RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL16A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000084636

Ensembl transcript IDs: ENST00000373667.4, ENST00000373668.7, ENST00000373672.8, ENST00000440437.1, ENST00000458715.5, ENST00000461217.1, ENST00000468459.5, ENST00000470799.5, ENST00000474000.5, ENST00000479100.1, ENST00000482478.5, ENST00000482910.1, ENST00000488128.6, ENST00000488897.5, ENST00000529928.1, ENST00000532877.1

Found 553 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTaGCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGG +
Preference number: 1 (lower is better)
Translates to: ALYQGKGFLSDPDCG*LTADATVHCLKQCW
Trigger: CCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
3UTR-3UTR GCA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTaGTGGGAGTGCAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: KGFLSDPDCGCLTADATVHCLKQ*WECRAW
Trigger: CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATG...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
3UTR CCA 72 bp GGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTaGCTGCAGCACCAGAGGAACCCACTGGAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: GTKREKEGNREL*LQHQRNPLEGK
Trigger: TTTCCCTTCCAGTGGGTTCCTCTGGTGCTGCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
3UTR GCA 72 bp CAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTaGCTGACAGCTGACGCAACAGTGCATTGCTTGAAA +
Preference number: 3 (lower is better)
Translates to: QGKGFLSDPDCG*LTADATVHCLK
Trigger: TTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGGGCCCCGCGGGGCCCTaGACTCCAGGCTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: TADATVHCLKQCWECRAWGPAGP*TPGSPD
Trigger: GTCAGGAGAGCCTGGAGTTCAGGGCCCCGCGGGGCC...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGCCGGCCGTCCCGGCCTaGCTTTCCCGGCACGCCCTT +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWEPAVPA*LSRHAL
Trigger: AAGGGCGTGCCGGGAAAGCCAGGCCGGGACGGCCGG...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGGCCTGGTGGGCCACCTaGATCCCCCGGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TADATVHCLKQCWECRAWAWWAT*IPRGPR
Trigger: CCTGGGACCCCGGGGGATCCAGGTGGCCCACCAGGC...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGACTCTTCGCGTGGGCTaGGTCACGGGGGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: TADATVHCLKQCWECRAWTLRVG*VTGAAP
Trigger: GGGGGCGGCCCCCGTGACCCAGCCCACGCGAAGAGT...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGGCCCCGCGGGGCCCTaGACTCCAGGCTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCGPAGP*TPGSPD
Trigger: GTCAGGAGAGCCTGGAGTTCAGGGCCCCGCGGGGCC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGCTCTCCCGGCTGTCTaGTGCCCGGCGCACGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCALPAV*CPAHAC
Trigger: GCAGGCGTGCGCCGGGCAGCAGACAGCCGGGAGAGC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGCTGGCCGCCCTGTGGTaGCCGGCGTTCCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWELAALW*PAFQGL
Trigger: GAGACCCTGGAACGCCGGGCACCACAGGGCGGCCAG...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGGCCGGCCACTCCGGGTaGGGGAAGAGAGGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: TADATVHCLKQCWECRAWAGHSG*GKRGGS
Trigger: GGAACCGCCTCTCTTCCCCCACCCGGAGTGGCCGGC...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGGTCCTGGCCGCCCTGTaGTGCCCGGCGTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWEVLAAL*CPAFQG
Trigger: ACCCTGGAACGCCGGGCACCACAGGGCGGCCAGGAC...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCGCTCTCCCGGCTGTCTaGTGCCCGGCGCACGCCTGC +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTALPAV*CPAHAC
Trigger: GCAGGCGTGCGCCGGGCAGCAGACAGCCGGGAGAGC...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTGGCCGCCCTGTGGTaGCCGGCGTTCCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLAALW*PAFQGL
Trigger: GAGACCCTGGAACGCCGGGCACCACAGGGCGGCCAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGCCTTTGGGGCCGGGCTaGCCAGGCCGTCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVPLGPG*PGRPAM
Trigger: CATGGCAGGACGGCCTGGGCAGCCCGGCCCCAAAGG...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAACGCCTTCGGGGCCCTaGTCTCCTTTGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRTPSGP*SPLGPG
Trigger: GCCCGGCCCCAAAGGAGAGCAGGGCCCCGAAGGCGT...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCCTGCGGGCCCGGCTaGCAGGAGCTGCCCATCCAA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPCGPG*QELPIQ
Trigger: TTGGATGGGCAGCTCCTGGCAGCCGGGCCCGCAGGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCGGGGGCCCAGGGATaGCAGGGATGCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPGAQG*QGCLAG
Trigger: GCCAGCAAGGCATCCCTGGCATCCCTGGGCCCCCGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGTCCCTTGGAGCCTGGTaGACCAGGCAGGCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: TADATVHCLKQCWECRAWSLGAW*TRQAPL
Trigger: GAGCGGGGCCTGCCTGGTCCACCAGGCTCCAAGGGA...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGCTCTCCCTTGGAGCCTaGTGGACCAGGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWELSLGA*WTRQAP
Trigger: CGGGGCCTGCCTGGTCCACCAGGCTCCAAGGGAGAG...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGGTCCCCAGCTTCCTaGCGCTCGAGCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVGSPAS*RSSSPG
Trigger: GCCGGGAGAGCTCGAGCGCCAGGAAGCTGGGGACCC...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGGGTCCCCAGCTTCCTaGCGCTCGAGCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCGSPAS*RSSSPG
Trigger: GCCGGGAGAGCTCGAGCGCCAGGAAGCTGGGGACCC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp GCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTCGCCATCCTGGCCCTaGGCCCTGAGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGLCTRVRDFYLTQIVGASPSWP*ALSSRL
