RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL17A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000065618

Ensembl transcript IDs: ENST00000369733.8, ENST00000393211.3, ENST00000433822.1, ENST00000480127.2, ENST00000483876.1, ENST00000488320.1, ENST00000647647.1, ENST00000648076.2, ENST00000649118.1, ENST00000650263.1

Found 782 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTCTGGAGACCTTGGACCTAAGTGCCACATGCATTATGAGACCTaGTCCAGGAGCTGTCCTGCCATGGCTAGCTCACGGCTTGACAGC +
Preference number: 1 (lower is better)
Translates to: PSGDLGPKCHMHYET*SRSCPAMASSRLDS
Trigger: GCTGTCAAGCCGTGAGCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR TCA 90 bp CAGCAGGAGCACAGTGCCCTCCGAGTGTCAAACTCCCAAAGCAGTTaGACTAGATCAAGCCGCAGCAAGGGTGAAGCCCTCCAACTTCCT +
Preference number: 1 (lower is better)
Translates to: QQEHSALRVSNSQSS*TRSSRSKGEALQLP
Trigger: AGGAAGTTGGAGGGCTTCACCCTTGCTGCGGCTTGATCTAGTTCAACTGCTTTGGGAGTTTGACACTCGGAGGGCACTGTGCTCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR GCA 90 bp GACTCCAGCTTTCACCCTCTGGAGACCTTGGACCTAAGTGCCACATaGATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCT +
Preference number: 1 (lower is better)
Translates to: DSSFHPLETLDLSAT*IMRPGPGAVLPWLA
Trigger: AGCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTGAAAGCTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR CCA 90 bp AGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATaGCTAGCTCACGGCTTGACAGCAATACTTCTTCTCCTTCTCCGC +
Preference number: 1 (lower is better)
Translates to: SATCIMRPGPGAVLP*LAHGLTAILLLLLR
Trigger: GCGGAGAAGGAGAAGAAGTATTGCTGTCAAGCCGTGAGCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR GCA 90 bp ATTGACAGACTCCAGCTTTCACCCTCTGGAGACCTTGGACCTAAGTaGCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATG +
Preference number: 1 (lower is better)
Translates to: IDRLQLSPSGDLGPK*HMHYETWSRSCPAM
Trigger: CATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTGAAAGCTGGAGTCTGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR TCA 90 bp AATGCAAATGCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTaGCTCAGCAGATCTGAGCTAGGGCTGGGATCCTGCTTTTATAAC +
Preference number: 1 (lower is better)
Translates to: NANANHLGSLLNCSF*LSRSELGLGSCFYN
Trigger: GTTATAAAAGCAGGATCCCAGCCCTAGCTCAGATCTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGCATTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
3UTR GCA 90 bp CTTTATTCCTTCCTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTaGTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATG +
Preference number: 1 (lower is better)
Translates to: LYSFLVHCPQPSFSV*SGLVQYNISMNSSM
Trigger: CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGAATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
3UTR CAA 90 bp GCAGCGATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTaGGTCATGATGAGCAGCTCCATCTCCTTCTTGGCAGGTGTGTTG +
Preference number: 2 (lower is better)
Translates to: AAMLAGEAVKTFPLS*VMMSSSISFLAGVL
Trigger: CAACACACCTGCCAAGAAGGAGATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCATCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
3UTR-3UTR CCA 90 bp CAGAGCTTGGGCACAGGAAGCAGGGATCTCCCAGTACCCTCTTCAGCAGGAGCAATGCATTATGAGACCTaGTCCAGGAGCTGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: QSLGTGSRDLPVPSSAGAMHYET*SRSCPA
Trigger: GGCAGGACAGCTCCTGGACCAGGTCTCATAATGCAT...TGCTCCTGCTGAAGAGGGTACTGGGAGATCCCTGCTTCCTGTGCCCAAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR-3UTR TCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCGTGCCACATGCATTATaGGACCTGGTCCAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: KCHMHYETWSRSCPAMASVPHAL*DLVQEL
Trigger: CAGCTCCTGGACCAGGTCTCATAATGCATGTGGCAC...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR-3UTR TCA 90 bp GTTGGAGGAATTCCGGGTGGGGCTCACACTTGCCGATCGACTCCCCTTGAGCAATCACTCTCTCGTGTTTaGCTCCGTCCTCTGGTTGAA +
Preference number: 2 (lower is better)
Translates to: VGGIPGGAHTCRSTPLEQSLSRV*LRPLVE
Trigger: TTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGA...TTGCTCAAGGGGAGTCGATCGGCAAGTGTGAGCCCCACCCGGAATTCCTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
3UTR CAA 90 bp TTGGAGGAATTCCGGGTGGGGCTCACACTTGCCGATCGACTCCCCTaGAGCAAACGCTTAACATCATCCAATTCTGTCCATCGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: LEEFRVGLTLADRLP*SKRLTSSNSVHRVD
Trigger: ATCCACCCGATGGACAGAATTGGATGATGTTAAGCGTTTGCTCAAGGGGAGTCGATCGGCAAGTGTGAGCCCCACCCGGAATTCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
3UTR CAA 90 bp CTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTCTGGAGACCTaGGACCTAAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: LSRTLTDSSFHPLET*DLSATCIMRPGPGA
Trigger: AGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR CAA 90 bp ACCTTCCCGCTGTCCTTGGTCATGATGAGCAGCTCCATCTCCTTCTaGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: TFPLSLVMMSSSISF*AGVLSFSRIRNLQS
Trigger: GGACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
3UTR-3UTR TCA 90 bp TTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTTTGGTCTCCGAAGACAATaGAATGAAATGTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: FITHSQVWLMLLARGPHFGLRRQ*NEMWPG
Trigger: GCCAGGCCACATTTCATTTCATTGTCTTCGGAGACC...AAAGTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
3UTR-3UTR CCA 90 bp TGCAAATGCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTGACTCAGCAGACACACTCCCAGGTGTaGCTGATGCTGCTGGCCCGT +
Preference number: 2 (lower is better)
Translates to: CKCKSPRKLVELQLLTQQTHSQV*LMLLAR
Trigger: ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGT...CTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGCATTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
3UTR-3UTR TCA 90 bp ACTTCTTCTCCTTCTCCGCCCAGCATAGACTTGGTCACCTTTGTCTCCTTTTTCGTGCCACATGCATTATaGGACCTGGTCCAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: TSSPSPPSIDLVTFVSFFVPHAL*DLVQEL
Trigger: CAGCTCCTGGACCAGGTCTCATAATGCATGTGGCAC...GAAAAAGGAGACAAAGGTGACCAAGTCTATGCTGGGCGGAGAAGGAGAAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR-3UTR GCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGACCTTGGACCTAAGTaGCACATGCATTATGAGACC +
Preference number: 2 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRDLGPK*HMHYET
Trigger: GGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTGGCCCAGGCTGGCCTaGTGGGCCCTGGACAGTGTA +
Preference number: 2 (lower is better)
Translates to: IALNLLFLFALAWFSITYWPRLA*WALDSV
Trigger: TACACTGTCCAGGGCCCACCAGGCCAGCCTGGGCCA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR CAA 90 bp TCCTTGGTCATGATGAGCAGCTCCATCTCCTTCTTGGCAGGTGTGTaGTCTTTCTCTAGGATCAGGAACTTGCAGTCCTTGTGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: SLVMMSSSISFLAGV*SFSRIRNLQSLCKR
Trigger: CCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGCTCATCATGACCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
3UTR-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAATGCATTATGAGACCTaGTCCAGGAGCTGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: SIALNLLFLFALAWFSITMHYET*SRSCPA
Trigger: GGCAGGACAGCTCCTGGACCAGGTCTCATAATGCAT...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATACTCTAGTATGGGCCTaGTCCAGGAGCTGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: IALNLLFLFALAWFSITYTLVWA*SRSCPA
Trigger: GGCAGGACAGCTCCTGGACCAGGCCCATACTAGAGT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433822.1
3UTR-3UTR CCA 90 bp CTCCCCTTGAGCAAACGCTTAACATCATCCAATTCTGTCCATCGGGTGGATGGGTTTGACTCCGTCCTCTaGTTGAAGAAGATGCATTTC +
Preference number: 2 (lower is better)
Translates to: LPLSKRLTSSNSVHRVDGFDSVL*LKKMHF
Trigger: GAAATGCATCTTCTTCAACCAGAGGACGGAGTCAAA...CCCATCCACCCGATGGACAGAATTGGATGATGTTAAGCGTTTGCTCAAGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
3UTR-3UTR TCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAAGGGGAGGAAGGAGCTaGTGGCACAGCCTTAGAACA +
Preference number: 2 (lower is better)
Translates to: NISMNSSMGLRTIIATIRRGGRS*WHSLRT
Trigger: TGTTCTAAGGCTGTGCCATCAGCTCCTTCCTCCCCT...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR-3UTR GCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTCAGCAGGAGCACAGTaGCCTCCGAGTGTCAAACTC +
Preference number: 2 (lower is better)
Translates to: IALNLLFLFALAWFSITYSAGAQ*PPSVKL
Trigger: GAGTTTGACACTCGGAGGGCACTGTGCTCCTGCTGA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR-3UTR TCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTGTGCCACATGCATTATaGGACCTGGTCCAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: YILFRLKQMLLARLAVLSVPHAL*DLVQEL
Trigger: CAGCTCCTGGACCAGGTCTCATAATGCATGTGGCAC...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR-3UTR GCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACAACTGACTAGAGAATaGAGAATGAACAGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: QYNISMNSSMGLRTIIATQLTRE*RMNRGG
Trigger: TCCTCCCCTGTTCATTCTGCATTCTCTAGTCAGTTG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR TCA 72 bp CCGCAGTCACGTTGCTGTAGGCAGAGAAGACCTTGCTaGTGCCGGGTGGCCCCTGTGGCCCAGGCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: PQSRCCRQRRPC*CRVAPVAQAGL
Trigger: CAGGCCAGCCTGGGCCACAGGGGCCACCCGGCATCAGCAAGGTCTTCTCTGCCTACAGCAACGTGACTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR CCA 72 bp GGCTGGGATCCTGCTTTTATAACACACTCCCAGGTGTaGCTGATGCTGCTGGCCCGTGGACCACACTTTGAG +
Preference number: 3 (lower is better)
Translates to: GWDPAFITHSQV*LMLLARGPHFE
Trigger: CTCAAAGTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
3UTR CCA 72 bp GACCTTGGACCTAAGTGCCACATGCATTATGAGACCTaGTCCAGGAGCTGTCCTGCCATGGCTAGCTCACGG +
Preference number: 3 (lower is better)
Translates to: DLGPKCHMHYET*SRSCPAMASSR
Trigger: CCGTGAGCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR-3UTR CAA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGACACCCTCTGGAGACCTaGGACCTAAGTGCCACATGC +
Preference number: 3 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRHPLET*DLSATC
Trigger: GCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTG...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR TCA 72 bp CACAGTGCCCTCCGAGTGTCAAACTCCCAAAGCAGTTaGACTAGATCAAGCCGCAGCAAGGGTGAAGCCCTC +
Preference number: 3 (lower is better)
Translates to: HSALRVSNSQSS*TRSSRSKGEAL
Trigger: GAGGGCTTCACCCTTGCTGCGGCTTGATCTAGTTCAACTGCTTTGGGAGTTTGACACTCGGAGGGCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR GCA 72 bp GAGTGTGTTGGAGGAATTCCGGGTGGGGCTCACACTTaGCGATCGACTCCCCTTGAGCAAACGCTTAACATC +
Preference number: 3 (lower is better)
Translates to: ECVGGIPGGAHT*RSTPLEQTLNI
Trigger: GATGTTAAGCGTTTGCTCAAGGGGAGTCGATCGGCAAGTGTGAGCCCCACCCGGAATTCCTCCAACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
3UTR GCA 72 bp AGGGATCTCCCAGTACCCTCTTCAGCAGGAGCACAGTaGCCTCCGAGTGTCAAACTCCCAAAGCAGTTGAAC +
Preference number: 3 (lower is better)
Translates to: RDLPVPSSAGAQ*PPSVKLPKQLN
Trigger: GTTCAACTGCTTTGGGAGTTTGACACTCGGAGGGCACTGTGCTCCTGCTGAAGAGGGTACTGGGAGATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR-3UTR CAA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCACACCCTCTGGAGACCTaGGACCTAAGTGCCACATGC +
Preference number: 3 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPHPLET*DLSATC
Trigger: GCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTG...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR GCA 72 bp CTCCAGCTTTCACCCTCTGGAGACCTTGGACCTAAGTaGCACATGCATTATGAGACCTGGTCCAGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: LQLSPSGDLGPK*HMHYETWSRSC
Trigger: ACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTGAAAGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR-3UTR CAA 90 bp CAGTACCCTCTTCAGCAGGAGCACAGTGCCCTCCGAGTGTCAAACTCCCAAAGCTGTCTCAGTAGGACATaGACAGACTCCAGCTTTCAC +
Preference number: 3 (lower is better)
Translates to: QYPLQQEHSALRVSNSQSCLSRT*TDSSFH
Trigger: GTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACA...GCTTTGGGAGTTTGACACTCGGAGGGCACTGTGCTCCTGCTGAAGAGGGTACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR-3UTR CAA 90 bp AAAGAAGTTGCAGCGATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTCTAGGATCAGGAACTaGCAGTCCTTGTGCAAAAGG +
Preference number: 3 (lower is better)
Translates to: KEVAAMLAGEAVKTFPLSSRIRN*QSLCKR
Trigger: CCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGA...GGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCATCGCTGCAACTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488320.1
3UTR TCA 72 bp GCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTaGCTCAGCAGATCTGAGCTAGGGCTGGGATCCTGC +
Preference number: 3 (lower is better)
Translates to: ANHLGSLLNCSF*LSRSELGLGSC
Trigger: GCAGGATCCCAGCCCTAGCTCAGATCTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
3UTR CCA 72 bp TGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATaGCTAGCTCACGGCTTGACAGCAATACTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: CIMRPGPGAVLP*LAHGLTAILLL
Trigger: GAGAAGAAGTATTGCTGTCAAGCCGTGAGCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR-3UTR CAA 90 bp TCACGGCTTGACAGCAATACTTCTTCTCCTTCTCCGCCCAGCATAGACTTGGTCGTAAAACACCAGAGCTaGGGCACAGGAAGCAGGGAT +
Preference number: 3 (lower is better)
Translates to: SRLDSNTSSPSPPSIDLVVKHQS*GTGSRD
Trigger: ATCCCTGCTTCCTGTGCCCAAGCTCTGGTGTTTTAC...GACCAAGTCTATGCTGGGCGGAGAAGGAGAAGAAGTATTGCTGTCAAGCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR-3UTR CAA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGACCCGTGGACCACACTTaGAGTAGCAAGGTCTCCGAA +
Preference number: 3 (lower is better)
Translates to: DMAEAGFCFSNANANHLGPVDHT*SSKVSE
Trigger: TTCGGAGACCTTGCTACTCAAAGTGTGGTCCACGGG...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
3UTR TCA 72 bp GTCCTTGAATGGCTCCATAAGTTTGGAAGAAGTCCATaGGGTCCGCAGTCACGTTGCTGTAGGCAGAGAAGA +
Preference number: 3 (lower is better)
Translates to: VLEWLHKFGRSP*GPQSRCCRQRR
Trigger: TCTTCTCTGCCTACAGCAACGTGACTGCGGACCTCATGGACTTCTTCCAAACTTATGGAGCCATTCAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR CCA 72 bp CTCGAATTTCACTCTCTCGTGTTTGACTCCGTCCTCTaGTTGAAGAAGATGCATTTCTATAGTGCCACGAGC +
Preference number: 3 (lower is better)
Translates to: LEFHSLVFDSVL*LKKMHFYSATS
Trigger: GCTCGTGGCACTATAGAAATGCATCTTCTTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGAAATTCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483876.1
3UTR-3UTR CAA 90 bp TCCTTGAATGGCTCCATAAGTTTGGAAGAAGTCCATGAGGTCCGCAGTCACGTTAGACTAAAACAAATGTaGCTAGCTAGGTTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: SLNGSISLEEVHEVRSHVRLKQM*LARLAV
Trigger: CACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCT...AACGTGACTGCGGACCTCATGGACTTCTTCCAAACTTATGGAGCCATTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647647.1
3UTR-3UTR CAA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATCTCATTCTAAAACATaGCAACTACTGTTAGAGTCC +
Preference number: 3 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPSHSKT*QLLLES
Trigger: GGACTCTAACAGTAGTTGCAATGTTTTAGAATGAGA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR-3UTR CAA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACATTCCTTCCTTGTCCATaGCCCTCAACCTTCTTTTTC +
Preference number: 3 (lower is better)
Translates to: QYNISMNSSMGLRTIIATFLPCP*PSTFFF
Trigger: GAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGAA...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR-3UTR CAA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAAGACTAAAACAAATGTaGCTAGCTAGGTTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: QYNISMNSSMGLRTIIATRLKQM*LARLAV
Trigger: CACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCT...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCTGCTCCCGCCGCGGGTaGCATGCCCTGGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASCSRRG*HALEAV
Trigger: GACCGCCTCCAGGGCATGGCACCCGCGGCGGGAGCA...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACACCAGAGCTTGGGCACAGGAAGCAGGGATCTCCCAGTACCCTCTTCAGCAGCTTGCTGATGCCGGGTaGCCCCTGTGGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NTRAWAQEAGISQYPLQQLADAG*PLWPRL
Trigger: CAGCCTGGGCCACAGGGGCCACCCGGCATCAGCAAG...CTGCTGAAGAGGGTACTGGGAGATCCCTGCTTCCTGTGCCCAAGCTCTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR TCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCGGGGGCCTGGGACAGTaGGCATCGATGACCCCTCCG +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASGGLGQ*ASMTPP
Trigger: CGGAGGGGTCATCGATGCTCACTGTCCCAGGCCCCC...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGGATCCTGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTACCCCGCGGGCAGGGTaGAGGACCACACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: WDPAFITHSQVWLMLLARTPRAG*RTTHGR
Trigger: CCTCCCATGTGTGGTCCTCCACCCTGCCCGCGGGGT...ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGATGGAATGGAAGGCCCTaGTGGCCCGCGTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRWNGRP*WPAWAG
Trigger: CCCGGCCCACGCGGGCCACCAGGGCCTTCCATTCCA...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCCAAACCCTCCCCTGGTaGGCCTCGGGGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASQTLPW*ASGSWW
Trigger: CCACCAGGACCCCGAGGCCCACCAGGGGAGGGTTTG...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAGGCTCCTGGTGGCCCTaGCGGACCCCGAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPGSWWP*RTPRAH
Trigger: ATGGGCCCTCGGGGTCCGCCAGGGCCACCAGGAGCC...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCCTGGGATCCCTGGTaGACCCGGGGGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMAWDPW*TRGTWG
Trigger: CCCCCAGGTCCCCCGGGTCCACCAGGGATCCCAGGC...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR TCA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACAACTCCCAGGTGTGGCTaGTGCTGCTGGCCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTTPRCG*CCWPVD
Trigger: GTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGT...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAACCCCGCGGGCAGGGTaGAGGACCACACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRTPRAG*RTTHGR
Trigger: CCTCCCATGTGTGGTCCTCCACCCTGCCCGCGGGGT...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGGATCCTGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTTGTGATAGGTCCCCATaGAGGACCCCGCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WDPAFITHSQVWLMLLARCDRSP*RTPRAG
Trigger: CCCTGCCCGCGGGGTCCTCCATGGGGACCTATCACA...ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TGGGATCCTGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTCGCTCTGCACACTTGTaGTGCAGGCGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WDPAFITHSQVWLMLLARRSAHL*CRRRRW
Trigger: CCACCTCCGCCGCCTGCACCACAAGTGTGCAGAGCG...ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCGGACAGGAACGATCCTaGTGGGCCTGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASGQERS*WAWWAW
Trigger: CCAGGCCCACCAGGCCCACCAGGATCGTTCCTGTCC...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGGGACCCATCTCCACTaGCTCCTGGTGGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRGTHLH*LLVALA
Trigger: CGCCAGGGCCACCAGGAGCCAGTGGAGATGGGTCCC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAGAGCTTGGGCACAGGAAGCAGGGATCTCCCAGTACCCTCTTCAGCAGGAGCACCCATAGCCTCCGCCTaGGCCGATGTCAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: QSLGTGSRDLPVPSSAGAPIASA*ADVSAI
Trigger: TATGGCACTGACATCGGCCCAGGCGGAGGCTATGGG...TGCTCCTGCTGAAGAGGGTACTGGGAGATCCCTGCTTCCTGTGCCCAAGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCTGGCCCAGGCTGGCCTaGTGGGCCCTGGACAGTGTA +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASWPRLA*WALDSV
Trigger: TACACTGTCCAGGGCCCACCAGGCCAGCCTGGGCCA...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAGGAGTAGCAGCCAGGTaGGCAGCAGGCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAEGVAAR*AAGPAA
Trigger: GGCTGCTGGGCCTGCTGCTCACCTGGCTGCTACTCC...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGTACCGGGAAGTCCCTaGGGTCCCTGGGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRVPGSP*GPWGPV
Trigger: CACAGGACCCCAGGGACCTCAGGGACTTCCCGGTAC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTTGAGCCTGGGGAGTTaGGCAGAGTGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AFITHSQVWLMLLARGPHLSLGS*AEWRQV
Trigger: CACCTGCCTCCACTCTGCCCAACTCCCCAGGCTCAA...GTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp AAAGAAGTTGCAGCGATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCGTGGTGGTGGTGCCATaGGACAGGGTGGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KEVAAMLAGEAVKTFPLSVVVVP*DRVVKL
Trigger: CAGCTTGACCACCCTGTCCCATGGCACCACCACCAC...GGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCATCGCTGCAACTTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp ATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCCTGTGGAAGTGGTGGTaGTGCCATGGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: MLAGEAVKTFPLSLVMMSLWKWW*CHGTGW
Trigger: CCACCCTGTCCCATGGCACCACCACCACTTCCACAG...GCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCCACCACGAGGTCCCATaGGGCCTTCTCGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASHHEVP*GLLALS
Trigger: AGAGAGGGCGAGAAGGCCCCATGGGACCTCGTGGTG...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCCTCGGGGTCCTGGTaGGCCTGGAATGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMASGSW*AWNGRP
Trigger: GGGCCTTCCATTCCAGGCCCACCAGGACCCCGAGGC...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATGGGCCTGGTGGGCCTaGCAAACCCTCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPWAWWA*QTLPWW
Trigger: CCACCAGGGGAGGGTTTGCCAGGCCCACCAGGCCCA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCCAGGAACGATCCTGGTaGGCCTGGTGGGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASQERSW*AWWAWQ
Trigger: TTGCCAGGCCCACCAGGCCCACCAGGATCGTTCCTG...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAGGTGGTGACAGGTCCTaGGGGACCAGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPGGDRS*GTRWAW
Trigger: CCAGGCCCACCTGGTCCCCCAGGACCTGTCACCACC...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGGCTCCTGGTGGCCCTaGCGGACCCCGAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHGSWWP*RTPRAH
Trigger: ATGGGCCCTCGGGGTCCGCCAGGGCCACCAGGAGCC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCTTGCTGATGCCGGGTaGCCCCTGTGGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWLADAG*PLWPRL
Trigger: CAGCCTGGGCCACAGGGGCCACCCGGCATCAGCAAG...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCACTTGCTGATGCCGGGTaGCCCCTGTGGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPLADAG*PLWPRL
Trigger: CAGCCTGGGCCACAGGGGCCACCCGGCATCAGCAAG...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp GCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACACACACTCCCAGGTGTaGCTGATGCTGCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: AFITHSQVWLMLLARGPHTHSQV*LMLLAR
Trigger: ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGT...GTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp GCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCAGGCCAAACAGTCAATGTaGGCTCACGTCCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: AGRGGCKDLPAVLGHDEQAKQSM*AHVPSP
Trigger: AGGCGAGGGGACGTGAGCCCACATTGACTGTTTGGC...CTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR TCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAGTACCGGGAAGTCCCTaGGGTCCCTGGGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPVPGSP*GPWGPV
Trigger: CACAGGACCCCAGGGACCTCAGGGACTTCCCGGTAC...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGGATCCTGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGTGGGGCTCACACTTaGCGATCGACTCCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: WDPAFITHSQVWLMLLARGGAHT*RSTPLE
Trigger: CTCAAGGGGAGTCGATCGGCAAGTGTGAGCCCCACC...ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp ATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCTCTGCACACTTGTGGTaGAGGCGGCGGAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: MLAGEAVKTFPLSLVMMSSAHLW*RRRRWK
Trigger: TTTCCACCTCCGCCGCCTGCACCACAAGTGTGCAGA...GCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR GCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAACCAAAGGCACCGCCTaGACCCAGGGAGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPTKGTA*TQGACT
Trigger: GGTGCAGGCTCCCTGGGTGCAGGCGGTGCCTTTGGT...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCCTGGGCCGATGTCAGTaGCATAGGGACCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASLGRCQ*HRDPCL
Trigger: GAGACAGGGGTCCCTATGGCACTGACATCGGCCCAG...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCATGCCGCCTTCTGCTaGTGCCCCATAGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWHAAFC*CPIASA
Trigger: GGCGGAGGCTATGGGGCAGCAGCAGAAGGCGGCATG...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTCATGCCGCCTTCTGCTaGTGCCCCATAGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPHAAFC*CPIASA
