKS
Trigger: TGACTTCTCACTGCTGTTCCACATCCGGCCAGCCAC...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCGGGGAGCCGGAAGCTaGCGGCTGTGTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMARGAGS*RLCGSG
Trigger: GCCAGACCCACACAGCCGCCAGCTTCCGGCTCCCCG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCCCTGGGGGTCCTTGTaGTCCGGGGACAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPPWGSL*SGDSLQ
Trigger: TTGCAAACTGTCCCCGGACCACAAGGACCCCCAGGG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCCCCGGGGAAGCCTTGTaGCCCGGTGTCGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPPGEAL*PGVARL
Trigger: AAGCCGGGCGACACCGGGCCACAAGGCTTCCCCGGG...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCACCGCCGTCGGGGCTaGAGATGCTGCCCGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAHRRRG*RCCPVH
Trigger: GTGAACCGGGCAGCATCTTCAGCCCCGACGGCGGTG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCCCGCATGCCGCCTaGCAGGGGGCTGTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPAPHAA*QGAVER
Trigger: GCGCTCAACAGCCCCCTGTCAGGCGGCATGCGGGGC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCGAGAGTTGGGGCAGGTaGATGTCAGCATCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRESWGR*MSASGF
Trigger: GAAGCCTGATGCTGACATTCACCTGCCCCAACTCTC...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCAATCGAGCCGTGGTCTaGTCAGGCCAAGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRNRAVV*SGQEVA
Trigger: TGCAACCTCTTGGCCTGATCAGACCACGGCTCGATT...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCTAGGAGACAGCCAATaGCTGCCCTGCATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPLGDSQ*LPCIWS
Trigger: GCTCCAGATGCAGGGCAGTCATTGGCTGTCTCCTAG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCCTGCGCCGAGTCCGTaGTGGCGAACAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAPAPSP*WRTAPL
Trigger: CAGGGGTGCTGTTCGCCATCACGGACTCGGCGCAGG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCAGCAATGCCCTCTCTaGCAGGGAGGCCGGGGAACC +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRQQCPL*QGGRGT
Trigger: GGTTCCCCGGCCTCCCTGGCAGAGAGGGCATTGCTG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCCTGGGGCCCAGCAATaGCCTCTCTGCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAPGAQQ*PLCQGG
Trigger: GCCTCCCTGGCAGAGAGGGCATTGCTGGGCCCCAGG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCAGGTCCGGGAAAGCCTaGGAAACCCGGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAARSGKA*ETRPAL
Trigger: GAGGGCCGGCCGGGTTTCGCAGGCTTTCCCGGACCT...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCCCCACGGCCCGCGCCTaGTGGAAGCACTGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPPTARA*WKHWKS
Trigger: CGACTTCCAGTGCTTCCAGCAGGCGCGGGCCGTGGG...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCATGGCCGGCCGCTCCCTaGCCACGGTGGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPWPAAP*PRWGLP
Trigger: AGGAAGCCCCCACCGTGGGCAGGGAGCGGCCGGCCA...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGGCTTCAGCCTGGGGTTaGTGTGGAGAATGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPASAWG*CGEWPR
Trigger: TCTGGGCCATTCTCCACAGCAACCCCAGGCTGAAGC...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCAGGGATCGTGGTAGCTaGATGGCTGGTGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGRDRGS*MAGVLI
Trigger: AATGAGGACACCAGCCATGCAGCTACCACGATCCCT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCAGGGTGGCTCAGGGCTaGCAGGGGCTGTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPRVAQG*QGLSLA
Trigger: AGCCAGCGACAGCCCCTGGCAGCCCTGAGCCACCCT...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCCCAGGCTGCCTTTCTaGCCAGTCCTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRPRLPF*PVLPGG
Trigger: GCCCCCAGGAAGGACTGGGCAGAAAGGCAGCCTGGG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGGGCCCTGGAGGTCCTaGGGGGCCGGGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPGPWRS*GAGHSP
Trigger: AGGGGAATGCCCGGCCCCCCAGGACCTCCAGGGCCC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGGCGCCCTTGGGTCCTaGAGGGCCCTGATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAGALGS*RALIPW
Trigger: CCAGGGAATCAGGGCCCTCCAGGACCCAAGGGCGCC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGGGGGCCGGGCAGGCTaGAGCCGAAGAAACCGCCGC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPGGRAG*SRRNRR
Trigger: GCGGCGGTTTCTTCGGCTCCAGCCTGCCCGGCCCCC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGAAGTCGCGGTGGCTGTaGGCGGGTGGGCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRKSRWL*AGGLVG
Trigger: ACCCACAAGCCCACCCGCCCACAGCCACCGCGACTT...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGAGGACAGGCCGGAGCTaGGGGTCACAGTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRRTGRS*GSQCAS
Trigger: AGAGGCGCACTGTGACCCCCAGCTCCGGCCTGTCCT...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGATGGGGGCCCTGGATaGGAGGCTGCCAGACCCCAA +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRDGGPG*EAARPQ
Trigger: TTGGGGTCTGGCAGCCTCCCATCCAGGGCCCCCATC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCTCAGCCTCTTTGATGTaGCCGTGTTCCATCCTGGCG +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRSASLM*PCSILA
Trigger: CGCCAGGATGGAACACGGCCACATCAAAGAGGCTGA...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCAGGGAGGGAGGCGATaGGGTGGGTGCAGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRQGGRR*GGCRQG
Trigger: ACCTTGCCTGCACCCACCCCATCGCCTCCCTCCCTG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCCGGACGTCAGGGCGTTaGAGCTGCTGGCTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAARTSGR*SCWLGA
Trigger: CGCTCCCAGCCAGCAGCTCCAACGCCCTGACGTCCG...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCACTCCCGTCCCACGTaGAGACAGAATCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPHSRPT*RQNLSQ
Trigger: CTGGCTCAGATTCTGTCTCCACGTGGGACGGGAGTG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGCCGCGGGTAGGGGTTaGTGTCGTGCAGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAAAGRG*CRAAAP
Trigger: TGGTGCAGCTGCACGACAGCAACCCCTACCCGCGGC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCGCCGCGGGTAGGGGTTaGTGTCGTGCAGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPAAGRG*CRAAAP
Trigger: TGGTGCAGCTGCACGACAGCAACCCCTACCCGCGGC...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCATCAGGCCAAGAGGTTaGACAGGGCATGATACTGCA +
Preference number: 4 (lower is better)
Translates to: GRSLPTVGASSEPPVLSGIRPRG*TGHDTA
Trigger: TGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGAT...GCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGTGTGTGGGTCTGGCCTaGACCTGGTTCTGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPCVGLA*TWFCVE
Trigger: CTCTACACAGAACCAGGTGCAGGCCAGACCCACACA...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGTCACCTGGGGGTCCCTaGGCACCTTCAGCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRSPGGP*APSAQR
Trigger: TCGCTGAGCTGAAGGTGCGCAGGGACCCCCAGGTGA...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCCTGGCTCCCCTTTCTaGCCCTTCAGGCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAPGSPF*PFRPPS
Trigger: AGAGGGCGGCCTGAAGGGGCAGAAAGGGGAGCCAGG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGACCGGGGGCTCCCTTaGTCCCCTTATGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAADRGLP*SPYVLG
Trigger: CCCCAGGACATAAGGGGAGCAAGGGAGCCCCCGGTC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGTCTCCCTTTGGCCCCTaGGGCCCAGCAATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRSPFGP*GPAMPS
Trigger: AGAGGGCATTGCTGGGCCCCAGGGGCCAAAGGGAGA...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCAGCCCGGCTCTCCCTTaGCTCCTTTCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMASPALP*LLSGQG
Trigger: GCCCTGCCCAGAAAGGAGCCAAGGGAGAGCCGGGCT...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCACCCCGGCCGTCCGTATaGACCCGGGGGTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPPRPSV*TRGSSE
Trigger: TTCCGAGGACCCCCGGGTCCATACGGACGGCCGGGG...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCATTCCCTGGCAATCCTaGAGGCCCGGGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAIPWQS*RPGAAG
Trigger: TCCAGCCGCCCCGGGCCTCCAGGATTGCCAGGGAAT...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCAGGGCCCTGATTCCCTaGCAATCCTGGAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMARALIP*QSWRPG
Trigger: CCCGGGCCTCCAGGATTGCCAGGGAATCAGGGCCCT...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCTGGCCCAGCATGGCCTaGCGTGTAGCCCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAWPSMA*RVAQSL
Trigger: GAGGCTCTGGGCTACACGCCAGGCCATGCTGGGCCA...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGGAACCTCGTGCACCTaGCCCAGCATGGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAGTSCT*PSMAWR
Trigger: ACGCCAGGCCATGCTGGGCCAGGTGCACGAGGTTCC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCGTCCGGGCCTCCAGCTaGACCTTCCGGAACCCGTTC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPVRASS*TFRNPF
Trigger: GAACGGGTTCCGGAAGGTCCAGCTGGAGGCCCGGAC...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGTCCGGGCCTCCAGCTaGACCTTCCGGAACCCGTTC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAVRASS*TFRNPF
Trigger: GAACGGGTTCCGGAAGGTCCAGCTGGAGGCCCGGAC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCGCCTGCTGGAAGCACTaGAAGTCGGCCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPACWKH*KSAPRM
Trigger: CATCCGCGGGGCCGACTTCCAGTGCTTCCAGCAGGC...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGTCTTCTGGGGCCAGGTaGGGTGCCTCAGGACGTCCT +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRSSGAR*GASGRP
Trigger: AGGACGTCCTGAGGCACCCCACCTGGCCCCAGAAGA...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCTGCCACACGCTCTTCTaGGGCCAGGTGGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAACHTLF*GQVGCL
Trigger: GAGGCACCCCACCTGGCCCCAGAAGAGCGTGTGGCA...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCTCAGCCTGCGCCCGTTaGGGTCCGAGCCATGCCACA +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMASACAR*GPSHAT
Trigger: TGTGGCATGGCTCGGACCCCAACGGGCGCAGGCTGA...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCAAAGCAGGAAATCCTaGAGAAATCGAGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRQSRKS*RNRAVV
Trigger: GACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTG...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGGTGGCTGGCCGGATGTaGAACAGCAGTGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPVAGRM*NSSEKS
Trigger: TGACTTCTCACTGCTGTTCCACATCCGGCCAGCCAC...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCACGGGGAGCCGGAAGCTaGCGGCTGTGTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPRGAGS*RLCGSG
Trigger: GCCAGACCCACACAGCCGCCAGCTTCCGGCTCCCCG...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCAAGGCCGGCGGGTCCTaGGACGTCGGAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPKAGGS*DVGAVH
Trigger: GTGAACAGCTCCGACGTCCCAGGACCCGCCGGCCTT...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCTCAGCTTGTCGTGTCTaGAGGAGGGTCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAASACRV*RRVLGA
Trigger: GGCCCCCAGGACCCTCCTTCAGACACGACAAGCTGA...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGCCCCACCTCCTCGCTaGTGCGCTCTGGCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFAPPPR*CALAPR
Trigger: CCGCGGAGCCAGAGCGCATCAGCGAGGAGGTGGGGC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCTTGGGGTCCGAGCCATaGCACACGCTCTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMALGSEP*HTLFWG
Trigger: GCCCCAGAAGAGCGTGTGGCATGGCTCGGACCCCAA...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGGCCGCTCCCTaGCCACGGTGGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMWPAAP*PRWGLP
Trigger: AGGAAGCCCCCACCGTGGGCAGGGAGCGGCCGGCCA...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGATGAAGTCAGCACCTaGTGGGGCGAGCACGGCTTC +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRDEVST*WGEHGF
Trigger: GAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTCATC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCCTCACTGCCCTGTGTaGTGGCTACCGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRPHCPV*WLPHVL
Trigger: CAGGACATGCGGTAGCCAGCACACAGGGCAGTGAGG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCTGGTCAGCCTGGCGCTaGCCTGAGTCCACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAWSAWR*PESTCP
Trigger: GGGACAAGTGGACTCAGGGCAGCGCCAGGCTGACCA...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGGGTCCCCAAGGAGCTaGAGCAGCCCCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPGSPRS*SSPTSS
Trigger: CGAGGAGGTGGGGCTGCTGCAGCTCCTTGGGGACCC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCTCACCTGGGGGTCCCTaGGCACCTTCAGCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAASPGGP*APSAQR
Trigger: TCGCTGAGCTGAAGGTGCGCAGGGACCCCCAGGTGA...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGGTCCGGGGACAGTTTaGAACGCTGGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAGPGTV*NAGPAG
Trigger: TCCTGCAGGCCCAGCGTTGCAAACTGTCCCCGGACC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCCCGGGGACTCCATCTaGTCCAACTTCTCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRPGDSI*SNFSLR
Trigger: GCGAAGGGAGAAGTTGGAGCAGATGGAGTCCCCGGG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCAGCCCAGGTTGCCCTTaGGTCCTGCAGGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMASPGCP*VLQVRE
Trigger: TTCCCGGACCTGCAGGACCCAAGGGCAACCTGGGCT...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCACCCTTCTCACCCTTaGGTCCCGGGGAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAHPSHP*VPGSLV
Trigger: AACGAGGCTCCCCGGGACCCAAGGGTGAGAAGGGTG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCCACCCTTCTCACCCTTaGGTCCCGGGGAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAHPSHP*VPGSLV
Trigger: AACGAGGCTCCCCGGGACCCAAGGGTGAGAAGGGTG...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGGGCCCTGGAGGTCCTaGGGGGCCGGGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEGPWRS*GAGHSP
Trigger: AGGGGAATGCCCGGCCCCCCAGGACCTCCAGGGCCC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCCTCCTTTGGCGCCCTTaGGTCCTGGAGGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPLLWRP*VLEGPD
Trigger: ATCAGGGCCCTCCAGGACCCAAGGGCGCCAAAGGAG...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGGGGGCCGGGCAGGCTaGAGCCGAAGAAACCGCCGC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMGGRAG*SRRNRR
Trigger: GCGGCGGTTTCTTCGGCTCCAGCCTGCCCGGCCCCC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGGGGGCCGGGCAGGCTaGAGCCGAAGAAACCGCCGC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEGGRAG*SRRNRR
Trigger: GCGGCGGTTTCTTCGGCTCCAGCCTGCCCGGCCCCC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAACGGCCCGCGCCTGCTaGAAGCACTGGAAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPTARAC*KHWKSA
Trigger: GGCCGACTTCCAGTGCTTCCAGCAGGCGCGGGCCGT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCAGCAGCGAGGAGGCCTaGCCCGTGGCCGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFSSEEA*PVAEGA
Trigger: GGCTCCCTCGGCCACGGGCCAGGCCTCCTCGCTGCT...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGGCGAGCACACACCCTaGAGGAGCCCAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAGEHTP*RSPDGL