Trigger: GAGCCTGGAGCTCAGGGCCCAGGGCCAGGATGGCGA...GGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGCCCACAGGCCTCATaGGTCGTCGGGGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVGPQAS*VVGAPE
Trigger: CTCTGGGGCCCCGACGACCCATGAGGCCTGTGGGCC...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGGCTCCAGGCTCCCCCTaGGGTCCCTGGACTCCCCTT +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWEAPGSP*GPWTPL
Trigger: AAGGGGAGTCCAGGGACCCCAGGGGGAGCCTGGAGC...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGTCCAGTGGGGCCAGGTaGTCCCCGAGGTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: TADATVHCLKQCWECRAWSSGAR*SPRSRK
Trigger: CTTCCGGGACCTCGGGGACCACCTGGCCCCACTGGA...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGATGCCAGGCAGTCCTaGGGGGCCCGTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCDARQS*GARGTW
Trigger: CCAGGTGCCACGGGCCCCCCAGGACTGCCTGGCATC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGGGTCCCGGAAGTCCCTaGATGCCAGGCAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWEGPGSP*MPGKPG
Trigger: CCCGGGTTTGCCTGGCATTCAGGGACTTCCGGGACC...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGTGGCCTCTCTCTCCTaGAGGGCCCGGTGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCVASLS*RARWPN
Trigger: GTTGGGCCACCGGGCCCTGCAGGAGAGAGAGGCCAC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGATGGCCCCACTGGTCCTaGTGGCCCTGGACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRWPHWS*WPWTAS
Trigger: GCTGGCAGTCCAGGGCCACCAGGACCAGTGGGGCCA...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTCCGGGAATACCTGGTaGACCCTGCGGGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSGNTW*TLRARL
Trigger: CAGCCGGGCCCGCAGGGTCCACCAGGTATTCCCGGA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTGGTCCGGGAATACCTaGTGGACCCTGCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCWSGNT*WTLRAR
Trigger: CCGGGCCCGCAGGGTCCACCAGGTATTCCCGGACCA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCGTACCAGGTTCGCCTaGGGGGCCAGGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCRTRFA*GARVSR
Trigger: CCTGGACACCCTGGCCCCCCAGGCGAACCTGGTACG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACACAGAGGCGGCTAGACTaGGGGGTGCACAGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTQRRLD*GVHSPA
Trigger: GGCGGGGCTGTGCACCCCGCAGTCTAGCCGCCTCTG...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp GGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCTCAGTGGGCCCTCCTTaGCACCCTGGGAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GRALYQGKGFLSDPDCGCSVGPP*HPGRQV
Trigger: TACCTGCCTCCCAGGGTGGCAAGGAGGGCCCACTGA...GCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTGGAGCACCTGGCCTaGCCGGAGCACCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLEHLA*PEHHPS
Trigger: GGAAGGATGGTGCTCCGGGCAGGCCAGGTGCTCCAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp ATGAGTGTTGAATGCTACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGACACAGATCTCTCCTaGCCGGCCGTCCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MSVECYSKTVGRALYQGKDTDLS*PAVPAW
Trigger: CCAGGCCGGGACGGCCGGCCAGGAGAGATCTGTGTC...CTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGTAGCATTCAACACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATGCGGTTCCAGGGGGCTaGGGGCCTGCCAGGGACACT +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHAVPGG*GPARDT
Trigger: AGTGTCCCTGGCAGGCCCCCAGCCCCCTGGAACCGC...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGCCCCTTCTCTCCGGATaGGCCAGGCAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVPLLSG*ARQGHH
Trigger: GTGGTGGCCTTGCCTGGCCCATCCGGAGAGAAGGGG...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCACGAGGTACCCTGGGTaGGCCCTCTGCCCCTGGACA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCTRYPG*ALCPWT
Trigger: TGTCCAGGGGCAGAGGGCCCACCCAGGGTACCTCGT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGGCACCTGGGTAACCTaGTTGCCCTGGAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCGTWVT*LPWRTR
Trigger: CCGGGTCCTCCAGGGCAACCAGGTTACCCAGGTGCC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp ATGAGTGTTGAATGCTACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGTTCCCGGCACGCCCTTaGTGCCTCCGTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: MSVECYSKTVGRALYQGKFPARP*CLRRPS
Trigger: AGAAGGGCGACGGAGGCATCAAGGGCGTGCCGGGAA...CTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGTAGCATTCAACACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp GGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCGCCCTTTGGGCCCAATaGCACAGATCTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRALYQGKGFLSDPDCGCALWAQ*HRSLLA
Trigger: GGCCAGGAGAGATCTGTGTCATTGGGCCCAAAGGGC...GCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGAGTCCTGGGGGCCCTTaGACTCCTGGTAGACCGGGT +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVSPGGP*TPGRPG
Trigger: ACCCGGTCTACCAGGAGTTCAAGGGCCCCCAGGACT...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTCCTTTCTCTCCCGCTaGCCCGGTGTAGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSFLSR*PGVATL
Trigger: GAGCGTGGCTACACCGGGTCAGCGGGAGAGAAAGGA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGACCCCTACAACCGAGCTaGAGGACAAGCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRPLQPS*RTSRAP
Trigger: GGGAGCCCTGCTTGTCCTGCAGCTCGGTTGTAGGGG...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp GCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCGAGCTGCAGTCCACGTaGACAGAGGCCACACGTCCA +
Preference number: 4 (lower is better)
Translates to: AGLCTRVRDFYLTQIVGAELQST*TEATRP
Trigger: TGGACGTGTGGCCTCTGTGCACGTGGACTGCAGCTC...GGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGACCGGAAGTCCCTGAATaGCAGGCAAACCCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRPEVPE*QANPGL