Trigger: GGCGGAGGCTATGGGGCAGCAGCAGAAGGCGGCATG...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCGGCCCTGACGCTGCATaGTCTCTGACACCCTCACAG +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASGPDAA*SLTPSQ
Trigger: CTGTGAGGGTGTCAGAGAGCATGCAGCGTCAGGGCC...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACAGGATGGGGAGTGTGTTaGAGGAATTCCGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTGWGVC*RNSGWG
Trigger: GCCCCACCCGGAATTCCTCCAACACACTCCCCATCC...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATGTGATAGGTCCCCATaGAGGACCCCGCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPCDRSP*RTPRAG
Trigger: CCCTGCCCGCGGGGTCCTCCATGGGGACCTATCACA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTTGCAGCGATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCACAGCCGCAGGACTCTaGGGCATGTTTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: VAAMLAGEAVKTFPLSLVTAAGL*GMFFFT
Trigger: GGTGAAGAAAAACATGCCCCAGAGTCCTGCGGCTGT...GACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCATCGCTGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATGTGGGAGGCATCCGTaGACAGGAGGCGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPCGRHP*TGGGCP
Trigger: GGGACAGCCGCCTCCTGTCCACGGATGCCTCCCACA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
3UTR CAA 72 bp GGTCCAGGAGCTGTCCTGCCATGGCTAGCTCACGGCTaGACAGCAATACTTCTTCTCCTTCTCCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPGAVLPWLAHG*TAILLLLLRPA
Trigger: TGCTGGGCGGAGAAGGAGAAGAAGTATTGCTGTCAAGCCGTGAGCTAGCCATGGCAGGACAGCTCCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAGCGATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCAGTAGGCATTGGTGTTaGGGAGGGATGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KEVAAMLAGEAVKTFPLSSRHWC*GGMSSG
Trigger: CCCAGAGCTCATCCCTCCTCAACACCAATGCCTACT...GGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCATCGCTGCAACTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAGCGATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCAGGGTGCAAAGTGGGTaGGCAGGACGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: KEVAAMLAGEAVKTFPLSRVQSG*AGRHVV
Trigger: AACAACATGGCGTCCTGCTCACCCACTTTGCACCCT...GGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCATCGCTGCAACTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR TCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTCTGGAGGGCCTGGGATaGATGACAAGCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPLEGLG*MTSRQL
Trigger: GAGCTGCCGGCTTGTCATTCATCCCAGGCCCTCCAG...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369733.8
CDS-3UTR TCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGGTTGCCAGGGCTCCTaGGACACCCGGGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISGCQGS*DTRGPS
Trigger: CGAGGGCCCCCGGGTGTCTCAGGAGCCCTGGCAACC...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp AGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCAGCTCCATTGGAAGTGGTGGTGGTaGCATGGGACAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGGCKDLPAVLGHDEQLHWKWWW*HGTGWS
Trigger: TGACCACCCTGTCCCATGGCACCACCACCACTTCCA...ATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR GCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTCCATGGGGCCTTCCATaGCAGGATCTCCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPPWGLP*QDLPRC
Trigger: GCAGCGTGGGAGATCCTGGCATGGAAGGCCCCATGG...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CAGAGCTTGGGCACAGGAAGCAGGGATCTCCCAGTACCCTCTTCAGCAGGAGCACTTTGGGTCCTGGAGTaGCCATCTCTCCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: QSLGTGSRDLPVPSSAGALWVLE*PSLLFA
Trigger: GGCAAAAAGGAGAGATGGGCACTCCAGGACCCAAAG...TGCTCCTGCTGAAGAGGGTACTGGGAGATCCCTGCTTCCTGTGCCCAAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGGGGAGTTGGGCAGAGTaGAGGCAGGTGAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWGSWAE*RQVSEP
Trigger: GGGCTCACTCACCTGCCTCCACTCTGCCCAACTCCC...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATTTGAGCCTGGGGAGTTaGGCAGAGTGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IQFCPSGGWGRTLQSNSNLSLGS*AEWRQV
Trigger: CACCTGCCTCCACTCTGCCCAACTCCCCAGGCTCAA...ATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CCA 90 bp TTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTTTTGTCCATCGGGTGGATaGGGACGCACTCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: FITHSQVWLMLLARGPHFCPSGG*GRTLQS
Trigger: CGACTGCAGAGTGCGTCCCCATCCACCCGATGGACA...AAAGTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp GGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATTTCACTCTCTCGTGTTTGTGTCCATCGGGTGGATaGGGACGCACTCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GGWGRTLQSNSNFTLSCLCPSGG*GRTLQS
Trigger: CGACTGCAGAGTGCGTCCCCATCCACCCGATGGACA...CAAACACGAGAGAGTGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CCA 90 bp TGGGATCCTGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTTGGAGGAATTCCGGGTaGGGCTCACACTTGCCGATC +
Preference number: 4 (lower is better)
Translates to: WDPAFITHSQVWLMLLARWRNSG*GSHLPI
Trigger: GATCGGCAAGTGTGAGCCCCACCCGGAATTCCTCCA...ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp ATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATTTCACTCTCTCGTGTGGAGGAATTCCGGGTaGGGCTCACACTTGCCGATC +
Preference number: 4 (lower is better)
Translates to: IGWMGTHSAVELEFHSLVWRNSG*GSHLPI
Trigger: GATCGGCAAGTGTGAGCCCCACCCGGAATTCCTCCA...CACGAGAGAGTGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CCA 90 bp CCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATTTGGATGGGGAGTGTGTTaGAGGAATTCCGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PILSIGWMGTHSAVELEFGWGVC*RNSGWG
Trigger: GCCCCACCCGGAATTCCTCCAACACACTCCCCATCC...AAATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CCA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACAGTGGAGGACCACACATaGGAGGGAAGGTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTVEDHT*EGRLAS
Trigger: GGATGCCAACCTTCCCTCCCATGTGTGGTCCTCCAC...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTTTGTGGTGGTGGTGCCATaGGACAGGGTGGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: FITHSQVWLMLLARGPHFVVVVP*DRVVKL
Trigger: CAGCTTGACCACCCTGTCCCATGGCACCACCACCAC...AAAGTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp GCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCCGCTCTGCACACTTGTaGTGCAGGCGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: APSPSWQVCCLSLGSGTCRSAHL*CRRRRW
Trigger: CCACCTCCGCCGCCTGCACCACAAGTGTGCAGAGCG...GCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTCCTTGTGGACCTGGGTaGCCCAAGGGCCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPPCGPG*PKGPGI
Trigger: TATCCCTGGGCCCTTGGGCCACCCAGGTCCACAAGG...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAGCCCTCTCTGGCCCATaGGGCCTTCCATGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPALSGP*GLPCQD
Trigger: ATCCTGGCATGGAAGGCCCCATGGGCCAGAGAGGGC...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCCCTCTCTGGCCCATaGGGCCTTCCATGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMALSGP*GLPCQD
Trigger: ATCCTGGCATGGAAGGCCCCATGGGCCAGAGAGGGC...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCACCTTCTCGCCCTCTCTaGCCCATGGGGCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPPSRPL*PMGPSM
Trigger: CATGGAAGGCCCCATGGGCCAGAGAGGGCGAGAAGG...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAGCCTTGGTGTCCGTCTaGGCCAGCAGGACCCATTGC +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAEALVSV*ASRTHC
Trigger: GCAATGGGTCCTGCTGGCCCAGACGGACACCAAGGC...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGATCACCTCTTGGGCCTTaGTGTCCGTCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRSPLGP*CPSGPA
Trigger: TGCTGGCCCAGACGGACACCAAGGCCCAAGAGGTGA...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCGAGACCTGGCTTTCCTaGGTCTCCAGAAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASETWLS*VSRRSW
Trigger: CCAGGACCTTCTGGAGACCCAGGAAAGCCAGGTCTC...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCCCAGGCTGGCCTGGTaGGCCCTGGACAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHPRLAW*ALDSVG
Trigger: GCCTACACTGTCCAGGGCCCACCAGGCCAGCCTGGG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp GGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATTTCACTCTCTCGTGTTTCAGAGTGGAGGCAGGTaGGTGAGCCCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: GWMGTHSAVELEFHSLVFQSGGR*VSPPVT
Trigger: AGTTACAGGAGGGCTCACTCACCTGCCTCCACTCTG...AAACACGAGAGAGTGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR TCA 90 bp GCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCAGCTCCATCTCCTTCCTGAGGAGGATGTGCTaGGTCCAGGGTGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: AVKTFPLSLVMMSSSISFLRRMC*VQGAKW
Trigger: CCACTTTGCACCCTGGACTCAGCACATCCTCCTCAG...GAAGGAGATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR TCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAGGACGAGAACAAGCTaGCACCGTACCCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRRTRTS*HRTPKS
Trigger: GGACTTCGGGGTACGGTGTCAGCTTGTTCTCGTCCT...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp ACTCCCAAAGCAGTTGAACTAGATCAAGCCGCAGCAAGGGTGAAGCCCTCCAACGGTGACGTCTTGAGCTaGTGCTGTGTCCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: TPKAVELDQAAARVKPSNGDVLS*CCVPSI
Trigger: GATGCTGGGGACACAGCATCAGCTCAAGACGTCACC...GTTGGAGGGCTTCACCCTTGCTGCGGCTTGATCTAGTTCAACTGCTTTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR TCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAAGGCTGCATGCTCTCTaGCACCCTCACAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAERLHAL*HPHSQL
Trigger: GAGCTGGCTGTGAGGGTGTCAGAGAGCATGCAGCCT...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR GCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTGGTGGGGCTCACACTTaGCGATCGACTCCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPGGAHT*RSTPLE
Trigger: CTCAAGGGGAGTCGATCGGCAAGTGTGAGCCCCACC...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGTGTGTGAGGAGGAGCTaGTACCCCGACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMCVRRS*YPDCGR
Trigger: CCTCCCACAGTCGGGGTAGCAGCTCCTCCTCACACA...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATACCAAAGGCACCGCCTaGACCCAGGGAGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHTKGTA*TQGACT
Trigger: GGTGCAGGCTCCCTGGGTGCAGGCGGTGCCTTTGGT...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAGGGACCCCTGTCTCCTaGAGCTTCACCAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAEGTPVS*SFTKGT
Trigger: GGTGCCTTTGGTGAAGCTGCAGGAGACAGGGGTCCC...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTCTGGGCCGATGTCAGTaGCATAGGGACCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPLGRCQ*HRDPCL
Trigger: GAGACAGGGGTCCCTATGGCACTGACATCGGCCCAG...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCATGCCGCCTTCTGCTaGTGCCCCATAGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHHAAFC*CPIASA
Trigger: GGCGGAGGCTATGGGGCAGCAGCAGAAGGCGGCATG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp ATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATTTCACTCTCTCGTGCTAGAGGTGGAGGCATaGCCTCGTGTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: IGWMGTHSAVELEFHSLVLEVEA*PRVLPV
Trigger: AACTGGAAGCACACGAGGCCATGCCTCCACCTCTAG...CACGAGAGAGTGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATTGAGCCTGGGGAGTTaGGCAGAGTGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAELSLGS*AEWRQV
Trigger: CACCTGCCTCCACTCTGCCCAACTCCCCAGGCTCAA...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTTTGAGCCTGGGGAGTTaGGCAGAGTGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPLSLGS*AEWRQV
Trigger: CACCTGCCTCCACTCTGCCCAACTCCCCAGGCTCAA...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTTGTCCATCGGGTGGATaGGGACGCACTCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPCPSGG*GRTLQS
Trigger: CGACTGCAGAGTGCGTCCCCATCCACCCGATGGACA...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCATTCTGTCCATCGGGTaGATGGGGACGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASILSIG*MGTHSA
Trigger: TGCAGAGTGCGTCCCCATCCACCCGATGGACAGAAT...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TCATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATTCTGTCCATCGGGTaGATGGGGACGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSNSVHRVDGDALCSRTRILSIG*MGTHSA
Trigger: TGCAGAGTGCGTCCCCATCCACCCGATGGACAGAAT...TCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CCA 90 bp CCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTTGTGATAGGTCCCCATaGAGGACCCCGCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PSPSWQVCCLSLGSGTCSCDRSP*RTPRAG
Trigger: CCCTGCCCGCGGGGTCCTCCATGGGGACCTATCACA...ACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp ATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCCATATGCTGTGGAAGTaGTGGTGGTGCCATGGGACA +
Preference number: 4 (lower is better)
Translates to: MLAGEAVKTFPLSLVMMSHMLWK*WWCHGT
Trigger: TGTCCCATGGCACCACCACCACTTCCACAGCATATG...GCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp GCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACACAGCCGCAGGACTCTaGGGCATGTTTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: AFITHSQVWLMLLARGPHTAAGL*GMFFFT
Trigger: GGTGAAGAAAAACATGCCCCAGAGTCCTGCGGCTGT...GTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATGCAGGCGGCGGAGGTaGAAACGCCAGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPCRRRR*KRQCSQ
Trigger: CTGTGAACACTGGCGTTTCCACCTCCGCCGCCTGCA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGACCCTTTGGTCCTTGTaGACCTGGGTGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWTLWSL*TWVAQG
Trigger: CCCTTGGGCCACCCAGGTCCACAAGGACCAAAGGGT...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTACCTGGGACACCAGGTaGGCCATGAGGACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPTWDTR*AMRTWF
Trigger: GAACCAGGTCCTCATGGCCCACCTGGTGTCCCAGGT...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTGGGCCTCGGGGTCCTaGTGGGCCTGGAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHWASGS*WAWNGR
Trigger: CCTTCCATTCCAGGCCCACCAGGACCCCGAGGCCCA...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGGGACCCATCTCCACTaGCTCCTGGTGGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYGTHLH*LLVALA
Trigger: CGCCAGGGCCACCAGGAGCCAGTGGAGATGGGTCCC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATAAGTTTGGAAGAAGTCCATGAGGTCCGCAGTCACGTTGCTGTAGGCAGAGAATGGCCCAGGCTGGCCTaGTGGGCCCTGGACAGTGTA +
Preference number: 4 (lower is better)
Translates to: ISLEEVHEVRSHVAVGREWPRLA*WALDSV
Trigger: TACACTGTCCAGGGCCCACCAGGCCAGCCTGGGCCA...TTCTCTGCCTACAGCAACGTGACTGCGGACCTCATGGACTTCTTCCAAACTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGGAGCTGTCCTGCCATaGCTAGCTCACGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRGAVLP*LAHGLT
Trigger: TGTCAAGCCGTGAGCTAGCCATGGCAGGACAGCTCC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATAGGCCTTGCTCGCCTTaGTGTCCTCTGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHRPCSP*CPLGPG
Trigger: CCCAGGCCCCAGAGGACACCAAGGCGAGCAAGGCCT...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATATTGCCTGGGATCCCTaGTGGACCCGGGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHIAWDP*WTRGTW
Trigger: CCAGGTCCCCCGGGTCCACCAGGGATCCCAGGCAAT...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR TCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCACAGAGTGGAGGCAGGTaGGTGAGCCCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPQSGGR*VSPPVT
Trigger: AGTTACAGGAGGGCTCACTCACCTGCCTCCACTCTG...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp AGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCAGCTCCATGGTGTTGAGGAGGGATaGGCTCTGGGTTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: RGGCKDLPAVLGHDEQLHGVEEG*ALGCHV
Trigger: AACATGACAACCCAGAGCTCATCCCTCCTCAACACC...ATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR TCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCACTGAGGAGGATGTGCTaGGTCCAGGGTGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPLRRMC*VQGAKW
Trigger: CCACTTTGCACCCTGGACTCAGCACATCCTCCTCAG...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTGCCAGGCTCGCCTGTaGGGCCTCGAGGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHCQARL*GLEVLS
Trigger: AGAAAGGACCTCGAGGCCTCACAGGCGAGCCTGGCA...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGGGGGCCTGGGACAGTaGGCATCGATGACCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPGGLGQ*ASMTPP
Trigger: CGGAGGGGTCATCGATGCTCACTGTCCCAGGCCCCC...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGAGGACGAGAACAAGCTaGCACCGTACCCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWRTRTS*HRTPKS
Trigger: GGACTTCGGGGTACGGTGTCAGCTTGTTCTCGTCCT...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGGTTGCCAGGGCTCCTaGGACACCCGGGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYGCQGS*DTRGPS
Trigger: CGAGGGCCCCCGGGTGTCTCAGGAGCCCTGGCAACC...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTGGTGACGTCTTGAGCTaGTGCTGTGTCCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPGDVLS*CCVPSI
Trigger: GATGCTGGGGACACAGCATCAGCTCAAGACGTCACC...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TGTGTTGGAGGAATTCCGGGTGGGGCTCACACTTGCCGATCGACTCCCCTTGAGTTATGTAGCCGCTGCTaGCATGAGTCAGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: CVGGIPGGAHTCRSTPLELCSRC*HESGFV
Trigger: AACAAAGCCTGACTCATGGCAGCAGCGGCTACATAA...CTCAAGGGGAGTCGATCGGCAAGTGTGAGCCCCACCCGGAATTCCTCCAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR GCA 90 bp TCATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAACTCCGGAGAAGAGTTaGCACTGGAGCTCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSNSVHRVDGDALCSRTRTPEKS*HWSSLH
Trigger: ATGAAGGGAGCTCCAGTGGCAACTCTTCTCCGGAGT...TCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR GCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGTCGTTGCATCGTAGGTaGCTGACACCGACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMSLHRR*LTPTGS
Trigger: GCTCCCAGTCGGTGTCAGGCACCTACGATGCAACGA...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGTCTGCACACTTGTGGTaGAGGCGGCGGAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMSAHLW*RRRRWK
Trigger: TTTCCACCTCCGCCGCCTGCACCACAAGTGTGCAGA...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTGCTCCCGCCGCGGGTaGCATGCCCTGGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYCSRRG*HALEAV
Trigger: GACCGCCTCCAGGGCATGGCACCCGCGGCGGGAGCA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCGCACGTCATCCCGCTaGAGCACAGCCAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWRTSSR*STARMS
Trigger: AGACATTCTGGCTGTGCTGCAGCGGGATGACGTGCG...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAACGCACGTCATCCCGCTaGAGCACAGCCAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAERTSSR*STARMS
Trigger: AGACATTCTGGCTGTGCTGCAGCGGGATGACGTGCG...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATGCTGGACCACACATTaGCTGGGATCCCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPCWTTH*LGSLVD
Trigger: GTCCACCAGGGATCCCAGGCAATGTGTGGTCCAGCA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGTGCCTGACACCGACTaGGAGCTCGCTGTCACAATT +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRVPDTD*ELAVTI
Trigger: AATTGTGACAGCGAGCTCCCAGTCGGTGTCAGGCAC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCCATGGGAGGGAAGGTTaGCATCCAGGATCGTTGCAT +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASHGREG*HPGSLH
Trigger: ATGCAACGATCCTGGATGCCAACCTTCCCTCCCATG...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTGTGGAGGACCACACATaGGAGGGAAGGTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPVEDHT*EGRLAS
Trigger: GGATGCCAACCTTCCCTCCCATGTGTGGTCCTCCAC...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCACCCCGCGGGCAGGGTaGAGGACCACACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISTPRAG*RTTHGR
Trigger: CCTCCCATGTGTGGTCCTCCACCCTGCCCGCGGGGT...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAGTCCAGGGTGCAAAGTaGGTGAGCAGGACGCCATGT +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAEVQGAK*VSRTPC
Trigger: ACATGGCGTCCTGCTCACCCACTTTGCACCCTGGAC...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCTCACCCCATATGCTGTaGAAGTGGTGGTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASSPHML*KWWWCH
Trigger: ATGGCACCACCACCACTTCCACAGCATATGGGGTGA...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AGCAGCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTGCAGGCGGCGGAGGTaGAAACGCCAGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: SSSISFLAGVLSFSRIRNCRRRR*KRQCSQ
Trigger: CTGTGAACACTGGCGTTTCCACCTCCGCCGCCTGCA...GTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAAGCCGCTGGAACCTTTaGGACCCACAGAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPSRWNL*DPQNLG
Trigger: TCCCAGGTTCTGTGGGTCCCAAAGGTTCCAGCGGCT...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGGTCCTTTCTCACCCTaGTCACCTTTGGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRGPFSP*SPLGPG
Trigger: ACCAGGACCCAAAGGTGACCAGGGTGAGAAAGGACC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGATTCACCTTTTATTCCTaGTCGGCCAGGGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRFTFYS*SARGTG
Trigger: CCCGGTACCCCTGGCCGACCAGGAATAAAAGGTGAA...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTGGGCCGGCAGGGCCTaGGGCACCTGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYWAGRA*GTWRSW
Trigger: CCAGGACCTCCAGGTGCCCCAGGCCCTGCCGGCCCA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGAACTTCTTGATGTCCTaGGAGACCAGCTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMNFLMS*ETSWAG
Trigger: GCCGGCCCAGCTGGTCTCCCAGGACATCAAGAAGTT...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCTGGGCCTGGTGGGCCTaGCAAACCCTCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISWAWWA*QTLPWW
Trigger: CCACCAGGGGAGGGTTTGCCAGGCCCACCAGGCCCA...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGACACCTGGATCACCTTaGTCTCCCTTGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWTPGSP*SPLGPG
Trigger: CCCAGGTCCCAAGGGAGACCAAGGTGATCCAGGTGT...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369733.8
CDS-3UTR CCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATTGGCCCAGGCTGGCCTaGTGGGCCCTGGACAGTGTA +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYWPRLA*WALDSV
Trigger: TACACTGTCCAGGGCCCACCAGGCCAGCCTGGGCCA...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAGGAGCTGTCCTGCCATaGCTAGCTCACGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPGAVLP*LAHGLT
Trigger: TGTCAAGCCGTGAGCTAGCCATGGCAGGACAGCTCC...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp ATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCTCTGAGTTCTCCCTGTaGTTGAAGGCAGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: MLAGEAVKTFPLSLVMMSSEFSL*LKAGSV
Trigger: CACAGAACCTGCCTTCAACCACAGGGAGAACTCAGA...GCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGGGCCTGGGGGACCTTaGTCTCCCTTGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPGPGGP*SPLGPG
Trigger: CCCAGGTCCCAAGGGAGACCAAGGTCCCCCAGGCCC...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR TCA 90 bp TCATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGATCACTCTCTCGTGTTTaGCTCCGTCCTCTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSNSVHRVDGDALCSRTRSLSRV*LRPLVE
Trigger: TTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGA...TCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR TCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAAGGGTGCAAAGTGGGTaGGCAGGACGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAERVQSG*AGRHVV
Trigger: AACAACATGGCGTCCTGCTCACCCACTTTGCACCCT...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGAGGGTGCAAAGTGGGTaGGCAGGACGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMRVQSG*AGRHVV
Trigger: AACAACATGGCGTCCTGCTCACCCACTTTGCACCCT...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAGACAGTGAGCATCGATaGCCCCTCCGAAGTCACGAT +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPDSEHR*PLRSHD
Trigger: ATCGTGACTTCGGAGGGGTCATCGATGCTCACTGTC...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAGGGCCTGGGATGAATaGCAAGCCGGCAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYRAWDE*QAGSSQ
Trigger: CTGCGAGCTGCCGGCTTGTCATTCATCCCAGGCCCT...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369733.8
CDS-3UTR TCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATCAGAGAAGACCTTGCTaGTGCCGGGTGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYQRRPC*CRVAPV
Trigger: CACAGGGGCCACCCGGCATCAGCAAGGTCTTCTCTG...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCGTCTCAGTAGGACATTaGCAGACTCCAGCTTTCACC +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASVSVGH*QTPAFT
Trigger: GGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGAC...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTAGGGGAGGAAGGAGCTaGTGGCACAGCCTTAGAACA +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPRGGRS*WHSLRT