Trigger: AAGGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCATGAGATGGGGGCCCTaGATGGGAGGCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPMRWGP*MGGCQT
Trigger: GGTCTGGCAGCCTCCCATCCAGGGCCCCCATCTCAT...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGGCCGCTCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGATCGTGGTAGCTGCATaGCTGGTGTCCTCATTATTG +
Preference number: 4 (lower is better)
Translates to: RPLPAHGGGFLRAAGPLRIVVAA*LVSSLL
Trigger: CAATAATGAGGACACCAGCCATGCAGCTACCACGAT...CCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGCGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCTGGGCCCTCTGTGGCTaGCCGGATGTGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPWALCG*PDVEQQ
Trigger: CTGCTGTTCCACATCCGGCCAGCCACAGAGGGCCCA...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTGTGGCGCGGGGAGCCTaGGTTTTAGGGCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFVARGA*VLGPRP
Trigger: CGGGCGCGGCCCTAAAACCCAGGCTCCCCGCGCCAC...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGTGGCGCGGGGAGCCTaGGTTTTAGGGCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMVARGA*VLGPRP
Trigger: CGGGCGCGGCCCTAAAACCCAGGCTCCCCGCGCCAC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCCCTGGGGGTCCTTGTaGTCCGGGGACAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRPWGSL*SGDSLQ
Trigger: TTGCAAACTGTCCCCGGACCACAAGGACCCCCAGGG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCTCCCTTGTCGCCCTTaGGACCTACGTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMALPCRP*DLRPLE
Trigger: CTCCAGGGGACGTAGGTCCCAAGGGCGACAAGGGAG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGCTCCCCTTATGTCCTaGGGCGCCTGCTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAAPLMS*GACFTQ
Trigger: CTGGGTGAAGCAGGCGCCCCAGGACATAAGGGGAGC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCGCTCCCCTTATGTCCTaGGGCGCCTGCTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPAPLMS*GACFTQ
Trigger: CTGGGTGAAGCAGGCGCCCCAGGACATAAGGGGAGC...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCGTTTCGTCGCAGTCCTaGGGCAGGTGCGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPVSSQS*GRCVLA
Trigger: AGCCAACACGCACCTGCCTCAGGACTGCGACGAAAC...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGCACTGAGGGCCCCGTaGGTGGTGCCCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLALRAP*VVPRAC
Trigger: GCAGGCCCTGGGCACCACTCACGGGGCCCTCAGTGC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR TCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAAGATGGTGGTGGCACTaGGGGCCCCGTGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPRWWWH*GPREWC
Trigger: GCACCACTCACGGGGCCCTCAGTGCCACCACCATCT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTCGCGGATGCCCCGCATaGCGCCTGACAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFRGCPA*RLTGGC
Trigger: ACAGCCCCCTGTCAGGCGGCATGCGGGGCATCCGCG...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCGCGGATGCCCCGCATaGCGCCTGACAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVERGCPA*RLTGGC
Trigger: ACAGCCCCCTGTCAGGCGGCATGCGGGGCATCCGCG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGAGTCGGCCCCGCGGATaGCCCGCATGCCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSRPRG*PACRLT
Trigger: TGTCAGGCGGCATGCGGGGCATCCGCGGGGCCGACT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCACGGCACGGCGCACGATaGTGTACAGGTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPRHGAR*CTGPAG
Trigger: GCCTGCAGGACCTGTACAGCATCGTGCGCCGTGCCG...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCAAAGGAGAAGATGCGTaGCCCGGGCTTCAGCGGACC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAKGEDA*PGLQRT
Trigger: GGTCCGCTGAAGCCCGGGGCACGCATCTTCTCCTTT...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCAAAGGAGAAGATGCGTaGCCCGGGCTTCAGCGGACC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPKGEDA*PGLQRT
Trigger: GGTCCGCTGAAGCCCGGGGCACGCATCTTCTCCTTT...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCGTCAAAGGAGAAGATaGGTGCCCCGGGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMARQRRR*VPRASA
Trigger: CGCTGAAGCCCGGGGCACGCATCTTCTCCTTTGACG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCCGTCAAAGGAGAAGATaGGTGCCCCGGGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPRQRRR*VPRASA
Trigger: CGCTGAAGCCCGGGGCACGCATCTTCTCCTTTGACG...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGCTTCAGCCTGGGGTTaGTGTGGAGAATGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRASAWG*CGEWPR
Trigger: TCTGGGCCATTCTCCACAGCAACCCCAGGCTGAAGC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGCTCAGCTGGACAAGTaGTGGCTGAGCCACGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAAQLDK*WLSHVP
Trigger: TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGAGACAGCCAATGACTaGCCTGCATCTGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRETAND*PASGAS
Trigger: GCTGGCTCCAGATGCAGGGCAGTCATTGGCTGTCTC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCGTCCCCGAGCCCGCTaGCAGAGTCTCCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVERPRAR*QSLRMP
Trigger: GGGCATCCGGAGACTCTGGCAGCGGGCTCGGGGACG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCAATCTTCCGTGCTGCTaGCTCCAGCCAAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMANLPCC*LQPRVA
Trigger: CGCCACCCTTGGCTGGAGGCAGCAGCACGGAAGATT...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCACCCAGGCTGCCTTTCTaGCCAGTCCTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPPRLPF*PVLPGG
Trigger: GCCCCCAGGAAGGACTGGGCAGAAAGGCAGCCTGGG...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCAGGTCCGGGGGCTCCTaGCAGGCCGCTCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIRSGGS*QAALPT
Trigger: CGTGGGGAGAGCGGCCTGGCAGGAGCCCCCGGACCT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCCCCGGCCGTCCGTATaGACCCGGGGGTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFPRPSV*TRGSSE
Trigger: TTCCGAGGACCCCCGGGTCCATACGGACGGCCGGGG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGGGGGCCGGGCAGGCTaGAGCCGAAGAAACCGCCGC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIGGRAG*SRRNRR
Trigger: GCGGCGGTTTCTTCGGCTCCAGCCTGCCCGGCCCCC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGGAACCTCGTGCACCTaGCCCAGCATGGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPGTSCT*PSMAWR
Trigger: ACGCCAGGCCATGCTGGGCCAGGTGCACGAGGTTCC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGATGGCAGCCAGGTCCTaGGGCCAGGGGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLMAARS*GQGLAG
Trigger: GCCGGCCAGCCCCTGGCCCCAGGACCTGGCTGCCAT...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCAAAGCAGGAAATCCTaGAGAAATCGAGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: SLPTVGASSEPPVLSGHPQSRKS*RNRAVV
Trigger: GACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTG...CGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCCTGGAGGAGCCCAGATaGCCTTGTGCTGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPLEEPR*PCAECG
Trigger: GCCACACTCAGCACAAGGCCATCTGGGCTCCTCCAG...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCTGGAGGAGCCCAGATaGCCTTGTGCTGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMALEEPR*PCAECG
Trigger: GCCACACTCAGCACAAGGCCATCTGGGCTCCTCCAG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAAGGACAGGCCGGAGCTaGGGGTCACAGTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPRTGRS*GSQCAS
Trigger: AGAGGCGCACTGTGACCCCCAGCTCCGGCCTGTCCT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCTGCTGTGCTTGGTGTTaGAGGACAGGCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAACCAWC*RTGRSW
Trigger: CCAGCTCCGGCCTGTCCTCCAACACCAAGCACAGCA...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCGTGGTGGAGGTGGTTaGGCAGCCAGAAGCGTGAGA +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMARGGGG*AARSVR
Trigger: TCTCACGCTTCTGGCTGCCCAACCACCTCCACCACG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCGGGGAGCCGGAAGCTaGCGGCTGTGTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFRGAGS*RLCGSG
Trigger: GCCAGACCCACACAGCCGCCAGCTTCCGGCTCCCCG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGCCTGCCCGGCCAGGTaGGCCCGGAACACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLACPAR*ARNTWL
Trigger: GAGCCAGGTGTTCCGGGCCCACCTGGCCGGGCAGGC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCACCCAGGGGACTCACTaGGCACGGGAGACCCGGGGG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFTQGTH*ARETRG
Trigger: CCCCCGGGTCTCCCGTGCCCAGTGAGTCCCCTGGGT...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAAGGCCCTTGGGGTCCTaGGGGCCCTCTCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPRPLGS*GPSLSN
Trigger: GTTGGAGAGAGAGGGCCCCCAGGACCCCAAGGGCCT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCACCCCAAAGCGGCCTaGCTCGCCGGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIHPKAA*LAGQAW
Trigger: CCAGGCCTGCCCGGCGAGCCAGGCCGCTTTGGGGTG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGCCGGGAGGTCCCTGTaGCCCATCAGCGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMAGRSL*PISASG
Trigger: GCCCGAAGCGCTGATGGGCCACAGGGACCTCCCGGC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCAGGTTGCACAGGGCATaGTACTGCACCCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPRLHRA*YCTLPD
Trigger: GTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCT...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCAGGTTGCACAGGGCATaGTACTGCACCCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMARLHRA*YCTLPD
Trigger: GTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCT...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCCAGCCTCAGCCTCTTTaGTGTGGCCGTGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPQPQPL*CGRVPS
Trigger: GGATGGAACACGGCCACATCAAAGAGGCTGAGGCTG...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCAGGGGTGGCTGTGACTaGCAGAGGACCTTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPRGGCD*QRTLLH
Trigger: GTGCAACAAGGTCCTCTGTCAGTCACAGCCACCCCT...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCCTGCGCCGAGTCCGTaGTGGCGAACAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEPAPSP*WRTAPL
Trigger: CAGGGGTGCTGTTCGCCATCACGGACTCGGCGCAGG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTCAGCTCCAGGCCCCGTaGGGACCGAGCAAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFQLQAP*GPSKRH
Trigger: ATGCCGCTTGCTCGGTCCTCACGGGGCCTGGAGCTG...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTACGCCCGTCTCCTCCCTaGGAAGCTCCCGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLRPSPP*EAPGRP
Trigger: GGGACGCCCGGGAGCTTCTCAGGGAGGAGACGGGCG...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGAGCCAGGAAGTGTCTaGGCTCCTAACGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAEPGSV*APNEAT
Trigger: GGTGGCTTCGTTAGGAGCTCAGACACTTCCTGGCTC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTCCAGAGCCTCACCCCTaGGGAGGCGCCCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFPEPHP*GGAHGS
Trigger: GGAACCATGGGCGCCTCCTCAGGGGTGAGGCTCTGG...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGCGGGCATTCCCCTCATaGCAAATCCAAGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRRAFPS*QIQGWH
Trigger: ATGCCAGCCTTGGATTTGGCATGAGGGGAATGCCCG...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCAGTCGGCCCCGCGGATaGCCCGCATGCCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSISRPRG*PACRLT
Trigger: TGTCAGGCGGCATGCGGGGCATCCGCGGGGCCGACT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGTGGGGCCAGGTGGGGTaGCTCAGGACGTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEWGQVG*LRTSLP
Trigger: CGGCAAGGACGTCCTGAGGCACCCCACCTGGCCCCA...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGAGCTCTCGGTCAGCCTaGGCCCGTTGGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSSRSA*ARWGPS
Trigger: GCTCGGACCCCAACGGGCGCAGGCTGACCGAGAGCT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGAGCTCTCGGTCAGCCTaGGCCCGTTGGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVESSRSA*ARWGPS
Trigger: GCTCGGACCCCAACGGGCGCAGGCTGACCGAGAGCT...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCCATGATACTGCACCCTaGCTGACCCAGCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAHDTAP*LTQLGS
Trigger: TGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATG...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGAGACAGCCAATGACTaGCCTGCATCTGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAETAND*PASGAS
Trigger: GCTGGCTCCAGATGCAGGGCAGTCATTGGCTGTCTC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGTGTGTGGTGGTATCTaGTGTGGGCTGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAVCGGI*CGLHRQ
Trigger: CTGCCTGTGCAGCCCACAGCAGATACCACCACACAC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTAGGGTGGCTCAGGGCTaGCAGGGGCTGTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFRVAQG*QGLSLA
Trigger: AGCCAGCGACAGCCCCTGGCAGCCCTGAGCCACCCT...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGGACGAAGCTCCGGATaGCTTTGGCCACGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAGRSSG*LWPRSG
Trigger: TCCTGAACGTGGCCAAAGGCATCCGGAGCTTCGTCC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCCTGCTTCACCCAGGCTaGCTTTCTGCCCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPLLHPG*LSAQSF
Trigger: GAAGGACTGGGCAGAAAGGCAGCCTGGGTGAAGCAG...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCTGCCAAATCCAAGGCTaGCATCTCCCGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMACQIQG*HLPAPL
Trigger: AAGGGGAGCCGGGAGATGCCAGCCTTGGATTTGGCA...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGGCGCCCTTGGGTCCTaGAGGGCCCTGATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEGALGS*RALIPW
Trigger: CCAGGGAATCAGGGCCCTCCAGGACCCAAGGGCGCC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCGTCCCTCGTGGGAGTaGTGTCCGGGCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVERPSWE*CPGLQL
Trigger: CAGCTGGAGGCCCGGACACCACTCCCACGAGGGACG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGGCTGGAAGTCGCGGTaGCTGTGGGCGGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMGWKSR*LWAGGL
Trigger: AAGCCCACCCGCCCACAGCCACCGCGACTTCCAGCC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTACGGCCCGCGCCTGCTaGAAGCACTGGAAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFTARAC*KHWKSA
Trigger: GGCCGACTTCCAGTGCTTCCAGCAGGCGCGGGCCGT...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAAGCAGCGAGGAGGCCTaGCCCGTGGCCGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLSSEEA*PVAEGA
Trigger: GGCTCCCTCGGCCACGGGCCAGGCCTCCTCGCTGCT...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCTCCGCATCCAGGCGGTaGCTACTTGGAGGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMASASRR*LLGGSH
Trigger: ATGACTGCCTCCAAGTAGCCACCGCCTGGATGCGGA...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCTCCGCATCCAGGCGGTaGCTACTTGGAGGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPSASRR*LLGGSH
Trigger: ATGACTGCCTCCAAGTAGCCACCGCCTGGATGCGGA...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGAAGTCAGCACCTGCTaGGGCGAGCACGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPEVSTC*GEHGFP
Trigger: TGGGAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGGCGAGCACACACCCTaGAGGAGCCCAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPGEHTP*RSPDGL