Trigger: GAGCCCCGGGTTTGCCTGGCATTCAGGGACTTCCGG...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTCCCGTCTGTCCTTGCTaGCCATCACGGCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAPVCPC*PSRPGG
Trigger: GCCTCCGGGCCGTGATGGGCAGCAAGGACAGACGGG...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCAGTCCCGTCTGTCCTTaGTGCCCATCACGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSPVCP*CPSRPG
Trigger: TCCGGGCCGTGATGGGCAGCAAGGACAGACGGGACT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTGGTCGTCCCGGAGCTaGCGCCATCTCCATGGGGAA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCWSSRS*RHLHGE
Trigger: TTCCCCATGGAGATGGCGGCAGCTCCGGGACGACCA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGCTGTCCCGGGCACCATaGACACAGGGCGGACACTCA +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVLSRAP*TQGGHS
Trigger: TGAGTGTCCGCCCTGTGTCCATGGTGCCCGGGACAG...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGCTCCACTGGCCCCTGTaGAGGACACAAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: TADATVHCLKQCWECRAWLHWPL*RTQDAG
Trigger: CCCAGCATCTTGTGTCCTCCACAGGGGCCAGTGGAG...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGACAAAGTCGCCATCCTaGCCCTGGGCCCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVTKSPS*PWALSS
Trigger: GGAGCTCAGGGCCCAGGGCCAGGATGGCGACTTTGT...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCCCATCCTGAAGGTTaGACAGGGCTGGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPHPEG*TGLGTA
Trigger: AGCCGTGCCCAGCCCTGTCCAACCTTCAGGATGGGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp GCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGGCAAGCCAAAGCCTaGAGGCCCAGGTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: AGLCTRVRDFYLTQIVGAWQAKA*RPRFPL
Trigger: AAGGGGGAACCTGGGCCTCCAGGCTTTGGCTTGCCA...GGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGACCCCTGGAGATCCCTaGGCACCCTTCTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWETPGDP*APFSPV
Trigger: CACTGGAGAGAAGGGTGCCCAGGGATCTCCAGGGGT...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGCAGGAGCACTCCCCTaGCTCACCCTTCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCAGALP*LTLLSS
Trigger: CGAGGAGAGAAGGGTGAGCCAGGGGAGTGCTCCTGC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGGGGAGCAGCATCCTTaGGGTCCAGCCGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAGEQHP*GPAGSS
Trigger: GCTGCTCCCGGCTGGACCCCAAGGATGCTGCTCCCC...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCCCTTAAAGCCCGGTaGTCCCATGAGTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPLKAR*SHESRG
Trigger: CCCCCTGGACTCATGGGACCACCGGGCTTTAAGGGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGCCCTTTGGGCCCAATaGCACAGATCTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCALWAQ*HRSLLA
Trigger: GGCCAGGAGAGATCTGTGTCATTGGGCCCAAAGGGC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCAGAGGGAGCAAGTGTaGCATTGCTGTCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCQREQV*HCCPGH
Trigger: GTGCCCGGGACAGCAATGTCACACTTGCTCCCTCTG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGAAGATGAGGTCTCCTTaGGAGGGGCAGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWEKMRSP*EGQEHS
Trigger: GGAGTGCTCCTGCCCCTCTCAAGGAGACCTCATCTT...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGAGGCGGGACCCTACGTaGCCAGAGCTGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KGFLSDPDCGCLTADATVRRDPT*PELPWK
Trigger: CTTCCAGGGCAGCTCTGGGCACGTAGGGTCCCGCCT...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGAGCTGCAGTCCACGTaGACAGAGGCCACACGTCCA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCELQST*TEATRP
Trigger: TGGACGTGTGGCCTCTGTGCACGTGGACTGCAGCTC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCGGGAGGAGGCTGAGCTaGAGTCCACGTGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTGRRLS*SPRAQR
Trigger: CCTCTGTGCACGTGGACTGCAGCTCAGCCTCCTCCC...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCACTGCCAGCTGGCCCTaGCTCCCCGAAGTTACCCTT +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCTASWP*LPEVTL
Trigger: AAGGGTAACTTCGGGGAGGCAGGGCCAGCTGGCAGT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCGCCCCTTTGATGCCTaGTGGCCCCACTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KGFLSDPDCGCLTADATVRPFDA*WPHWSW
Trigger: CCAGGACCAGTGGGGCCAGCAGGCATCAAAGGGGCG...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGCACGCTCTCCAGCCTTaGCCTGTTTTCCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWEHALQP*PVFLAS
Trigger: GCTTGCCAGGAAAACAGGGCAAGGCTGGAGAGCGTG...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp GGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCCAGCATCACCCTTCTaGCCCTTCAGTCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: GRALYQGKGFLSDPDCGCPASPF*PFSPRS
Trigger: AGAGCGTGGACTGAAGGGGCAGAAGGGTGATGCTGG...GCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGGCTGGGGCAGGCAGTaGAGCCATCACCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCGWGRQ*SHHPFL
Trigger: GAGAAAAGGGTGATGGCTGCACTGCCTGCCCCAGCC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCAGTCCCGTCTGTCCTTaGTGCCCATCACGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTSPVCP*CPSRPG
Trigger: TCCGGGCCGTGATGGGCAGCAAGGACAGACGGGACT...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGCTCCCTTCTCTCCCTTaGAGCCTGGTGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVLPSLP*SLVDQA
Trigger: TGCCTGGTCCACCAGGCTCCAAGGGAGAGAAGGGAG...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCGGCCGTCCCGGCCTaGCTTTCCCGGCACGCCCTT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPAVPA*LSRHAL
Trigger: AAGGGCGTGCCGGGAAAGCCAGGCCGGGACGGCCGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGCCTGGTGGGCCACCTaGATCCCCCGGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHAWWAT*IPRGPR