Trigger: TGTTCTAAGGCTGTGCCATCAGCTCCTTCCTCCCCT...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTGTGCAGAATGGAGGGTaGCGTCTTGAGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPVQNGG*RLELML
Trigger: CAGCATCAGCTCAAGACGTCACCCTCCATTCTGCAC...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TGGGATCCTGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGAAATGTGGCCTGGCTaGAGTCAAGGTGGACAACAA +
Preference number: 4 (lower is better)
Translates to: WDPAFITHSQVWLMLLAREMWPG*SQGGQQ
Trigger: TTGTTGTCCACCTTGACTTCAGCCAGGCCACATTTC...ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp AGCAGCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACCCTCTGCTTCTGAGCTaGGGAGGATGTGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSSISFLAGVLSFSRIRNPLLLS*GGCAES
Trigger: GGACTCAGCACATCCTCCTCAGCTCAGAAGCAGAGG...GTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR TCA 90 bp GCAGCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTCTGTGCCTCTGCTTCTaGGCTGAGGAGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: AAPSPSWQVCCLSLGSGTLCLCF*AEEDVL
Trigger: CAGCACATCCTCCTCAGCTCAGAAGCAGAGGCACAG...AGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR TCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGTCCAACGATGCCTCTaGATTCAGACCCTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMVQRCL*IQTLAA
Trigger: TGCTGCGAGGGTCTGAATTCAGAGGCATCGTTGGAC...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR GCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCGTAGCTGTGGATATCTaGAGTGGTGGTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASVAVDI*SGGLAL
Trigger: AAGGGCAAGACCACCACTGCAGATATCCACAGCTAC...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCACACCACCACCACTGCTaGCGTAGCTGTGGATATCTG +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPHHHHC*RSCGYL
Trigger: CAGATATCCACAGCTACGGCAGCAGTGGTGGTGGTG...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGTGCCACCACCACCACTaGTGCCGTAGCTGTGGATAT +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMCHHHH*CRSCGY
Trigger: ATATCCACAGCTACGGCAGCAGTGGTGGTGGTGGCA...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGCCGCCTTCTGCTGCTaGCCCATAGCCTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIAAFCC*PIASAW
Trigger: CCAGGCGGAGGCTATGGGGCAGCAGCAGAAGGCGGC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp AACACCAGAGCTTGGGCACAGGAAGCAGGGATCTCCCAGTACCCTCTTCAGCAGGACCTAAGTGCCACATaGATTATGAGACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: NTRAWAQEAGISQYPLQQDLSAT*IMRPGP
Trigger: TGGACCAGGTCTCATAATGCATGTGGCACTTAGGTC...CTGCTGAAGAGGGTACTGGGAGATCCCTGCTTCCTGTGCCCAAGCTCTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR GCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTTGGTTAAAGACCAACTaGGCCCAGTCCCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPWLKTN*AQSPKC
Trigger: GCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGTTAAAGACCAACTaGGCCCAGTCCCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAEWLKTN*AQSPKC
Trigger: GCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATGGTTAAAGACCAACTaGGCCCAGTCCCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPWLKTN*AQSPKC
Trigger: GCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTTCAGCAGGAGCACAGTaGCCTCCGAGTGTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPSAGAQ*PPSVKL
Trigger: GAGTTTGACACTCGGAGGGCACTGTGCTCCTGCTGA...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAATTCTGTCCATCGGGTaGATGGGGACGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPILSIG*MGTHSA
Trigger: TGCAGAGTGCGTCCCCATCCACCCGATGGACAGAAT...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGACAGGGTGGTCAAGCTaGGGGCCAGATTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMTGWSS*GPDCSA
Trigger: TGCAGAACAATCTGGCCCCCAGCTTGACCACCCTGT...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTTTCATATGCTGTGGAAGTaGTGGTGGTGCCATGGGACA +
Preference number: 4 (lower is better)
Translates to: FITHSQVWLMLLARGPHFHMLWK*WWCHGT
Trigger: TGTCCCATGGCACCACCACCACTTCCACAGCATATG...AAAGTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACACGCTCTGCACACTTGTaGTGCAGGCGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITRSAHL*CRRRRW
Trigger: CCACCTCCGCCGCCTGCACCACAAGTGTGCAGAGCG...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATGGTCCTTGTGGACCTaGGTGGCCCAAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITWSLWT*VAQGPR
Trigger: CCTGGGCCCTTGGGCCACCCAGGTCCACAAGGACCA...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGAGACCTACAGGACCTaGAGGGCCCTGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISETYRT*RALWAR
Trigger: CCTGGCCCACAGGGCCCTCCAGGTCCTGTAGGTCTC...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCTCCTGGTGGTCCCATTaGTCCTTTGTCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASSWWSH*SFVTFD
Trigger: GTCAAAGGTGACAAAGGACCAATGGGACCACCAGGA...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGTCACCTTTGGGTCCTaGTGGTCCCATTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRVTFGS*WSHWSF
Trigger: AAAGGACCAATGGGACCACCAGGACCCAAAGGTGAC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTGGAATGGAAGGCCCTaGTGGCCCGCGTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNWNGRP*WPAWAG
Trigger: CCCGGCCCACGCGGGCCACCAGGGCCTTCCATTCCA...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATGGGCCTCGGGGTCCTaGTGGGCCTGGAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITWASGS*WAWNGR
Trigger: CCTTCCATTCCAGGCCCACCAGGACCCCGAGGCCCA...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTAGCCCCTGGAACACCTaGATCACCTTGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPSPWNT*ITLVSL
Trigger: AAGGGAGACCAAGGTGATCCAGGTGTTCCAGGGGCT...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369733.8
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATGTGGGAGGCATCCGTaGACAGGAGGCGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITCGRHP*TGGGCP
Trigger: GGGACAGCCGCCTCCTGTCCACGGATGCCTCCCACA...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
3UTR CAA 72 bp TTCCGGGTGGGGCTCACACTTGCCGATCGACTCCCCTaGAGCAAACGCTTAACATCATCCAATTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FRVGLTLADRLP*SKRLTSSNSVH
Trigger: ATGGACAGAATTGGATGATGTTAAGCGTTTGCTCAAGGGGAGTCGATCGGCAAGTGTGAGCCCCACCCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR TCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCAGAGTGGAGGCAGGTaGGTGAGCCCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHQSGGR*VSPPVT
Trigger: AGTTACAGGAGGGCTCACTCACCTGCCTCCACTCTG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAAGCATGGCGGGTAACGTaGGTTTTCCTTTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: HPILSIGWMGTHSAVELEAWRVT*VFLSKV
Trigger: AACCTTTGAAAGGAAAACTCACGTTACCCGCCATGC...TTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR TCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTGGTGTTGAGGAGGGATaGGCTCTGGGTTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPGVEEG*ALGCHV
Trigger: AACATGACAACCCAGAGCTCATCCCTCCTCAACACC...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTGGAGTAGCAGCCAGGTaGGCAGCAGGCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSGVAAR*AAGPAA
Trigger: GGCTGCTGGGCCTGCTGCTCACCTGGCTGCTACTCC...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCTGCCAGGCTCGCCTGTaGGGCCTCGAGGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISCQARL*GLEVLS
Trigger: AGAAAGGACCTCGAGGCCTCACAGGCGAGCCTGGCA...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGTGGCTTGCCAGCTCTaGGTAGTCGAAAGTCTCGCC +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHVACQL*VVESLA
Trigger: GGCGAGACTTTCGACTACTCAGAGCTGGCAAGCCAC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCCAGAGAAGACCTTGCTaGTGCCGGGTGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISQRRPC*CRVAPV
Trigger: CACAGGGGCCACCCGGCATCAGCAAGGTCTTCTCTG...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATTTGGAAGAAGTCCATaGGGTCCGCAGTCACGTTGC +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPFGRSP*GPQSRC
Trigger: GCAACGTGACTGCGGACCTCATGGACTTCTTCCAAA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTGGAGGGTGACGTCTTaGGCTGATGCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHWRVTS*ADAVSP
Trigger: TGGGGACACAGCATCAGCTCAAGACGTCACCCTCCA...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACATTGAACTGCAGCTTCTaGCTCAGCAGATCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTLNCSF*LSRSEL
Trigger: TAGCTCAGATCTGCTGAGTCAGAAGCTGCAGTTCAA...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp TGGGATCCTGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTAGGCATGGCCTCGTGTaGTTCCAGTTGAGTTTATGT +
Preference number: 4 (lower is better)
Translates to: WDPAFITHSQVWLMLLARRHGLV*FQLSLC
Trigger: ACATAAACTCAACTGGAAGCACACGAGGCCATGCCT...ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp TTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTTTGATGGGGACGCACTCTaGAGTCGAACTCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: FITHSQVWLMLLARGPHFDGDAL*SRTRIS
Trigger: TGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATC...AAAGTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp ATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATGATGGGGACGCACTCTaGAGTCGAACTCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: IQFCPSGGWGRTLQSNSNDGDAL*SRTRIS
Trigger: TGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATC...ATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR GCA 90 bp CTCGAATTTCACTCTCTCGTGTTTGACTCCGTCCTCTGGTTGAAGAAGATGCATGGTGGGGCTCACACTTaGCGATCGACTCCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LEFHSLVFDSVLWLKKMHGGAHT*RSTPLE
Trigger: CTCAAGGGGAGTCGATCGGCAAGTGTGAGCCCCACC...ATGCATCTTCTTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGAAATTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR GCA 90 bp CCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTCCTTGTGTGCTGAGTCCAGGGTaGAAAGTGGGTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PSWQVCCLSLGSGTCSPCVLSPG*KVGEQD
Trigger: GTCCTGCTCACCCACTTTGCACCCTGGACTCAGCAC...ACAAGGACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR GCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTGGGGCCAGATTGTTCTaGATGCCAAACACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPGARLF*MPNTEE
Trigger: CTCCTCAGTGTTTGGCATGCAGAACAATCTGGCCCC...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGGATCCTGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTAACTTGCAGTCCTTGTaGAAAAGGTCATCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WDPAFITHSQVWLMLLARNLQSL*KRSSLC
Trigger: GCAGAGCGATGACCTTTTGCACAAGGACTGCAAGTT...ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCTGCAGTGGTGGTCTTaGCCTTTGTGGACACAGTCT +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWLQWWS*PLWTQS
Trigger: AGACTGTGTCCACAAAGGGCAAGACCACCACTGCAG...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACCCGCCGCGGGTGCCATaGCCTGGAGGCGGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNPPRVP*PGGGPF
Trigger: AAAAGGACCGCCTCCAGGGCATGGCACCCGCGGCGG...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACCGCCGCGGGTGCCATaGCCTGGAGGCGGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATPPRVP*PGGGPF
Trigger: AAAAGGACCGCCTCCAGGGCATGGCACCCGCGGCGG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCCCATGGGGCCTTCCATaGCAGGATCTCCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISPWGLP*QDLPRC
Trigger: GCAGCGTGGGAGATCCTGGCATGGAAGGCCCCATGG...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAGCCAGCAGGACCCATTaGTCCTTTAGCCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITASRTH*SFSPGL
Trigger: GAGCCCGGGGCTAAAGGAGCAATGGGTCCTGCTGGC...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAGCCGCCTTCTGCTGCTaGCCCATAGCCTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATAAFCC*PIASAW
Trigger: CCAGGCGGAGGCTATGGGGCAGCAGCAGAAGGCGGC...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGGCCCTGACGCTGCATaGTCTCTGACACCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYGPDAA*SLTPSQ
Trigger: CTGTGAGGGTGTCAGAGAGCATGCAGCGTCAGGGCC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAGCCCAGTCCCCCAAGTaGCATTTTCTGAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPAQSPK*HFLSAE
Trigger: TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGC...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGGCCCAGTCCCCCAAGTaGCATTTTCTGAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWAQSPK*HFLSAE
Trigger: TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGC...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATTGTCCATCGGGTGGATaGGGACGCACTCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYCPSGG*GRTLQS
Trigger: CGACTGCAGAGTGCGTCCCCATCCACCCGATGGACA...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTGGAGGAATTCCGGGTaGGGCTCACACTTGCCGATC +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHWRNSG*GSHLPI
Trigger: GATCGGCAAGTGTGAGCCCCACCCGGAATTCCTCCA...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATTTCACTCTCTCGTGTTTTGCCTTTCTTGGGGATaGGGAGTGTGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GWMGTHSAVELEFHSLVFCLSWG*GVCWRN
Trigger: ATTCCTCCAACACACTCCCCATCCCCAAGAAAGGCA...AAACACGAGAGAGTGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGCATGGGAGGGAAGGTTaGCATCCAGGATCGTTGCAT +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMHGREG*HPGSLH
Trigger: ATGCAACGATCCTGGATGCCAACCTTCCCTCCCATG...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTGTCCAGGGTGCAAAGTaGGTGAGCAGGACGCCATGT +
Preference number: 4 (lower is better)
Translates to: PSPSWQVCCLSLGSGTCSVQGAK*VSRTPC
Trigger: ACATGGCGTCCTGCTCACCCACTTTGCACCCTGGAC...ACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp GCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCACAGGGTGGTCAAGCTaGGGGCCAGATTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: APSPSWQVCCLSLGSGTCTGWSS*GPDCSA
Trigger: TGCAGAACAATCTGGCCCCCAGCTTGACCACCCTGT...GCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp GCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCTGTGGAAGTGGTGGTaGTGCCATGGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AFVDMAEAGFCFSNANANLWKWW*CHGTGW
Trigger: CCACCCTGTCCCATGGCACCACCACCACTTCCACAG...ATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGACAGCCGCAGGACTCTaGGGCATGTTTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMTAAGL*GMFFFT
Trigger: GGTGAAGAAAAACATGCCCCAGAGTCCTGCGGCTGT...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGACAGCCGCAGGACTCTaGGGCATGTTTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWTAAGL*GMFFFT
Trigger: GGTGAAGAAAAACATGCCCCAGAGTCCTGCGGCTGT...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGTGCAGGCGGCGGAGGTaGAAACGCCAGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLCRRRR*KRQCSQ
Trigger: CTGTGAACACTGGCGTTTCCACCTCCGCCGCCTGCA...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp AGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCAGCTCCATGCTCCATCTCCTTCTTaGCAGGTGTGTTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RGGCKDLPAVLGHDEQLHAPSPS*QVCCLS
Trigger: AGAAAGACAACACACCTGCCAAGAAGGAGATGGAGC...ATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGGCCTTTTTGACCCTTTaGTCCTTGTGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWAFLTL*SLWTWV
Trigger: CACCCAGGTCCACAAGGACCAAAGGGTCAAAAAGGC...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGGGACCCACAGAACCTaGGACACCAGGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISGTHRT*DTRWAM
Trigger: CATGGCCCACCTGGTGTCCCAGGTTCTGTGGGTCCC...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGGCCAGGAGAGCCGCTaGAACCTTTGGGACCCACAG +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISGQESR*NLWDPQ
Trigger: CTGTGGGTCCCAAAGGTTCCAGCGGCTCTCCTGGCC...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAGCCTTGGTGTCCGTCTaGGCCAGCAGGACCCATTGC +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITALVSV*ASRTHC
Trigger: GCAATGGGTCCTGCTGGCCCAGACGGACACCAAGGC...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACTGGTGGGCCTGGAATaGAAGGCCCTGGTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATLVGLE*KALVAR
Trigger: GCGGGCCACCAGGGCCTTCCATTCCAGGCCCACCAG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACAAACCCTCCCCTGGTaGGCCTCGGGGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATQTLPW*ASGSWW
Trigger: CCACCAGGACCCCGAGGCCCACCAGGGGAGGGTTTG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGGAAGGTTTCTGAGTTaGACAGGAACGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRGRFLS*TGTILV
Trigger: CACCAGGATCGTTCCTGTCCAACTCAGAAACCTTCC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAAATGCCAAGAGCCCCTaGAACACCTGGATCACCTTG +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAENAKSP*NTWITL
Trigger: CAAGGTGATCCAGGTGTTCCAGGGGCTCTTGGCATT...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369733.8
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGGCCTGACACGTACATaGTACTTGATGATCCCCCTT +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRGLTRT*YLMIPL
Trigger: AAGGGGGATCATCAAGTACCATGTACGTGTCAGGCC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAGGTGGTGACAGGTCCTaGGGGACCAGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRGGDRS*GTRWAW
Trigger: CCAGGCCCACCTGGTCCCCCAGGACCTGTCACCACC...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATATCTCCACTGGCTCCTaGTGGCCCTGGCGGACCCCG +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYISTGS*WPWRTP
Trigger: CGGGGTCCGCCAGGGCCACCAGGAGCCAGTGGAGAT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAATCTCCACTGGCTCCTaGTGGCCCTGGCGGACCCCG +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRISTGS*WPWRTP
Trigger: CGGGGTCCGCCAGGGCCACCAGGAGCCAGTGGAGAT...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCCAGGCTGGCCTGGTaGGCCCTGGACAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYPRLAW*ALDSVG
Trigger: GCCTACACTGTCCAGGGCCCACCAGGCCAGCCTGGG...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGACCCAGGCTGGCCTGGTaGGCCCTGGACAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRPRLAW*ALDSVG
Trigger: GCCTACACTGTCCAGGGCCCACCAGGCCAGCCTGGG...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATTCCACTGTGTGACTaGCACAGGTCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRIPLCD*HRSLPA
Trigger: AGCAGGAAGAGACCTGTGCCAGTCACACAGTGGAAT...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAGCCAGGTGGGCCTGGTaGTCCCTGAAGGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITARWAW*SLKVES
Trigger: GGACTCAACCTTCAGGGACCACCAGGCCCACCTGGC...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGGACCCGGGGGACCTaGGGGTCCAACGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIWTRGT*GSNDAS
Trigger: AGAGGCATCGTTGGACCCCCAGGTCCCCCGGGTCCA...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR TCA 90 bp GCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCAGAGTGGAGGCAGGTaGGTGAGCCCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: AFVDMAEAGFCFSNANANQSGGR*VSPPVT
Trigger: AGTTACAGGAGGGCTCACTCACCTGCCTCCACTCTG...ATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGACTGAGGAGGATGTGCTaGGTCCAGGGTGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: DMAEAGFCFSNANANHLGLRRMC*VQGAKW
Trigger: CCACTTTGCACCCTGGACTCAGCACATCCTCCTCAG...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAACGCTGCATGCTCTCTaGCACCCTCACAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITTLHAL*HPHSQL
Trigger: GAGCTGGCTGTGAGGGTGTCAGAGAGCATGCAGCGT...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAGTCTCAGTAGGACATTaGCAGACTCCAGCTTTCACC +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPVSVGH*QTPAFT
Trigger: GGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGAC...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGTGCAGAATGGAGGGTaGCGTCTTGAGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHVQNGG*RLELML
Trigger: CAGCATCAGCTCAAGACGTCACCCTCCATTCTGCAC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp CATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATTTCACTCTCTCGTACGAGCAAAGGCTTATaGCAGCAAGTTAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: HRVDGDALCSRTRISLSRTSKGL*QQVNVA
Trigger: AGCCACATTAACTTGCTGTCATAAGCCTTTGCTCGT...ACGAGAGAGTGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR GCA 90 bp ATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATAGGCATGGCCTCGTGTaGTTCCAGTTGAGTTTATGT +
Preference number: 4 (lower is better)
Translates to: IQFCPSGGWGRTLQSNSNRHGLV*FQLSLC
Trigger: ACATAAACTCAACTGGAAGCACACGAGGCCATGCCT...ATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR GCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGGTGGGGCTCACACTTaGCGATCGACTCCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPGGAHT*RSTPLE
Trigger: CTCAAGGGGAGTCGATCGGCAAGTGTGAGCCCCACC...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp AATGCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCATCGTTGCATCGTAGGTaGCTGACACCGACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NAFVDMAEAGFCFSNANASLHRR*LTPTGS
Trigger: GCTCCCAGTCGGTGTCAGGCACCTACGATGCAACGA...TGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGTGCTGAGTCCAGGGTaGAAAGTGGGTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYVLSPG*KVGEQD
Trigger: GTCCTGCTCACCCACTTTGCACCCTGGACTCAGCAC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAGTGCTGAGTCCAGGGTaGAAAGTGGGTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: DMAEAGFCFSNANANHLGVLSPG*KVGEQD
Trigger: GTCCTGCTCACCCACTTTGCACCCTGGACTCAGCAC...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGATGGAAGTGGTGGTGGTaGCATGGGACAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: DMAEAGFCFSNANANHLGWKWWW*HGTGWS
Trigger: TGACCACCCTGTCCCATGGCACCACCACCACTTCCA...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATTCTGCACACTTGTGGTaGAGGCGGCGGAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYSAHLW*RRRRWK
Trigger: TTTCCACCTCCGCCGCCTGCACCACAAGTGTGCAGA...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGTCTGCACACTTGTGGTaGAGGCGGCGGAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLSAHLW*RRRRWK
Trigger: TTTCCACCTCCGCCGCCTGCACCACAAGTGTGCAGA...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAACTTGCAGTCCTTGTaGAAAAGGTCATCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRNLQSL*KRSSLC
Trigger: GCAGAGCGATGACCTTTTGCACAAGGACTGCAAGTT...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp AGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCAGCTCCATCTAGGATCAGGAACTTaGAGTCCTTGTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: RGGCKDLPAVLGHDEQLHLGSGT*SPCAKG
Trigger: ACCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAG...ATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAATTTTGTCCAGGTCTaGTCCCGCCGCGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYNFVQV*SRRGCH
Trigger: ATGGCACCCGCGGCGGGAGCAGACCTGGACAAAATT...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGGCGACTACTCAGCTCTaGATAGTCCAAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWATTQL*IVQRQE
Trigger: CTCCTGTCTTTGGACTATGCAGAGCTGAGTAGTCGC...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAGGGACCCCTGTCTCCTaGAGCTTCACCAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITGTPVS*SFTKGT
Trigger: GGTGCCTTTGGTGAAGCTGCAGGAGACAGGGGTCCC...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGGGACCCCTGTCTCCTaGAGCTTCACCAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISGTPVS*SFTKGT
Trigger: GGTGCCTTTGGTGAAGCTGCAGGAGACAGGGGTCCC...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATCATTGCCAGCATACATaGCGCCTTCTGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYHCQHT*RLLLLP
Trigger: GGGCAGCAGCAGAAGGCGGCATGTATGCTGGCAATG...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCCAACTGACTAGAGAATaGAGAATGAACAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KCHMHYETWSRSCPAMASQLTRE*RMNRGG
Trigger: TCCTCCCCTGTTCATTCTGCATTCTCTAGTCAGTTG...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGCCGTTAAGGCTGCATaGTCTCTGACACCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHAVKAA*SLTPSQ
Trigger: CTGTGAGGGTGTCAGAGAGCATGCAGCCTTAACGGC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTGAGAAGAGTTGCCACTaGAGCTCCCTTCATACGCAT +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPEKSCH*SSLHTH
Trigger: ATGCGTATGAAGGGAGCTCCAGTGGCAACTCTTCTC...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGAGAAGAGTTGCCACTaGAGCTCCCTTCATACGCAT +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMEKSCH*SSLHTH
Trigger: ATGCGTATGAAGGGAGCTCCAGTGGCAACTCTTCTC...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGTGTGATAGGTCCCCATaGAGGACCCCGCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQCDRSP*RTPRAG
Trigger: CCCTGCCCGCGGGGTCCTCCATGGGGACCTATCACA...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGTCCAGGGTGCAAAGTaGGTGAGCAGGACGCCATGT +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYVQGAK*VSRTPC