Trigger: AAGGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTTGCACCTCGTGGCTGCTTTGTTCACCCGCAGGGCGGCCTGTGGGCACCCCGGGGTTGCTGTGGAGAATaGCCCAGAGCTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VAPRGCFVHPQGGLWAPRGCCGE*PRAEQK
Trigger: CTTCTGCTCAGCTCTGGGCCATTCTCCACAGCAACC...CCGGGGTGCCCACAGGCCGCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTCAGGTTCAGCAGGTTaGCCCGGGCAGCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSGSAG*PGQPPG
Trigger: GCCTGGCGGCTGCCCGGGCCAACCTGCTGAACCTGA...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGGGTCACGTGTGTGGTaGTATCTGCTGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAGSRVW*YLLWAA
Trigger: TGCAGCCCACAGCAGATACCACCACACACGTGACCC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTCGGGGTCATCCGTCTaGGTGACCTGCTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFSGSSV*VTCWGG
Trigger: CCCGCCCCAGCAGGTCACCCAGACGGATGACCCCGA...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGGCGAACAGCACCCCTaGGCCCTCTGTGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIGEQHP*ALCGWP
Trigger: CGGCCAGCCACAGAGGGCCCAGGGGTGCTGTTCGCC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCCACTCCCGTCCCACGTaGAGACAGAATCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAHSRPT*RQNLSQ
Trigger: CTGGCTCAGATTCTGTCTCCACGTGGGACGGGAGTG...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCCCGGGGAAGCCTTGTaGCCCGGTGTCGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIPGEAL*PGVARL
Trigger: AAGCCGGGCGACACCGGGCCACAAGGCTTCCCCGGG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CAA 72 bp GGATGGGAGGCTGCCAGACCCCAACTCATGGGTCCCTaGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GWEAARPQLMGP*NLPAWTRPGWS
Trigger: GCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGTCTGGCAGCCTCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGCTCGGCCACGAAGATaGGCCAGCCCTCGGGAACCT +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFARPRR*ASPREP
Trigger: AGGTTCCCGAGGGCTGGCTCATCTTCGTGGCCGAGC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGAGAGTTGGGGCAGGTaGATGTCAGCATCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAESWGR*MSASGF
Trigger: GAAGCCTGATGCTGACATTCACCTGCCCCAACTCTC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCTCTCAGGGGTGGCTGTaGCTGACAGAGGACCTTGTT +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMASQGWL*LTEDLV
Trigger: AACAAGGTCCTCTGTCAGTCACAGCCACCCCTGAGA...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCTCTCAGGGGTGGCTGTaGCTGACAGAGGACCTTGTT +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPSQGWL*LTEDLV
Trigger: AACAAGGTCCTCTGTCAGTCACAGCCACCCCTGAGA...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCCCTCCACAGAACGAATaGCTCGGGTTGATGTTGCCG +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPPPQNE*LGLMLP
Trigger: CGGCAACATCAACCCGAGTCATTCGTTCTGTGGAGG...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCCTGCGCCGAGTCCGTaGTGGCGAACAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLPAPSP*WRTAPL
Trigger: CAGGGGTGCTGTTCGCCATCACGGACTCGGCGCAGG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCGCCCGTCTCCTCCCTaGGAAGCTCCCGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDRPSPP*EAPGRP
Trigger: GGGACGCCCGGGAGCTTCTCAGGGAGGAGACGGGCG...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCCAGAGCCTCACCCCTaGGGAGGCGCCCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLPEPHP*GGAHGS
Trigger: GGAACCATGGGCGCCTCCTCAGGGGTGAGGCTCTGG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGCAGCAATGCCCTCTCTaGCAGGGAGGCCGGGGAACC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMQQCPL*QGGRGT
Trigger: GGTTCCCCGGCCTCCCTGGCAGAGAGGGCATTGCTG...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCCAGGGAGGCCCGGCTaGCCGACTCCGTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVPGRPG*PTPSFP
Trigger: AGGGAAGGACGGAGTCGGGCAGCCGGGCCTCCCTGG...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGCCGCGGGTAGGGGTTaGTGTCGTGCAGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFAAGRG*CRAAAP
Trigger: TGGTGCAGCTGCACGACAGCAACCCCTACCCGCGGC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCCCACGGCCCGCGCCTaGTGGAAGCACTGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIPTARA*WKHWKS
Trigger: CGACTTCCAGTGCTTCCAGCAGGCGCGGGCCGTGGG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAAAAGGAGAAGATGCGTaGCCCGGGCTTCAGCGGACC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPKGEDA*PGLQRT
Trigger: GGTCCGCTGAAGCCCGGGGCACGCATCTTCTCCTTT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGGTGCAGAAGTGGCGTaGGCAGGCGGACGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIGAEVA*AGGRQG
Trigger: GCCCTGACGTCCGCCTGCGCACGCCACTTCTGCACC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCCCATCACCAGGGGGTaGAGAAGTGGCGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEPITRG*RSGVRR
Trigger: CCTGCGCACGCCACTTCTGCACCCCCTGGTGATGGG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGCGACCTGAGACAGTaGGCCCGGGAGCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFCDLRQ*AREPRG
Trigger: TCCTCTGGGCTCCCGGGCGCACTGTCTCAGGTCGCA...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTCCTCGTCCAGGCAGTaGATGGGGCTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSSSRQ*MGLTWG
Trigger: CCCCCAGGTGAGCCCCATGCACTGCCTGGACGAGGA...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCCCAGGCTGCCTTTCTaGCCAGTCCTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEPRLPF*PVLPGG
Trigger: GCCCCCAGGAAGGACTGGGCAGAAAGGCAGCCTGGG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGAGCCCGGCTCTCCCTTaGCTCCTTTCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSPALP*LLSGQG
Trigger: GCCCTGCCCAGAAAGGAGCCAAGGGAGAGCCGGGCT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGGCTGGAAGTCGCGGTaGCTGTGGGCGGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLGWKSR*LWAGGL
Trigger: AAGCCCACCCGCCCACAGCCACCGCGACTTCCAGCC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGACGGCCCGCGCCTGCTaGAAGCACTGGAAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLTARAC*KHWKSA
Trigger: GGCCGACTTCCAGTGCTTCCAGCAGGCGCGGGCCGT...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATAGCAGCGAGGAGGCCTaGCCCGTGGCCGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDSSEEA*PVAEGA
Trigger: GGCTCCCTCGGCCACGGGCCAGGCCTCCTCGCTGCT...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATGCTCCCTGCCCACGGTaGGGGCTTCCTCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDAPCPR*GLPPSR
Trigger: GCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGC...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGCCAGGGGCATGAGATaGGGGCCCTGGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIARGMR*GPWMGG
Trigger: GCCTCCCATCCAGGGCCCCCATCTCATGCCCCTGGC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCTCAGGTTCAGCAGGTTaGCCCGGGCAGCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSISGSAG*PGQPPG
Trigger: GCCTGGCGGCTGCCCGGGCCAACCTGCTGAACCTGA...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCACAGGCAGGGGCCCCTaGGGCTCAGGGATCGTGGTA +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFTGRGP*GSGIVV
Trigger: TACCACGATCCCTGAGCCCCAGGGGCCCCTGCCTGT...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAGGCTCTCGGCAGAAGTaGGGGTGTCCTGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPGSRQK*GCPGHL
Trigger: AAGATGGCCAGGACACCCCCACTTCTGCCGAGAGCC...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCAGGGGGTGCAGAAGTaGCGTGCGCAGGCGGACGTC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLQGVQK*RAQADV
Trigger: GACGTCCGCCTGCGCACGCCACTTCTGCACCCCCTG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCTCGCCGCTCTCGTGGTaGAGGTGGTTGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFSPLSW*RWLGSQ
Trigger: CTGGCTGCCCAACCACCTCCACCACGAGAGCGGCGA...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACGGGACGCTGCCGCATaGGGGGACCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRRDAAA*GDQQQA
Trigger: TGCCTGCTGCTGGTCCCCCCATGCGGCAGCGTCCCG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAAGGGCCTCGCAGAACTaGCAGCAGGGTGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRRASQN*QQGGGA
Trigger: CGCCCCGCCACCCTGCTGCCAGTTCTGCGAGGCCCT...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAAAGAGGCTGGGGAAGTaGTACCGGGCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPKRLGK*YRATWP
Trigger: TGGCCAAGTGGCCCGGTACCACTTCCCCAGCCTCTT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCACACGGAAGAAGAGGCTaGGGAAGTGGTACCGGGCCA +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPHGRRG*GSGTGP
Trigger: TGGCCCGGTACCACTTCCCCAGCCTCTTCTTCCGTG...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTCTGAAGGAGGGTCCTaGGGGCCCTGGAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSEGGS*GPWRPL
Trigger: CAAGGGCCTCCAGGGCCCCCAGGACCCTCCTTCAGA...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCTCTGAAGGAGGGTCCTaGGGGCCCTGGAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFSEGGS*GPWRPL
Trigger: CAAGGGCCTCCAGGGCCCCCAGGACCCTCCTTCAGA...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGCCGGGAGGTCCCTGTaGCCCATCAGCGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLAGRSL*PISASG
Trigger: GCCCGAAGCGCTGATGGGCCACAGGGACCTCCCGGC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAGCCGGGAGGTCCCTGTaGCCCATCAGCGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRAGRSL*PISASG
Trigger: GCCCGAAGCGCTGATGGGCCACAGGGACCTCCCGGC...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACACCGCCGTCGGGGCTaGAGATGCTGCCCGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRHRRRG*RCCPVH
Trigger: GTGAACCGGGCAGCATCTTCAGCCCCGACGGCGGTG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCACCGCCGTCGGGGCTaGAGATGCTGCCCGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVHRRRG*RCCPVH
Trigger: GTGAACCGGGCAGCATCTTCAGCCCCGACGGCGGTG...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGCTCGGCCACGAAGATaGGCCAGCCCTCGGGAACCT +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLARPRR*ASPREP
Trigger: AGGTTCCCGAGGGCTGGCTCATCTTCGTGGCCGAGC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCTAGCCCCAGGGACCTaGGCCTCCCTCCCATCTACC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLLAPGT*ASLPST
Trigger: GGTAGATGGGAGGGAGGCTCAGGTCCCTGGGGCTAG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCTAGCCCCAGGGACCTaGGCCTCCCTCCCATCTACC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSILAPGT*ASLPST
Trigger: GGTAGATGGGAGGGAGGCTCAGGTCCCTGGGGCTAG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCAACTCATGGGTCCCTTaGATCTCCCAGCTTGGACTC +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAANSWVP*ISQLGL
Trigger: GAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTT...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCACAGCCTCAGCCTCTTTaGTGTGGCCGTGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPQPQPL*CGRVPS
Trigger: GGATGGAACACGGCCACATCAAAGAGGCTGAGGCTG...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTACAGCTCCAGGCCCCGTaGGGACCGAGCAAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLQLQAP*GPSKRH
Trigger: ATGCCGCTTGCTCGGTCCTCACGGGGCCTGGAGCTG...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCTTCGCCTTTCTGTCCTaGATCACCTCGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAAFAFLS*ITSVSL
Trigger: AAGGGAGACCGAGGTGATGCAGGACAGAAAGGCGAA...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGTCGGCCCCGCGGATaGCCCGCATGCCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPSRPRG*PACRLT
Trigger: TGTCAGGCGGCATGCGGGGCATCCGCGGGGCCGACT...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCGGCACGGCGCACGATaGTGTACAGGTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIRHGAR*CTGPAG
Trigger: GCCTGCAGGACCTGTACAGCATCGTGCGCCGTGCCG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGATGGGGCCAGGTGGGGTaGCTCAGGACGTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRWGQVG*LRTSLP
Trigger: CGGCAAGGACGTCCTGAGGCACCCCACCTGGCCCCA...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTTGGGGTCCGAGCCATaGCACACGCTCTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFLGSEP*HTLFWG
Trigger: GCCCCAGAAGAGCGTGTGGCATGGCTCGGACCCCAA...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGAGCTCTCGGTCAGCCTaGGCCCGTTGGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVSSRSA*ARWGPS
Trigger: GCTCGGACCCCAACGGGCGCAGGCTGACCGAGAGCT...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTAGGCCAGCCCCAGGCTaGTGTGCTTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFRPAPG*CAWCWR
Trigger: CCTCCAACACCAAGCACAGCAGCCTGGGGCTGGCCT...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGTGGTCAGCCTGGCGCTaGCCTGAGTCCACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEWSAWR*PESTCP
Trigger: GGGACAAGTGGACTCAGGGCAGCGCCAGGCTGACCA...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGGTGCGTGTTGGCTGTaGTGTGGTCAGCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMGACWL*CGQPGA
Trigger: AGCGCCAGGCTGACCACAGCACAGCCAACACGCACC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCTGGGTGCAGGCAAGGTaGCAGCCTCGGTTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFWVQAR*QPRLCG
Trigger: CCCACACAACCGAGGCTGGCACCTTGCCTGCACCCA...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGAGCAAGACCATGGCCTaGGCCGAGTCCGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSKTMA*AESVMA
Trigger: CGCCATCACGGACTCGGCGCAGGCCATGGTCTTGCT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGAAGCCACCGTGGTCTaGTCCTCGACTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAEATVV*SSTSSL
Trigger: AAGTGAAGAAGTCGAGGAGCAGACCACGGTGGCTTC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCCTGGCTCCCCTTTCTaGCCCTTCAGGCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLPGSPF*PFRPPS
Trigger: AGAGGGCGGCCTGAAGGGGCAGAAAGGGGAGCCAGG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTGGTCCGGGGACAGTTTaGAACGCTGGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFGPGTV*NAGPAG
Trigger: TCCTGCAGGCCCAGCGTTGCAAACTGTCCCCGGACC...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTCTCCCTTTGGCCCCTaGGGCCCAGCAATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSPFGP*GPAMPS
Trigger: AGAGGGCATTGCTGGGCCCCAGGGGCCAAAGGGAGA...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCATGCCAAATCCAAGGCTaGCATCTCCCGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPCQIQG*HLPAPL
Trigger: AAGGGGAGCCGGGAGATGCCAGCCTTGGATTTGGCA...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCCCTGGAGGTCCTaGGGGGCCGGGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTGPWRS*GAGHSP
Trigger: AGGGGAATGCCCGGCCCCCCAGGACCTCCAGGGCCC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGAGGCCCGGGGCGGCTaGACTCAGCAAACACATTGC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEEARGG*TQQTHC
Trigger: GCAATGTGTTTGCTGAGTCCAGCCGCCCCGGGCCTC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGGCCCACTTCTCCTTTaGCGCCCTTGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEGPLLL*RPWVLE