Trigger: CCTGGGACCCCGGGGGATCCAGGTGGCCCACCAGGC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGCTCTCCCTTCACACCTaGCTTCCCAGGTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWELSLHT*LPRFPT
Trigger: GGTGGGAAACCTGGGAAGCCAGGTGTGAAGGGAGAG...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCAGGGTCTCCCCTGGCTaGTACAGGATCACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCRVSPG*YRITRL
Trigger: GAGCCTGGTGATCCTGTACCAGCCAGGGGAGACCCT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTGCCAGGGTCTCCCCTaGCTGGTACAGGATCACCAG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCCQGLP*LVQDHQ
Trigger: CTGGTGATCCTGTACCAGCCAGGGGAGACCCTGGCA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTCCACTGGCCCCTGTaGAGGACACAAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLHWPL*RTQDAG
Trigger: CCCAGCATCTTGTGTCCTCCACAGGGGCCAGTGGAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp ATGAGTGTTGAATGCTACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGCTAATGGAACACAGCTaGACCGGCCCGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: MSVECYSKTVGRALYQGKLMEHS*TGPPGR
Trigger: CCTCCCTGGCGGGCCGGTCCAGCTGTGTTCCATTAG...CTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGTAGCATTCAACACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATGGAATACTCTTCGCGTaGGCTGGGTCACGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHGILFA*AGSRGP
Trigger: CGGCCCCCGTGACCCAGCCCACGCGAAGAGTATTCC...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCATGAGCTCATTGCTCTaGGTGTCCCGGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCMSSLL*VSRRAL
Trigger: CAAGGCCCGCCGGGACACCCAGAGCAATGAGCTCAT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCACCTTTCCCTCCCTTaGGGCCAGAGGGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCHLSLP*GQREQV
Trigger: CACTTGCTCCCTCTGGCCCCAAGGGAGGGAAAGGTG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACACACCCTTCTCTCCAGTaGGGCCAGGTGGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTHPSLQ*GQVVPE
Trigger: CTCGGGGACCACCTGGCCCCACTGGAGAGAAGGGTG...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGGCTCCTTTCACCCCTaGAGATCCCTGGGCACCCTT +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRGSFHP*RSLGTL
Trigger: AAGGGTGCCCAGGGATCTCCAGGGGTGAAAGGAGCC...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGGCTCCTTTCACCCCTaGAGATCCCTGGGCACCCTT +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCGSFHP*RSLGTL
Trigger: AAGGGTGCCCAGGGATCTCCAGGGGTGAAAGGAGCC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCGTCCCACAGGTCCGGTaGCTCCTTTCACCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTVPQVR*LLSPLE
Trigger: CTCCAGGGGTGAAAGGAGCCACCGGACCTGTGGGAC...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGGCCTAGAGGCTCAGTaGGCCCTCCTTGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAGLEAQ*ALLATL
Trigger: CAGGGTGGCAAGGAGGGCCCACTGAGCCTCTAGGCC...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCTGGGAGTGCAGAGCCTaGCCTAGAGGCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTWECRA*PRGSVG
Trigger: GCCCACTGAGCCTCTAGGCCAGGCTCTGCACTCCCA...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGCCTGGAGGCCCTGGTaGCCCAACGTGTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHAWRPW*PNVSRG
Trigger: CCCCCGGGACACGTTGGGCCACCAGGGCCTCCAGGC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTGTCCTGCAGCTCCTaGATCACCCTTGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLSCSS*ITLGTR
Trigger: CCTGGTCCCAAGGGTGATCCAGGAGCTGCAGGACAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTGCCGCCATCTCCATaGGGAACTGCATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLPPSP*GTASWR
Trigger: CCTCCAGGATGCAGTTCCCCATGGAGATGGCGGCAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCAGGACCTTGAGGACCTaGGGGGCCGGGAAGACCATT +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCRTLRT*GAGKTI
Trigger: AATGGTCTTCCCGGCCCCCCAGGTCCTCAAGGTCCT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCAGCCTTGCCTGGCTaGCCCATGGGACCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPALPG*PMGPGG
Trigger: GCCCCCGGGTCCCATGGGCCAGCCAGGCAAGGCTGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTCCACCTCGCTGTTTTaGGGCTCCTCCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSTSLF*GSSRQK
Trigger: CTTCTGCCTGGAGGAGCCTCAAAACAGCGAGGTGGA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp CAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCACAGAGGGAGCAAGTGTaGCATTGCTGTCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: QGKGFLSDPDCGCLTADAQREQV*HCCPGH
Trigger: GTGCCCGGGACAGCAATGTCACACTTGCTCCCTCTG...TGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCGGACATCCCCATCCTaGAGGTTGGACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KGFLSDPDCGCLTADATVRTSPS*RLDRAG
Trigger: CCCAGCCCTGTCCAACCTTCAGGATGGGGATGTCCG...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATAACTCCAGGCTCTCCTaGCAGTCCTGGCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHNSRLS*QSWPPC
Trigger: ACAGGGCGGCCAGGACTGTCAGGAGAGCCTGGAGTT...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCAGCCATCCTGACCCATaGGCTCTGCCACCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTSHPDP*ALPPKL
Trigger: GAGCTTGGGTGGCAGAGCTCATGGGTCAGGATGGCT...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp GCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGGGTGCCTGACAGCTaGCGCAACAGTGCATTGCTT +
Preference number: 4 (lower is better)
Translates to: AGLCTRVRDFYLTQIVGAWVPDS*RNSALL
Trigger: AAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCA...GGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTCTTGGGCGCTCCAGTaGCAAAAAGCACTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSWALQ*QKALGA