Trigger: ACATGGCGTCCTGCTCACCCACTTTGCACCCTGGAC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAGTCCAGGGTGCAAAGTaGGTGAGCAGGACGCCATGT +
Preference number: 4 (lower is better)
Translates to: DMAEAGFCFSNANANHLGVQGAK*VSRTPC
Trigger: ACATGGCGTCCTGCTCACCCACTTTGCACCCTGGAC...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCACTGTGGAAGTGGTGGTaGTGCCATGGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPLWKWW*CHGTGW
Trigger: CCACCCTGTCCCATGGCACCACCACCACTTCCACAG...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AGCAGCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTCACCCCATATGCTGTaGAAGTGGTGGTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SSSISFLAGVLSFSRIRNSPHML*KWWWCH
Trigger: ATGGCACCACCACCACTTCCACAGCATATGGGGTGA...GTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGTGGATATCTGCAGTaGTGGTCTTGCCCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAECGYLQ*WSCPLW
Trigger: CCACAAAGGGCAAGACCACCACTGCAGATATCCACA...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAGGGCCCAGGGATACCTaGAGTCCCAGGGAACCCTCG +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRGPRDT*SPREPS
Trigger: CGAGGGTTCCCTGGGACTCCAGGTATCCCTGGGCCC...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACGGGCCCAGGGATACCTaGAGTCCCAGGGAACCCTCG +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNGPRDT*SPREPS
Trigger: CGAGGGTTCCCTGGGACTCCAGGTATCCCTGGGCCC...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTTGGTCCTTGTGGACCTaGGTGGCCCAAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSWSLWT*VAQGPR
Trigger: CCTGGGCCCTTGGGCCACCCAGGTCCACAAGGACCA...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATACACCACGAGGTCCCATaGGGCCTTCTCGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIHHEVP*GLLALS
Trigger: AGAGAGGGCGAGAAGGCCCCATGGGACCTCGTGGTG...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGGGACCCACAGAACCTaGGACACCAGGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIGTHRT*DTRWAM
Trigger: CATGGCCCACCTGGTGTCCCAGGTTCTGTGGGTCCC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTGAGACCTACAGGACCTaGAGGGCCCTGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSETYRT*RALWAR
Trigger: CCTGGCCCACAGGGCCCTCCAGGTCCTGTAGGTCTC...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGTCTCCAGAAGGTCCTaGTGGGCCACGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPVSRRS*WATDSR
Trigger: CCTGGAATCCGTGGCCCACCAGGACCTTCTGGAGAC...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGAGACCTGGCTTTCCTaGGTCTCCAGAAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYETWLS*VSRRSW
Trigger: CCAGGACCTTCTGGAGACCCAGGAAAGCCAGGTCTC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTCACCTTTTATTCCTaGTCGGCCAGGGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHFTFYS*SARGTG
Trigger: CCCGGTACCCCTGGCCGACCAGGAATAAAAGGTGAA...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAAGTCACGATCTTGCCTaGAGCTCCTGGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAESHDLA*SSWFTF
Trigger: AAAGGTGAACCAGGAGCTCCAGGCAAGATCGTGACT...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGGCCTCGGGGTCCTGGTaGGCCTGGAATGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMASGSW*AWNGRP
Trigger: GGGCCTTCCATTCCAGGCCCACCAGGACCCCGAGGC...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGGACAGGAACGATCCTaGTGGGCCTGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYGQERS*WAWWAW
Trigger: CCAGGCCCACCAGGCCCACCAGGATCGTTCCTGTCC...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACCGGCCCAGGAGGGCCTaGGGGGCCAACAATGAAGCT +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNRPRRA*GANNEA
Trigger: AGCTTCATTGTTGGCCCCCCAGGCCCTCCTGGGCCG...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGCGGCCCAGGAGGGCCTaGGGGGCCAACAATGAAGCT +
Preference number: 4 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQRPRRA*GANNEA
Trigger: AGCTTCATTGTTGGCCCCCCAGGCCCTCCTGGGCCG...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATACTGCTACCCCGACTGTaGGAGGCATCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNILLPRL*EASVDR
Trigger: CCTGTCCACGGATGCCTCCCACAGTCGGGGTAGCAG...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACACCCATAGCCTCCGCCTaGGCCGATGTCAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITPIASA*ADVSAI
Trigger: TATGGCACTGACATCGGCCCAGGCGGAGGCTATGGG...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp ACTCCCAAAGCAGTTGAACTAGATCAAGCCGCAGCAAGGGTGAAGCCCTCCAACCAGGGGGTCCTTGAATaGCTCCATAAGTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPKAVELDQAAARVKPSNQGVLE*LHKFGR
Trigger: TCTTCCAAACTTATGGAGCCATTCAAGGACCCCCTG...GTTGGAGGGCTTCACCCTTGCTGCGGCTTGATCTAGTTCAACTGCTTTGGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CCA 90 bp GCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACCATACCATAGCCACCTaGTTTGAGGTTTTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: AFITHSQVWLMLLARGPHHTIAT*FEVLKE
Trigger: TTCCTTCAAAACCTCAAACCAGGTGGCTATGGTATG...GTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGAGTAGGCATTGGTGTTaGGGAGGGATGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLSRHWC*GGMSSG
Trigger: CCCAGAGCTCATCCCTCCTCAACACCAATGCCTACT...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp GCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATAGGGTGCAAAGTGGGTaGGCAGGACGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: AFVDMAEAGFCFSNANANRVQSG*AGRHVV
Trigger: AACAACATGGCGTCCTGCTCACCCACTTTGCACCCT...ATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACACTGAGGAGGATGTGCTaGGTCCAGGGTGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITLRRMC*VQGAKW
Trigger: CCACTTTGCACCCTGGACTCAGCACATCCTCCTCAG...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TGCAAATGCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTGACTCAGCAGCCGTGGACCACACTTTaGGTAGCAAGGTCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: CKCKSPRKLVELQLLTQQPWTTL*VARSPK
Trigger: CTTCGGAGACCTTGCTACTCAAAGTGTGGTCCACGG...CTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGCATTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp GCAGCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTTTTCCCTTGGGGTCTaGGTTCTCCCTGTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: AAPSPSWQVCCLSLGSGTFSLGV*VLPVVE
Trigger: TTCAACCACAGGGAGAACTCAGACCCCAAGGGAAAA...AGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR GCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGTTATGTAGCCGCTGCTaGCATGAGTCAGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWLCSRC*HESGFV
Trigger: AACAAAGCCTGACTCATGGCAGCAGCGGCTACATAA...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGTGCTGAGTCCAGGGTaGAAAGTGGGTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISVLSPG*KVGEQD
Trigger: GTCCTGCTCACCCACTTTGCACCCTGGACTCAGCAC...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGGAAGTGGTGGTGGTaGCATGGGACAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPWKWWW*HGTGWS
Trigger: TGACCACCCTGTCCCATGGCACCACCACCACTTCCA...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTGCCAGCAGGACCCATTaGTCCTTTAGCCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSASRTH*SFSPGL
Trigger: GAGCCCGGGGCTAAAGGAGCAATGGGTCCTGCTGGC...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCACATTGCCAGCATACATaGCGCCTTCTGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPHCQHT*RLLLLP
Trigger: GGGCAGCAGCAGAAGGCGGCATGTATGCTGGCAATG...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCCAATAGTCCGCCATTaGCAGCATACATGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHPIVRH*QHTCRL
Trigger: AAGGCGGCATGTATGCTGGCAATGGCGGACTATTGG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGCACAGGTCTCTTCCTaGTGTGGGCCGGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYAQVSS*CGPASK
Trigger: TTTTGATGCCGGCCCACAGCAGGAAGAGACCTGTGC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGCTAGAGGTGGAGGCATaGCCTCGTGTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLLEVEA*PRVLPV
Trigger: AACTGGAAGCACACGAGGCCATGCCTCCACCTCTAG...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp CGACTCCCCTTGAGCAAACGCTTAACATCATCCAATTCTGTCCATCGGGTGGATGAGAAGAGTTGCCACTaGAGCTCCCTTCATACGCAT +
Preference number: 4 (lower is better)
Translates to: RLPLSKRLTSSNSVHRVDEKSCH*SSLHTH
Trigger: ATGCGTATGAAGGGAGCTCCAGTGGCAACTCTTCTC...ATCCACCCGATGGACAGAATTGGATGATGTTAAGCGTTTGCTCAAGGGGAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CCA 90 bp GCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTTTGACTCCGTCCTCTaGTTGAAGAAGATGCAAATT +
Preference number: 4 (lower is better)
Translates to: AFITHSQVWLMLLARGPHFDSVL*LKKMQI
Trigger: AATTTGCATCTTCTTCAACCAGAGGACGGAGTCAAA...GTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TGCAAATGCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTGACTCAGCAGATTCTGTCCATCGGGTaGATGGGGACGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: CKCKSPRKLVELQLLTQQILSIG*MGTHSA
Trigger: TGCAGAGTGCGTCCCCATCCACCCGATGGACAGAAT...CTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGCATTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATGGAGGAATTCCGGGTaGGGCTCACACTTGCCGATC +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITWRNSG*GSHLPI
Trigger: GATCGGCAAGTGTGAGCCCCACCCGGAATTCCTCCA...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGGTGCCTGACACCGACTaGGAGCTCGCTGTCACAATT +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLVPDTD*ELAVTI
Trigger: AATTGTGACAGCGAGCTCCCAGTCGGTGTCAGGCAC...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TGCAAATGCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTGACTCAGCAGACAGGGTGGTCAAGCTaGGGGCCAGATTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CKCKSPRKLVELQLLTQQTGWSS*GPDCSA
Trigger: TGCAGAACAATCTGGCCCCCAGCTTGACCACCCTGT...CTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGCATTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGTGGTGGTGGTGCCATaGGACAGGGTGGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIVVVVP*DRVVKL
Trigger: CAGCTTGACCACCCTGTCCCATGGCACCACCACCAC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCATATGCTGTGGAAGTaGTGGTGGTGCCATGGGACA +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHHMLWK*WWCHGT
Trigger: TGTCCCATGGCACCACCACCACTTCCACAGCATATG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGCGCTCTGCACACTTGTaGTGCAGGCGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMRSAHL*CRRRRW
Trigger: CCACCTCCGCCGCCTGCACCACAAGTGTGCAGAGCG...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCTCCATCTCCTTCTTaGCAGGTGTGTTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMAPSPS*QVCCLS
Trigger: AGAAAGACAACACACCTGCCAAGAAGGAGATGGAGC...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGCGGGTGCCATGCCCTaGAGGCGGTCCTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPAGAMP*RRSFSI
Trigger: AATAGAAAAGGACCGCCTCCAGGGCATGGCACCCGC...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAATCTCCTTTAGGGCCTaGACTTCCCATGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPISFRA*TSHVTF
Trigger: AAAGGTGACATGGGAAGTCCAGGCCCTAAAGGAGAT...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTCCTTCTCGCCCTCTCTaGCCCATGGGGCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSPSRPL*PMGPSM
Trigger: CATGGAAGGCCCCATGGGCCAGAGAGGGCGAGAAGG...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAGGCCAGGAGAGCCGCTaGAACCTTTGGGACCCACAG +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRGQESR*NLWDPQ
Trigger: CTGTGGGTCCCAAAGGTTCCAGCGGCTCTCCTGGCC...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATCACCTCGGAGCCCTTaGAGACCTACAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITSPRSP*RPTGPG
Trigger: TCCAGGTCCTGTAGGTCTCCAAGGGCTCCGAGGTGA...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATACCTTTGGGTCCTGGTaGTCCCATTGGTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHTFGSW*SHWSFV
Trigger: GACAAAGGACCAATGGGACCACCAGGACCCAAAGGT...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGTCTCCAGAAGGTCCTaGTGGGCCACGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIVSRRS*WATDSR
Trigger: CCTGGAATCCGTGGCCCACCAGGACCTTCTGGAGAC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCTGGTGGGCCTGGAATaGAAGGCCCTGGTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSLVGLE*KALVAR
Trigger: GCGGGCCACCAGGGCCTTCCATTCCAGGCCCACCAG...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACCAGGAACGATCCTGGTaGGCCTGGTGGGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNQERSW*AWWAWQ
Trigger: TTGCCAGGCCCACCAGGCCCACCAGGATCGTTCCTG...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACTGCTACCCCGACTGTaGGAGGCATCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATLLPRL*EASVDR
Trigger: CCTGTCCACGGATGCCTCCCACAGTCGGGGTAGCAG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGGAGCTGTCCTGCCATaGCTAGCTCACGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPGAVLP*LAHGLT
Trigger: TGTCAAGCCGTGAGCTAGCCATGGCAGGACAGCTCC...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAACTCTAGTATGGGCCTaGTCCAGGAGCTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITTLVWA*SRSCPA
Trigger: GGCAGGACAGCTCCTGGACCAGGCCCATACTAGAGT...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433822.1
CDS-3UTR CCA 90 bp AGCAGCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACCTGAGACTTTTCCCTTaGGGTCTGAGTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSSISFLAGVLSFSRIRNLRLFP*GLSSPC
Trigger: ACAGGGAGAACTCAGACCCCAAGGGAAAAGTCTCAG...GTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAGTGTCCTCTGGGGCCTaGGGGACCTTGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATVSSGA*GTLVSL
Trigger: AAGGGAGACCAAGGTCCCCCAGGCCCCAGAGGACAC...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATACACCTTTGTCACCTTTaGGTCCCTGGGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIHLCHL*VPGGQV
Trigger: CACCTGGCCCCCAGGGACCCAAAGGTGACAAAGGTG...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648076.2
3UTR CAA 72 bp ACATTGACAGACTCCAGCTTTCACCCTCTGGAGACCTaGGACCTAAGTGCCACATGCATTATGAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: TLTDSSFHPLET*DLSATCIMRPG
Trigger: ACCAGGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTGAAAGCTGGAGTCTGTCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TGCAAATGCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTGACTCAGCAGGGTGTTGAGGAGGGATaGGCTCTGGGTTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: CKCKSPRKLVELQLLTQQGVEEG*ALGCHV
Trigger: AACATGACAACCCAGAGCTCATCCCTCCTCAACACC...CTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGCATTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGTAGGCATTGGTGTTaGGGAGGGATGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISSRHWC*GGMSSG
Trigger: CCCAGAGCTCATCCCTCCTCAACACCAATGCCTACT...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATACGCTGCATGCTCTCTaGCACCCTCACAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYTLHAL*HPHSQL
Trigger: GAGCTGGCTGTGAGGGTGTCAGAGAGCATGCAGCGT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATTTTGGAAGAAGTCCATaGGGTCCGCAGTCACGTTGC +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYFGRSP*GPQSRC
Trigger: GCAACGTGACTGCGGACCTCATGGACTTCTTCCAAA...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGTGCCACATGCATTATaGGACCTGGTCCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPVPHAL*DLVQEL
Trigger: CAGCTCCTGGACCAGGTCTCATAATGCATGTGGCAC...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTTTAGAGTCCACCCCATaGAGCTGTTTCAGATTGTGT +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPLESTP*SCFRLC
Trigger: ACACAATCTGAAACAGCTTCATGGGGTGGACTCTAA...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGTTAGAGTCCACCCCATaGAGCTGTTTCAGATTGTGT +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMLESTP*SCFRLC
Trigger: ACACAATCTGAAACAGCTTCATGGGGTGGACTCTAA...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAAGGGGAGGAAGGAGCTaGTGGCACAGCCTTAGAACA +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITRGGRS*WHSLRT
Trigger: TGTTCTAAGGCTGTGCCATCAGCTCCTTCCTCCCCT...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGGAGGGTGACGTCTTaGGCTGATGCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIWRVTS*ADAVSP
Trigger: TGGGGACACAGCATCAGCTCAAGACGTCACCCTCCA...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGACTCCGGAGAAGAGTTaGCACTGGAGCTCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLTPEKS*HWSSLH
Trigger: ATGAAGGGAGCTCCAGTGGCAACTCTTCTCCGGAGT...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAGGGGCCAGATTGTTCTaGATGCCAAACACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DMAEAGFCFSNANANHLGGARLF*MPNTEE
Trigger: CTCCTCAGTGTTTGGCATGCAGAACAATCTGGCCCC...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGGAAGTGGTGGTGGTaGCATGGGACAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIWKWWW*HGTGWS
Trigger: TGACCACCCTGTCCCATGGCACCACCACCACTTCCA...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCTAGGATCAGGAACTTaGAGTCCTTGTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWLGSGT*SPCAKG
Trigger: ACCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAG...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGCGACTACTCAGCTCTaGATAGTCCAAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHATTQL*IVQRQE
Trigger: CTCCTGTCTTTGGACTATGCAGAGCTGAGTAGTCGC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGATGTGTGAGGAGGAGCTaGTACCCCGACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRCVRRS*YPDCGR
Trigger: CCTCCCACAGTCGGGGTAGCAGCTCCTCCTCACACA...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATCTTTGGGTCCTGGAGTaGCCATCTCTCCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYLWVLE*PSLLFA
Trigger: GGCAAAAAGGAGAGATGGGCACTCCAGGACCCAAAG...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGCCCAGTCCCCCAAGTaGCATTTTCTGAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYAQSPK*HFLSAE
Trigger: TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCTGGTTAAAGACCAACTaGGCCCAGTCCCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISWLKTN*AQSPKC
Trigger: GCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp GCAGCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTCCAGATTGTTCTGCATaGCAAACAGTCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: AAPSPSWQVCCLSLGSGTPDCSA*QTVNVG
Trigger: GCCCACATTGACTGTTTGGCATGCAGAACAATCTGG...AGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR GCA 90 bp GCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCGGGGCCAGATTGTTCTaGATGCCAAACAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: APSPSWQVCCLSLGSGTCGARLF*MPNSQC
Trigger: ACATTGACTGTTTGGCATGCAGAACAATCTGGCCCC...GCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR GCA 90 bp CATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAAATAGTCCCCTTAATATaGAAATTCCTTCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: HPILSIGWMGTHSAVELEIVPLI*KFLPRV
Trigger: TACCCTCGGAAGGAATTTGCATATTAAGGGGACTAT...TTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR GCA 90 bp TCACGGCTTGACAGCAATACTTCTTCTCCTTCTCCGCCCAGCATAGACTTGGTCCAAAAGCTTGTTGACTaGGTAACTGTGCCGTTAAGG +
Preference number: 4 (lower is better)
Translates to: SRLDSNTSSPSPPSIDLVQKLVD*VTVPLR
Trigger: CCTTAACGGCACAGTTACGCAGTCAACAAGCTTTTG...GACCAAGTCTATGCTGGGCGGAGAAGGAGAAGAAGTATTGCTGTCAAGCCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACGGATGGGGAGTGTGTTaGAGGAATTCCGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNGWGVC*RNSGWG
Trigger: GCCCCACCCGGAATTCCTCCAACACACTCCCCATCC...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AATGCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCACATGGGAGGGAAGGTTaGCATCCAGGATCGTTGCAT +
Preference number: 4 (lower is better)
Translates to: NAFVDMAEAGFCFSNANAHGREG*HPGSLH
Trigger: ATGCAACGATCCTGGATGCCAACCTTCCCTCCCATG...TGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGTCACCCCATATGCTGTaGAAGTGGTGGTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLSPHML*KWWWCH
Trigger: ATGGCACCACCACCACTTCCACAGCATATGGGGTGA...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGGATATCTGCAGTGGTaGTCTTGCCCTTTGTGGACA +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHGYLQW*SCPLWT
Trigger: TGTCCACAAAGGGCAAGACCACCACTGCAGATATCC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGCCTTGTGGACCTGGGTaGCCCAAGGGCCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMPCGPG*PKGPGI
Trigger: TATCCCTGGGCCCTTGGGCCACCCAGGTCCACAAGG...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAACCCTTTGGTCCTTGTaGACCTGGGTGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATTLWSL*TWVAQG
Trigger: CCCTTGGGCCACCCAGGTCCACAAGGACCAAAGGGT...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAACCTGGGACACCAGGTaGGCCATGAGGACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRTWDTR*AMRTWF
Trigger: GAACCAGGTCCTCATGGCCCACCTGGTGTCCCAGGT...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGATCACCTCTTGGGCCTTaGTGTCCGTCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRSPLGP*CPSGPA
Trigger: TGCTGGCCCAGACGGACACCAAGGCCCAAGAGGTGA...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGGCCTGACACGTACATaGTACTTGATGATCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHGLTRT*YLMIPL
Trigger: AAGGGGGATCATCAAGTACCATGTACGTGTCAGGCC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACACTCCTCCTGTGCTCATaGAAGAGCTGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITLLLCS*KSCRSC
Trigger: GCAGCTCCTACAGCTCTTCCATGAGCACAGGAGGAG...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCCATAGCCTCCGCCTaGGCCGATGTCAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYPIASA*ADVSAI
Trigger: TATGGCACTGACATCGGCCCAGGCGGAGGCTATGGG...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp ACATCATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTTTTGACTCCGTCCTCTaGTTGAAGAAGATGCATTTC +
Preference number: 4 (lower is better)
Translates to: TSSNSVHRVDGDALCSRTFDSVL*LKKMHF
Trigger: GAAATGCATCTTCTTCAACCAGAGGACGGAGTCAAA...AGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR TCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATTTCCTTTCAAAGGTTaGGCCTGGGGAGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPFPFKG*AWGVGQ
Trigger: CTGCCCAACTCCCCAGGCTCAACCTTTGAAAGGAAA...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGATCACTCTCTCGTGTTTaGCTCCGTCCTCTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: DMAEAGFCFSNANANHLGSLSRV*LRPLVE
Trigger: TTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGA...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGCAGTATGCTCCTCCTaGTCCTCTCCAGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIAVCSS*SSPAHP
Trigger: TGGATGAGCTGGAGAGGATCAGGAGGAGCATACTGC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTGTCCCTGGGGTCCTGTaGGACCTGGCTTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSVPGVL*DLAFLG
Trigger: ACCCAGGAAAGCCAGGTCTCACAGGACCCCAGGGAC...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGAGAAGACCTTGCTaGTGCCGGGTGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSQRRPC*CRVAPV
Trigger: CACAGGGGCCACCCGGCATCAGCAAGGTCTTCTCTG...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGGTGACGTCTTGAGCTaGTGCTGTGTCCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYGDVLS*CCVPSI
Trigger: GATGCTGGGGACACAGCATCAGCTCAAGACGTCACC...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTGGAGGGTGACGTCTTaGGCTGATGCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYWRVTS*ADAVSP
Trigger: TGGGGACACAGCATCAGCTCAAGACGTCACCCTCCA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTTGGAGGGTGACGTCTTaGGCTGATGCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSWRVTS*ADAVSP
Trigger: TGGGGACACAGCATCAGCTCAAGACGTCACCCTCCA...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGACCTGGTTTGAGGTTTTaGAGGAATTGGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRPGLRF*RNWKQL
Trigger: AAGTTGTTTCCAATTCCTTCAAAACCTCAAACCAGG...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR TCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGGGCCTGGTGGTCCCTaGAGGTTGAGTCCGAAAGAA +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYGPGGP*RLSPKE
Trigger: TTCTTTCGGACTCAACCTTCAGGGACCACCAGGCCC...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR TCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATAGAGGTCCTCCACGCTaGTGCTGGACCACACATTGC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYRGPPR*CWTTHC
Trigger: GCAATGTGTGGTCCAGCATCAGCGTGGAGGACCTCT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR TCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACTGGAGGGCCTGGGATaGATGACAAGCCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATLEGLG*MTSRQY