Trigger: CTCCAGGACCCAAGGGCGCCAAAGGAGAAGTGGGCC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGTGGCCCAGCATGGCCTaGCGTGTAGCCCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLWPSMA*RVAQSL
Trigger: GAGGCTCTGGGCTACACGCCAGGCCATGCTGGGCCA...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACGTCCCTCGTGGGAGTaGTGTCCGGGCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRRPSWE*CPGLQL
Trigger: CAGCTGGAGGCCCGGACACCACTCCCACGAGGGACG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCATTGTCCGTCCCTCGTaGGAGTGGTGTCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFIVRPS*EWCPGL
Trigger: GAGGCCCGGACACCACTCCCACGAGGGACGGACAAT...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGAAGTCGCGGTGGCTGTaGGCGGGTGGGCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLKSRWL*AGGLVG
Trigger: ACCCACAAGCCCACCCGCCCACAGCCACCGCGACTT...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGAGGTGGAGCACCGGCTaGAAGTCGCGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLRWSTG*KSRWLW
Trigger: CCACAGCCACCGCGACTTCCAGCCGGTGCTCCACCT...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAATGGCAGCCAGGTCCTaGGGCCAGGGGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTMAARS*GQGLAG
Trigger: GCCGGCCAGCCCCTGGCCCCAGGACCTGGCTGCCAT...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGATGGGGGCCCTGGATaGGAGGCTGCCAGACCCCAA +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLDGGPG*EAARPQ
Trigger: TTGGGGTCTGGCAGCCTCCCATCCAGGGCCCCCATC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCATGAGATGGGGGCCCTaGATGGGAGGCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFMRWGP*MGGCQT
Trigger: GGTCTGGCAGCCTCCCATCCAGGGCCCCCATCTCAT...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCAGCTGGACAAGTGCTaGCTGAGCCACGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFQLDKC*LSHVPA
Trigger: GGCTGGGACGTGGCTCAGCCAGCACTTGTCCAGCTG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCAGCTGGACAAGTGCTaGCTGAGCCACGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEQLDKC*LSHVPA
Trigger: GGCTGGGACGTGGCTCAGCCAGCACTTGTCCAGCTG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGGTGGTATCTGCTGTaGGCTGCACAGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFWWYLL*AAQAGA
Trigger: GGCCCCTGCCTGTGCAGCCCACAGCAGATACCACCA...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAAGCTCCGGATGCCTTTaGCCACGTTCAGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPSSGCL*PRSGSR
Trigger: CCGAGATCCTGAACGTGGCCAAAGGCATCCGGAGCT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCGTGAGATGCCCAGGTaGCCGCAGACTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLREMPR*PQTGRE
Trigger: CTCCCTGCCAGTCTGCGGCCACCTGGGCATCTCACG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGCAGTACCCATCCTCCTaGGTCGGGAGCGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMQYPSS*VGSEAQ
Trigger: CTGTGCCTCGCTCCCGACCCAGGAGGATGGGTACTG...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGGCCCTCTGTGGCTaGCCGGATGTGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMWALCG*PDVEQQ
Trigger: CTGCTGTTCCACATCCGGCCAGCCACAGAGGGCCCA...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCCCCTGGGCCCTCTGTaGCTGGCCGGATGTGGAACA +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLPLGPL*LAGCGT
Trigger: TGTTCCACATCCGGCCAGCCACAGAGGGCCCAGGGG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAGGCGAACAGCACCCCTaGGCCCTCTGTGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPGEQHP*ALCGWP
Trigger: CGGCCAGCCACAGAGGGCCCAGGGGTGCTGTTCGCC...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGAGCAGGGAGATGTCCTaGTGCCCGTCCTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSREMS*CPSCTP
Trigger: TGGGGTGCAGGACGGGCACCAGGACATCTCCCTGCT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTGCGGCTGTGTGGGTCTaGCCTGCACCTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFAAVWV*PAPGSV
Trigger: CACAGAACCAGGTGCAGGCCAGACCCACACAGCCGC...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCATCAGCGATCACCCCCTaGAACTTGTCAGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPSAITP*NLSGSA
Trigger: AGCGGACCCTGACAAGTTCCAGGGGGTGATCGCTGA...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGGTCCTGGAGGGCCCTaGTTCCCTGGCAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIGPGGP*FPGNPG
Trigger: TCCAGGATTGCCAGGGAATCAGGGCCCTCCAGGACC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGCTGCTAGGTGGGAGATaGAGTCAGCACCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMLLGGR*SQHLLG
Trigger: CCCCAGCAGGTGCTGACTTCATCTCCCACCTAGCAG...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTCAGATGGCCTTGTGCTaGGTGTGGCCTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFQMALC*VWPQLP
Trigger: TGGGAGCTGAGGCCACACTCAGCACAAGGCCATCTG...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACTAGCCCCAGGGACCTaGGCCTCCCTCCCATCTACC +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRLAPGT*ASLPST
Trigger: GGTAGATGGGAGGGAGGCTCAGGTCCCTGGGGCTAG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGTTTCGTCGCAGTCCTaGGGCAGGTGCGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFVSSQS*GRCVLA
Trigger: AGCCAACACGCACCTGCCTCAGGACTGCGACGAAAC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGCAGTCCTGAGGCAGGTGCGTGTTGGCTGTGCTGTGGTCAGCCTGGCGCTGCCGATGTGGAACAGCAGTaGGAAGTCACGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RSPEAGACWLCCGQPGAADVEQQ*EVTEEE
Trigger: CTCTTCTTCCGTGACTTCTCACTGCTGTTCCACATC...GGCAGCGCCAGGCTGACCACAGCACAGCCAACACGCACCTGCCTCAGGACTGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGTCAGCTTGTCGTGTCTaGAGGAGGGTCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLSACRV*RRVLGA
Trigger: GGCCCCCAGGACCCTCCTTCAGACACGACAAGCTGA...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGTTGCCCTTGGGTCCTaGAGGTCCGGGAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIVALGS*RSGKAC
Trigger: GCAGGCTTTCCCGGACCTGCAGGACCCAAGGGCAAC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCAAAGGAGAAGATGCGTaGCCCGGGCTTCAGCGGACC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFKGEDA*PGLQRT
Trigger: GGTCCGCTGAAGCCCGGGGCACGCATCTTCTCCTTT...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCGTCAAAGGAGAAGATaGGTGCCCCGGGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVERQRRR*VPRASA
Trigger: CGCTGAAGCCCGGGGCACGCATCTTCTCCTTTGACG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGCGTCAAAGGAGAAGATaGGTGCCCCGGGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMRQRRR*VPRASA
Trigger: CGCTGAAGCCCGGGGCACGCATCTTCTCCTTTGACG...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGATGAAGTCAGCACCTaGTGGGGCGAGCACGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMDEVST*WGEHGF
Trigger: GAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTCATC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGAGCTGGGGGTCACAGTaGGCCTCTGAGCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSWGSQ*ASELGN
Trigger: GTTCCCAAGCTCAGAGGCGCACTGTGACCCCCAGCT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCAGCTGGGGGTCACAGTaGGCCTCTGAGCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFSWGSQ*ASELGN
Trigger: GTTCCCAAGCTCAGAGGCGCACTGTGACCCCCAGCT...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTCCTCACTGCCCTGTGTaGTGGCTACCGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFPHCPV*WLPHVL
Trigger: CAGGACATGCGGTAGCCAGCACACAGGGCAGTGAGG...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGCCTCACTGCCCTGTGTaGTGGCTACCGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMPHCPV*WLPHVL
Trigger: CAGGACATGCGGTAGCCAGCACACAGGGCAGTGAGG...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCCTGTCCATGGGCAGTaGACAGATGACAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEPVHGQ*TDDSPP
Trigger: GGGAGGGCTGTCATCTGTGCACTGCCCATGGACAGG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGTTGCACCTCGTGGCTaGTTTGTTCACCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFVAPRG*FVHPQG
Trigger: GCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTGTTGCACCTCGTGGCTaGTTTGTTCACCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFVAPRG*FVHPQG
Trigger: GCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGGTGCGTGTTGGCTGTaGTGTGGTCAGCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIGACWL*CGQPGA
Trigger: AGCGCCAGGCTGACCACAGCACAGCCAACACGCACC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CCCTGCCCACGGTGGGGGCTTCCTCCGAGCCGCCGGTCCTCTCCGGCCATCCGCAAGGTCACTTTTATTTaGCTGTCTGAATTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PCPRWGLPPSRRSSPAIRKVTFI*LSELAS
Trigger: TGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTT...GCGGATGGCCGGAGAGGACCGGCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGTATCTGCTGTGGGCTaGACAGGCAGGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLVSAVG*TGRGPW
Trigger: CCAGGGGCCCCTGCCTGTGCAGCCCACAGCAGATAC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGCCAGAAGCGTGAGATaGCCAGGTGGCCGCAGACTG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIARSVR*PGGRRL
Trigger: CAGTCTGCGGCCACCTGGGCATCTCACGCTTCTGGC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCTCCAACACGCATCCTaGAGGGCCTCGCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFLQHAS*RASQNW
Trigger: CCAGTTCTGCGAGGCCCTGCAGGATGCGTGTTGGAG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGAATCTTCCGTGCTGCTaGCTCCAGCCAAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVENLPCC*LQPRVA
Trigger: CGCCACCCTTGGCTGGAGGCAGCAGCACGGAAGATT...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGGTCCGGGGACAGTTTaGAACGCTGGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLGPGTV*NAGPAG
Trigger: TCCTGCAGGCCCAGCGTTGCAAACTGTCCCCGGACC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGATGTCCTGGGGCGCCTaGTTCACCCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMMSWGA*FTQAAF
Trigger: AAAGGCAGCCTGGGTGAAGCAGGCGCCCCAGGACAT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCTCTCCCTTTGGCCCCTaGGGCCCAGCAATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSISPFGP*GPAMPS
Trigger: AGAGGGCATTGCTGGGCCCCAGGGGCCAAAGGGAGA...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAAGGGCCCTGATTCCCTaGCAATCCTGGAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLRALIP*QSWRPG
Trigger: CCCGGGCCTCCAGGATTGCCAGGGAATCAGGGCCCT...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAAGGGCCCTGATTCCCTaGCAATCCTGGAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRRALIP*QSWRPG
Trigger: CCCGGGCCTCCAGGATTGCCAGGGAATCAGGGCCCT...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAGGCGCCCTTGGGTCCTaGAGGGCCCTGATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPGALGS*RALIPW
Trigger: CCAGGGAATCAGGGCCCTCCAGGACCCAAGGGCGCC...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGTGGCCCAGCATGGCCTaGCGTGTAGCCCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVWPSMA*RVAQSL
Trigger: GAGGCTCTGGGCTACACGCCAGGCCATGCTGGGCCA...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGGAACCTCGTGCACCTaGCCCAGCATGGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLGTSCT*PSMAWR
Trigger: ACGCCAGGCCATGCTGGGCCAGGTGCACGAGGTTCC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGTCCGGGCCTCCAGCTaGACCTTCCGGAACCCGTTC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLVRASS*TFRNPF
Trigger: GAACGGGTTCCGGAAGGTCCAGCTGGAGGCCCGGAC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGATTGTCCGTCCCTCGTaGGAGTGGTGTCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLIVRPS*EWCPGL
Trigger: GAGGCCCGGACACCACTCCCACGAGGGACGGACAAT...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAAAGTCGCGGTGGCTGTaGGCGGGTGGGCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRKSRWL*AGGLVG
Trigger: ACCCACAAGCCCACCCGCCCACAGCCACCGCGACTT...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAAGGTGGAGCACCGGCTaGAAGTCGCGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLRWSTG*KSRWLW
Trigger: CCACAGCCACCGCGACTTCCAGCCGGTGCTCCACCT...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGATGCCACACGCTCTTCTaGGGCCAGGTGGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRCHTLF*GQVGCL
Trigger: GAGGCACCCCACCTGGCCCCAGAAGAGCGTGTGGCA...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCACTATACAGGAAAGTATaGCAGCCAGGTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPLYRKV*QPGPGA
Trigger: GGCCCCAGGACCTGGCTGCCATACTTTCCTGTATAG...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCTGGAGGAGCCCAGATaGCCTTGTGCTGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFLEEPR*PCAECG
Trigger: GCCACACTCAGCACAAGGCCATCTGGGCTCCTCCAG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCCAGGCTGCTGTGCTTaGTGTTGGAGGACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIPGCCA*CWRTGR
Trigger: CCGGCCTGTCCTCCAACACCAAGCACAGCAGCCTGG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCTCCCATCTACCGCAGGGCGAGCACACACCCTGGAGGAGCCCAGATGGCCGGATGTATCATCTCATaGCTCATTTGGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPPIYRRASTHPGGAQMAGCIIS*LIWEAS
Trigger: GCTGGCCTCCCAAATGAGCCATGAGATGATACATCC...GGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCCCTGCGGTAGATGGGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCATGAGATGGGGGCCCTaGATGGGAGGCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIMRWGP*MGGCQT
Trigger: GGTCTGGCAGCCTCCCATCCAGGGCCCCCATCTCAT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGGCCGTGTTCCATCCTaGCGCTCAGCTGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEGRVPS*RSAGQV
Trigger: CACTTGTCCAGCTGAGCGCCAGGATGGAACACGGCC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTCACTGCCCTGTGTGCTaGCTACCGCATGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFHCPVC*LPHVLC
Trigger: GCACAGGACATGCGGTAGCCAGCACACAGGGCAGTG...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGTGCTGTGGTCAGCCTaGCGCTGCCCTGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIVLWSA*RCPEST
Trigger: AGTGGACTCAGGGCAGCGCCAGGCTGACCACAGCAC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGAGGCAGGTGCGTGTTaGCTGTGCTGTGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEEAGAC*LCCGQP
Trigger: AGGCTGACCACAGCACAGCCAACACGCACCTGCCTC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGGCTCTCGGCAGAAGTaGGGGTGTCCTGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFGSRQK*GCPGHL
Trigger: AAGATGGCCAGGACACCCCCACTTCTGCCGAGAGCC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAGGCAATGTTCTCCTCTaGCGCGTCCGGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRGNVLL*RVRALG
Trigger: GCCGAGAGCCCGGACGCGCCAGAGGAGAACATTGCC...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGAGTCCTTGGCTGTCTaGGTCCTGCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFESLAV*VLQASP
Trigger: TGGGGAAGCCTGCAGGACCCAGACAGCCAAGGACTC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCTCTCGTGGTGGAGGTaGTTGGGCAGCCAGAAGCGT +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFLSWWR*LGSQKR
Trigger: ACGCTTCTGGCTGCCCAACCACCTCCACCACGAGAG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCAGGCGAGGAAGGGGTaGCAGTGCGTCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVQARKG*QCVCSR
Trigger: CCTGCTGCAGACGCACTGCCACCCCTTCCTCGCCTG...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCATCGGGGTCATCCGTCTaGGTGACCTGCTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPSGSSV*VTCWGG