Trigger: TGCGCCCAGTGCTTTTTGTCACTGGAGCGCCCAAGA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp GCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCACAGTCATTGCCCCGTaGTCCCTTCTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: AGLCTRVRDFYLTQIVGATVIAP*SLLSLG
Trigger: TCCAAGGGAGAGAAGGGAGCACGGGGCAATGACTGT...GGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGTCCCTTCGGGCCTTCTaGACACTGAAGTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVSLRAF*TLKWGI
Trigger: GATGCCCCACTTCAGTGTGCAGAAGGCCCGAAGGGA...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCAGGGTCTCCCTTCTaGCCTTTGGGCCCAATGACA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPGSPF*PLGPMT
Trigger: TGTCATTGGGCCCAAAGGGCAGAAGGGAGACCCTGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGGAGACAGGCTTGCCCTaGTCAGCATCCAAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: TADATVHCLKQCWECRAWETGLP*SASKPR
Trigger: TCTAGGCTTGGATGCTGAGCAGGGCAAGCCTGTCTC...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCACTGCCAGCTGGCCCTaGCTCCCCGAAGTTACCCTT +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTTASWP*LPEVTL
Trigger: AAGGGTAACTTCGGGGAGGCAGGGCCAGCTGGCAGT...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAGGCTGGGGCAGGCAGTaGAGCCATCACCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: QGKGFLSDPDCGCLTADAGWGRQ*SHHPFL
Trigger: GAGAAAAGGGTGATGGCTGCACTGCCTGCCCCAGCC...TGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATCTGCCCAGGCCGTCCTaGCATGTCTGTCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHLPRPS*HVCHCP
Trigger: GGGACAGTGACAGACATGGCAGGACGGCCTGGGCAG...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCTTTGGGGCCGGGCTaGCCAGGCCGTCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPLGPG*PGRPAM
Trigger: CATGGCAGGACGGCCTGGGCAGCCCGGCCCCAAAGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATACGCCTTCGGGGCCCTaGTCTCCTTTGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHTPSGP*SPLGPG
Trigger: GCCCGGCCCCAAAGGAGAGCAGGGCCCCGAAGGCGT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTGGCCCTTCTGTCCTaGAGCTCCTGGATCACCCTT +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLALLS*SSWITL
Trigger: AAGGGTGATCCAGGAGCTGCAGGACAGAAGGGCCAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCCTTCTCGCCTTTCTaGCCCTTCTCGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPFSPF*PFSPVE
Trigger: CTCAACAGGCGAGAAGGGCCAGAAAGGCGAGAAGGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTCTCCCTTCACACCTaGCTTCCCAGGTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLSLHT*LPRFPT
Trigger: GGTGGGAAACCTGGGAAGCCAGGTGTGAAGGGAGAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCCTTCAGGCAGTGTTaGGCACACTTCACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPFRQC*AHFTGV
Trigger: GACCCCTGTGAAGTGTGCCCAACACTGCCTGAAGGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCATGCCAGGGTCTCCCCTaGCTGGTACAGGATCACCAG +
Preference number: 4 (lower is better)
Translates to: QGKGFLSDPDCGCLTADACQGLP*LVQDHQ
Trigger: CTGGTGATCCTGTACCAGCCAGGGGAGACCCTGGCA...TGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGAGGACACAAGATGCTaGGCCCCTACAACCGAGCTG +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVEDTRC*APTTEL
Trigger: CAGCTCGGTTGTAGGGGCCCAGCATCTTGTGTCCTC...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCAACCCACATCTCCACTaGCCCCTGTGGAGGACACAA +
Preference number: 4 (lower is better)
Translates to: GRALYQGKGFLSDPDCGCNPHLH*PLWRTQ
Trigger: TTGTGTCCTCCACAGGGGCCAGTGGAGATGTGGGTT...GCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGGCCCACAGGCCTCATaGGTCGTCGGGGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHGPQAS*VVGAPE
Trigger: CTCTGGGGCCCCGACGACCCATGAGGCCTGTGGGCC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp ATGAGTGTTGAATGCTACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGATGAGCTCATTGCTCTaGGTGTCCCGGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MSVECYSKTVGRALYQGKMSSLL*VSRRAL
Trigger: CAAGGCCCGCCGGGACACCCAGAGCAATGAGCTCAT...CTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGTAGCATTCAACACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCACACCTTTCCCTCCCTTaGGGCCAGAGGGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: QGKGFLSDPDCGCLTADAHLSLP*GQREQV
Trigger: CACTTGCTCCCTCTGGCCCCAAGGGAGGGAAAGGTG...TGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAAAGGTTGGACAGGGCTaGGCACGGCTCACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTKVGQG*ARLTGL
Trigger: GAGCCCTGTGAGCCGTGCCCAGCCCTGTCCAACCTT...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACACCCCATCCTGAAGGTTaGACAGGGCTGGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTPHPEG*TGLGTA
Trigger: AGCCGTGCCCAGCCCTGTCCAACCTTCAGGATGGGG...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGTCCTGGCCGCCCTGTaGTGCCCGGCGTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHVLAAL*CPAFQG
Trigger: ACCCTGGAACGCCGGGCACCACAGGGCGGCCAGGAC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTCACGCCCTTCAGTCCTaGGGGCCCTTGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAHALQS*GPLNSW
Trigger: CCAGGAGTTCAAGGGCCCCCAGGACTGAAGGGCGTG...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCAGGAGCACTCCCCTaGCTCACCCTTCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTAGALP*LTLLSS
Trigger: CGAGGAGAGAAGGGTGAGCCAGGGGAGTGCTCCTGC...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCTGGTCCGGGAATACCTaGTGGACCCGGCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTWSGNT*WTRHAR
Trigger: TCTGGCATGCCGGGTCCACCAGGTATTCCCGGACCA...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGTCCTCGCTCTCCTCTaGGACCCGCTGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHVLALL*DPLGLG
Trigger: CCCCAGGCCCAGCGGGTCCCAGAGGAGAGCGAGGAC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTCACCGGAGTTACCTTaGGGTCCTCGCTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSPELP*GPRSPL