Trigger: ATACTGCCGGCTTGTCATTCATCCCAGGCCCTCCAG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR GCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTCGTTGCATCGTAGGTaGCTGACACCGACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYSLHRR*LTPTGS
Trigger: GCTCCCAGTCGGTGTCAGGCACCTACGATGCAACGA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTCCTTGTAACTTGCAGTCCTTGTaGAAAAGGTCATCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSWQVCCLSLGSGTCSPCNLQSL*KRSSLC
Trigger: GCAGAGCGATGACCTTTTGCACAAGGACTGCAAGTT...ACAAGGACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR GCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATAACTTGCAGTCCTTGTaGAAAAGGTCATCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHNLQSL*KRSSLC
Trigger: GCAGAGCGATGACCTTTTGCACAAGGACTGCAAGTT...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACAATTTTGTCCAGGTCTaGTCCCGCCGCGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNNFVQV*SRRGCH
Trigger: ATGGCACCCGCGGCGGGAGCAGACCTGGACAAAATT...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATCCTGGCTGTCACTGTaGAGCCCAATTTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPSWLSL*SPILSR
Trigger: CCTGGACAAAATTGGGCTGCACAGTGACAGCCAGGA...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCCAGGATCTCCCACGCTaGCTTTTTGACCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISQDLPR*LFDPLV
Trigger: GACCAAAGGGTCAAAAAGGCAGCGTGGGAGATCCTG...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCACAGGATCTCCCACGCTaGCTTTTTGACCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPQDLPR*LFDPLV
Trigger: GACCAAAGGGTCAAAAAGGCAGCGTGGGAGATCCTG...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTATACATGCCGCCTTCTaGTGCTGCCCCATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSIHAAF*CCPIAS
Trigger: GGAGGCTATGGGGCAGCAGCAGAAGGCGGCATGTAT...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACATACATGCCGCCTTCTaGTGCTGCCCCATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNIHAAF*CCPIAS
Trigger: GGAGGCTATGGGGCAGCAGCAGAAGGCGGCATGTAT...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATATACATGCCGCCTTCTaGTGCTGCCCCATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYIHAAF*CCPIAS
Trigger: GGAGGCTATGGGGCAGCAGCAGAAGGCGGCATGTAT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACATTGCCAGCATACATaGCGCCTTCTGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATHCQHT*RLLLLP
Trigger: GGGCAGCAGCAGAAGGCGGCATGTATGCTGGCAATG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATCCTTCCTTGTCCATTaGCCTCAACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPSFLVH*PQPSFS
Trigger: AGAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGAAACCTGGGAGGCCTTaGTCGCCTTGGTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQKPGRP*SPWCPL
Trigger: CAGAGGACACCAAGGCGAGCAAGGCCTCCCAGGTTT...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CCA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAGAGAAGAGTTGCCACTaGAGCTCCCTTCATACGCAT +
Preference number: 4 (lower is better)
Translates to: DMAEAGFCFSNANANHLGEKSCH*SSLHTH
Trigger: ATGCGTATGAAGGGAGCTCCAGTGGCAACTCTTCTC...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp GCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATTGCCTTTCTTGGGGATaGGGAGTGTGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: AFVDMAEAGFCFSNANANCLSWG*GVCWRN
Trigger: ATTCCTCCAACACACTCCCCATCCCCAAGAAAGGCA...ATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATCACCCCATATGCTGTaGAAGTGGTGGTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITSPHML*KWWWCH
Trigger: ATGGCACCACCACCACTTCCACAGCATATGGGGTGA...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGCCGCTGGAACCTTTaGGACCCACAGAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSSRWNL*DPQNLG
Trigger: TCCCAGGTTCTGTGGGTCCCAAAGGTTCCAGCGGCT...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACATCACCTCGGAGCCCTTaGAGACCTACAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATSPRSP*RPTGPG
Trigger: TCCAGGTCCTGTAGGTCTCCAAGGGCTCCGAGGTGA...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAGTCACCTTTGGGTCCTaGTGGTCCCATTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITVTFGS*WSHWSF
Trigger: AAAGGACCAATGGGACCACCAGGACCCAAAGGTGAC...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGCACCCTGGTCACCTTTaGGTCCTGGTGGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQHPGHL*VLVVPL
Trigger: CAATGGGACCACCAGGACCCAAAGGTGACCAGGGTG...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGACACCCTGGTCACCTTTaGGTCCTGGTGGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRHPGHL*VLVVPL
Trigger: CAATGGGACCACCAGGACCCAAAGGTGACCAGGGTG...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTCCAGAAGGTCCTGGTaGGCCACGGATTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYSRRSW*ATDSRH
Trigger: ATGCCTGGAATCCGTGGCCCACCAGGACCTTCTGGA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATAACTTCTTGATGTCCTaGGAGACCAGCTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYNFLMS*ETSWAG
Trigger: GCCGGCCCAGCTGGTCTCCCAGGACATCAAGAAGTT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGGAAGGTTTCTGAGTTaGACAGGAACGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYGRFLS*TGTILV
Trigger: CACCAGGATCGTTCCTGTCCAACTCAGAAACCTTCC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCAGGGGGTCCTTGAATaGCTCCATAAGTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHQGVLE*LHKFGR
Trigger: TCTTCCAAACTTATGGAGCCATTCAAGGACCCCCTG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTGGAGCTGTCCTGCCATaGCTAGCTCACGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSGAVLP*LAHGLT
Trigger: TGTCAAGCCGTGAGCTAGCCATGGCAGGACAGCTCC...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAATGCATTATGAGACCTaGTCCAGGAGCTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPMHYET*SRSCPA
Trigger: GGCAGGACAGCTCCTGGACCAGGTCTCATAATGCAT...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGCATTATGAGACCTaGTCCAGGAGCTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISMHYET*SRSCPA
Trigger: GGCAGGACAGCTCCTGGACCAGGTCTCATAATGCAT...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGCTGTTTGCTCTGGCCTaGTTCAGTATAACATATCCA +
Preference number: 4 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMLFALA*FSITYP
Trigger: TGGATATGTTATACTGAACCAGGCCAGAGCAAACAG...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTGGACCACACATTGCCTaGGATCCCTGGTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSGPHIA*DPWWTR
Trigger: CCGGGTCCACCAGGGATCCCAGGCAATGTGTGGTCC...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR TCA 90 bp GCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATGCATGGCGGGTAACGTaGGTTTTCCTTTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: AFVDMAEAGFCFSNANANAWRVT*VFLSKV
Trigger: AACCTTTGAAAGGAAAACTCACGTTACCCGCCATGC...ATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR TCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGCAGTATGCTCCTCCTaGTCCTCTCCAGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYAVCSS*SSPAHP
Trigger: TGGATGAGCTGGAGAGGATCAGGAGGAGCATACTGC...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCCACGCTGCCTTTTTaGCCCTTTGGTCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYPTLPF*PFGPCG
Trigger: TCCACAAGGACCAAAGGGTCAAAAAGGCAGCGTGGG...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAGACAGTGAGCATCGATaGCCCCTCCGAAGTCACGAT +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRDSEHR*PLRSHD
Trigger: ATCGTGACTTCGGAGGGGTCATCGATGCTCACTGTC...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACGTGCCACATGCATTATaGGACCTGGTCCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNVPHAL*DLVQEL
Trigger: CAGCTCCTGGACCAGGTCTCATAATGCATGTGGCAC...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAAGGGGAGGAAGGAGCTaGTGGCACAGCCTTAGAACA +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATRGGRS*WHSLRT
Trigger: TGTTCTAAGGCTGTGCCATCAGCTCCTTCCTCCCCT...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGGGTGACGTCTTGAGCTaGTGCTGTGTCCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMGDVLS*CCVPSI
Trigger: GATGCTGGGGACACAGCATCAGCTCAAGACGTCACC...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAGTGCAGAATGGAGGGTaGCGTCTTGAGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRVQNGG*RLELML
Trigger: CAGCATCAGCTCAAGACGTCACCCTCCATTCTGCAC...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACGTGCAGAATGGAGGGTaGCGTCTTGAGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNVQNGG*RLELML
Trigger: CAGCATCAGCTCAAGACGTCACCCTCCATTCTGCAC...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGCATCAAAAGCTTGTTaGCTGCGTAACTGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYASKAC*LRNCAV
Trigger: AACGGCACAGTTACGCAGTCAACAAGCTTTTGATGC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR TCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACCTTGCAGTAGGCCCTaGCCTGTAAAACACCAGAGC +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATPCSRP*PVKHQS
Trigger: GCTCTGGTGTTTTACAGGTCAGGGCCTACTGCAAGG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR GCA 90 bp TGCAAATGCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTGACTCAGCAGTTATGTAGCCGCTGCTaGCATGAGTCAGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: CKCKSPRKLVELQLLTQQLCSRC*HESGFV
Trigger: AACAAAGCCTGACTCATGGCAGCAGCGGCTACATAA...CTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGCATTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAGGCATGGCCTCGTGTaGTTCCAGTTGAGTTTATGT +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYRHGLV*FQLSLC
Trigger: ACATAAACTCAACTGGAAGCACACGAGGCCATGCCT...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACACCACCACCACTGCTaGCGTAGCTGTGGATATCTG +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATHHHHC*RSCGYL
Trigger: CAGATATCCACAGCTACGGCAGCAGTGGTGGTGGTG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCTGGCTGTCACTGTaGAGCCCAATTTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNISWLSL*SPILSR
Trigger: CCTGGACAAAATTGGGCTGCACAGTGACAGCCAGGA...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACGTCGCTGTTTTCAGCTaGATAGGTTGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNVAVFS*IGCQGS
Trigger: GGAGCCCTGGCAACCTATGCAGCTGAAAACAGCGAC...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACCACCACCTCCTCCTGTaGTCATGGAAGAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNHHLLL*SWKSCR
Trigger: CCTACAGCTCTTCCATGAGCACAGGAGGAGGTGGTG...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCTGGGCCGATGTCAGTaGCATAGGGACCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSLGRCQ*HRDPCL
Trigger: GAGACAGGGGTCCCTATGGCACTGACATCGGCCCAG...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATACTTTGGGTCCTGGAGTaGCCATCTCTCCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNILWVLE*PSLLFA
Trigger: GGCAAAAAGGAGAGATGGGCACTCCAGGACCCAAAG...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGACCTTGGACCTAAGTaGCACATGCATTATGAGACC +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYDLGPK*HMHYET
Trigger: GGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCAACTGACTAGAGAATaGAGAATGAACAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHQLTRE*RMNRGG
Trigger: TCCTCCCCTGTTCATTCTGCATTCTCTAGTCAGTTG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGCCCAGTCCCCCAAGTaGCATTTTCTGAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIAQSPK*HFLSAE
Trigger: TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTCTAGAGGTGGAGGCATaGCCTCGTGTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSLEVEA*PRVLPV
Trigger: AACTGGAAGCACACGAGGCCATGCCTCCACCTCTAG...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACTAGAGGTGGAGGCATaGCCTCGTGTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATLEVEA*PRVLPV
Trigger: AACTGGAAGCACACGAGGCCATGCCTCCACCTCTAG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGTTTGACTCCGTCCTCTaGTTGAAGAAGATGCAAATT +
Preference number: 4 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWFDSVL*LKKMQI
Trigger: AATTTGCATCTTCTTCAACCAGAGGACGGAGTCAAA...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTGGATGGGGAGTGTGTTaGAGGAATTCCGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSGWGVC*RNSGWG
Trigger: GCCCCACCCGGAATTCCTCCAACACACTCCCCATCC...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGCCTTTCTTGGGGATaGGGAGTGTGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPCLSWG*GVCWRN
Trigger: ATTCCTCCAACACACTCCCCATCCCCAAGAAAGGCA...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACGTGCCTGACACCGACTaGGAGCTCGCTGTCACAATT +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNVPDTD*ELAVTI
Trigger: AATTGTGACAGCGAGCTCCCAGTCGGTGTCAGGCAC...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGGTGGAGGACCACACATaGGAGGGAAGGTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMVEDHT*EGRLAS
Trigger: GGATGCCAACCTTCCCTCCCATGTGTGGTCCTCCAC...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAACAGGGTGGTCAAGCTaGGGGCCAGATTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRTGWSS*GPDCSA
Trigger: TGCAGAACAATCTGGCCCCCAGCTTGACCACCCTGT...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTGTGGTGGTGGTGCCATaGGACAGGGTGGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSVVVVP*DRVVKL
Trigger: CAGCTTGACCACCCTGTCCCATGGCACCACCACCAC...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCTGTGGAAGTGGTGGTaGTGCCATGGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSLWKWW*CHGTGW
Trigger: CCACCCTGTCCCATGGCACCACCACCACTTCCACAG...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTTGCAGGCGGCGGAGGTaGAAACGCCAGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSCRRRR*KRQCSQ
Trigger: CTGTGAACACTGGCGTTTCCACCTCCGCCGCCTGCA...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGGCTCCATCTCCTTCTTaGCAGGTGTGTTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLAPSPS*QVCCLS
Trigger: AGAAAGACAACACACCTGCCAAGAAGGAGATGGAGC...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACGGTCCTTTCTCACCCTaGTCACCTTTGGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNGPFSP*SPLGPG
Trigger: ACCAGGACCCAAAGGTGACCAGGGTGAGAAAGGACC...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGTCCAGAAGGTCCTGGTaGGCCACGGATTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMSRRSW*ATDSRH
Trigger: ATGCCTGGAATCCGTGGCCCACCAGGACCTTCTGGA...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCCTTGCCTGGAGCTCCTaGTTCACCTTTTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISLAWSS*FTFYSW
Trigger: CCAGGAATAAAAGGTGAACCAGGAGCTCCAGGCAAG...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTCTCCTCCTGTGCTCATaGAAGAGCTGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSLLLCS*KSCRSC
Trigger: GCAGCTCCTACAGCTCTTCCATGAGCACAGGAGGAG...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTTTAGACATTGAAAAGTaGTTAAAGACCAACTGCGCC +
Preference number: 4 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPLDIEK*LKTNCA
Trigger: GGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp CTCCCCTTGAGCAAACGCTTAACATCATCCAATTCTGTCCATCGGGTGGATGGGGACAGCAAGTTAATGTaGCTGATAGTCCCCTTAATA +
Preference number: 4 (lower is better)
Translates to: LPLSKRLTSSNSVHRVDGDSKLM*LIVPLI
Trigger: TATTAAGGGGACTATCAGCCACATTAACTTGCTGTC...CCCATCCACCCGATGGACAGAATTGGATGATGTTAAGCGTTTGCTCAAGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR TCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAGGTGTTGAGGAGGGATaGGCTCTGGGTTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATGVEEG*ALGCHV
Trigger: AACATGACAACCCAGAGCTCATCCCTCCTCAACACC...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGCCCACGCTGCCTTTTTaGCCCTTTGGTCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMPTLPF*PFGPCG
Trigger: TCCACAAGGACCAAAGGGTCAAAAAGGCAGCGTGGG...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACAGGAAGCCCAATGCTaGTCCCAGAACTCGACATGT +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATQEAQC*SQNSTC
Trigger: ACATGTCGAGTTCTGGGATCAGCATTGGGCTTCCTG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCAGGAAGCCCAATGCTaGTCCCAGAACTCGACATGT +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYQEAQC*SQNSTC
Trigger: ACATGTCGAGTTCTGGGATCAGCATTGGGCTTCCTG...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATACTCCGGAGAAGAGTTaGCACTGGAGCTCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYTPEKS*HWSSLH
Trigger: ATGAAGGGAGCTCCAGTGGCAACTCTTCTCCGGAGT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGACTCCGGAGAAGAGTTaGCACTGGAGCTCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQTPEKS*HWSSLH
Trigger: ATGAAGGGAGCTCCAGTGGCAACTCTTCTCCGGAGT...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGGGGGCCAGATTGTTCTaGATGCCAAACACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQGARLF*MPNTEE
Trigger: CTCCTCAGTGTTTGGCATGCAGAACAATCTGGCCCC...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp AATGCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCACTAGGATCAGGAACTTaGAGTCCTTGTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: NAFVDMAEAGFCFSNANALGSGT*SPCAKG
Trigger: ACCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAG...TGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAATAGTCCGCCATTaGCAGCATACATGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYPIVRH*QHTCRL
Trigger: AAGGCGGCATGTATGCTGGCAATGGCGGACTATTGG...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGACTTTGGGTCCTGGAGTaGCCATCTCTCCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRLWVLE*PSLLFA
Trigger: GGCAAAAAGGAGAGATGGGCACTCCAGGACCCAAAG...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGACCTAAGTGCCACATaGATTATGAGACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISDLSAT*IMRPGP
Trigger: TGGACCAGGTCTCATAATGCATGTGGCACTTAGGTC...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGACCTTGGACCTAAGTaGCACATGCATTATGAGACC +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISDLGPK*HMHYET
Trigger: GGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTC...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp AATGCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAGCAGAGGCAGGCTTTTaGTTCAGTAATGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: NAFVDMAEAGFCFSNANAAEAGF*FSNANA
Trigger: TGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC...TGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGCATATGCTGTGGAAGTaGTGGTGGTGCCATGGGACA +
Preference number: 4 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQHMLWK*WWCHGT
Trigger: TGTCCCATGGCACCACCACCACTTCCACAGCATATG...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGGATATCTGCAGTGGTaGTCTTGCCCTTTGTGGACA +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIGYLQW*SCPLWT
Trigger: TGTCCACAAAGGGCAAGACCACCACTGCAGATATCC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATACCTTTGGGTCCTGGTaGTCCCATTGGTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYTFGSW*SHWSFV
Trigger: GACAAAGGACCAATGGGACCACCAGGACCCAAAGGT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCACTCTCTCGTGTTTaGCTCCGTCCTCTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNSLSRV*LRPLVE
Trigger: TTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGA...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGTCCTTTGTCACCTTTaGCACCAGGAAGTCCTACTT +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIVLCHL*HQEVLL
Trigger: AAGTAGGACTTCCTGGTGTCAAAGGTGACAAAGGAC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAAACTCGACATGTAGCTaGGAATGCGACTACTCAGCT +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNINSTCS*ECDYSA
Trigger: AGCTGAGTAGTCGCATTCTCAGCTACATGTCGAGTT...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAGTCTCAGTAGGACATTaGCAGACTCCAGCTTTCACC +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRVSVGH*QTPAFT
Trigger: GGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGAC...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATTAGAGTCCACCCCATaGAGCTGTTTCAGATTGTGT +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITLESTP*SCFRLC
Trigger: ACACAATCTGAAACAGCTTCATGGGGTGGACTCTAA...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGCTGCAGTGGTGGTCTTaGCCTTTGTGGACACAGTCT +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMLQWWS*PLWTQS
Trigger: AGACTGTGTCCACAAAGGGCAAGACCACCACTGCAG...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCTAATACTGTCACTCTaGATGTACTCAGAGATGTAC +
Preference number: 4 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHLILSL*MYSEMY
Trigger: GTACATCTCTGAGTACATGCAGAGTGACAGTATTAG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCACCACCTCCTCCTGTaGTCATGGAAGAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSHHLLL*SWKSCR
Trigger: CCTACAGCTCTTCCATGAGCACAGGAGGAGGTGGTG...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACACAACTGACTAGAGAATaGAGAATGAACAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SIALNLLFLFALAWFSITQLTRE*RMNRGG
Trigger: TCCTCCCCTGTTCATTCTGCATTCTCTAGTCAGTTG...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATTCCTTCCTTGTCCATTaGCCTCAACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYSFLVH*PQPSFS
Trigger: AGAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGA...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTTGCCTTTCTTGGGGATaGGGAGTGTGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSCLSWG*GVCWRN
Trigger: ATTCCTCCAACACACTCCCCATCCCCAAGAAAGGCA...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTGGTCTTGCCCTTTGTaGACACAGTCTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNWSCPL*TQSSGL
Trigger: GAGACCTGAAGACTGTGTCCACAAAGGGCAAGACCA...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTGGTCTTGCCCTTTGTaGACACAGTCTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYWSCPL*TQSSGL
Trigger: GAGACCTGAAGACTGTGTCCACAAAGGGCAAGACCA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGATGTGGATATCTGCAGTaGTGGTCTTGCCCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRCGYLQ*WSCPLW
Trigger: CCACAAAGGGCAAGACCACCACTGCAGATATCCACA...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAATCTCCTTTAGGGCCTaGACTTCCCATGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIISFRA*TSHVTF
Trigger: AAAGGTGACATGGGAAGTCCAGGCCCTAAAGGAGAT...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTCCTGGTGGTCCCATTaGTCCTTTGTCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYSWWSH*SFVTFD
Trigger: GTCAAAGGTGACAAAGGACCAATGGGACCACCAGGA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGACTTGCCTGGAGCTCCTaGTTCACCTTTTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRLAWSS*FTFYSW
Trigger: CCAGGAATAAAAGGTGAACCAGGAGCTCCAGGCAAG...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAAGTCACGATCTTGCCTaGAGCTCCTGGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATSHDLA*SSWFTF
Trigger: AAAGGTGAACCAGGAGCTCCAGGCAAGATCGTGACT...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGATGCATTATGAGACCTaGTCCAGGAGCTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMMHYET*SRSCPA
Trigger: GGCAGGACAGCTCCTGGACCAGGTCTCATAATGCAT...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
3UTR CAA 72 bp GAATTTCACTCTCTCGTGTTTGACTCCGTCCTCTGGTaGAAGAAGATGCATTTCTATAGTGCCACGAGCAAA +
Preference number: 4 (lower is better)
Translates to: EFHSLVFDSVLW*KKMHFYSATSK
Trigger: TTTGCTCGTGGCACTATAGAAATGCATCTTCTTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR TCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAGCATGGCGGGTAACGTaGGTTTTCCTTTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRAWRVT*VFLSKV
Trigger: AACCTTTGAAAGGAAAACTCACGTTACCCGCCATGC...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGTCACTCTCTCGTGTTTaGCTCCGTCCTCTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMSLSRV*LRPLVE
Trigger: TTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGA...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAAAATTAAGAACTTCTTaGTGTCCTGGGAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPKLRTS*CPGRPA
Trigger: AGCTGGTCTCCCAGGACATCAAGAAGTTCTTAATTT...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp GCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCCTGGTTTGAGGTTTTaGAGGAATTGGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: AFVDMAEAGFCFSNANANPGLRF*RNWKQL
Trigger: AAGTTGTTTCCAATTCCTTCAAAACCTCAAACCAGG...ATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTTATGTAGCCGCTGCTaGCATGAGTCAGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYLCSRC*HESGFV
Trigger: AACAAAGCCTGACTCATGGCAGCAGCGGCTACATAA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTTTATGTAGCCGCTaGTGCCATGAGTCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSSLCSR*CHESGF
Trigger: AAAGCCTGACTCATGGCAGCAGCGGCTACATAAACT...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGGCATGGCCTCGTGTaGTTCCAGTTGAGTTTATGT +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSRHGLV*FQLSLC
Trigger: ACATAAACTCAACTGGAAGCACACGAGGCCATGCCT...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGGATGGGGACGCACTCTaGAGTCGAACTCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMDGDAL*SRTRIS