Trigger: CCCGCCCCAGCAGGTCACCCAGACGGATGACCCCGA...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGGTACCGGGCCACTTaGCCACTGTTGGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFWYRAT*PLLASG
Trigger: GCCAGATGCCAACAGTGGCCAAGTGGCCCGGTACCA...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTAAGAGGCTGGGGAAGTaGTACCGGGCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFKRLGK*YRATWP
Trigger: TGGCCAAGTGGCCCGGTACCACTTCCCCAGCCTCTT...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGAGCAGGGAGATGTCCTaGTGCCCGTCCTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLSREMS*CPSCTP
Trigger: TGGGGTGCAGGACGGGCACCAGGACATCTCCCTGCT...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGCGGCTGTGTGGGTCTaGCCTGCACCTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIAAVWV*PAPGSV
Trigger: CACAGAACCAGGTGCAGGCCAGACCCACACAGCCGC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGCTAAGTGTGTCCACTaGCCGACGAAGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLAKCVH*PTKAGS
Trigger: GCTCCCCGCCTTCGTCGGCCAGTGGACACACTTAGC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTCCCTGGGGGTCCTTGTaGTCCGGGGACAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFPWGSL*SGDSLQ
Trigger: TTGCAAACTGTCCCCGGACCACAAGGACCCCCAGGG...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCTCCCTTGTCGCCCTTaGGACCTACGTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSILPCRP*DLRPLE
Trigger: CTCCAGGGGACGTAGGTCCCAAGGGCGACAAGGGAG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCTCCCTTGTCGCCCTTaGGACCTACGTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLLPCRP*DLRPLE
Trigger: CTCCAGGGGACGTAGGTCCCAAGGGCGACAAGGGAG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGAGGCCCTTGGGGTCCTaGGGGCCCTCTCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVRPLGS*GPSLSN
Trigger: GTTGGAGAGAGAGGGCCCCCAGGACCCCAAGGGCCT...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAAAGGCCGGCGGGTCCTaGGACGTCGGAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRKAGGS*DVGAVH
Trigger: GTGAACAGCTCCGACGTCCCAGGACCCGCCGGCCTT...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCAGGTTGCACAGGGCATaGTACTGCACCCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFRLHRA*YCTLPD
Trigger: GTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCT...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTGTCACAGTGCGCCTCTaGGCTTGGGAACCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFVTVRL*AWEPAS
Trigger: TGAAGCAGGTTCCCAAGCTCAGAGGCGCACTGTGAC...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAAACTCATGGGTCCCTTaGATCTCCCAGCTTGGACTC +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPNSWVP*ISQLGL
Trigger: GAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATTGGACAAGTGCTGGCTaGGCCACGTCCCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDWTSAG*ATSQPG
Trigger: CCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCA...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCTAGGAGACAGCCAATaGCTGCCCTGCATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVELGDSQ*LPCIWS
Trigger: GCTCCAGATGCAGGGCAGTCATTGGCTGTCTCCTAG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGAGGGGTGGCTGTGACTaGCAGAGGACCTTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVERGGCD*QRTLLH
Trigger: GTGCAACAAGGTCCTCTGTCAGTCACAGCCACCCCT...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGTTTCGTCGCAGTCCTaGGGCAGGTGCGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLVSSQS*GRCVLA
Trigger: AGCCAACACGCACCTGCCTCAGGACTGCGACGAAAC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATAGATGGTGGTGGCACTaGGGGCCCCGTGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDRWWWH*GPREWC
Trigger: GCACCACTCACGGGGCCCTCAGTGCCACCACCATCT...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR TCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCTCCGGATGCCCCATCTaGGTCATCGCCTTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSISGCPI*VIAFLV
Trigger: GACGAGGAAGGCGATGACTCAGATGGGGCATCCGGA...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGAGCCAGGAAGTGTCTaGGCTCCTAACGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEEPGSV*APNEAT
Trigger: GGTGGCTTCGTTAGGAGCTCAGACACTTCCTGGCTC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACCAGAGCCTCACCCCTaGGGAGGCGCCCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTPEPHP*GGAHGS
Trigger: GGAACCATGGGCGCCTCCTCAGGGGTGAGGCTCTGG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTATTGGGGTCCGAGCCATaGCACACGCTCTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLLGSEP*HTLFWG
Trigger: GCCCCAGAAGAGCGTGTGGCATGGCTCGGACCCCAA...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGCTTCAGCCTGGGGTTaGTGTGGAGAATGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMASAWG*CGEWPR
Trigger: TCTGGGCCATTCTCCACAGCAACCCCAGGCTGAAGC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACCCTGGATGGGAGGCTaGCAGACCCCAACTCATGGG +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRPWMGG*QTPTHG
Trigger: CCCATGAGTTGGGGTCTGGCAGCCTCCCATCCAGGG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGCTCAGCTGGACAAGTaGTGGCTGAGCCACGTCCCA +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIAQLDK*WLSHVP
Trigger: TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAAGCAAGACCATGGCCTaGGCCGAGTCCGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLSKTMA*AESVMA
Trigger: CGCCATCACGGACTCGGCGCAGGCCATGGTCTTGCT...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATTCCTCGTCCAGGCAGTaGATGGGGCTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDSSSRQ*MGLTWG
Trigger: CCCCCAGGTGAGCCCCATGCACTGCCTGGACGAGGA...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCAATCTTCCGTGCTGCTaGCTCCAGCCAAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSINLPCC*LQPRVA
Trigger: CGCCACCCTTGGCTGGAGGCAGCAGCACGGAAGATT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGTGGAATCTTCCGTGCTaGTGCCTCCAGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEWNLPC*CLQPRV
Trigger: CACCCTTGGCTGGAGGCAGCAGCACGGAAGATTCCA...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTATTGCAACGCTGGGCCTaGAGGACCCAGGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLLQRWA*RTQGTH
Trigger: GTGAGTCCCCTGGGTCCTGCAGGCCCAGCGTTGCAA...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCTGCTTCACCCAGGCTaGCTTTCTGCCCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVELLHPG*LSAQSF
Trigger: GAAGGACTGGGCAGAAAGGCAGCCTGGGTGAAGCAG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTATCTCCCTTTGGCCCCTaGGGCCCAGCAATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLSPFGP*GPAMPS
Trigger: AGAGGGCATTGCTGGGCCCCAGGGGCCAAAGGGAGA...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAAGCCCAGGTTGCCCTTaGGTCCTGCAGGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLSPGCP*VLQVRE
Trigger: TTCCCGGACCTGCAGGACCCAAGGGCAACCTGGGCT...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGGATGCTCTCTCCCTTaGGACCTGGAATCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFGCSLP*DLESQG
Trigger: ACCCTGGGATTCCAGGTCCCAAGGGAGAGAGCATCC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATGTCCGGGCCTCCAGCTaGACCTTCCGGAACCCGTTC +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDVRASS*TFRNPF
Trigger: GAACGGGTTCCGGAAGGTCCAGCTGGAGGCCCGGAC...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGTCTTCTGGGGCCAGGTaGGGTGCCTCAGGACGTCCT +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVSSGAR*GASGRP
Trigger: AGGACGTCCTGAGGCACCCCACCTGGCCCCAGAAGA...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCATCAGCCTGCGCCCGTTaGGGTCCGAGCCATGCCACA +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPSACAR*GPSHAT
Trigger: TGTGGCATGGCTCGGACCCCAACGGGCGCAGGCTGA...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAGGCGAGCACACACCCTaGAGGAGCCCAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRGEHTP*RSPDGL
Trigger: AAGGCCATCTGGGCTCCTCCAGGGTGTGTGCTCGCC...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATAGGACAGGCCGGAGCTaGGGGTCACAGTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDRTGRS*GSQCAS
Trigger: AGAGGCGCACTGTGACCCCCAGCTCCGGCCTGTCCT...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGTGCTGTGCTTGGTGTTaGAGGACAGGCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLCCAWC*RTGRSW
Trigger: CCAGCTCCGGCCTGTCCTCCAACACCAAGCACAGCA...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACCAGGCTGCTGTGCTTaGTGTTGGAGGACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRPGCCA*CWRTGR
Trigger: CCGGCCTGTCCTCCAACACCAAGCACAGCAGCCTGG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCCAGGCTGCTGTGCTTaGTGTTGGAGGACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVPGCCA*CWRTGR
Trigger: CCGGCCTGTCCTCCAACACCAAGCACAGCAGCCTGG...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCTGGACTCGGCCAGGGTaGAGCTGTCTGCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFWTRPG*SCLLWM
Trigger: CATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCA...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATGATGGGGGCCCTGGATaGGAGGCTGCCAGACCCCAA +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDDGGPG*EAARPQ
Trigger: TTGGGGTCTGGCAGCCTCCCATCCAGGGCCCCCATC...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCACTGCCCTGTGTGCTaGCTACCGCATGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLHCPVC*LPHVLC
Trigger: GCACAGGACATGCGGTAGCCAGCACACAGGGCAGTG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCACTGCCCTGTGTGCTaGCTACCGCATGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIHCPVC*LPHVLC
Trigger: GCACAGGACATGCGGTAGCCAGCACACAGGGCAGTG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGGTGCTGTGGTCAGCCTaGCGCTGCCCTGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVVLWSA*RCPEST
Trigger: AGTGGACTCAGGGCAGCGCCAGGCTGACCACAGCAC...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGGGTCACGTGTGTGGTaGTATCTGCTGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEGSRVW*YLLWAA
Trigger: TGCAGCCCACAGCAGATACCACCACACACGTGACCC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCCAGCCTCGGTTGTGTaGGCGCCCGGAGAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDPASVV*APGELG
Trigger: TCCTAGCTCTCCGGGCGCCCACACAACCGAGGCTGG...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGCCACTGTTGGCATCTaGCCCAAAGACGTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFATVGI*PKDVGQ
Trigger: CTGGCCTACGTCTTTGGGCCAGATGCCAACAGTGGC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGGTCTGGCCTGCACCTaGTTCTGTGTAGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFGLACT*FCVEQG
Trigger: TCCCTGCTCTACACAGAACCAGGTGCAGGCCAGACC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAGCTAAGTGTGTCCACTaGCCGACGAAGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRAKCVH*PTKAGS
Trigger: GCTCCCCGCCTTCGTCGGCCAGTGGACACACTTAGC...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTCAGCGATCACCCCCTaGAACTTGTCAGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMSAITP*NLSGSA
Trigger: AGCGGACCCTGACAAGTTCCAGGGGGTGATCGCTGA...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCACTAACGAAGCCACCGTaGTCTGCTCCTCGACTTCTT +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPLTKPP*SAPRLL
Trigger: AAGAAGTCGAGGAGCAGACCACGGTGGCTTCGTTAG...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATTCTGAAGGAGGGTCCTaGGGGCCCTGGAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDSEGGS*GPWRPL
Trigger: CAAGGGCCTCCAGGGCCCCCAGGACCCTCCTTCAGA...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGGCTCCCCTTATGTCCTaGGGCGCCTGCTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVAPLMS*GACFTQ
Trigger: CTGGGTGAAGCAGGCGCCCCAGGACATAAGGGGAGC...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGCCCCGCATGCCGCCTaGCAGGGGGCTGTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRAPHAA*QGAVER
Trigger: GCGCTCAACAGCCCCCTGTCAGGCGGCATGCGGGGC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTGAGAGTTGGGGCAGGTaGATGTCAGCATCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFESWGR*MSASGF
Trigger: GAAGCCTGATGCTGACATTCACCTGCCCCAACTCTC...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGAGAGTTGGGGCAGGTaGATGTCAGCATCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFESWGR*MSASGF
Trigger: GAAGCCTGATGCTGACATTCACCTGCCCCAACTCTC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCAGGTTGCACAGGGCATaGTACTGCACCCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIRLHRA*YCTLPD
Trigger: GTCAGGCAGGGTGCAGTATCATGCCCTGTGCAACCT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACAGATGGCCTTGTGCTaGGTGTGGCCTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRQMALC*VWPQLP
Trigger: TGGGAGCTGAGGCCACACTCAGCACAAGGCCATCTG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATAGAATGGCCCAGAGCTaGGCAGAAGGGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDRMAQS*AEGAPP
Trigger: AGGGGGAGCCCCTTCTGCTCAGCTCTGGGCCATTCT...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCAGCCTCAGCCTCTTTaGTGTGGCCGTGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLQPQPL*CGRVPS
Trigger: GGATGGAACACGGCCACATCAAAGAGGCTGAGGCTG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTCTCAGGGGTGGCTGTaGCTGACAGAGGACCTTGTT +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFSQGWL*LTEDLV
Trigger: AACAAGGTCCTCTGTCAGTCACAGCCACCCCTGAGA...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTATCCGGATGCCCCATCTaGGTCATCGCCTTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLSGCPI*VIAFLV
Trigger: GACGAGGAAGGCGATGACTCAGATGGGGCATCCGGA...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCGCCCGTCTCCTCCCTaGGAAGCTCCCGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRRPSPP*EAPGRP
Trigger: GGGACGCCCGGGAGCTTCTCAGGGAGGAGACGGGCG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACAGCAATGCCCTCTCTaGCAGGGAGGCCGGGGAACC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTQQCPL*QGGRGT
Trigger: GGTTCCCCGGCCTCCCTGGCAGAGAGGGCATTGCTG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCGGGCATTCCCCTCATaGCAAATCCAAGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFRAFPS*QIQGWH
Trigger: ATGCCAGCCTTGGATTTGGCATGAGGGGAATGCCCG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCACTCAGCAAACACATTaGTGTCGTAAACAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPTQQTH*CRKQES
Trigger: GGACTCCTGTTTACGACAGCAATGTGTTTGCTGAGT...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCCTGAGCTTGGGAACCTaGTTCAGCCTGGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSILSLGT*FSLGLL
Trigger: CAGCAACCCCAGGCTGAAGCAGGTTCCCAAGCTCAG...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCTGAGCTTGGGAACCTaGTTCAGCCTGGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLLSLGT*FSLGLL
Trigger: CAGCAACCCCAGGCTGAAGCAGGTTCCCAAGCTCAG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGAGCTGGGGGTCACAGTaGGCCTCTGAGCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVSWGSQ*ASELGN
Trigger: GTTCCCAAGCTCAGAGGCGCACTGTGACCCCCAGCT...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGAGCCCCAGGCTGCTGTaGTTGGTGTTGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVSPRLL*LVLEDR