Trigger: CAGAGGAGAGCGAGGACCCCAAGGTAACTCCGGTGA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTTCCCTGGAGGCCCTaGTCGTCCCGGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLPWRP*SSRSCR
Trigger: GCGGCAGCTCCGGGACGACCAGGGCCTCCAGGGAAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCAGGGATGCCTTGCTaGCCCATTGGTCCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPGMPC*PIGPVA
Trigger: TGCAACAGGACCAATGGGCCAGCAAGGCATCCCTGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTTTCTCTATCTCTCCGTaGCGGTCACGGGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAFSISP*RSRVPS
Trigger: GCTGGGGACCCGTGACCGTCACGGAGAGATAGAGAA...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGACGGACACTCATCGGCTaGTGTCTCCTGATGGACCTT +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRRTLIG*CLLMDL
Trigger: AAGGTCCATCAGGAGACAGCAGCCGATGAGTGTCCG...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCTGGAAGGGGGCTCCTaGGGGCCCTTTAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: KGFLSDPDCGCLTADATVLEGGS*GPFKSQ
Trigger: CTGACTCTTAAAGGGCCCGCAGGAGCCCCCTTCCAG...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGACAAACGAGACAGGCTTaGCCTGCTCAGCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRQTRQA*PAQHPS
Trigger: GCTTGGATGCTGAGCAGGGCAAGCCTGTCTCGTTTG...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCAAACGAGACAGGCTTaGCCTGCTCAGCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCQTRQA*PAQHPS
Trigger: GCTTGGATGCTGAGCAGGGCAAGCCTGTCTCGTTTG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCCGTCTGTCCTTGCTaGCCATCACGGCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPVCPC*PSRPGG
Trigger: GCCTCCGGGCCGTGATGGGCAGCAAGGACAGACGGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGCATTGCTTGAAACAGTaGTGGGAGTGCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWEHCLKQ*WECRAW
Trigger: CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATG...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCGGGGAGCCCCTCATaGCAGGCGGACCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPGSPS*QADPLL
Trigger: GAGAAGAGGGTCCGCCTGGCATGAGGGGCTCCCCGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCAGGTGATCCAACTTTaGCTGGGAATCCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCQVIQL*LGIQGD
Trigger: GTCCCCCTGGATTCCCAGGCAAAGTTGGATCACCTG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTCCTTTCAGACCCACTaGAGAGATCCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSFQTH*RDPSWS
Trigger: GGACCAGCTGGGATCTCTGCAGTGGGTCTGAAAGGA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCCCTTTCTGCCTTCTaGCTGATTCTTCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPLSAF*LILPVS
Trigger: GCTGACGGGAAGAATCAGCCAGAAGGCAGAAAGGGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTCTCCCTTGGAGCCTaGTGGACCAGGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLSLGA*WTRQAP
Trigger: CGGGGCCTGCCTGGTCCACCAGGCTCCAAGGGAGAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGACACAGATCTCTCCTaGCCGGCCGTCCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHDTDLS*PAVPAW
Trigger: CCAGGCCGGGACGGCCGGCCAGGAGAGATCTGTGTC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCACCCTTCAGGCAGTGTTaGGCACACTTCACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: QGKGFLSDPDCGCLTADAPFRQC*AHFTGV
Trigger: GACCCCTGTGAAGTGTGCCCAACACTGCCTGAAGGG...TGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTAGGGTCTCCCCTGGCTaGTACAGGATCACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTARVSPG*YRITRL
Trigger: GAGCCTGGTGATCCTGTACCAGCCAGGGGAGACCCT...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGATGAGGCTGAGTCGGTaGATGAGGTTGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: TADATVHCLKQCWECRAWMRLSR*MRLKPV
Trigger: GACTGGCTTCAACCTCATCCACCGACTCAGCCTCAT...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCGAAGAGCTGGGGCACTaGGAAGATGCAGGACACAAA +
Preference number: 4 (lower is better)
Translates to: GRALYQGKGFLSDPDCGCEELGH*EDAGHK
Trigger: TTTGTGTCCTGCATCTTCCCAGTGCCCCAGCTCTTC...GCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCCAGTGGGGCCAGGTaGTCCCCGAGGTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSSGAR*SPRSRK
Trigger: CTTCCGGGACCTCGGGGACCACCTGGCCCCACTGGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGATGCTTGAAACAGTGCTaGGAGTGCAGAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRCLKQC*ECRAWP
Trigger: AGGCCAGGCTCTGCACTCCCAGCACTGTTTCAAGCA...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGATCCCAGCTGGTCCTaGCTGGCCTGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHDPSWS*LAWRPW
Trigger: CCAGGGCCTCCAGGCCAGCCAGGACCAGCTGGGATC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCCTGCAGGGCCCGGTaGCCCAACAGGCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSCRAR*PNRPHG
Trigger: TCCATGGGGCCTGTTGGGCCACCGGGCCCTGCAGGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATTCCACCTCGCTGTTTTaGGGCTCCTCCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHSTSLF*GSSRQK
Trigger: CTTCTGCCTGGAGGAGCCTCAAAACAGCGAGGTGGA...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATTCGGCTGCTGTCTCCTaGTGGACCTTTGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHSAAVS*WTFAPL
Trigger: AAGGGGAGCAAAGGTCCATCAGGAGACAGCAGCCGA...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTTCCCGGCACGCCCTTaGTGCCTCCGTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHFPARP*CLRRPS
Trigger: AGAAGGGCGACGGAGGCATCAAGGGCGTGCCGGGAA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGGTCCCGGAAGTCCCTaGATGCCAGGCAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHGPGSP*MPGKPG
Trigger: CCCGGGTTTGCCTGGCATTCAGGGACTTCCGGGACC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATCAGATTGTGGGTGCCTaGCAGCTGACGCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHQIVGA*QLTQQC