Trigger: TGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATC...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTGACCTAAGTGCCACATaGATTATGAGACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSDLSAT*IMRPGP
Trigger: TGGACCAGGTCTCATAATGCATGTGGCACTTAGGTC...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGACCTTGGACCTAAGTaGCACATGCATTATGAGACC +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYDLGPK*HMHYET
Trigger: GGTCTCATAATGCATGTGGCACTTAGGTCCAAGGTC...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAGCTCCATCTCCTTCTTaGCAGGTGTGTTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRAPSPS*QVCCLS
Trigger: AGAAAGACAACACACCTGCCAAGAAGGAGATGGAGC...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTGCCTTTTTGACCCTTTaGTCCTTGTGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSAFLTL*SLWTWV
Trigger: CACCCAGGTCCACAAGGACCAAAGGGTCAAAAAGGC...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGCAGGGGGTCCTTGAATaGCTCCATAAGTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQQGVLE*LHKFGR
Trigger: TCTTCCAAACTTATGGAGCCATTCAAGGACCCCCTG...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCACTGTTTGCTCTGGCCTaGTTCAGTATAACATATCCA +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPLFALA*FSITYP
Trigger: TGGATATGTTATACTGAACCAGGCCAGAGCAAACAG...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR TCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGGCATGGCGGGTAACGTaGGTTTTCCTTTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMAWRVT*VFLSKV
Trigger: AACCTTTGAAAGGAAAACTCACGTTACCCGCCATGC...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGGTCCTTTGTCACCTTTaGCACCAGGAAGTCCTACTT +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMVLCHL*HQEVLL
Trigger: AAGTAGGACTTCCTGGTGTCAAAGGTGACAAAGGAC...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TGCAAATGCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTGACTCAGCAGAATTGGAAACAACTTTaGATAAATCCCCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CKCKSPRKLVELQLLTQQNWKQL*INPPLS
Trigger: AGAGAGAGGGGGATTTATTCAAAGTTGTTTCCAATT...CTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGCATTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR GCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTGATGGGGACGCACTCTaGAGTCGAACTCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSDGDAL*SRTRIS
Trigger: TGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATC...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACCTAGGATCAGGAACTTaGAGTCCTTGTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNLGSGT*SPCAKG
Trigger: ACCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAG...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR GCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTGTAGCTGTGGATATCTaGAGTGGTGGTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSVAVDI*SGGLAL
Trigger: AAGGGCAAGACCACCACTGCAGATATCCACAGCTAC...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATTAGACATTGAAAAGTaGTTAAAGACCAACTGCGCC +
Preference number: 4 (lower is better)
Translates to: ALNLLFLFALAWFSITYPLDIEK*LKTNCA
Trigger: GGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGCTCGTTTGTTTTTCTTaGTTACATCCATACCATAGC +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLLVCFS*LHPYHS
Trigger: GCTATGGTATGGATGTAACCAAGAAAAACAAACGAG...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATCTCGTTTGTTTTTCTTaGTTACATCCATACCATAGC +
Preference number: 4 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYLVCFS*LHPYHS
Trigger: GCTATGGTATGGATGTAACCAAGAAAAACAAACGAG...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CCA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGTGGCTGAAGTCAAGGTaGACAACAATCATATTTGTT +
Preference number: 4 (lower is better)
Translates to: AEAGFCFSNANANHLGSLWLKSR*TTIIFV
Trigger: AACAAATATGATTGTTGTCCACCTTGACTTCAGCCA...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTAATGCCAAGAGCCCCTaGAACACCTGGATCACCTTT +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSNAKSP*NTWITF
Trigger: AAAGGTGATCCAGGTGTTCCAGGGGCTCTTGGCATT...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR TCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACAAATTAAGAACTTCTTaGTGTCCTGGGAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNKLRTS*CPGRPA
Trigger: AGCTGGTCTCCCAGGACATCAAGAAGTTCTTAATTT...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTAACTCGACATGTAGCTaGGAATGCGACTACTCAGCT +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSNSTCS*ECDYSA
Trigger: AGCTGAGTAGTCGCATTCTCAGCTACATGTCGAGTT...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR TCA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAATTGGAAACAACTTTaGATAAATCCCCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISNWKQL*INPPLS
Trigger: AGAGAGAGGGGGATTTATTCAAAGTTGTTTCCAATT...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR GCA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGATCCTTCCTTGTCCATTaGCCTCAACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: NISMNSSMGLRTIIATIRSFLVH*PQPSFS
Trigger: AGAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGA...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR GCA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTCCTTCCTTGTCCATTaGCCTCAACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: IALNLLFLFALAWFSITYSFLVH*PQPSFS
Trigger: AGAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTCTGTTTGCTCTGGCCTaGTTCAGTATAACATATCCA +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSLFALA*FSITYP
Trigger: TGGATATGTTATACTGAACCAGGCCAGAGCAAACAG...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACTGTTTGCTCTGGCCTaGTTCAGTATAACATATCCA +
Preference number: 4 (lower is better)
Translates to: QYNISMNSSMGLRTIIATLFALA*FSITYP
Trigger: TGGATATGTTATACTGAACCAGGCCAGAGCAAACAG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTCATACCATAGCCACCTaGTTTGAGGTTTTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSHTIAT*FEVLKE
Trigger: TTCCTTCAAAACCTCAAACCAGGTGGCTATGGTATG...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR GCA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTCTAATACTGTCACTCTaGATGTACTCAGAGATGTAC +
Preference number: 4 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSLILSL*MYSEMY
Trigger: GTACATCTCTGAGTACATGCAGAGTGACAGTATTAG...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTTAGACATTGAAAAGTaGTTAAAGACCAACTGCGCC +
Preference number: 4 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNLDIEK*LKTNCA
Trigger: GGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CCA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGTTTGACTCCGTCCTCTaGTTGAAGAAGATGCAAATT +
Preference number: 4 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMFDSVL*LKKMQI
Trigger: AATTTGCATCTTCTTCAACCAGAGGACGGAGTCAAA...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CCA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTTTAGACATTGAAAAGTaGTTAAAGACCAACTGCGCC +
Preference number: 4 (lower is better)
Translates to: YILFRLKQMLLARLAVLSLDIEK*LKTNCA
Trigger: GGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS GCA 90 bp GCCTCCGCCTGGGCCGATGTCAGTGCCATAGGGACCCCTGTCTCCTaGAGCTTCACCAAAGGCACCGCCTGCACCCAGGGAGCCTGCACC +
Preference number: 5 (lower is better)
Translates to: ASAWADVSAIGTPVS*SFTKGTACTQGACT
Trigger: GGTGCAGGCTCCCTGGGTGCAGGCGGTGCCTTTGGTGAAGCTGCAGGAGACAGGGGTCCCTATGGCACTGACATCGGCCCAGGCGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS CCA 90 bp GGCCCTGCCTCACCACGAGGTCCCATGGGGCCTTCTCGCCCTCTCTaGCCCATGGGGCCTTCCATGCCAGGATCTCCCACGCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: GPASPRGPMGPSRPL*PMGPSMPGSPTLPF
Trigger: AAAAGGCAGCGTGGGAGATCCTGGCATGGAAGGCCCCATGGGCCAGAGAGGGCGAGAAGGCCCCATGGGACCTCGTGGTGAGGCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS GCA 90 bp CGCCTTCTGCTGCTGCCCCATAGCCTCCGCCTGGGCCGATGTCAGTaGCATAGGGACCCCTGTCTCCTGCAGCTTCACCAAAGGCACCGC +
Preference number: 5 (lower is better)
Translates to: RLLLLPHSLRLGRCQ*HRDPCLLQLHQRHR
Trigger: GCGGTGCCTTTGGTGAAGCTGCAGGAGACAGGGGTCCCTATGGCACTGACATCGGCCCAGGCGGAGGCTATGGGGCAGCAGCAGAAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS CCA 90 bp CTTTCTCTCCAGATCCAGGAGGCCCTGCCTCACCACGAGGTCCCATaGGGCCTTCTCGCCCTCTCTGGCCCATGGGGCCTTCCATGCCAG +
Preference number: 5 (lower is better)
Translates to: LSLQIQEALPHHEVP*GLLALSGPWGLPCQ
Trigger: CTGGCATGGAAGGCCCCATGGGCCAGAGAGGGCGAGAAGGCCCCATGGGACCTCGTGGTGAGGCAGGGCCTCCTGGATCTGGAGAGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS CCA 90 bp AGGACCCCGCGGGCAGGGTGGAGGACCACACATGGGAGGGAAGGTTaGCATCCAGGATCGTTGCATCGTAGGTGCCTGACACCGACTGGG +
Preference number: 5 (lower is better)
Translates to: RTPRAGWRTTHGREG*HPGSLHRRCLTPTG
Trigger: CCCAGTCGGTGTCAGGCACCTACGATGCAACGATCCTGGATGCCAACCTTCCCTCCCATGTGTGGTCCTCCACCCTGCCCGCGGGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS CCA 90 bp CCTCACCACGAGGTCCCATGGGGCCTTCTCGCCCTCTCTGGCCCATaGGGCCTTCCATGCCAGGATCTCCCACGCTGCCTTTTTGACCCT +
Preference number: 5 (lower is better)
Translates to: PHHEVPWGLLALSGP*GLPCQDLPRCLFDP
Trigger: AGGGTCAAAAAGGCAGCGTGGGAGATCCTGGCATGGAAGGCCCCATGGGCCAGAGAGGGCGAGAAGGCCCCATGGGACCTCGTGGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS GCA 90 bp CAGCGCCACCAACACCGCCACCTCCTCCACTGCCACCACCACCACTaGTGCCGTAGCTGTGGATATCTGCAGTGGTGGTCTTGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: QRHQHRHLLHCHHHH*CRSCGYLQWWSCPL
Trigger: CAAAGGGCAAGACCACCACTGCAGATATCCACAGCTACGGCAGCAGTGGTGGTGGTGGCAGTGGAGGAGGTGGCGGTGTTGGTGGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000648076.2
ENST00000650263.1
CDS GCA 90 bp CTCCAGCAAAGTCAGCTCCCAATAGTCCGCCATTGCCAGCATACATaGCGCCTTCTGCTGCTGCCCCATAGCCTCCGCCTGGGCCGATGT +
Preference number: 5 (lower is better)
Translates to: LQQSQLPIVRHCQHT*RLLLLPHSLRLGRC
Trigger: ACATCGGCCCAGGCGGAGGCTATGGGGCAGCAGCAGAAGGCGGCATGTATGCTGGCAATGGCGGACTATTGGGAGCTGACTTTGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS CCA 90 bp GGAGGGATGAGCTCTGGGTTGTCATGTTGTTGTGATAGGTCCCCATaGAGGACCCCGCGGGCAGGGTGGAGGACCACACATGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: GGMSSGLSCCCDRSP*RTPRAGWRTTHGRE
Trigger: TTCCCTCCCATGTGTGGTCCTCCACCCTGCCCGCGGGGTCCTCCATGGGGACCTATCACAACAACATGACAACCCAGAGCTCATCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS TCA 90 bp CTGGAACCTTTGGGACCCACAGAACCTGGGACACCAGGTGGGCCATaGGGACCTGGTTCACCAGCAGCCCCTCTTTCCCCTTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LEPLGPTEPGTPGGP*GPGSPAAPLSPFSP
Trigger: TGGAGAGAAAGGGGAAAGAGGGGCTGCTGGTGAACCAGGTCCTCATGGCCCACCTGGTGTCCCAGGTTCTGTGGGTCCCAAAGGTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS GCA 90 bp AGCTTCTTCCTCACGAACATCCAGAGCTCCTCCTGGCTGTCACTGTaGAGCCCAATTTTGTCCAGGTCTGCTCCCGCCGCGGGTGCCATG +
Preference number: 5 (lower is better)
Translates to: SFFLTNIQSSSWLSL*SPILSRSAPAAGAM
Trigger: CATGGCACCCGCGGCGGGAGCAGACCTGGACAAAATTGGGCTGCACAGTGACAGCCAGGAGGAGCTCTGGATGTTCGTGAGGAAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000480127.2
ENST00000648076.2
ENST00000650263.1
CDS CCA 90 bp TCATGTTGTTGTGATAGGTCCCCATGGAGGACCCCGCGGGCAGGGTaGAGGACCACACATGGGAGGGAAGGTTGGCATCCAGGATCGTTG +
Preference number: 5 (lower is better)
Translates to: SCCCDRSPWRTPRAG*RTTHGREGWHPGSL
Trigger: CAACGATCCTGGATGCCAACCTTCCCTCCCATGTGTGGTCCTCCACCCTGCCCGCGGGGTCCTCCATGGGGACCTATCACAACAACATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS-3UTR CAA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACATCGCTCTGCACACTaGTGGTGCAGGCGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTHRSAH*WCRRRR
Trigger: CCTCCGCCGCCTGCACCACAAGTGTGCAGAGCGATG...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCGGGCCCCTGTCACCTTaGGGTCCTGGAGTGCCCATC +
Preference number: 5 (lower is better)
Translates to: KCHMHYETWSRSCPAMASGPLSP*GPGVPI
Trigger: GATGGGCACTCCAGGACCCAAAGGTGACAGGGGCCC...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS TCA 90 bp ATGACAAGCCGGCAGTATGTAAGTAAGACGAGAGGTCCTCCACGCTaGTGCTGGACCACACATTGCCTGGGATCCCTGGTGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: MTSRQYVSKTRGPPR*CWTTHCLGSLVDPG
Trigger: CCCCGGGTCCACCAGGGATCCCAGGCAATGTGTGGTCCAGCATCAGCGTGGAGGACCTCTCGTCTTACTTACATACTGCCGGCTTGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS GCA 90 bp GTCACTGTGCAGCCCAATTTTGTCCAGGTCTGCTCCCGCCGCGGGTaGCATGCCCTGGAGGCGGTCCTTTTCTATTCTATCCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: VTVQPNFVQVCSRRG*HALEAVLFYSIHAV
Trigger: GACAGCATGGATAGAATAGAAAAGGACCGCCTCCAGGGCATGGCACCCGCGGCGGGAGCAGACCTGGACAAAATTGGGCTGCACAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000480127.2
ENST00000648076.2
ENST00000650263.1
CDS CCA 90 bp CAGGCGGCGGAGGTGGAAACGCCAGTGTTCACAGCCGCAGGACTCTaGGGCATGTTTTTCTTCACCCCATATGCTGTGGAAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: QAAEVETPVFTAAGL*GMFFFTPYAVEVVV
Trigger: CACCACCACTTCCACAGCATATGGGGTGAAGAAAAACATGCCCCAGAGTCCTGCGGCTGTGAACACTGGCGTTTCCACCTCCGCCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000650263.1
CDS-3UTR CAA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACAGGGATGGGGAGTGTGTaGGAGGAATTCCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTGMGSV*EEFRVG
Trigger: CCCCACCCGGAATTCCTCCAACACACTCCCCATCCC...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS CCA 90 bp ATGCTGTGGAAGTGGTGGTGGTGCCATGGGACAGGGTGGTCAAGCTaGGGGCCAGATTGTTCTGCATGCCAAACACTGAGGAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: MLWKWWWCHGTGWSS*GPDCSACQTLRRMC
Trigger: GCACATCCTCCTCAGTGTTTGGCATGCAGAACAATCTGGCCCCCAGCTTGACCACCCTGTCCCATGGCACCACCACCACTTCCACAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000650263.1
CDS-3UTR CAA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAACATCGCTCTGCACACTaGTGGTGCAGGCGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAEHRSAH*WCRRRR
Trigger: CCTCCGCCGCCTGCACCACAAGTGTGCAGAGCGATG...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGGGGCCCCTGTCACCTTaGGGTCCTGGAGTGCCCATC +
Preference number: 5 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWGPLSP*GPGVPI
Trigger: GATGGGCACTCCAGGACCCAAAGGTGACAGGGGCCC...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS CCA 90 bp ATGCTGTGGAAGTGGTGGTGGTGCCATGGGACAGGGTGGTCAAGCTaGGGGCCAGATTGTTCTGCATGCCAAACAGTCAATGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: MLWKWWWCHGTGWSS*GPDCSACQTVNVGS
Trigger: TGAGCCCACATTGACTGTTTGGCATGCAGAACAATCTGGCCCCCAGCTTGACCACCCTGTCCCATGGCACCACCACCACTTCCACAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp GTTGCAGCGATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCGGGATGAGCTCTGGGTaGTCATGTTGTTGTGATAGG +
Preference number: 5 (lower is better)
Translates to: VAAMLAGEAVKTFPLSLVGMSSG*SCCCDR
Trigger: CCTATCACAACAACATGACAACCCAGAGCTCATCCC...GACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCATCGCTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp GTTGCAGCGATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCAGGACGCCATGTTGTTaGGAACTCCGAAGACTGATC +
Preference number: 5 (lower is better)
Translates to: VAAMLAGEAVKTFPLSLVRTPCC*ELRRLI
Trigger: GATCAGTCTTCGGAGTTCCAAACAACATGGCGTCCT...GACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCATCGCTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp AGCAGCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACCATCGCTCTGCACACTaGTGGTGCAGGCGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: SSSISFLAGVLSFSRIRNHRSAH*WCRRRR
Trigger: CCTCCGCCGCCTGCACCACAAGTGTGCAGAGCGATG...GTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACAACCTTCCCGCTGTCCTaGGTCATGATGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTTFPLS*VMMSSS
Trigger: GGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGT...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGGAGCCGCTGGAACCTTaGGGACCCACAGAACCTGGG +
Preference number: 5 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWEPLEP*GPTEPG
Trigger: CCCAGGTTCTGTGGGTCCCAAAGGTTCCAGCGGCTC...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAGAGCCGCTGGAACCTTaGGGACCCACAGAACCTGGG +
Preference number: 5 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAEEPLEP*GPTEPG
Trigger: CCCAGGTTCTGTGGGTCCCAAAGGTTCCAGCGGCTC...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCTCACCCTGGTCACCTTaGGGTCCTGGTGGTCCCATT +
Preference number: 5 (lower is better)
Translates to: KCHMHYETWSRSCPAMASSPWSP*GPGGPI
Trigger: AATGGGACCACCAGGACCCAAAGGTGACCAGGGTGA...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGAGGCCTTGCTCGCCTaGGTGTCCTCTGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHEALLA*VSSGAW
Trigger: CCAGGCCCCAGAGGACACCAAGGCGAGCAAGGCCTC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CAA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACATCCACAGTGCCTTTCTaGGGGATGGGGAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTSTVPF*GMGSVL
Trigger: CAACACACTCCCCATCCCCAAGAAAGGCACTGTGGA...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATCACCTTTGTCACCTTaGGGTCCCTGGGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPSPLSP*GPWGPG
Trigger: ACCTGGCCCCCAGGGACCCAAAGGTGACAAAGGTGA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS TCA 90 bp GAAGAGTTGCCACTGGAGCTCCCTTCATACGCATGGCGGGTAACGTaGGTTTTCCTTTCAAAGGTTGAGCCTGGGGAGTTGGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: EELPLELPSYAWRVT*VFLSKVEPGELGRV
Trigger: CACTCTGCCCAACTCCCCAGGCTCAACCTTTGAAAGGAAAACTCACGTTACCCGCCATGCGTATGAAGGGAGCTCCAGTGGCAACTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000483876.1
ENST00000648076.2
ENST00000649118.1
CDS GCA 90 bp GCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTCCTTGTaGAAAAGGTCATCGCTCTGCACACTTGTGGTGCAGGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: AGVLSFSRIRNLQSL*KRSSLCTLVVQAAE
Trigger: CTCCGCCGCCTGCACCACAAGTGTGCAGAGCGATGACCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000650263.1
CDS GCA 90 bp GATCCCAGAACTCGACATGTAGCTGAGAATGCGACTACTCAGCTCTaGATAGTCCAAAGACAGGAGGGACCCATCTCCACTGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: DPRTRHVAENATTQL*IVQRQEGPISTGSW
Trigger: CCAGGAGCCAGTGGAGATGGGTCCCTCCTGTCTTTGGACTATGCAGAGCTGAGTAGTCGCATTCTCAGCTACATGTCGAGTTCTGGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTCGTGTGCTTCCAGTaGAGTTTATGTAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTLVCFQ*SLCSRC
Trigger: GCAGCGGCTACATAAACTCAACTGGAAGCACACGAG...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACAGCCGATCGACTCCCCTaGAGCAAACGCTTAACATCA +
Preference number: 5 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTADRLP*SKRLTS
Trigger: TGATGTTAAGCGTTTGCTCAAGGGGAGTCGATCGGC...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp GCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACAGGACGCCATGTTGTTaGGAACTCCGAAGACTGATC +
Preference number: 5 (lower is better)
Translates to: AFITHSQVWLMLLARGPHRTPCC*ELRRLI
Trigger: GATCAGTCTTCGGAGTTCCAAACAACATGGCGTCCT...GTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp GCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACAGGAACTTGCAGTCCTaGTGCAAAAGGTCATCGCTC +
Preference number: 5 (lower is better)
Translates to: AFITHSQVWLMLLARGPHRNLQS*CKRSSL
Trigger: GAGCGATGACCTTTTGCACAAGGACTGCAAGTTCCT...GTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGACCTTCCCGCTGTCCTaGGTCATGATGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMTFPLS*VMMSSS
Trigger: GGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGT...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCTGGTGGTCTTGCCCTTaGTGGACACAGTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: KCHMHYETWSRSCPAMASWWSCP*WTQSSG
Trigger: ACCTGAAGACTGTGTCCACAAAGGGCAAGACCACCA...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCTGCCTTTTTGACCCTTaGGTCCTTGTGGACCTGGGT +
Preference number: 5 (lower is better)
Translates to: KCHMHYETWSRSCPAMASCLFDP*VLVDLG
Trigger: ACCCAGGTCCACAAGGACCAAAGGGTCAAAAAGGCA...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTCCCAATAGTCCGCCATaGCCAGCATACATGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPPNSPP*PAYMPP
Trigger: AGGCGGCATGTATGCTGGCAATGGCGGACTATTGGG...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCCCAATAGTCCGCCATaGCCAGCATACATGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWPNSPP*PAYMPP
Trigger: AGGCGGCATGTATGCTGGCAATGGCGGACTATTGGG...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGATCTCCTTTTTCTCCCTaGTGTCCTCGAGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRSPFSP*CPRGPG
Trigger: ACCTGGCCCTCGAGGACACAAGGGAGAAAAAGGAGA...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp ACTCCCAAAGCAGTTGAACTAGATCAAGCCGCAGCAAGGGTGAAGCCCTCCAACTCTCCTTTTTCTCCCTaGTGTCCTCGAGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: TPKAVELDQAAARVKPSNSPFSP*CPRGPG
Trigger: ACCTGGCCCTCGAGGACACAAGGGAGAAAAAGGAGA...GTTGGAGGGCTTCACCCTTGCTGCGGCTTGATCTAGTTCAACTGCTTTGGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CAA 90 bp AGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCAGCTCCATGAGTTCTCCCTGTGGTaGAAGGCAGGTTCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: RGGCKDLPAVLGHDEQLHEFSLW*KAGSVQ
Trigger: TTGCACAGAACCTGCCTTCAACCACAGGGAGAACTC...ATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS GCA 90 bp TTGTTCTGCATGCCAAACACTGAGGAGGATGTGCTGAGTCCAGGGTaGAAAGTGGGTGAGCAGGACGCCATGTTGTTTGGAACTCCGAAG +
Preference number: 5 (lower is better)
Translates to: LFCMPNTEEDVLSPG*KVGEQDAMLFGTPK
Trigger: CTTCGGAGTTCCAAACAACATGGCGTCCTGCTCACCCACTTTGCACCCTGGACTCAGCACATCCTCCTCAGTGTTTGGCATGCAGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000650263.1
CDS-3UTR CAA 90 bp TGGGATCCTGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTCTCGCTGTCACAATTTaGGTCTCCACAGTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: WDPAFITHSQVWLMLLARLAVTI*VSTVPF
Trigger: GAAAGGCACTGTGGAGACCAAAATTGTGACAGCGAG...ACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCAGGATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATGGCATCCAGGATCGTaGCATCGTAGGTGCCTGACA +
Preference number: 5 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPWHPGS*HRRCLT
Trigger: TGTCAGGCACCTACGATGCAACGATCCTGGATGCCA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAACATGGGAGGGAAGGTaGGCATCCAGGATCGTTGCA +
Preference number: 5 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAETWEGR*ASRIVA
Trigger: TGCAACGATCCTGGATGCCAACCTTCCCTCCCATGT...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCAGGACGCCATGTTGTTaGGAACTCCGAAGACTGATC +
Preference number: 5 (lower is better)
Translates to: KCHMHYETWSRSCPAMASRTPCC*ELRRLI
Trigger: GATCAGTCTTCGGAGTTCCAAACAACATGGCGTCCT...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTTTGAGCAGGACGCCATGTaGTTTGGAACTCCGAAGACT +
Preference number: 5 (lower is better)
Translates to: FITHSQVWLMLLARGPHFEQDAM*FGTPKT
Trigger: AGTCTTCGGAGTTCCAAACAACATGGCGTCCTGCTC...AAAGTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp AGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCAGCTCCATAGGAACTTGCAGTCCTaGTGCAAAAGGTCATCGCTC +
Preference number: 5 (lower is better)
Translates to: RGGCKDLPAVLGHDEQLHRNLQS*CKRSSL
Trigger: GAGCGATGACCTTTTGCACAAGGACTGCAAGTTCCT...ATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp GCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACTCTAGGATCAGGAACTaGCAGTCCTTGTGCAAAAGG +
Preference number: 5 (lower is better)
Translates to: AFITHSQVWLMLLARGPHSRIRN*QSLCKR
Trigger: CCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGA...GTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp ATGCTGGCAGGGGAGGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCTTCTTGGCAGGTGTGTaGTCTTTCTCTAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: MLAGEAVKTFPLSLVMMSFLAGV*SFSRIR
Trigger: CCTGATCCTAGAGAAAGACAACACACCTGCCAAGAA...GCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCCTCCCCTGCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACAAGCTCCATCTCCTTCTaGGCAGGTGTGTTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTSSISF*AGVLSF
Trigger: GAAAGACAACACACCTGCCAAGAAGGAGATGGAGCT...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp CTAGGTTGGCTGTGCTGTCTCAGTAGGACATTGACAGACTCCAGCTTTCACCCTTCCCACGCTGCCTTTTaGACCCTTTGGTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: LGWLCCLSRTLTDSSFHPSHAAF*TLWSLW
Trigger: CCACAAGGACCAAAGGGTCAAAAAGGCAGCGTGGGA...AGGGTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACAGCACAGCCAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATCCGAAGTCACGATCTaGCCTGGAGCTCCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAESEVTI*PGAPGS
Trigger: TGAACCAGGAGCTCCAGGCAAGATCGTGACTTCGGA...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGAGCTCACAACGTGGCTaGCCAGCTCTGAGTAGTCGA +