Trigger: CCTGTCCTCCAACACCAAGCACAGCAGCCTGGGGCT...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAGCTCAGCTGGACAAGTaGTGGCTGAGCCACGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRAQLDK*WLSHVP
Trigger: TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGC...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCCTGTCCATGGGCAGTaGACAGATGACAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVPVHGQ*TDDSPP
Trigger: GGGAGGGCTGTCATCTGTGCACTGCCCATGGACAGG...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTACCTGTCCATGGGCAGTaGACAGATGACAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLPVHGQ*TDDSPP
Trigger: GGGAGGGCTGTCATCTGTGCACTGCCCATGGACAGG...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGTGTGGGTCTGGCCTaGACCTGGTTCTGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMCVGLA*TWFCVE
Trigger: CTCTACACAGAACCAGGTGCAGGCCAGACCCACACA...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATTCACCTGGGGGTCCCTaGGCACCTTCAGCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDSPGGP*APSAQR
Trigger: TCGCTGAGCTGAAGGTGCGCAGGGACCCCCAGGTGA...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCTGGAATCTTCCGTGCTaGTGCCTCCAGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIWNLPC*CLQPRV
Trigger: CACCCTTGGCTGGAGGCAGCAGCACGGAAGATTCCA...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCATTGCAACGCTGGGCCTaGAGGACCCAGGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPLQRWA*RTQGTH
Trigger: GTGAGTCCCCTGGGTCCTGCAGGCCCAGCGTTGCAA...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAATGTCCTGGGGCGCCTaGTTCACCCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRMSWGA*FTQAAF
Trigger: AAAGGCAGCCTGGGTGAAGCAGGCGCCCCAGGACAT...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAGGTCCGGGGGCTCCTaGCAGGCCGCTCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRRSGGS*QAALPT
Trigger: CGTGGGGAGAGCGGCCTGGCAGGAGCCCCCGGACCT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACCCGGGGACTCCATCTaGTCCAACTTCTCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRPGDSI*SNFSLR
Trigger: GCGAAGGGAGAAGTTGGAGCAGATGGAGTCCCCGGG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCTCCTTTGGCGCCCTTaGGTCCTGGAGGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDLLWRP*VLEGPD
Trigger: ATCAGGGCCCTCCAGGACCCAAGGGCGCCAAAGGAG...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACTCTCCCTTGGGACCTaGAATCCCAGGGTAGCCACG +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRLSLGT*NPRVAT
Trigger: CGTGGCTACCCTGGGATTCCAGGTCCCAAGGGAGAG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGGATGCTCTCTCCCTTaGGACCTGGAATCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIGCSLP*DLESQG
Trigger: ACCCTGGGATTCCAGGTCCCAAGGGAGAGAGCATCC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAATTGTCCGTCCCTCGTaGGAGTGGTGTCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPIVRPS*EWCPGL
Trigger: GAGGCCCGGACACCACTCCCACGAGGGACGGACAAT...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCATCTTCTGGGGCCAGGTaGGGTGCCTCAGGACGTCCT +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPSSGAR*GASGRP
Trigger: AGGACGTCCTGAGGCACCCCACCTGGCCCCAGAAGA...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCTCCGCATCCAGGCGGTaGCTACTTGGAGGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSISASRR*LLGGSH
Trigger: ATGACTGCCTCCAAGTAGCCACCGCCTGGATGCGGA...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGCTATACAGGAAAGTATaGCAGCCAGGTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVELYRKV*QPGPGA
Trigger: GGCCCCAGGACCTGGCTGCCATACTTTCCTGTATAG...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGCTATACAGGAAAGTATaGCAGCCAGGTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMLYRKV*QPGPGA
Trigger: GGCCCCAGGACCTGGCTGCCATACTTTCCTGTATAG...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTACTGGAGGAGCCCAGATaGCCTTGTGCTGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLLEEPR*PCAECG
Trigger: GCCACACTCAGCACAAGGCCATCTGGGCTCCTCCAG...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGGGTTGCTGTGGAGAATaGCCCAGAGCTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMGCCGE*PRAEQK
Trigger: CTTCTGCTCAGCTCTGGGCCATTCTCCACAGCAACC...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGTGCTGTGCTTGGTGTTaGAGGACAGGCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVCCAWC*RTGRSW
Trigger: CCAGCTCCGGCCTGTCCTCCAACACCAAGCACAGCA...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCATCTCATGGCTCATTTaGGAGGCCAGCCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIISWLI*EASPRL
Trigger: CAGCCTGGGGCTGGCCTCCCAAATGAGCCATGAGAT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCTCAGCCTCTTTGATGTaGCCGTGTTCCATCCTGGCG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFSASLM*PCSILA
Trigger: CGCCAGGATGGAACACGGCCACATCAAAGAGGCTGA...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATGTGCTGTGGTCAGCCTaGCGCTGCCCTGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDVLWSA*RCPEST
Trigger: AGTGGACTCAGGGCAGCGCCAGGCTGACCACAGCAC...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAGCCAGGGGCTGTCGCTaGCTCTGTGGAACCATTCCG +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPARGCR*LCGTIP
Trigger: CGGAATGGTTCCACAGAGCCAGCGACAGCCCCTGGC...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGAAGTGGGGGTGTCCTaGCCATCTTCCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLEVGVS*PSSSSS
Trigger: AGAGCTGCTGGAAGATGGCCAGGACACCCCCACTTC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATGTGGTCCCATTCTCCTaGGGGGTGCTGGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDVVPFS*GVLEGP
Trigger: TGGGCCTTCCAGCACCCCCCAGGAGAATGGGACCAC...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACAGGGAGGGAGGCGATaGGGTGGGTGCAGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTQGGRR*GGCRQG
Trigger: ACCTTGCCTGCACCCACCCCATCGCCTCCCTCCCTG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCACAGAGTTAGCCACGTaGGAGACCCAAGCACCGCTG +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSITELAT*ETQAPL
Trigger: CAGCGGTGCTTGGGTCTCCCACGTGGCTAACTCTGT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGCCACTTGGCCACTGTTaGCATCTGGCCCAAAGACGT +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMPLGHC*HLAQRR
Trigger: ACGTCTTTGGGCCAGATGCCAACAGTGGCCAAGTGG...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGGTCTGGCCTGCACCTaGTTCTGTGTAGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIGLACT*FCVEQG
Trigger: TCCCTGCTCTACACAGAACCAGGTGCAGGCCAGACC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCTCAGCGATCACCCCCTaGAACTTGTCAGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSISAITP*NLSGSA
Trigger: AGCGGACCCTGACAAGTTCCAGGGGGTGATCGCTGA...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGACCTACGTCCCCTaGAGTCCCGGGGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTGTYVP*SPGEAL
Trigger: CAAGGCTTCCCCGGGACTCCAGGGGACGTAGGTCCC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTGGACAAGTGCTGGCTGAGCCACGTCCCAGCCAGGGGCATGAGATGGGGGCCCATTTCAGCCTCCAACTaGAGAAAGTCAAACGGAAAC +
Preference number: 4 (lower is better)
Translates to: LDKCWLSHVPARGMRWGPISASN*RKSNGN
Trigger: GTTTCCGTTTGACTTTCTTCAGTTGGAGGCTGAAAT...GGGCCCCCATCTCATGCCCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAACTTGGAGGCAGTCATaGAGCTGTTCTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPTWRQS*SCSQCR
Trigger: TCTGCATTGAGAACAGCTTCATGACTGCCTCCAAGT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAAGAATGGCCCAGAGCTaGGCAGAAGGGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTRMAQS*AEGAPP
Trigger: AGGGGGAGCCCCTTCTGCTCAGCTCTGGGCCATTCT...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAGTTTCGTCGCAGTCCTaGGGCAGGTGCGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPVSSQS*GRCVLA
Trigger: AGCCAACACGCACCTGCCTCAGGACTGCGACGAAAC...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACTGAGCTTGGGAACCTaGTTCAGCCTGGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRLSLGT*FSLGLL
Trigger: CAGCAACCCCAGGCTGAAGCAGGTTCCCAAGCTCAG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAAGGCCAGCCCCAGGCTaGTGTGCTTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTRPAPG*CAWCWR
Trigger: CCTCCAACACCAAGCACAGCAGCCTGGGGCTGGCCT...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCACCTCACTGCCCTGTGTaGTGGCTACCGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPPHCPV*WLPHVL
Trigger: CAGGACATGCGGTAGCCAGCACACAGGGCAGTGAGG...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCACCTGTCCATGGGCAGTaGACAGATGACAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPPVHGQ*TDDSPP
Trigger: GGGAGGGCTGTCATCTGTGCACTGCCCATGGACAGG...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GTGGCCTCAGCTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTAGGGATCGTGGTAGCTaGATGGCTGGTGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: VASAPIASRGLSANRSGFRDRGS*MAGVLI
Trigger: AATGAGGACACCAGCCATGCAGCTACCACGATCCCT...AAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAGCTGAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGAAGCCACCGTGGTCTaGTCCTCGACTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFEATVV*SSTSSL
Trigger: AAGTGAAGAAGTCGAGGAGCAGACCACGGTGGCTTC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGAAGCCACCGTGGTCTaGTCCTCGACTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEEATVV*SSTSSL
Trigger: AAGTGAAGAAGTCGAGGAGCAGACCACGGTGGCTTC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAAGCCCAGGTTGCCCTTaGGTCCTGCAGGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTSPGCP*VLQVRE
Trigger: TTCCCGGACCTGCAGGACCCAAGGGCAACCTGGGCT...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACACCCTTCTCACCCTTaGGTCCCGGGGAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTHPSHP*VPGSLV
Trigger: AACGAGGCTCCCCGGGACCCAAGGGTGAGAAGGGTG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTATGCCAAATCCAAGGCTaGCATCTCCCGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLCQIQG*HLPAPL
Trigger: AAGGGGAGCCGGGAGATGCCAGCCTTGGATTTGGCA...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCACTCTCCCTTGGGACCTaGAATCCCAGGGTAGCCACG +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPLSLGT*NPRVAT
Trigger: CGTGGCTACCCTGGGATTCCAGGTCCCAAGGGAGAG...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGGATGCTCTCTCCCTTaGGACCTGGAATCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLGCSLP*DLESQG
Trigger: ACCCTGGGATTCCAGGTCCCAAGGGAGAGAGCATCC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTATGGACTCGGCCAGGGTaGAGCTGTCTGCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLWTRPG*SCLLWM
Trigger: CATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCA...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAGGCCGTGTTCCATCCTaGCGCTCAGCTGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPGRVPS*RSAGQV
Trigger: CACTTGTCCAGCTGAGCGCCAGGATGGAACACGGCC...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAGAGGCAGGTGCGTGTTaGCTGTGCTGTGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPEAGAC*LCCGQP
Trigger: AGGCTGACCACAGCACAGCCAACACGCACCTGCCTC...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGAAGTGGGGGTGTCCTaGCCATCTTCCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLEVGVS*PSSSSS
Trigger: AGAGCTGCTGGAAGATGGCCAGGACACCCCCACTTC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGTGTCATTCCACAGCTaGACGAAGCTCCGGATGCCT +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLVSFHS*TKLRMP
Trigger: AGGCATCCGGAGCTTCGTCCAGCTGTGGAATGACAC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACCAGGGTTTCCGCCCTaGCCAAGCTCTCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTPGFPP*PSSQWG
Trigger: TCCCCACTGAGAGCTTGGCCAGGGCGGAAACCCTGG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGCCACTGTTGGCATCTaGCCCAAAGACGTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLATVGI*PKDVGQ
Trigger: CTGGCCTACGTCTTTGGGCCAGATGCCAACAGTGGC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCACACGGAAGAAGAGGCTaGGGAAGTGGTACCGGGCCA +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPHGRRG*GSGTGP
Trigger: TGGCCCGGTACCACTTCCCCAGCCTCTTCTTCCGTG...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGGTGGCTGGCCGGATGTaGAACAGCAGTGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLVAGRM*NSSEKS
Trigger: TGACTTCTCACTGCTGTTCCACATCCGGCCAGCCAC...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTACCCAGGGGACTCACTaGGCACGGGAGACCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRTQGTH*ARETRG
Trigger: CCCCCGGGTCTCCCGTGCCCAGTGAGTCCCCTGGGT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGACAGTTTGCAACGCTaGGCCTGCAGGACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTDSLQR*ACRTQG
Trigger: CCCCTGGGTCCTGCAGGCCCAGCGTTGCAAACTGTC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
3UTR CAA 72 bp CAGACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTaGGACTCGGCCAGGGTGGAGCTGTCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: QTPTHGSLESPS*DSARVELSALD
Trigger: ATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACTGCAGCCGGCCCAATaGGCACACAGTACCCATCCT +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTLQPAQ*AHSTHP
Trigger: AGGATGGGTACTGTGTGCTCATTGGGCCGGCTGCAG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR TCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCGATGTGGAACAGCAGTaGGAAGTCACGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFDVEQQ*EVTEEE
Trigger: CTCTTCTTCCGTGACTTCTCACTGCTGTTCCACATC...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCAGCTCCAGGCCCCGTaGGGACCGAGCAAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRQLQAP*GPSKRH
Trigger: ATGCCGCTTGCTCGGTCCTCACGGGGCCTGGAGCTG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAGGTCCGGGAAAGCCTaGGAAACCCGGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRRSGKA*ETRPAL
Trigger: GAGGGCCGGCCGGGTTTCGCAGGCTTTCCCGGACCT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGCCTCAGGACGTCCTTaGCGTCAAAGGAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLASGRP*RQRRRC
Trigger: GCATCTTCTCCTTTGACGGCAAGGACGTCCTGAGGC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGGCCTCAGGACGTCCTTaGCGTCAAAGGAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVASGRP*RQRRRC
Trigger: GCATCTTCTCCTTTGACGGCAAGGACGTCCTGAGGC...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCACATGATACTGCACCCTaGCTGACCCAGCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPHDTAP*LTQLGS
Trigger: TGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATG...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGATGAAGTCAGCACCTaGTGGGGCGAGCACGGCTTC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTDEVST*WGEHGF
Trigger: GAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTCATC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAGAGACAGCCAATGACTaGCCTGCATCTGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPETAND*PASGAS
Trigger: GCTGGCTCCAGATGCAGGGCAGTCATTGGCTGTCTC...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCGACAGAGGACCTTGTTaGACCTCGTGGCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIDRGPC*TSWLLC