Trigger: GCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTG...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTGCCCTTCTCTGCTTaGGGGCCAGGTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLPFSA*GPGGPG
Trigger: ACCTGGCCCACCTGGCCCTCAAGCAGAGAAGGGCAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGCTCCTGATGGACCTTTaGTCCCCTTTCTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVLLMDL*SPFCLL
Trigger: CAGAAGGCAGAAAGGGGAGCAAAGGTCCATCAGGAG...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATCCAGGGTCTCCCTTCTaGCCTTTGGGCCCAATGACA +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHPGSPF*PLGPMT
Trigger: TGTCATTGGGCCCAAAGGGCAGAAGGGAGACCCTGG...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGTGGAGGACACAAGATaGTGGGCCCCTACAACCGAG +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAVEDTR*WAPTTE
Trigger: CTCGGTTGTAGGGGCCCAGCATCTTGTGTCCTCCAC...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGTTGTGCACCTGTATTTaGCCCATGGCCGAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVLCTCI*PMAEGS
Trigger: GCTACCTTCGGCCATGGGGCAAATACAGGTGCACAA...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCGCCCCTTTGATGCCTaGTGGCCCCACTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHRPFDA*WPHWSW
Trigger: CCAGGACCAGTGGGGCCAGCAGGCATCAAAGGGGCG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp GGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCGACGCAACAGTGCATTaGTTGAAACAGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRALYQGKGFLSDPDCGCDATVH*LKQCWE
Trigger: CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTC...GCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATACCAGGTTCACCCTCTaGGCCAGGCCGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHTRFTL*ARPASA
Trigger: AGCACTGGCCGGCCTGGCGCAGAGGGTGAACCTGGT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp ATGAGTGTTGAATGCTACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGTTCTGCACACTGAAGTaGGGCATCCGGGGAGATTCG +
Preference number: 4 (lower is better)
Translates to: MSVECYSKTVGRALYQGKFCTLK*GIRGDS
Trigger: CGAATCTCCCCGGATGCCCCACTTCAGTGTGCAGAA...CTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGTAGCATTCAACACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTCCCTTCTCGCCTTTCTaGCCCTTCTCGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAPFSPF*PFSPVE
Trigger: CTCAACAGGCGAGAAGGGCCAGAAAGGCGAGAAGGG...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTCTCCCCTTTGGGCCCTaGCTTTCCAGGAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTALPFGP*LSRKSN
Trigger: GTTGGACTTCCTGGAAAGCCAGGGCCCAAAGGGGAG...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACTCTTCGCGTGGGCTaGGTCACGGGGGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPTLRVG*VTGAAP
Trigger: GGGGGCGGCCCCCGTGACCCAGCCCACGCGAAGAGT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGGAATACTCTTCGCGTaGGCTGGGTCACGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHGILFA*AGSRGP
Trigger: CGGCCCCCGTGACCCAGCCCACGCGAAGAGTATTCC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGAAGAGCTGGGGCACTaGGAAGATGCAGGACACAAA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCEELGH*EDAGHK
Trigger: TTTGTGTCCTGCATCTTCCCAGTGCCCCAGCTCTTC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATCGCAAGTCGAAGAGCTaGGGCACTGGGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHRKSKS*GTGKMQ
Trigger: CTGCATCTTCCCAGTGCCCCAGCTCTTCGACTTGCG...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGAAGCCTAGAAATACATaGCCCACAGGCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: CGCLTADATVHCLKQCWEKPRNT*PTGLMG
Trigger: ACCCATGAGGCCTGTGGGCCATGTATTTCTAGGCTT...CTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGGTCCTTTTTCACCTaGTGTTCCTCTGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: AGLCTRVRDFYLTQIVGAWSFFT*CSSESR
Trigger: ACGGGACTCAGAGGAACACCAGGTGAAAAAGGACCA...GGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTTCCGGGAATACCTGGTaGACCCGGCATGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTASGNTW*TRHARE
Trigger: TTCTCTGGCATGCCGGGTCCACCAGGTATTCCCGGA...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTACTCCAAAACAGTaGGCCGGGCTCTGTACCAGG +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTATPKQ*AGLCTR
Trigger: CCTGGTACAGAGCCCGGCCCACTGTTTTGGAGTAGC...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTTTTCTGCCTTCTGGCTaGTTCTTCCCGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAFLPSG*FFPSAG
Trigger: CCCAGCTGACGGGAAGAATCAGCCAGAAGGCAGAAA...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATAACTCCAGGCTCTCCTaGCAGTCCTGGCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHNSRLS*QSWPPC
Trigger: ACAGGGCGGCCAGGACTGTCAGGAGAGCCTGGAGTT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATAGTCCTGGGGGCCCTTaGACTCCTGGTAGACCGGGT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSPGGP*TPGRPG
Trigger: ACCCGGTCTACCAGGAGTTCAAGGGCCCCCAGGACT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCCCTACAACCGAGCTaGAGGACAAGCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPLQPS*RTSRAP
Trigger: GGGAGCCCTGCTTGTCCTGCAGCTCGGTTGTAGGGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTCTGACCCATGAGCTCTaGCACCCAAGCTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTALTHEL*HPSSSF
Trigger: GAATGAGGAGCTTGGGTGGCAGAGCTCATGGGTCAG...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACCCAGATTGTGGGTaGCTGACAGCTGACGCAACA +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTADPDCG*LTADAT
Trigger: TGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTC...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACCTGGGTGGGCCCTCTaGCCCTGGACACAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPPGWAL*PWTQSP