Preference number: 5 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWSSQRG*PALSSR
Trigger: TCGACTACTCAGAGCTGGCAAGCCACGTTGTGAGCT...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATTTCAGCTGCATAGGTaGCCAGGGCTCCTGAGACAC +
Preference number: 5 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPFQLHR*PGLLRH
Trigger: GTGTCTCAGGAGCCCTGGCAACCTATGCAGCTGAAA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGTCTCCTTTTTCTCCCTaGTGTCCTCGAGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWSPFSP*CPRGPG
Trigger: ACCTGGCCCTCGAGGACACAAGGGAGAAAAAGGAGA...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGGGGCCTGGGGGACCTaGGTCTCCCTTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: IALNLLFLFALAWFSITYGAWGT*VSLGTW
Trigger: CCAGGTCCCAAGGGAGACCAAGGTCCCCCAGGCCCC...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS TCA 90 bp CGTCCTCTGGTTGAAGAAGATGCTTCATACGCATGGCGGGTAACGTaGGTTTTCCTTTCAAAGGTTGAGCCTGGGGAGTTGGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: RPLVEEDASYAWRVT*VFLSKVEPGELGRV
Trigger: CACTCTGCCCAACTCCCCAGGCTCAACCTTTGAAAGGAAAACTCACGTTACCCGCCATGCGTATGAAGCATCTTCTTCAACCAGAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650263.1
CDS-3UTR CAA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGCTCGTGTGCTTCCAGTaGAGTTTATGTAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMLVCFQ*SLCSRC
Trigger: GCAGCGGCTACATAAACTCAACTGGAAGCACACGAG...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGGGATGGGGAGTGTGTaGGAGGAATTCCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: ALNLLFLFALAWFSITYPGMGSV*EEFRVG
Trigger: CCCCACCCGGAATTCCTCCAACACACTCCCCATCCC...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TCTATAGTGCCACGAGCAAAGGCTTATGACAGCAAGTTAATGTGGCTGATAGTCGGGATGGGGAGTGTGTaGGAGGAATTCCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SIVPRAKAYDSKLMWLIVGMGSV*EEFRVG
Trigger: CCCCACCCGGAATTCCTCCAACACACTCCCCATCCC...GACTATCAGCCACATTAACTTGCTGTCATAAGCCTTTGCTCGTGGCACTATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CAA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCAGAGCAGGACGCCATGTaGTTTGGAACTCCGAAGACT +
Preference number: 5 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPEQDAM*FGTPKT
Trigger: AGTCTTCGGAGTTCCAAACAACATGGCGTCCTGCTC...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAGGAACTTGCAGTCCTaGTGCAAAAGGTCATCGCTC +
Preference number: 5 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRRNLQS*CKRSSL
Trigger: GAGCGATGACCTTTTGCACAAGGACTGCAAGTTCCT...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCTCTAGGATCAGGAACTaGCAGTCCTTGTGCAAAAGG +
Preference number: 5 (lower is better)
Translates to: KCHMHYETWSRSCPAMASSRIRN*QSLCKR
Trigger: CCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGA...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GGCTGTAAAGACCTTCCCGCTGTCCTTGGTCATGATGAGCAGCTCCATCTCCTTAGCTCCATCTCCTTCTaGGCAGGTGTGTTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: GCKDLPAVLGHDEQLHLLSSISF*AGVLSF
Trigger: GAAAGACAACACACCTGCCAAGAAGGAGATGGAGCT...AAGGAGATGGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGTCTTTACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp CCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTACCTTCCCGCTGTCCTaGGTCATGATGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSPSWQVCCLSLGSGTCSTFPLS*VMMSSS
Trigger: GGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGT...ACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAACTTCTGAAAAAGAAGTaGCAGCGATGCTGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAELLKKK*QRCWQG
Trigger: CCCCTGCCAGCATCGCTGCAACTTCTTTTTCAGAAG...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATAACACCTGGATCACCTaGGTCTCCCTTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHNTWIT*VSLGTW
Trigger: CCAGGTCCCAAGGGAGACCAAGGTGATCCAGGTGTT...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369733.8
CDS-3UTR CAA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCACACGTACATGGTACTaGATGATCCCCCTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: KCHMHYETWSRSCPAMASTRTWY*MIPLQK
Trigger: CTTCTGAAGGGGGATCATCAAGTACCATGTACGTGT...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCACCGCCCAGCATAGACTaGGTCACCTTTGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPPPSID*VTFVSF
Trigger: AAAGGAGACAAAGGTGACCAAGTCTATGCTGGGCGG...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCACCCTCTGGAGACCTaGGACCTAAGTGCCACATGC +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHHPLET*DLSATC
Trigger: GCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp ATAAGTTTGGAAGAAGTCCATGAGGTCCGCAGTCACGTTGCTGTAGGCAGAGAACACCCTCTGGAGACCTaGGACCTAAGTGCCACATGC +
Preference number: 5 (lower is better)
Translates to: ISLEEVHEVRSHVAVGREHPLET*DLSATC
Trigger: GCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTG...TTCTCTGCCTACAGCAACGTGACTGCGGACCTCATGGACTTCTTCCAAACTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CAA 90 bp GCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCCCTGAGACTTTTCCCTaGGGGTCTGAGTTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: APSPSWQVCCLSLGSGTCPETFP*GSEFSL
Trigger: CAGGGAGAACTCAGACCCCAAGGGAAAAGTCTCAGG...GCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTGGCATCCAGGATCGTaGCATCGTAGGTGCCTGACA +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHWHPGS*HRRCLT
Trigger: TGTCAGGCACCTACGATGCAACGATCCTGGATGCCA...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATACATGGGAGGGAAGGTaGGCATCCAGGATCGTTGCA +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHTWEGR*ASRIVA
Trigger: TGCAACGATCCTGGATGCCAACCTTCCCTCCCATGT...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCGAGCAGGACGCCATGTaGTTTGGAACTCCGAAGACT +
Preference number: 5 (lower is better)
Translates to: APSPSWQVCCLSLGSGTCEQDAM*FGTPKT
Trigger: AGTCTTCGGAGTTCCAAACAACATGGCGTCCTGCTC...GCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACACTGTGCAGCCCAATTTaGTCCAGGTCTGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: SIALNLLFLFALAWFSITLCSPI*SRSAPA
Trigger: GGCGGGAGCAGACCTGGACAAAATTGGGCTGCACAG...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGGTCCTTTGTCACCTTaGACACCAGGAAGTCCTACT +
Preference number: 5 (lower is better)
Translates to: VKDQLRPVPQVPFSECRMGPLSP*TPGSPT
Trigger: AGTAGGACTTCCTGGTGTCAAAGGTGACAAAGGACC...CATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp AAGTGCCACATGCATTATGAGACCTGGTCCAGGAGCTGTCCTGCCATGGCTAGCAATGGCTCCATAAGTTaGGAAGAAGTCCATGAGGTC +
Preference number: 5 (lower is better)
Translates to: KCHMHYETWSRSCPAMASNGSIS*EEVHEV
Trigger: GACCTCATGGACTTCTTCCAAACTTATGGAGCCATT...GCTAGCCATGGCAGGACAGCTCCTGGACCAGGTCTCATAATGCATGTGGCACTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGGGGCCCCTGTCACCTTaGGGTCCTGGAGTGCCCATC +
Preference number: 5 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQGPLSP*GPGVPI
Trigger: GATGGGCACTCCAGGACCCAAAGGTGACAGGGGCCC...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTGGGCCCCTGTCACCTTaGGGTCCTGGAGTGCCCATC +
Preference number: 5 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSGPLSP*GPGVPI
Trigger: GATGGGCACTCCAGGACCCAAAGGTGACAGGGGCCC...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGTGGCTAGCTCACGGCTaGACAGCAATACTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWWLAHG*TAILLL
Trigger: GAGAAGAAGTATTGCTGTCAAGCCGTGAGCTAGCCA...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCAGAAACCTGGGAGGCCTaGCTCGCCTTGGTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: ALNLLFLFALAWFSITYPETWEA*LALVSS
Trigger: AGAGGACACCAAGGCGAGCAAGGCCTCCCAGGTTTC...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CAA 90 bp CTCACACTTGCCGATCGACTCCCCTTGAGCAAACGCTTAACATCATCCAATTCTGCCGATCGACTCCCCTaGAGCAAACGCTTAACATCA +
Preference number: 5 (lower is better)
Translates to: LTLADRLPLSKRLTSSNSADRLP*SKRLTS
Trigger: TGATGTTAAGCGTTTGCTCAAGGGGAGTCGATCGGC...AGAATTGGATGATGTTAAGCGTTTGCTCAAGGGGAGTCGATCGGCAAGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CAA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAGGGATGGGGAGTGTGTaGGAGGAATTCCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: NISMNSSMGLRTIIATIRGMGSV*EEFRVG
Trigger: CCCCACCCGGAATTCCTCCAACACACTCCCCATCCC...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATTCCACAGTGCCTTTCTaGGGGATGGGGAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYSTVPF*GMGSVL
Trigger: CAACACACTCCCCATCCCCAAGAAAGGCACTGTGGA...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATTGGCATCCAGGATCGTaGCATCGTAGGTGCCTGACA +
Preference number: 5 (lower is better)
Translates to: AFVDMAEAGFCFSNANANWHPGS*HRRCLT
Trigger: TGTCAGGCACCTACGATGCAACGATCCTGGATGCCA...ATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAACATGGGAGGGAAGGTaGGCATCCAGGATCGTTGCA +
Preference number: 5 (lower is better)
Translates to: DMAEAGFCFSNANANHLGTWEGR*ASRIVA
Trigger: TGCAACGATCCTGGATGCCAACCTTCCCTCCCATGT...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGTCTAGGATCAGGAACTaGCAGTCCTTGTGCAAAAGG +
Preference number: 5 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWSRIRN*QSLCKR
Trigger: CCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGA...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTCCTTGTCTTCTGAAAAAGAAGTaGCAGCGATGCTGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: PSWQVCCLSLGSGTCSPCLLKKK*QRCWQG
Trigger: CCCCTGCCAGCATCGCTGCAACTTCTTTTTCAGAAG...ACAAGGACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTGCCCAGGGGGTCCTaGAATGGCTCCATAAGTTTG +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHLPRGS*NGSISL
Trigger: CAAACTTATGGAGCCATTCAAGGACCCCCTGGGCAA...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCACACCCTCTGGAGACCTaGGACCTAAGTGCCACATGC +
Preference number: 5 (lower is better)
Translates to: ALNLLFLFALAWFSITYPHPLET*DLSATC
Trigger: GCATGTGGCACTTAGGTCCAAGGTCTCCAGAGGGTG...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGTGTCTCAGTAGGACATaGACAGACTCCAGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWCLSRT*TDSSFH
Trigger: GTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACA...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGATTCCTTCCTTGTCCATaGCCCTCAACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRFLPCP*PSTFFF
Trigger: GAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGAA...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAATGGCCCTTTATTCCTTCCTaGTCCATTGCCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: LKTNCAQSPKCHFLSAEWPFIPS*SIALNL
Trigger: AAGGTTGAGGGCAATGGACAAGGAAGGAATAAAGGG...CCATTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp GCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACACGAATTGGAAACAACTTaGAATAAATCCCCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AFITHSQVWLMLLARGPHELETT*NKSPSL
Trigger: GAGAGAGGGGGATTTATTCAAAGTTGTTTCCAATTC...GTGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp TGCAAATGCAAATCACCTAGGAAGCTTGTTGAACTGCAGCTTCTGACTCAGCAGCCCGTGGACCACACTTaGAGTAGCAAGGTCTCCGAA +
Preference number: 5 (lower is better)
Translates to: CKCKSPRKLVELQLLTQQPVDHT*SSKVSE
Trigger: TTCGGAGACCTTGCTACTCAAAGTGTGGTCCACGGG...CTGCTGAGTCAGAAGCTGCAGTTCAACAAGCTTCCTAGGTGATTTGCATTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp ATCCAATTCTGTCCATCGGGTGGATGGGGACGCACTCTGCAGTCGAACTCGAATGACTCCGTCCTCTGGTaGAAGAAGATGCATTTCTAT +
Preference number: 5 (lower is better)
Translates to: IQFCPSGGWGRTLQSNSNDSVLW*KKMHFY
Trigger: ATAGAAATGCATCTTCTTCAACCAGAGGACGGAGTC...ATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGATGGACAGAATTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGTAAAACACCAGAGCTaGGGCACAGGAAGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHVKHQS*GTGSRD
Trigger: ATCCCTGCTTCCTGTGCCCAAGCTCTGGTGTTTTAC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS-3UTR CAA 90 bp TGCTTTTATAACACACTCCCAGGTGTGGCTGATGCTGCTGGCCCGTGGACCACATCAGTTCCATCTCGTTaGTTTTTCTTGGTTACATCC +
Preference number: 5 (lower is better)
Translates to: CFYNTLPGVADAAGPWTTSVPSR*FFLVTS
Trigger: GGATGTAACCAAGAAAAACAAACGAGATGGAACTGA...TGTGGTCCACGGGCCAGCAGCATCAGCCACACCTGGGAGTGTGTTATAAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGCCGATCGACTCCCCTaGAGCAAACGCTTAACATCA +
Preference number: 5 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYADRLP*SKRLTS
Trigger: TGATGTTAAGCGTTTGCTCAAGGGGAGTCGATCGGC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCTCGCTGTCACAATTTaGGTCTCCACAGTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHLAVTI*VSTVPF
Trigger: GAAAGGCACTGTGGAGACCAAAATTGTGACAGCGAG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCATCGCTCTGCACACTaGTGGTGCAGGCGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: YILFRLKQMLLARLAVLSHRSAH*WCRRRR
Trigger: CCTCCGCCGCCTGCACCACAAGTGTGCAGAGCGATG...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GCAGCTCCATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTCTAGGATCAGGAACTaGCAGTCCTTGTGCAAAAGG +
Preference number: 5 (lower is better)
Translates to: AAPSPSWQVCCLSLGSGTSRIRN*QSLCKR
Trigger: CCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGA...AGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGATGGAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS-3UTR CAA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATCTTCTGAAAAAGAAGTaGCAGCGATGCTGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYLLKKK*QRCWQG
Trigger: CCCCTGCCAGCATCGCTGCAACTTCTTTTTCAGAAG...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAAGCTTGCTTCTGAAAAAGAAGTaGCAGCGATGCTGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: AEAGFCFSNANANHLGSLLLKKK*QRCWQG
Trigger: CCCCTGCCAGCATCGCTGCAACTTCTTTTTCAGAAG...CAAGCTTCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACCTGTGCAGCCCAATTTaGTCCAGGTCTGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNLCSPI*SRSAPA
Trigger: GGCGGGAGCAGACCTGGACAAAATTGGGCTGCACAG...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATGGTCCTTTGTCACCTTaGACACCAGGAAGTCCTACT +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHGPLSP*TPGSPT
Trigger: AGTAGGACTTCCTGGTGTCAAAGGTGACAAAGGACC...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATGGTCCCATTGGTCCTTaGTCACCTTTGACACCAGGA +
Preference number: 5 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYGPIGP*SPLTPG
Trigger: TCCTGGTGTCAAAGGTGACAAAGGACCAATGGGACC...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCACCCTGGTCACCTTaGGGTCCTGGTGGTCCCATT +
Preference number: 5 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNISPWSP*GPGGPI
Trigger: AATGGGACCACCAGGACCCAAAGGTGACCAGGGTGA...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATTTGCCCAGGGGGTCCTaGAATGGCTCCATAAGTTTG +
Preference number: 5 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYLPRGS*NGSISL
Trigger: CAAACTTATGGAGCCATTCAAGGACCCCCTGGGCAA...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATCTCCTTTTTCTCCCTaGTGTCCTCGAGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: SIALNLLFLFALAWFSITSPFSP*CPRGPG
Trigger: ACCTGGCCCTCGAGGACACAAGGGAGAAAAAGGAGA...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAGACTAAAACAAATGTaGCTAGCTAGGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRRLKQM*LARLAV
Trigger: CACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCT...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAAACCTTCTTTTTCTGTTaGCTCTGGCCTGGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: WLKTNCAQSPKCHFLSAETFFFC*LWPGSV
Trigger: TACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGT...TTCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGAGGGATGAGCTCTGGGTaGTCATGTTGTTGTGATAGG +
Preference number: 5 (lower is better)
Translates to: DMAEAGFCFSNANANHLGGMSSG*SCCCDR
Trigger: CCTATCACAACAACATGACAACCCAGAGCTCATCCC...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAGCTCCATCTCCTTCTaGGCAGGTGTGTTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYSSISF*AGVLSF
Trigger: GAAAGACAACACACCTGCCAAGAAGGAGATGGAGCT...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGACCTTCCCGCTGTCCTaGGTCATGATGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQTFPLS*VMMSSS
Trigger: GGAGCTGCTCATCATGACCAAGGACAGCGGGAAGGT...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCCACGCTGCCTTTTaGACCCTTTGGTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNISHAAF*TLWSLW
Trigger: CCACAAGGACCAAAGGGTCAAAAAGGCAGCGTGGGA...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAGGTCCCATTGGTCCTTaGTCACCTTTGACACCAGGA +
Preference number: 5 (lower is better)
Translates to: SIALNLLFLFALAWFSITGPIGP*SPLTPG
Trigger: TCCTGGTGTCAAAGGTGACAAAGGACCAATGGGACC...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGAAGTCACGATCTaGCCTGGAGCTCCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNISEVTI*PGAPGS
Trigger: TGAACCAGGAGCTCCAGGCAAGATCGTGACTTCGGA...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCCCGCCCAGCATAGACTaGGTCACCTTTGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: CPQPSFSVCSGLVQYNISPPSID*VTFVSF
Trigger: AAAGGAGACAAAGGTGACCAAGTCTATGCTGGGCGG...GGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATCCCTTTATTCCTTCCTaGTCCATTGCCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHPFIPS*SIALNL
Trigger: AAGGTTGAGGGCAATGGACAAGGAAGGAATAAAGGG...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp GTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATTTTCTGAGTGCAGAGAATTGGAAACAACTTaGAATAAATCCCCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: VVKDQLRPVPQVPFSECRELETT*NKSPSL
Trigger: GAGAGAGGGGGATTTATTCAAAGTTGTTTCCAATTC...TCTGCACTCAGAAAATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CAA 90 bp TGGCACAGCCTTAGAACAGTAACCAGAACACACCCCCATCAAGTGTCACCTCCATCAGTTCCATCTCGTTaGTTTTTCTTGGTTACATCC +
Preference number: 5 (lower is better)
Translates to: WHSLRTVTRTHPHQVSPPSVPSR*FFLVTS
Trigger: GGATGTAACCAAGAAAAACAAACGAGATGGAACTGA...TGGAGGTGACACTTGATGGGGGTGTGTTCTGGTTACTGTTCTAAGGCTGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp AATGCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAGACTCCGTCCTCTGGTaGAAGAAGATGCAAATTCCT +
Preference number: 5 (lower is better)
Translates to: NAFVDMAEAGFCFSNANADSVLW*KKMQIP
Trigger: AGGAATTTGCATCTTCTTCAACCAGAGGACGGAGTC...TGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTCCACAGTGCCTTTCTaGGGGATGGGGAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: IALNLLFLFALAWFSITYSTVPF*GMGSVL
Trigger: CAACACACTCCCCATCCCCAAGAAAGGCACTGTGGA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAAATCACCTAGGATTCTTGGCAGGTGTGTaGTCTTTCTCTAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: DMAEAGFCFSNANANHLGFLAGV*SFSRIR
Trigger: CCTGATCCTAGAGAAAGACAACACACCTGCCAAGAA...TCCTAGGTGATTTGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTTCTGCAGTGGTGGTCTaGCCCTTTGTGGACACAGTC +
Preference number: 5 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSSAVVV*PFVDTV
Trigger: GACTGTGTCCACAAAGGGCAAGACCACCACTGCAGA...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTCTGCAGTGGTGGTCTaGCCCTTTGTGGACACAGTC +
Preference number: 5 (lower is better)
Translates to: IALNLLFLFALAWFSITYSAVVV*PFVDTV
Trigger: GACTGTGTCCACAAAGGGCAAGACCACCACTGCAGA...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATAGCTCACAACGTGGCTaGCCAGCTCTGAGTAGTCGA +
Preference number: 5 (lower is better)
Translates to: IALNLLFLFALAWFSITYSSQRG*PALSSR
Trigger: TCGACTACTCAGAGCTGGCAAGCCACGTTGTGAGCT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGTTTCAGCTGCATAGGTaGCCAGGGCTCCTGAGACAC +
Preference number: 5 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQFQLHR*PGLLRH
Trigger: GTGTCTCAGGAGCCCTGGCAACCTATGCAGCTGAAA...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTAGACATTGAAAAGTGGTTAAAGACCAACTGCGCCCAGTCCCCCAAGTGCCATAATGGCTCCATAAGTTaGGAAGAAGTCCATGAGGTC +
Preference number: 5 (lower is better)
Translates to: LDIEKWLKTNCAQSPKCHNGSIS*EEVHEV
Trigger: GACCTCATGGACTTCTTCCAAACTTATGGAGCCATT...ATGGCACTTGGGGGACTGGGCGCAGTTGGTCTTTAACCACTTTTCAATGTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGAACTGGACCCTGAGGTaGAGAAACCTGGGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQNWTLR*RNLGGL
Trigger: AAGGCCTCCCAGGTTTCTCAACCTCAGGGTCCAGTT...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CAA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACACACCTGGATCACCTTaGTCACCTTTGGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNTPGSP*SPLGPW
Trigger: CCAGGGACCCAAAGGTGACAAAGGTGATCCAGGTGT...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CAA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGGGATGAGCTCTGGGTaGTCATGTTGTTGTGATAGG +
Preference number: 5 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIGMSSG*SCCCDR
Trigger: CCTATCACAACAACATGACAACCCAGAGCTCATCCC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTGAGCAGGACGCCATGTaGTTTGGAACTCCGAAGACT +
Preference number: 5 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSEQDAM*FGTPKT
Trigger: AGTCTTCGGAGTTCCAAACAACATGGCGTCCTGCTC...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATTCTTGGCAGGTGTGTaGTCTTTCTCTAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: ALNLLFLFALAWFSITYPFLAGV*SFSRIR
Trigger: CCTGATCCTAGAGAAAGACAACACACCTGCCAAGAA...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAAGCTCCATCTCCTTCTaGGCAGGTGTGTTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNISSISF*AGVLSF
Trigger: GAAAGACAACACACCTGCCAAGAAGGAGATGGAGCT...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTTGGTGGTCTTGCCCTTaGTGGACACAGTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSWWSCP*WTQSSG
Trigger: ACCTGAAGACTGTGTCCACAAAGGGCAAGACCACCA...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACATGCCTTTTTGACCCTTaGGTCCTTGTGGACCTGGGT +
Preference number: 5 (lower is better)
Translates to: QYNISMNSSMGLRTIIATCLFDP*VLVDLG
Trigger: ACCCAGGTCCACAAGGACCAAAGGGTCAAAAAGGCA...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTCATCCCAGTAAGACCTaGTTCACCTCTTGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSHPSKT*FTSWAL
Trigger: CAAGGCCCAAGAGGTGAACAAGGTCTTACTGGGATG...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAAGGAAGGTTTCTGAGTaGGACAGGAACGATCCTGGT +
Preference number: 5 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIRKVSE*DRNDPG
Trigger: ACCAGGATCGTTCCTGTCCAACTCAGAAACCTTCCT...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGCCGCCCAGCATAGACTaGGTCACCTTTGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQPPSID*VTFVSF
Trigger: AAAGGAGACAAAGGTGACCAAGTCTATGCTGGGCGG...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCGCCCAGCATAGACTaGGTCACCTTTGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: IALNLLFLFALAWFSITYPPSID*VTFVSF
Trigger: AAAGGAGACAAAGGTGACCAAGTCTATGCTGGGCGG...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGGCTAGCTCACGGCTaGACAGCAATACTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIWLAHG*TAILLL
Trigger: GAGAAGAAGTATTGCTGTCAAGCCGTGAGCTAGCCA...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATAGACTCCGTCCTCTGGTaGAAGAAGATGCAAATTCCT +
Preference number: 5 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIDSVLW*KKMQIP
Trigger: AGGAATTTGCATCTTCTTCAACCAGAGGACGGAGTC...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTCTCGCTGTCACAATTTaGGTCTCCACAGTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSLAVTI*VSTVPF
Trigger: GAAAGGCACTGTGGAGACCAAAATTGTGACAGCGAG...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTGGGATGAGCTCTGGGTaGTCATGTTGTTGTGATAGG +
Preference number: 5 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSGMSSG*SCCCDR
Trigger: CCTATCACAACAACATGACAACCCAGAGCTCATCCC...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAAGGACGCCATGTTGTTaGGAACTCCGAAGACTGATC +
Preference number: 5 (lower is better)
Translates to: NISMNSSMGLRTIIATIRRTPCC*ELRRLI
Trigger: GATCAGTCTTCGGAGTTCCAAACAACATGGCGTCCT...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATAGGAACTTGCAGTCCTaGTGCAAAAGGTCATCGCTC +
Preference number: 5 (lower is better)
Translates to: IALNLLFLFALAWFSITYRNLQS*CKRSSL
Trigger: GAGCGATGACCTTTTGCACAAGGACTGCAAGTTCCT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATTCTTGGCAGGTGTGTaGTCTTTCTCTAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: HCPQPSFSVCSGLVQYNIFLAGV*SFSRIR
Trigger: CCTGATCCTAGAGAAAGACAACACACCTGCCAAGAA...TATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGCATCCCAGTAAGACCTaGTTCACCTCTTGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMHPSKT*FTSWAL
Trigger: CAAGGCCCAAGAGGTGAACAAGGTCTTACTGGGATG...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGAGGAAGGTTTCTGAGTaGGACAGGAACGATCCTGGT +
Preference number: 5 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQRKVSE*DRNDPG