Trigger: ACAAAGCAGCCACGAGGTGCAACAAGGTCCTCTGTC...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGCTCCCTGCCCACGGTaGGGGCTTCCTCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPAPCPR*GLPPSR
Trigger: GCGGCTCGGAGGAAGCCCCCACCGTGGGCAGGGAGC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAGGAGAAATCGAGCCGTaGTCTGATCAGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRGEIEP*SDQAKR
Trigger: CCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCC...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGGTTGCTGTGGAGAATaGCCCAGAGCTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLGCCGE*PRAEQK
Trigger: CTTCTGCTCAGCTCTGGGCCATTCTCCACAGCAACC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGGGATGTATCATCTCATaGCTCATTTGGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEGCIIS*LIWEAS
Trigger: GCTGGCCTCCCAAATGAGCCATGAGATGATACATCC...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATTGGACTCGGCCAGGGTaGAGCTGTCTGCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDWTRPG*SCLLWM
Trigger: CATCCAAAGCAGACAGCTCCACCCTGGCCGAGTCCA...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCATTGAATCTCCCAGCTTaGACTCGGCCAGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPLNLPA*TRPGWS
Trigger: GCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAA...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGCCAGGGGCATGAGATaGGGGCCCTGGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRARGMR*GPWMGG
Trigger: GCCTCCCATCCAGGGCCCCCATCTCATGCCCCTGGC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACATGGTACCGGGCCACTTaGCCACTGTTGGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTWYRAT*PLLASG
Trigger: GCCAGATGCCAACAGTGGCCAAGTGGCCCGGTACCA...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTCACCCCAAAGCGGCCTaGCTCGCCGGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPHPKAA*LAGQAW
Trigger: CCAGGCCTGCCCGGCGAGCCAGGCCGCTTTGGGGTG...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGTCACAGTGCGCCTCTaGGCTTGGGAACCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTVTVRL*AWEPAS
Trigger: TGAAGCAGGTTCCCAAGCTCAGAGGCGCACTGTGAC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACTAGGAGACAGCCAATaGCTGCCCTGCATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTLGDSQ*LPCIWS
Trigger: GCTCCAGATGCAGGGCAGTCATTGGCTGTCTCCTAG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAAGGGGTGGCTGTGACTaGCAGAGGACCTTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTRGGCD*QRTLLH
Trigger: GTGCAACAAGGTCCTCTGTCAGTCACAGCCACCCCT...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATACGAATGACTCGGGTTaGTGTTGCCGGATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDTNDSG*CCRISG
Trigger: CCCTGAGATCCGGCAACATCAACCCGAGTCATTCGT...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCACCTCCACAGAACGAATaGCTCGGGTTGATGTTGCCG +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPPPQNE*LGLMLP
Trigger: CGGCAACATCAACCCGAGTCATTCGTTCTGTGGAGG...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCAGCAATGCCCTCTCTaGCAGGGAGGCCGGGGAACC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRQQCPL*QGGRGT
Trigger: GGTTCCCCGGCCTCCCTGGCAGAGAGGGCATTGCTG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCGGGCATTCCCCTCATaGCAAATCCAAGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDRAFPS*QIQGWH
Trigger: ATGCCAGCCTTGGATTTGGCATGAGGGGAATGCCCG...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGTTCGCCTTTCTGTCCTaGATCACCTCGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVFAFLS*ITSVSL
Trigger: AAGGGAGACCGAGGTGATGCAGGACAGAAAGGCGAA...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGATTCGCCTTTCTGTCCTaGATCACCTCGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRFAFLS*ITSVSL
Trigger: AAGGGAGACCGAGGTGATGCAGGACAGAAAGGCGAA...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTCGCGGATGCCCCGCATaGCGCCTGACAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPRGCPA*RLTGGC
Trigger: ACAGCCCCCTGTCAGGCGGCATGCGGGGCATCCGCG...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTAGTCGGCCCCGCGGATaGCCCGCATGCCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPSRPRG*PACRLT
Trigger: TGTCAGGCGGCATGCGGGGCATCCGCGGGGCCGACT...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATGCCTCAGGACGTCCTTaGCGTCAAAGGAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDASGRP*RQRRRC
Trigger: GCATCTTCTCCTTTGACGGCAAGGACGTCCTGAGGC...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCAGGGTGGAGCTGTCTaGTTTGGATGTATCATCTCA +
Preference number: 4 (lower is better)
Translates to: AGYRMSCASLSLFDVAVFQGGAV*FGCIIS
Trigger: TGAGATGATACATCCAAAGCAGACAGCTCCACCCTG...GAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGGACAGAGGACCTTGTTaGACCTCGTGGCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVDRGPC*TSWLLC
Trigger: ACAAAGCAGCCACGAGGTGCAACAAGGTCCTCTGTC...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGTGTGTGGTGGTATCTaGTGTGGGCTGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTVCGGI*CGLHRQ
Trigger: CTGCCTGTGCAGCCCACAGCAGATACCACCACACAC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR GCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGGACGAAGCTCCGGATaGCTTTGGCCACGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTGRSSG*LWPRSG
Trigger: TCCTGAACGTGGCCAAAGGCATCCGGAGCTTCGTCC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAGCCCGGCTCTCCCTTaGCTCCTTTCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRSPALP*LLSGQG
Trigger: GCCCTGCCCAGAAAGGAGCCAAGGGAGAGCCGGGCT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAAGTCGCGGTGGCTGTaGGCGGGTGGGCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRKSRWL*AGGLVG
Trigger: ACCCACAAGCCCACCCGCCCACAGCCACCGCGACTT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAGGTGGAGCACCGGCTaGAAGTCGCGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRRWSTG*KSRWLW
Trigger: CCACAGCCACCGCGACTTCCAGCCGGTGCTCCACCT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGCCTGCTGGAAGCACTaGAAGTCGGCCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRACWKH*KSAPRM
Trigger: CATCCGCGGGGCCGACTTCCAGTGCTTCCAGCAGGC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGATGGGGGCCCTGGATaGGAGGCTGCCAGACCCCAA +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRDGGPG*EAARPQ
Trigger: TTGGGGTCTGGCAGCCTCCCATCCAGGGCCCCCATC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGATCGTGGTAGCTGCATaGCTGGTGTCCTCATTATTG +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMIVVAA*LVSSLL
Trigger: CAATAATGAGGACACCAGCCATGCAGCTACCACGAT...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGTGGCCAAGCTCTCAGTaGGGACAGTGTCATTCCACA +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVWPSSQ*GQCHST
Trigger: TGTGGAATGACACTGTCCCCACTGAGAGCTTGGCCA...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGCCACTGTTGGCATCTaGCCCAAAGACGTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTATVGI*PKDVGQ
Trigger: CTGGCCTACGTCTTTGGGCCAGATGCCAACAGTGGC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTTGCATGGGGCTCACCTaGGGGTCCCTGCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRCMGLT*GSLRTF
Trigger: GAAGGTGCGCAGGGACCCCCAGGTGAGCCCCATGCA...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGCGACTTCTTCACTTCTaGAATCTTCCGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLRLLHF*NLPCCC
Trigger: GCAGCAGCACGGAAGATTCCAGAAGTGAAGAAGTCG...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTAACGAAGCCACCGTaGTCTGCTCCTCGACTTCTT +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVLTKPP*SAPRLL
Trigger: AAGAAGTCGAGGAGCAGACCACGGTGGCTTCGTTAG...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATAACTCATGGGTCCCTTaGATCTCCCAGCTTGGACTC +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDNSWVP*ISQLGL
Trigger: GAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTT...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAACGAATGACTCGGGTTaGTGTTGCCGGATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTTNDSG*CCRISG
Trigger: CCCTGAGATCCGGCAACATCAACCCGAGTCATTCGT...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGACGATGGGCACGGCTaGGCGGTCGGCACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHDDGHG*AVGTAH
Trigger: GTGCGCCGTGCCGACCGCGCAGCCGTGCCCATCGTC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTTTGGGGTCCGAGCCATaGCACACGCTCTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRLGSEP*HTLFWG
Trigger: GCCCCAGAAGAGCGTGTGGCATGGCTCGGACCCCAA...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAGACAGAGGACCTTGTTaGACCTCGTGGCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPDRGPC*TSWLLC
Trigger: ACAAAGCAGCCACGAGGTGCAACAAGGTCCTCTGTC...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACATGTGTGGGTCTGGCCTaGACCTGGTTCTGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTCVGLA*TWFCVE
Trigger: CTCTACACAGAACCAGGTGCAGGCCAGACCCACACA...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGGGCCCTGGAGGTCCTaGGGGGCCGGGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHGPWRS*GAGHSP
Trigger: AGGGGAATGCCCGGCCCCCCAGGACCTCCAGGGCCC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGGCGCCCTTGGGTCCTaGAGGGCCCTGATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPGALGS*RALIPW
Trigger: CCAGGGAATCAGGGCCCTCCAGGACCCAAGGGCGCC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTTCTTCTGGGGCCAGGTaGGGTGCCTCAGGACGTCCT +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRSSGAR*GASGRP
Trigger: AGGACGTCCTGAGGCACCCCACCTGGCCCCAGAAGA...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTCCCATTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGACAAAGCAGGAAATCCTaGAGAAATCGAGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LPLPHGACLLTGLGFVHRQSRKS*RNRAVV
Trigger: GACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTG...TCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTAGGATGTATCATCTCATaGCTCATTTGGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLGCIIS*LIWEAS
Trigger: GCTGGCCTCCCAAATGAGCCATGAGATGATACATCC...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGCCAGGGGCATGAGATaGGGGCCCTGGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPARGMR*GPWMGG
Trigger: GCCTCCCATCCAGGGCCCCCATCTCATGCCCCTGGC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCAGCTGGACAAGTGCTaGCTGAGCCACGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRQLDKC*LSHVPA
Trigger: GGCTGGGACGTGGCTCAGCCAGCACTTGTCCAGCTG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCATGGCCAAGCTCTCAGTaGGGACAGTGTCATTCCACA +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPWPSSQ*GQCHST
Trigger: TGTGGAATGACACTGTCCCCACTGAGAGCTTGGCCA...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGCGGCTGTGTGGGTCTaGCCTGCACCTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRAAVWV*PAPGSV
Trigger: CACAGAACCAGGTGCAGGCCAGACCCACACAGCCGC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGCTAAGTGTGTCCACTaGCCGACGAAGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRAKCVH*PTKAGS
Trigger: GCTCCCCGCCTTCGTCGGCCAGTGGACACACTTAGC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGACAGTTTGCAACGCTaGGCCTGCAGGACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRDSLQR*ACRTQG
Trigger: CCCCTGGGTCCTGCAGGCCCAGCGTTGCAAACTGTC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGCTCGGCCACGAAGATaGGCCAGCCCTCGGGAACCT +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPARPRR*ASPREP
Trigger: AGGTTCCCGAGGGCTGGCTCATCTTCGTGGCCGAGC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGACTTGGAGGCAGTCATaGAGCTGTTCTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVTWRQS*SCSQCR
Trigger: TCTGCATTGAGAACAGCTTCATGACTGCCTCCAAGT...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCATTCTTGAGGATTACATaGAACGTGAACTATACAGGA +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPFLRIT*NVNYTG
Trigger: TCCTGTATAGTTCACGTTTCATGTAATCCTCAAGAA...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAGATGTGGAACAGCAGTaGGAAGTCACGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPDVEQQ*EVTEEE
Trigger: CTCTTCTTCCGTGACTTCTCACTGCTGTTCCACATC...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCACTCAGCAAACACATTaGTGTCGTAAACAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSITQQTH*CRKQES
Trigger: GGACTCCTGTTTACGACAGCAATGTGTTTGCTGAGT...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCGCGGATGCCCCGCATaGCGCCTGACAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHRGCPA*RLTGGC
Trigger: ACAGCCCCCTGTCAGGCGGCATGCGGGGCATCCGCG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CGAGCACGGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATATCAGGCCAAGAGGTTaGACAGGGCATGATACTGCA +
Preference number: 4 (lower is better)
Translates to: RARLPKAGNPGEIEPWSDIRPRG*TGHDTA
Trigger: TGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGAT...ATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCCGTGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GGCTTCCCAAAGCAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAATCAGGCCAAGAGGTTaGACAGGGCATGATACTGCA +
Preference number: 4 (lower is better)
Translates to: GFPKQEILEKSSRGLIRPIRPRG*TGHDTA
Trigger: TGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGAT...TGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTGGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGTTGCACCTCGTGGCTaGTTTGTTCACCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRVAPRG*FVHPQG
Trigger: GCCCTGCGGGTGAACAAAGCAGCCACGAGGTGCAAC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp GCCGTGTTCCATCCTGGCGCTCAGCTGGACAAGTGCTGGCTGAGCCACGTCCCAAAGGTCACTTTTATTTaGCTGTCTGAATTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AVFHPGAQLDKCWLSHVPKVTFI*LSELAS
Trigger: TGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTT...TGGGACGTGGCTCAGCCAGCACTTGTCCAGCTGAGCGCCAGGATGGAACACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTATGTCCTGGGGCGCCTaGTTCACCCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRMSWGA*FTQAAF
Trigger: AAAGGCAGCCTGGGTGAAGCAGGCGCCCCAGGACAT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGCCTGCTGGAAGCACTaGAAGTCGGCCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPACWKH*KSAPRM
Trigger: CATCCGCGGGGCCGACTTCCAGTGCTTCCAGCAGGC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTTCAGCCTGCGCCCGTTaGGGTCCGAGCCATGCCACA +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPSACAR*GPSHAT
Trigger: TGTGGCATGGCTCGGACCCCAACGGGCGCAGGCTGA...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTAGGACAGGCCGGAGCTaGGGGTCACAGTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPRTGRS*GSQCAS
Trigger: AGAGGCGCACTGTGACCCCCAGCTCCGGCCTGTCCT...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGAGGCAGGTGCGTGTTaGCTGTGCTGTGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFREAGAC*LCCGQP
Trigger: AGGCTGACCACAGCACAGCCAACACGCACCTGCCTC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTACAGGCAGGGGCCCCTaGGGCTCAGGGATCGTGGTA +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPTGRGP*GSGIVV