Trigger: ACCAGGATCGTTCCTGTCCAACTCAGAAACCTTCCT...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp CCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTTGGCTAGCTCACGGCTaGACAGCAATACTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: PSFSVCSGLVQYNISMNSWLAHG*TAILLL
Trigger: GAGAAGAAGTATTGCTGTCAAGCCGTGAGCTAGCCA...AGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACAACCTTCTTTTTCTGTTaGCTCTGGCCTGGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: SIALNLLFLFALAWFSITTFFFC*LWPGSV
Trigger: TACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGT...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp GCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATTCCTTCCTTGTCCATaGCCCTCAACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ALNLLFLFALAWFSITYPFLPCP*PSTFFF
Trigger: GAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGAA...TGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS TCA 90 bp AAGGCTTCTAATCTACCCAGAAAACTCACTTCCAACTGCAGGAAATaGATCAGAGACAAGGTTCAATCCATGGCAATACCTTTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: KASNLPRKLTSNCRK*IRDKVQSMAIPLGP
Trigger: TGGCCCTAAAGGTATTGCCATGGATTGAACCTTGTCTCTGATTCATTTCCTGCAGTTGGAAGTGAGTTTTCTGGGTAGATTAGAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480127.2
CDS-3UTR CAA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATTCAGTTCCATCTCGTTaGTTTTTCTTGGTTACATCC +
Preference number: 5 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYSVPSR*FFLVTS
Trigger: GGATGTAACCAAGAAAAACAAACGAGATGGAACTGA...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATGACTCCGTCCTCTGGTaGAAGAAGATGCAAATTCCT +
Preference number: 5 (lower is better)
Translates to: IALNLLFLFALAWFSITYDSVLW*KKMQIP
Trigger: AGGAATTTGCATCTTCTTCAACCAGAGGACGGAGTC...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTGCCGATCGACTCCCCTaGAGCAAACGCTTAACATCA +
Preference number: 5 (lower is better)
Translates to: YILFRLKQMLLARLAVLSADRLP*SKRLTS
Trigger: TGATGTTAAGCGTTTGCTCAAGGGGAGTCGATCGGC...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATACACGTACATGGTACTaGATGATCCCCCTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: IALNLLFLFALAWFSITYTRTWY*MIPLQK
Trigger: CTTCTGAAGGGGGATCATCAAGTACCATGTACGTGT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS-3UTR CAA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGTGGCTAGCTCACGGCTaGACAGCAATACTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMWLAHG*TAILLL
Trigger: GAGAAGAAGTATTGCTGTCAAGCCGTGAGCTAGCCA...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp CAGTATAACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACACCCTTTATTCCTTCCTaGTCCATTGCCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: QYNISMNSSMGLRTIIATPFIPS*SIALNL
Trigger: AAGGTTGAGGGCAATGGACAAGGAAGGAATAAAGGG...TGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTTATACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACCCCTTTATTCCTTCCTaGTCCATTGCCCTCAACCTT +
Preference number: 5 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNPFIPS*SIALNL
Trigger: AAGGTTGAGGGCAATGGACAAGGAAGGAATAAAGGG...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000433822.1
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp AATGCCTTCGTAGACATGGCAGAGGCAGGCTTTTGCTTCAGTAATGCAAATGCAACCTGGTTTGAGGTTTaGAAGGAATTGGAAACAACT +
Preference number: 5 (lower is better)
Translates to: NAFVDMAEAGFCFSNANATWFEV*KELETT
Trigger: AGTTGTTTCCAATTCCTTCAAAACCTCAAACCAGGT...TGCATTTGCATTACTGAAGCAAAAGCCTGCCTCTGCCATGTCTACGAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393211.3
CDS-3UTR CAA 90 bp CTTGTCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATACCTGGTTTGAGGTTTaGAAGGAATTGGAAACAACT +
Preference number: 5 (lower is better)
Translates to: LVHCPQPSFSVCSGLVQYTWFEV*KELETT
Trigger: AGTTGTTTCCAATTCCTTCAAAACCTCAAACCAGGT...ATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS-3UTR CAA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGAATGGCTCCATAAGTTaGGAAGAAGTCCATGAGGTC +
Preference number: 5 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQNGSIS*EEVHEV
Trigger: GACCTCATGGACTTCTTCCAAACTTATGGAGCCATT...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTAGTATGTGTCTCAGTAGGACATaGACAGACTCCAGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: FSVCSGLVQYNISMNSSMCLSRT*TDSSFH
Trigger: GTGAAAGCTGGAGTCTGTCAATGTCCTACTGAGACA...CATACTAGAGTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp AACATATCCATGAACTCTAGTATGGGCCTACGGACAATCATAGCTACAATCAGAACCTTCTTTTTCTGTTaGCTCTGGCCTGGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: NISMNSSMGLRTIIATIRTFFFC*LWPGSV
Trigger: TACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGT...TCTGATTGTAGCTATGATTGTCCGTAGGCCCATACTAGAGTTCATGGATATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp ATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTCAGTTCCTTCCTTGTCCATaGCCCTCAACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ILFRLKQMLLARLAVLSQFLPCP*PSTFFF
Trigger: GAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGAA...CTGAGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp ATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATAGACTAAAACAAATGTaGCTAGCTAGGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: IALNLLFLFALAWFSITYRLKQM*LARLAV
Trigger: CACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCT...ATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp TCCATTGCCCTCAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATCTCATTCTAAAACATaGCAACTACTGTTAGAGTCC +
Preference number: 5 (lower is better)
Translates to: SIALNLLFLFALAWFSITSHSKT*QLLLES
Trigger: GGACTCTAACAGTAGTTGCAATGTTTTAGAATGAGA...TGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTGAGGGCAATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS TCA 90 bp TGGTTGAAGAAGATGCATTTCTATAGTGCCACGAGCAAAGGCTTATaGCAGCAAGTTAATGTGGCTGATAGTCCCCTTAATATGCAAATT +
Preference number: 5 (lower is better)
Translates to: WLKKMHFYSATSKGL*QQVNVADSPLNMQI
Trigger: AATTTGCATATTAAGGGGACTATCAGCCACATTAACTTGCTGTCATAAGCCTTTGCTCGTGGCACTATAGAAATGCATCTTCTTCAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS-3UTR CAA 90 bp TATATATTGTTCAGACTAAAACAAATGTTGCTAGCTAGGTTGGCTGTGCTGTCTTTCCTTCCTTGTCCATaGCCCTCAACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: YILFRLKQMLLARLAVLSFLPCP*PSTFFF
Trigger: GAAAAAGAAGGTTGAGGGCAATGGACAAGGAAGGAA...AGACAGCACAGCCAACCTAGCTAGCAACATTTGTTTTAGTCTGAACAATATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS-3UTR CAA 90 bp CAACCTTCTTTTTCTGTTTGCTCTGGCCTGGTTCAGTATAACATATCCATGAACTCTCATTCTAAAACATaGCAACTACTGTTAGAGTCC +
Preference number: 5 (lower is better)
Translates to: QPSFSVCSGLVQYNISMNSHSKT*QLLLES
Trigger: GGACTCTAACAGTAGTTGCAATGTTTTAGAATGAGA...GTTCATGGATATGTTATACTGAACCAGGCCAGAGCAAACAGAAAAAGAAGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS CCA 72 bp GAGGTCCCATGGGGCCTTCTCGCCCTCTCTGGCCCATaGGGCCTTCCATGCCAGGATCTCCCACGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: EVPWGLLALSGP*GLPCQDLPRCL
Trigger: AAGGCAGCGTGGGAGATCCTGGCATGGAAGGCCCCATGGGCCAGAGAGGGCGAGAAGGCCCCATGGGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS CCA 72 bp CATGCCGCCTTCTGCTGCTGCCCCATAGCCTCCGCCTaGGCCGATGTCAGTGCCATAGGGACCCCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: HAAFCCCPIASA*ADVSAIGTPVS
Trigger: GGAGACAGGGGTCCCTATGGCACTGACATCGGCCCAGGCGGAGGCTATGGGGCAGCAGCAGAAGGCGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS TCA 72 bp GCGCCTTCAGCTTCCTCACCTCCTCCGCCAGAGCAATaGGGCCGAAGAGCAGCCCCAGGAGTAGCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: APSASSPPPPEQ*GRRAAPGVAAR
Trigger: CCTGGCTGCTACTCCTGGGGCTGCTCTTCGGCCTCATTGCTCTGGCGGAGGAGGTGAGGAAGCTGAAGGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000648076.2
ENST00000650263.1
CDS GCA 72 bp TCCGCCATTGCCAGCATACATGCCGCCTTCTGCTGCTaGCCCATAGCCTCCGCCTGGGCCGATGTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: SAIASIHAAFCC*PIASAWADVSA
Trigger: GGCACTGACATCGGCCCAGGCGGAGGCTATGGGGCAGCAGCAGAAGGCGGCATGTATGCTGGCAATGGCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS CCA 72 bp GTCCAAAGACAGGAGGGACCCATCTCCACTGGCTCCTaGTGGCCCTGGCGGACCCCGAGGGCCCATCAAGTA +
Preference number: 6 (lower is better)
Translates to: VQRQEGPISTGS*WPWRTPRAHQV
Trigger: TACTTGATGGGCCCTCGGGGTCCGCCAGGGCCACCAGGAGCCAGTGGAGATGGGTCCCTCCTGTCTTTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS CCA 72 bp GATGAGCTGTGTGAGGAGGAGCTGCTACCCCGACTGTaGGAGGCATCCGTGGACAGGAGGCGGCTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: DELCEEELLPRL*EASVDRRRLSP
Trigger: TGGGGACAGCCGCCTCCTGTCCACGGATGCCTCCCACAGTCGGGGTAGCAGCTCCTCCTCACACAGCTCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS GCA 72 bp TGGGCCGATGTCAGTGCCATAGGGACCCCTGTCTCCTaGAGCTTCACCAAAGGCACCGCCTGCACCCAGGGA +
Preference number: 6 (lower is better)
Translates to: WADVSAIGTPVS*SFTKGTACTQG
Trigger: TCCCTGGGTGCAGGCGGTGCCTTTGGTGAAGCTGCAGGAGACAGGGGTCCCTATGGCACTGACATCGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS GCA 72 bp CTGCTGCCCCATAGCCTCCGCCTGGGCCGATGTCAGTaGCATAGGGACCCCTGTCTCCTGCAGCTTCACCAA +
Preference number: 6 (lower is better)
Translates to: LLPHSLRLGRCQ*HRDPCLLQLHQ
Trigger: TTGGTGAAGCTGCAGGAGACAGGGGTCCCTATGGCACTGACATCGGCCCAGGCGGAGGCTATGGGGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS CCA 72 bp TGTGATAGGTCCCCATGGAGGACCCCGCGGGCAGGGTaGAGGACCACACATGGGAGGGAAGGTTGGCATCCA +
Preference number: 6 (lower is better)
Translates to: CDRSPWRTPRAG*RTTHGREGWHP
Trigger: TGGATGCCAACCTTCCCTCCCATGTGTGGTCCTCCACCCTGCCCGCGGGGTCCTCCATGGGGACCTATCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS TCA 72 bp TTGGGACCCACAGAACCTGGGACACCAGGTGGGCCATaGGGACCTGGTTCACCAGCAGCCCCTCTTTCCCCT +
Preference number: 6 (lower is better)
Translates to: LGPTEPGTPGGP*GPGSPAAPLSP
Trigger: AGGGGAAAGAGGGGCTGCTGGTGAACCAGGTCCTCATGGCCCACCTGGTGTCCCAGGTTCTGTGGGTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS CCA 72 bp CATGCCAGGATCTCCCACGCTGCCTTTTTGACCCTTTaGTCCTTGTGGACCTGGGTGGCCCAAGGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: HARISHAAFLTL*SLWTWVAQGPR
Trigger: CCTGGGCCCTTGGGCCACCCAGGTCCACAAGGACCAAAGGGTCAAAAAGGCAGCGTGGGAGATCCTGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000648076.2
ENST00000650263.1
CDS CAA 72 bp CCATGCCAGGATCTCCCACGCTGCCTTTTTGACCCTTaGGTCCTTGTGGACCTGGGTGGCCCAAGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: PCQDLPRCLFDP*VLVDLGGPRAQ
Trigger: CTGGGCCCTTGGGCCACCCAGGTCCACAAGGACCAAAGGGTCAAAAAGGCAGCGTGGGAGATCCTGGCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000648076.2
ENST00000650263.1
CDS TCA 72 bp GGGCCTTCCATGCCAGGATCTCCCACGCTGCCTTTTTaGCCCTTTGGTCCTTGTGGACCTGGGTGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: GPSMPGSPTLPF*PFGPCGPGWPK
Trigger: CTTGGGCCACCCAGGTCCACAAGGACCAAAGGGTCAAAAAGGCAGCGTGGGAGATCCTGGCATGGAAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000648076.2
ENST00000650263.1
CDS GCA 72 bp CTCACGAACATCCAGAGCTCCTCCTGGCTGTCACTGTaGAGCCCAATTTTGTCCAGGTCTGCTCCCGCCGCG +
Preference number: 6 (lower is better)
Translates to: LTNIQSSSWLSL*SPILSRSAPAA
Trigger: CGCGGCGGGAGCAGACCTGGACAAAATTGGGCTGCACAGTGACAGCCAGGAGGAGCTCTGGATGTTCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000480127.2
ENST00000648076.2
ENST00000650263.1
CDS GCA 72 bp AGTCAGCTCCCAATAGTCCGCCATTGCCAGCATACATaGCGCCTTCTGCTGCTGCCCCATAGCCTCCGCCTG +
Preference number: 6 (lower is better)
Translates to: SQLPIVRHCQHT*RLLLLPHSLRL
Trigger: CAGGCGGAGGCTATGGGGCAGCAGCAGAAGGCGGCATGTATGCTGGCAATGGCGGACTATTGGGAGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000647647.1
ENST00000648076.2
CDS CCA 72 bp CGGGCAGGGTGGAGGACCACACATGGGAGGGAAGGTTaGCATCCAGGATCGTTGCATCGTAGGTGCCTGACA +
Preference number: 6 (lower is better)
Translates to: RAGWRTTHGREG*HPGSLHRRCLT
Trigger: TGTCAGGCACCTACGATGCAACGATCCTGGATGCCAACCTTCCCTCCCATGTGTGGTCCTCCACCCTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS CCA 72 bp TTGACACCAGGAAGTCCTACTTCACCTCGGAGCCCTTaGAGACCTACAGGACCTGGAGGGCCCTGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: LTPGSPTSPRSP*RPTGPGGPCGP
Trigger: TGGCCCACAGGGCCCTCCAGGTCCTGTAGGTCTCCAAGGGCTCCGAGGTGAAGTAGGACTTCCTGGTGTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS CCA 72 bp AAGACCTTGTTCACCTCTTGGGCCTTGGTGTCCGTCTaGGCCAGCAGGACCCATTGCTCCTTTAGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: KTLFTSWALVSV*ASRTHCSFSPG
Trigger: CCCGGGGCTAAAGGAGCAATGGGTCCTGCTGGCCCAGACGGACACCAAGGCCCAAGAGGTGAACAAGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS CAA 72 bp GGGGCCTTCCATGCCAGGATCTCCCACGCTGCCTTTTaGACCCTTTGGTCCTTGTGGACCTGGGTGGCCCAA +
Preference number: 6 (lower is better)
Translates to: GAFHARISHAAF*TLWSLWTWVAQ
Trigger: TTGGGCCACCCAGGTCCACAAGGACCAAAGGGTCAAAAAGGCAGCGTGGGAGATCCTGGCATGGAAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000648076.2
ENST00000650263.1
CDS CAA 72 bp TTTGACACCAGGAAGTCCTACTTCACCTCGGAGCCCTaGGAGACCTACAGGACCTGGAGGGCCCTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: FDTRKSYFTSEP*ETYRTWRALWA
Trigger: GGCCCACAGGGCCCTCCAGGTCCTGTAGGTCTCCAAGGGCTCCGAGGTGAAGTAGGACTTCCTGGTGTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS CAA 90 bp GGGTGGAGGACCACACATGGGAGGGAAGGTTGGCATCCAGGATCGTaGCATCGTAGGTGCCTGACACCGACTGGGAGCTCGCTGTCACAA +
Preference number: 6 (lower is better)
Translates to: GWRTTHGREGWHPGS*HRRCLTPTGSSLSQ
Trigger: TTGTGACAGCGAGCTCCCAGTCGGTGTCAGGCACCTACGATGCAACGATCCTGGATGCCAACCTTCCCTCCCATGTGTGGTCCTCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS CCA 72 bp AGCTCTGGGTTGTCATGTTGTTGTGATAGGTCCCCATaGAGGACCCCGCGGGCAGGGTGGAGGACCACACAT +
Preference number: 6 (lower is better)
Translates to: SSGLSCCCDRSP*RTPRAGWRTTH
Trigger: ATGTGTGGTCCTCCACCCTGCCCGCGGGGTCCTCCATGGGGACCTATCACAACAACATGACAACCCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS CAA 72 bp ACCACACATGGGAGGGAAGGTTGGCATCCAGGATCGTaGCATCGTAGGTGCCTGACACCGACTGGGAGCTCG +
Preference number: 6 (lower is better)
Translates to: TTHGREGWHPGS*HRRCLTPTGSS
Trigger: CGAGCTCCCAGTCGGTGTCAGGCACCTACGATGCAACGATCCTGGATGCCAACCTTCCCTCCCATGTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS CAA 90 bp CCCTCGCCTGAGACTTTTCCCTTGGGGTCTGAGTTCTCCCTGTGGTaGAAGGCAGGTTCTGTGCAACCCTGTGCCTCTGCTTCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: PSPETFPLGSEFSLW*KAGSVQPCASASEL
Trigger: CAGCTCAGAAGCAGAGGCACAGGGTTGCACAGAACCTGCCTTCAACCACAGGGAGAACTCAGACCCCAAGGGAAAAGTCTCAGGCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488320.1
ENST00000649118.1
CDS GCA 72 bp CAATTTTGTCCAGGTCTGCTCCCGCCGCGGGTGCCATaGCCTGGAGGCGGTCCTTTTCTATTCTATCCATGC +
Preference number: 6 (lower is better)
Translates to: QFCPGLLPPRVP*PGGGPFLFYPC
Trigger: GCATGGATAGAATAGAAAAGGACCGCCTCCAGGGCATGGCACCCGCGGCGGGAGCAGACCTGGACAAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000480127.2
ENST00000648076.2
ENST00000650263.1
CDS CCA 72 bp AAGTGGTGGTGGTGCCATGGGACAGGGTGGTCAAGCTaGGGGCCAGATTGTTCTGCATGCCAAACACTGAGG +
Preference number: 6 (lower is better)
Translates to: KWWWCHGTGWSS*GPDCSACQTLR
Trigger: CCTCAGTGTTTGGCATGCAGAACAATCTGGCCCCCAGCTTGACCACCCTGTCCCATGGCACCACCACCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000650263.1
CDS CCA 72 bp CCCTTCAGAAGGACCACTAGGAATGCCAAGAGCCCCTaGAACACCTGGATCACCTTGGTCTCCCTTGGGACC +
Preference number: 6 (lower is better)
Translates to: PFRRTTRNAKSP*NTWITLVSLGT
Trigger: GGTCCCAAGGGAGACCAAGGTGATCCAGGTGTTCCAGGGGCTCTTGGCATTCCTAGTGGTCCTTCTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369733.8
CDS CAA 72 bp TGCAGTCCTTGTGCAAAAGGTCATCGCTCTGCACACTaGTGGTGCAGGCGGCGGAGGTGGAAACGCCAGTGT +
Preference number: 6 (lower is better)
Translates to: CSPCAKGHRSAH*WCRRRRWKRQC
Trigger: ACACTGGCGTTTCCACCTCCGCCGCCTGCACCACAAGTGTGCAGAGCGATGACCTTTTGCACAAGGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000650263.1
CDS TCA 72 bp CGGCAGTATGTAAGTAAGACGAGAGGTCCTCCACGCTaGTGCTGGACCACACATTGCCTGGGATCCCTGGTG +
Preference number: 6 (lower is better)
Translates to: RQYVSKTRGPPR*CWTTHCLGSLV
Trigger: CACCAGGGATCCCAGGCAATGTGTGGTCCAGCATCAGCGTGGAGGACCTCTCGTCTTACTTACATACTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648076.2
CDS GCA 72 bp GGCCTCGTGTGCTTCCAGTTGAGTTTATGTAGCCGCTaGTGCCATGAGTCAGGCTTTGTTTCTCCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: GLVCFQLSLCSR*CHESGFVSPAG
Trigger: GCCGGCTGGAGAAACAAAGCCTGACTCATGGCAGCAGCGGCTACATAAACTCAACTGGAAGCACACGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000483876.1
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS GCA 72 bp TGGGACAGGGTGGTCAAGCTGGGGGCCAGATTGTTCTaGATGCCAAACACTGAGGAGGATGTGCTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: WDRVVKLGARLF*MPNTEEDVLSP
Trigger: TGGACTCAGCACATCCTCCTCAGTGTTTGGCATGCAGAACAATCTGGCCCCCAGCTTGACCACCCTGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000650263.1
CDS CCA 72 bp CGTGAGTTTTCCTTTCAAAGGTTGAGCCTGGGGAGTTaGGCAGAGTGGAGGCAGGTGAGTGAGCCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: REFSFQRLSLGS*AEWRQVSEPSC
Trigger: ACAGGAGGGCTCACTCACCTGCCTCCACTCTGCCCAACTCCCCAGGCTCAACCTTTGAAAGGAAAACTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000483876.1
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS CCA 72 bp CACCACTGCTGCCGTAGCTGTGGATATCTGCAGTGGTaGTCTTGCCCTTTGTGGACACAGTCTTCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: HHCCRSCGYLQW*SCPLWTQSSGL
Trigger: GAGACCTGAAGACTGTGTCCACAAAGGGCAAGACCACCACTGCAGATATCCACAGCTACGGCAGCAGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000648076.2
ENST00000650263.1
CDS CCA 72 bp CACCACCACTGCTGCCGTAGCTGTGGATATCTGCAGTaGTGGTCTTGCCCTTTGTGGACACAGTCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: HHHCCRSCGYLQ*WSCPLWTQSSG
Trigger: ACCTGAAGACTGTGTCCACAAAGGGCAAGACCACCACTGCAGATATCCACAGCTACGGCAGCAGTGGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369733.8
ENST00000648076.2
ENST00000650263.1
CDS CCA 72 bp CCTGAGACTTTTCCCTTGGGGTCTGAGTTCTCCCTGTaGTTGAAGGCAGGTTCTGTGCAACCCTGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: PETFPLGSEFSL*LKAGSVQPCAS
Trigger: AGAGGCACAGGGTTGCACAGAACCTGCCTTCAACCACAGGGAGAACTCAGACCCCAAGGGAAAAGTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488320.1
ENST00000649118.1
CDS CCA 72 bp AAGTGGTGGTGGTGCCATGGGACAGGGTGGTCAAGCTaGGGGCCAGATTGTTCTGCATGCCAAACAGTCAAT +
Preference number: 6 (lower is better)
Translates to: KWWWCHGTGWSS*GPDCSACQTVN
Trigger: ATTGACTGTTTGGCATGCAGAACAATCTGGCCCCCAGCTTGACCACCCTGTCCCATGGCACCACCACCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488320.1
CDS CAA 72 bp CAGGGTGCAAAGTGGGTGAGCAGGACGCCATGTTGTTaGGAACTCCGAAGACTGATCCCGCAGAGTAGGCAT +
Preference number: 6 (lower is better)
Translates to: QGAKWVSRTPCC*ELRRLIPQSRH
Trigger: ATGCCTACTCTGCGGGATCAGTCTTCGGAGTTCCAAACAACATGGCGTCCTGCTCACCCACTTTGCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1
CDS CAA 72 bp GAGACTTTTCCCTTGGGGTCTGAGTTCTCCCTGTGGTaGAAGGCAGGTTCTGTGCAACCCTGTGCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: ETFPLGSEFSLW*KAGSVQPCASA
Trigger: AGCAGAGGCACAGGGTTGCACAGAACCTGCCTTCAACCACAGGGAGAACTCAGACCCCAAGGGAAAAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488320.1
ENST00000649118.1
CDS TCA 72 bp CCACTGGAGCTCCCTTCATACGCATGGCGGGTAACGTaGGTTTTCCTTTCAAAGGTTGAGCCTGGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: PLELPSYAWRVT*VFLSKVEPGEL
Trigger: CAACTCCCCAGGCTCAACCTTTGAAAGGAAAACTCACGTTACCCGCCATGCGTATGAAGGGAGCTCCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000483876.1
ENST00000648076.2
ENST00000649118.1
CDS TCA 72 bp GTCTCTTCCTGCTGTGGGCCGGCATCAAAAGCTTGTTaGCTGCGTAACTGTGCCGTTAAGGCTGCATGCTCT +
Preference number: 6 (lower is better)
Translates to: VSSCCGPASKAC*LRNCAVKAACS
Trigger: AGAGCATGCAGCCTTAACGGCACAGTTACGCAGTCAACAAGCTTTTGATGCCGGCCCACAGCAGGAAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647647.1
CDS TCA 72 bp GCCTGGAAAAGTCATCTCAAGATGGTGACACTGACCTaGGGAGGATGTGCTGAGTCCAGGGTGCAAAGTGGG +
Preference number: 6 (lower is better)
Translates to: AWKSHLKMVTLT*GGCAESRVQSG
Trigger: CCCACTTTGCACCCTGGACTCAGCACATCCTCCTCAGGTCAGTGTCACCATCTTGAGATGACTTTTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649118.1
CDS GCA 72 bp ATGCCAAACACTGAGGAGGATGTGCTGAGTCCAGGGTaGAAAGTGGGTGAGCAGGACGCCATGTTGTTTGGA +
Preference number: 6 (lower is better)
Translates to: MPNTEEDVLSPG*KVGEQDAMLFG
Trigger: TCCAAACAACATGGCGTCCTGCTCACCCACTTTGCACCCTGGACTCAGCACATCCTCCTCAGTGTTTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000650263.1
CDS CCA 72 bp GAGGTGGAAACGCCAGTGTTCACAGCCGCAGGACTCTaGGGCATGTTTTTCTTCACCCCATATGCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: EVETPVFTAAGL*GMFFFTPYAVE
Trigger: TTCCACAGCATATGGGGTGAAGAAAAACATGCCCCAGAGTCCTGCGGCTGTGAACACTGGCGTTTCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000650263.1
CDS CAA 90 bp TTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTCCTaGTGCAAAAGGTCATCGCTCTGCACACTTGTGGTGCAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LAGVLSFSRIRNLQS*CKRSSLCTLVVQAA
Trigger: CGCCGCCTGCACCACAAGTGTGCAGAGCGATGACCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000650263.1
CDS TCA 72 bp GAATGTCTTCAGAAGAGATGGAGGACGAGAACAAGCTaGCACCGTACCCCGAAGTCCGTAAGTAGCTCACAA +
Preference number: 6 (lower is better)
Translates to: ECLQKRWRTRTS*HRTPKSVSSSQ
Trigger: TTGTGAGCTACTTACGGACTTCGGGGTACGGTGTCAGCTTGTTCTCGTCCTCCATCTCTTCTGAAGACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369733.8
ENST00000648076.2
CDS CAA 90 bp ATCTCCTTCTTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTaGCAGTCCTTGTGCAAAAGGTCATCGCTCTGCACACTTGTGGTG +
Preference number: 6 (lower is better)
Translates to: ISFLAGVLSFSRIRN*QSLCKRSSLCTLVV
Trigger: CACCACAAGTGTGCAGAGCGATGACCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAAGAAGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000650263.1
CDS TCA 72 bp GTTGAAGAAGATGCTTCATACGCATGGCGGGTAACGTaGGTTTTCCTTTCAAAGGTTGAGCCTGGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: VEEDASYAWRVT*VFLSKVEPGEL
Trigger: CAACTCCCCAGGCTCAACCTTTGAAAGGAAAACTCACGTTACCCGCCATGCGTATGAAGCATCTTCTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650263.1
CDS CAA 72 bp GAATTTCACTCTCTCGTGTTTGACTCCGTCCTCTGGTaGAAGAAGATGCAAATTCCTTCCGAGGGTACTCCG +
Preference number: 6 (lower is better)
Translates to: EFHSLVFDSVLW*KKMQIPSEGTP
Trigger: CGGAGTACCCTCGGAAGGAATTTGCATCTTCTTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000649118.1
CDS CAA 72 bp GTGTTGTCTTTCTCTAGGATCAGGAACTTGCAGTCCTaGTGCAAAAGGTCATCGCTCTGCACACTTGTGGTG +
Preference number: 6 (lower is better)
Translates to: VLSFSRIRNLQS*CKRSSLCTLVV
Trigger: CACCACAAGTGTGCAGAGCGATGACCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGAGAAAGACAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000650263.1
CDS CAA 72 bp TTGGCAGGTGTGTTGTCTTTCTCTAGGATCAGGAACTaGCAGTCCTTGTGCAAAAGGTCATCGCTCTGCACA +
Preference number: 6 (lower is better)
Translates to: LAGVLSFSRIRN*QSLCKRSSLCT
Trigger: TGTGCAGAGCGATGACCTTTTGCACAAGGACTGCAAGTTCCTGATCCTAGAGAAAGACAACACACCTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000488320.1
ENST00000648076.2
ENST00000650263.1
CDS CCA 72 bp CTCGAATTTCACTCTCTCGTGTTTGACTCCGTCCTCTaGTTGAAGAAGATGCAAATTCCTTCCGAGGGTACT +
Preference number: 6 (lower is better)
Translates to: LEFHSLVFDSVL*LKKMQIPSEGT
Trigger: AGTACCCTCGGAAGGAATTTGCATCTTCTTCAACCAGAGGACGGAGTCAAACACGAGAGAGTGAAATTCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369733.8
ENST00000393211.3
ENST00000648076.2
ENST00000649118.1
CDS CCA 72 bp GCTGCAGTATGCATGGAAGAAAGGCCTTCATGCTCTTaGGTGAAGCATCCTAACACTTCTATGCAAATAGCC +
Preference number: 6 (lower is better)
Translates to: AAVCMEERPSCS*VKHPNTSMQIA
Trigger: GGCTATTTGCATAGAAGTGTTAGGATGCTTCACCCAAGAGCATGAAGGCCTTTCTTCCATGCATACTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649118.1
CDS TCA 72 bp AATCTACCCAGAAAACTCACTTCCAACTGCAGGAAATaGATCAGAGACAAGGTTCAATCCATGGCAATACCT +
Preference number: 6 (lower is better)
Translates to: NLPRKLTSNCRK*IRDKVQSMAIP
Trigger: AGGTATTGCCATGGATTGAACCTTGTCTCTGATTCATTTCCTGCAGTTGGAAGTGAGTTTTCTGGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480127.2
CDS TCA 72 bp AAGATGCATTTCTATAGTGCCACGAGCAAAGGCTTATaGCAGCAAGTTAATGTGGCTGATAGTCCCCTTAAT +
Preference number: 6 (lower is better)
Translates to: KMHFYSATSKGL*QQVNVADSPLN
Trigger: ATTAAGGGGACTATCAGCCACATTAACTTGCTGTCATAAGCCTTTGCTCGTGGCACTATAGAAATGCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483876.1
CDS CAA 72 bp CATACCATAGCCACCTGGTTTGAGGTTTTGAAGGAATaGGAAACAACTTTGAATAAATCCCCCTCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: HTIATWFEVLKE*ETTLNKSPSLF
Trigger: AAAGAGAGAGGGGGATTTATTCAAAGTTGTTTCCAATTCCTTCAAAACCTCAAACCAGGTGGCTATGGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000648076.2
ENST00000649118.1
ENST00000650263.1