Trigger: TACCACGATCCCTGAGCCCCAGGGGCCCCTGCCTGT...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGGCAATGTTCTCCTCTaGCGCGTCCGGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPGNVLL*RVRALG
Trigger: GCCGAGAGCCCGGACGCGCCAGAGGAGAACATTGCC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTCCCCTGGGCCCTCTGTaGCTGGCCGGATGTGGAACA +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPPLGPL*LAGCGT
Trigger: TGTTCCACATCCGGCCAGCCACAGAGGGCCCAGGGG...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTTGCATGGGGCTCACCTaGGGGTCCCTGCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPCMGLT*GSLRTF
Trigger: GAAGGTGCGCAGGGACCCCCAGGTGAGCCCCATGCA...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACTAACGAAGCCACCGTaGTCTGCTCCTCGACTTCTT +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTLTKPP*SAPRLL
Trigger: AAGAAGTCGAGGAGCAGACCACGGTGGCTTCGTTAG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACACCCAGGGGACTCACTaGGCACGGGAGACCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHTQGTH*ARETRG
Trigger: CCCCCGGGTCTCCCGTGCCCAGTGAGTCCCCTGGGT...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTAGGCCCTTGGGGTCCTaGGGGCCCTCTCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPRPLGS*GPSLSN
Trigger: GTTGGAGAGAGAGGGCCCCCAGGACCCCAAGGGCCT...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCACCGCCGTCGGGGCTaGAGATGCTGCCCGGTTCAC +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHHRRRG*RCCPVH
Trigger: GTGAACCGGGCAGCATCTTCAGCCCCGACGGCGGTG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CGTGGTCTGATCAGGCCAAGAGGTTGCACAGGGCATGATACTGCACCCTGCCTGATTTCAGCCTCCAACTaGAGAAAGTCAAACGGAAAC +
Preference number: 4 (lower is better)
Translates to: RGLIRPRGCTGHDTAPCLISASN*RKSNGN
Trigger: GTTTCCGTTTGACTTTCTTCAGTTGGAGGCTGAAAT...CAGGCAGGGTGCAGTATCATGCCCTGTGCAACCTCTTGGCCTGATCAGACCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCAGCCTCAGCCTCTTTaGTGTGGCCGTGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRQPQPL*CGRVPS
Trigger: GGATGGAACACGGCCACATCAAAGAGGCTGAGGCTG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTGCCCTGTGTGCTGGCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTTTTATTTGCCTGTCTaGATTGGCTTCACATCACAC +
Preference number: 4 (lower is better)
Translates to: LPCVLATACPVPASASLMFYLPV*IGFTSH
Trigger: GTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAA...CATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGCCAGCACACAGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGTTGCCCTTGGGTCCTaGAGGTCCGGGAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPVALGS*RSGKAC
Trigger: GCAGGCTTTCCCGGACCTGCAGGACCCAAGGGCAAC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCCCACGGCCCGCGCCTaGTGGAAGCACTGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHPTARA*WKHWKS
Trigger: CGACTTCCAGTGCTTCCAGCAGGCGCGGGCCGTGGG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTCCCTGGATGGGAGGCTaGCAGACCCCAACTCATGGG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPPWMGG*QTPTHG
Trigger: CCCATGAGTTGGGGTCTGGCAGCCTCCCATCCAGGG...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGGTGCGTGTTGGCTGTaGTGTGGTCAGCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPGACWL*CGQPGA
Trigger: AGCGCCAGGCTGACCACAGCACAGCCAACACGCACC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACAGGGGGCCGCGTGCTTaGCCAGGGAGCCCATCACCA +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHRGPRA*PGSPSP
Trigger: TGGTGATGGGCTCCCTGGGCAAGCACGCGGCCCCCT...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359759.8
CDS-3UTR GCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGGGTCCCCAAGGAGCTaGAGCAGCCCCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHGSPRS*SSPTSS
Trigger: CGAGGAGGTGGGGCTGCTGCAGCTCCTTGGGGACCC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTTGCCAAATCCAAGGCTaGCATCTCCCGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRCQIQG*HLPAPL
Trigger: AAGGGGAGCCGGGAGATGCCAGCCTTGGATTTGGCA...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGGCTGGAAGTCGCGGTaGCTGTGGGCGGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHGWKSR*LWAGGL
Trigger: AAGCCCACCCGCCCACAGCCACCGCGACTTCCAGCC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACAAAGCAGGAAATCCTaGAGAAATCGAGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTQSRKS*RNRAVV
Trigger: GACCACGGCTCGATTTCTCCAGGATTTCCTGCTTTG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGAAGTCAGCACCTGCTaGGGCGAGCACGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPEVSTC*GEHGFP
Trigger: TGGGAAGCCGTGCTCGCCCCAGCAGGTGCTGACTTC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTATCTCATGGCTCATTTaGGAGGCCAGCCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRISWLI*EASPRL
Trigger: CAGCCTGGGGCTGGCCTCCCAAATGAGCCATGAGAT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAGGATGTATCATCTCATaGCTCATTTGGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTGCIIS*LIWEAS
Trigger: GCTGGCCTCCCAAATGAGCCATGAGATGATACATCC...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTTTGAATCTCCCAGCTTaGACTCGGCCAGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRLNLPA*TRPGWS
Trigger: GCTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAA...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGCCAGGGGCTGTCGCTaGCTCTGTGGAACCATTCCG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPARGCR*LCGTIP
Trigger: CGGAATGGTTCCACAGAGCCAGCGACAGCCCCTGGC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACGACTTCTTCACTTCTaGAATCTTCCGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTRLLHF*NLPCCC
Trigger: GCAGCAGCACGGAAGATTCCAGAAGTGAAGAAGTCG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCACTCCCGTCCCACGTaGAGACAGAATCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRHSRPT*RQNLSQ
Trigger: CTGGCTCAGATTCTGTCTCCACGTGGGACGGGAGTG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TTGCCTCACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGATTTCAGCCTCCAACTaGAGAAAGTCAAACGGAAAC +
Preference number: 4 (lower is better)
Translates to: LPHGACLLTGLGFVHRTVISASN*RKSNGN
Trigger: GTTTCCGTTTGACTTTCTTCAGTTGGAGGCTGAAAT...CACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTGAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTAATCGAGCCGTGGTCTaGTCAGGCCAAGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRNRAVV*SGQEVA
Trigger: TGCAACCTCTTGGCCTGATCAGACCACGGCTCGATT...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTCTGCTAGGTGGGAGATaGAGTCAGCACCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPLLGGR*SQHLLG
Trigger: CCCCAGCAGGTGCTGACTTCATCTCCCACCTAGCAG...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACTGGACAAGTGCTGGCTaGGCCACGTCCCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHWTSAG*ATSQPG
Trigger: CCCTGGCTGGGACGTGGCTCAGCCAGCACTTGTCCA...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCCTCCACAGAACGAATaGCTCGGGTTGATGTTGCCG +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRPPQNE*LGLMLP
Trigger: CGGCAACATCAACCCGAGTCATTCGTTCTGTGGAGG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp GCTACCGCATGTCCTGTGCCAGCCTCAGCCTCTTTGATGTGGCCGTGTTCCATCTTTTATTTGCCTGTCTaGATTGGCTTCACATCACAC +
Preference number: 4 (lower is better)
Translates to: ATACPVPASASLMWPCSIFYLPV*IGFTSH
Trigger: GTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAA...GATGGAACACGGCCACATCAAAGAGGCTGAGGCTGGCACAGGACATGCGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTTCCGGATGCCCCATCTaGGTCATCGCCTTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPSGCPI*VIAFLV
Trigger: GACGAGGAAGGCGATGACTCAGATGGGGCATCCGGA...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTCGGGCATTCCCCTCATaGCAAATCCAAGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRRAFPS*QIQGWH
Trigger: ATGCCAGCCTTGGATTTGGCATGAGGGGAATGCCCG...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTAGCCCCAGGCTGCTGTaGTTGGTGTTGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPSPRLL*LVLEDR
Trigger: CCTGTCCTCCAACACCAAGCACAGCAGCCTGGGGCT...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACACAGGGTGGAGCTGTCTaGTTTGGATGTATCATCTCA +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTQGGAV*FGCIIS
Trigger: TGAGATGATACATCCAAAGCAGACAGCTCCACCCTG...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp ACCCCAACTCATGGGTCCCTTGAATCTCCCAGCTTGGACTCGGCCAGGGTGGAGAAGGTCACTTTTATTTaGCTGTCTGAATTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TPTHGSLESPSLDSARVEKVTFI*LSELAS
Trigger: TGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTT...CTCCACCCTGGCCGAGTCCAAGCTGGGAGATTCAAGGGACCCATGAGTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTCCCGGGGACTCCATCTaGTCCAACTTCTCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPPGDSI*SNFSLR
Trigger: GCGAAGGGAGAAGTTGGAGCAGATGGAGTCCCCGGG...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACATTCCCTGGCAATCCTaGAGGCCCGGGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHIPWQS*RPGAAG
Trigger: TCCAGCCGCCCCGGGCCTCCAGGATTGCCAGGGAAT...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGGCCGTGTTCCATCCTaGCGCTCAGCTGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPGRVPS*RSAGQV
Trigger: CACTTGTCCAGCTGAGCGCCAGGATGGAACACGGCC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp TCTGAATTGGCTTCACATCACACACAATTACAGAACCAGCCCCACCGGTTTCGTGTGTCATTCCACAGCTaGACGAAGCTCCGGATGCCT +
Preference number: 4 (lower is better)
Translates to: SELASHHTQLQNQPHRFRVSFHS*TKLRMP
Trigger: AGGCATCCGGAGCTTCGTCCAGCTGTGGAATGACAC...ACGAAACCGGTGGGGCTGGTTCTGTAATTGTGTGTGATGTGAAGCCAATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCCAGCCTCGGTTGTGTaGGCGCCCGGAGAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHPASVV*APGELG
Trigger: TCCTAGCTCTCCGGGCGCCCACACAACCGAGGCTGG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGGGACCTACGTCCCCTaGAGTCCCGGGGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHGTYVP*SPGEAL
Trigger: CAAGGCTTCCCCGGGACTCCAGGGGACGTAGGTCCC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CACGGGGCCTGTCTGCTAACAGGTCTGGGTTTTGTGCACAGAACGGTGCTGCTATTTTATTTGCCTGTCTaGATTGGCTTCACATCACAC +
Preference number: 4 (lower is better)
Translates to: HGACLLTGLGFVHRTVLLFYLPV*IGFTSH
Trigger: GTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAA...TAGCAGCACCGTTCTGTGCACAAAACCCAGACCTGTTAGCAGACAGGCCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGCCCCACCTCCTCGCTaGTGCGCTCTGAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHAPPPR*CALKMV
Trigger: CACCATCTTCAGAGCGCATCAGCGAGGAGGTGGGGC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355480.10
CDS-3UTR GCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGTTGCCCTTGGGTCCTaGAGGTCCGGGAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHVALGS*RSGKAC
Trigger: GCAGGCTTTCCCGGACCTGCAGGACCCAAGGGCAAC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CAGGAAATCCTGGAGAAATCGAGCCGTGGTCTGATCAGGCCAAGAGGTTGCACAACTCAGCAAACACATTaGTGTCGTAAACAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QEILEKSSRGLIRPRGCTTQQTH*CRKQES
Trigger: GGACTCCTGTTTACGACAGCAATGTGTTTGCTGAGT...TGTGCAACCTCTTGGCCTGATCAGACCACGGCTCGATTTCTCCAGGATTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTCATGATACTGCACCCTaGCTGACCCAGCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPHDTAP*LTQLGS
Trigger: TGAGCCCAGCTGGGTCAGGCAGGGTGCAGTATCATG...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGCTTCAGCCTGGGGTTaGTGTGGAGAATGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPASAWG*CGEWPR
Trigger: TCTGGGCCATTCTCCACAGCAACCCCAGGCTGAAGC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTCTGAGCTTGGGAACCTaGTTCAGCCTGGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPLSLGT*FSLGLL
Trigger: CAGCAACCCCAGGCTGAAGCAGGTTCCCAAGCTCAG...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR GCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTCTGCTTCACCCAGGCTaGCTTTCTGCCCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPLLHPG*LSAQSF
Trigger: GAAGGACTGGGCAGAAAGGCAGCCTGGGTGAAGCAG...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACAGCCCAGGTTGCCCTTaGGTCCTGCAGGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHSPGCP*VLQVRE
Trigger: TTCCCGGACCTGCAGGACCCAAGGGCAACCTGGGCT...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGAGGCCCGGGGCGGCTaGACTCAGCAAACACATTGC +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHEARGG*TQQTHC
Trigger: GCAATGTGTTTGCTGAGTCCAGCCGCCCCGGGCCTC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCTCCTTTGGCGCCCTTaGGTCCTGGAGGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHLLWRP*VLEGPD
Trigger: ATCAGGGCCCTCCAGGACCCAAGGGCGCCAAAGGAG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGGCCCACTTCTCCTTTaGCGCCCTTGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHGPLLL*RPWVLE
Trigger: CTCCAGGACCCAAGGGCGCCAAAGGAGAAGTGGGCC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTATCTCATGGCTCATTTaGGAGGCCAGCCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPISWLI*EASPRL
Trigger: CAGCCTGGGGCTGGCCTCCCAAATGAGCCATGAGAT...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACTGGTGGTATCTGCTGTaGGCTGCACAGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHWWYLL*AAQAGA
Trigger: GGCCCCTGCCTGTGCAGCCCACAGCAGATACCACCA...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355480.10
ENST00000359759.8
CDS-3UTR CCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTGGTCTGGCCTGCACCTaGTTCTGTGTAGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPGLACT*FCVEQG
Trigger: TCCCTGCTCTACACAGAACCAGGTGCAGGCCAGACC...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTAATCGAGCCGTGGTCTaGTCAGGCCAAGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPNRAVV*SGQEVA
Trigger: TGCAACCTCTTGGCCTGATCAGACCACGGCTCGATT...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCTGCTAGGTGGGAGATaGAGTCAGCACCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHLLGGR*SQHLLG
Trigger: CCCCAGCAGGTGCTGACTTCATCTCCCACCTAGCAG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACCAGATGGCCTTGTGCTaGGTGTGGCCTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHQMALC*VWPQLP
Trigger: TGGGAGCTGAGGCCACACTCAGCACAAGGCCATCTG...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTTCTCAGGGGTGGCTGTaGCTGACAGAGGACCTTGTT +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPSQGWL*LTEDLV
Trigger: AACAAGGTCCTCTGTCAGTCACAGCCACCCCTGAGA...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR TCA 90 bp CTTGAGGATTACATGAAACGTGAACTATACAGGAAAGTATGGCAGCCAGGTCCTACGAATGACTCGGGTTaGTGTTGCCGGATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LEDYMKRELYRKVWQPGPTNDSG*CCRISG
Trigger: CCCTGAGATCCGGCAACATCAACCCGAGTCATTCGT...AGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTCATGTAATCCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10
ENST00000359759.8
ENST00000651438.1
CDS-3UTR CCA 90 bp CAGTGTAAAAGGTCACTTTTATTTGCCTGTCTGAATTGGCTTCACATCACACACGAGGCAGGTGCGTGTTaGCTGTGCTGTGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QCKRSLLFACLNWLHITHEAGAC*LCCGQP
Trigger: AGGCTGACCACAGCACAGCCAACACGCACCTGCCTC...GTGTGTGATGTGAAGCCAATTCAGACAGGCAAATAAAAGTGACCTTTTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342220.9
ENST00000355480.10