Trigger: CGGGGACTGTGTCCAGGGGCAGAGGGCCCACCCAGG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCAGGTCCACCAGGCATaGCGGCTCTCCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHQVHQA*RLSPSL
Trigger: GAGAGAAGGGGAGAGCCGGCATGCCTGGTGGACCTG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTACAGTGGCCAGCCTTaGCTGGCTGGCCCATGGGAC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHYSGQP*LAGPWD
Trigger: GTCCCATGGGCCAGCCAGGCAAGGCTGGCCACTGTA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCATTCTTCCCGTCAGCTaGGCATCCACCTCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTILPVS*ASTSLF
Trigger: AAACAGCGAGGTGGATGCCCAGCTGACGGGAAGAAT...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCCCCTTTCTGCCTTCTaGCTGATTCTTCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: KGFLSDPDCGCLTADATVPLSAF*LILPVS
Trigger: GCTGACGGGAAGAATCAGCCAGAAGGCAGAAAGGGG...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACATCTCCTTTGATGCCTTaGATGCCAGGGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTSPLMP*MPGSPL
Trigger: CAGGGGAGACCCTGGCATCCAAGGCATCAAAGGAGA...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGGCCAGTCACGTTGGCTaGCAGGCTACTACTGTGTTC +
Preference number: 4 (lower is better)
Translates to: KGFLSDPDCGCLTADATVASHVG*QATTVF
Trigger: GAACACAGTAGTAGCCTGCCAGCCAACGTGACTGGC...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp GCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTACCACGTCTTCTGGTaGGTGTGTTTCTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: AGLCTRVRDFYLTQIVGAYHVFW*VCFFSS
Trigger: ACTGCTGAAGAAACACACCCACCAGAAGACGTGGTA...GGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATAAGGTTGGACAGGGCTaGGCACGGCTCACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHKVGQG*ARLTGL
Trigger: GAGCCCTGTGAGCCGTGCCCAGCCCTGTCCAACCTT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACACTTGCCCTGTTTTCCTaGCAAGCCAAAGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTLALFS*QAKAWR
Trigger: CCTCCAGGCTTTGGCTTGCCAGGAAAACAGGGCAAG...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCACGCCCTTCAGTCCTaGGGGCCCTTGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHHALQS*GPLNSW
Trigger: CCAGGAGTTCAAGGGCCCCCAGGACTGAAGGGCGTG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTGGTCCTTTTTCACCTaGTGTTCCTCTGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCWSFFT*CSSESR
Trigger: ACGGGACTCAGAGGAACACCAGGTGAAAAAGGACCA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGCAGTTGTCGAGGCCTaGCACACCAGGGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHAVVEA*HTRDAL
Trigger: CAGGGCATCCCTGGTGTGCCAGGCCTCGACAACTGC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATCCAGGGGGACCCGGTaGGCCCGGAAAGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPSRGTR*ARKAWL
Trigger: CAGCCAGGCTTTCCGGGCCCACCGGGTCCCCCTGGA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTGCAGAGATCCCAGCTaGTCCTGGCTGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHCRDPS*SWLAWR
Trigger: CCTCCAGGCCAGCCAGGACCAGCTGGGATCTCTGCA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTGGGGAACTGCATCCTaGAGGTGTAGTAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCWGTAS*RCSKPF
Trigger: GAATGGCTTACTACACCTCCAGGATGCAGTTCCCCA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGTGGCCAGCCTTGCCTaGCTGGCCCATGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPVASLA*LAHGTR
Trigger: CCGGGTCCCATGGGCCAGCCAGGCAAGGCTGGCCAC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCTTCATGGTTTTCATaGGTGGGTACTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPSWFS*VGTAAP
Trigger: TGGAGCAGCAGTACCCACCCATGAAAACCATGAAGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTTCTCTATCTCTCCGTaGCGGTCACGGGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHFSISP*RSRVPS
Trigger: GCTGGGGACCCGTGACCGTCACGGAGAGATAGAGAA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp GGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCTTTGCATCGGTCACTTaGAACAGATACCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: GRALYQGKGFLSDPDCGCFASVT*NRYHVF
Trigger: GAAGACGTGGTATCTGTTTCAAGTGACCGATGCAAA...GCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACATCCGCTCTTGGCTGTTaGCTTCCAGGGATATCTGTG +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTSALGC*LPGISV
Trigger: CACAGATATCCCTGGAAGTCAACAGCCAAGAGCGGA...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAAGCCACGCTCCCCCTTaGTGCCAGGCAGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPSHAPP*CQAVLG
Trigger: CCCCAGGACTGCCTGGCATCAAGGGGGAGCGTGGCT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATAAGCCTGGCTGGCCTTaGAATCCCTGGTCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHKPGWP*NPWSPF
Trigger: GAAGGGCGACCAGGGATTTCAAGGCCAGCCAGGCTT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACATTCGAACACAGTCATTaGCCCGTGCTCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTFEHSH*PVLPSL
Trigger: GAGAGAAGGGAGCACGGGGCAATGACTGTGTTCGAA...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTCTCAGCATCAGCTTGTaGCAACGCAAGTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTALSISL*QRKSKS
Trigger: GCTCTTCGACTTGCGTTGGCACAAGCTGATGCTGAG...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAATACCTGGTGGACCCTaGGGGCCCGGCTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPIPGGP*GPGCQE
Trigger: CTCCTGGCAGCCGGGCCCGCAGGGTCCACCAGGTAT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTTTCCAGGCACTCCCTaGAGCCCAGGTACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHFPGTP*SPGTPG
Trigger: CCCTGGAGTACCTGGGCTGCAGGGAGTGCCTGGAAA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACAGGCCGGCCAGTGCTaGCAGGGGGACCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPQAGQC*QGDLVC
Trigger: GCAAACCAGGTCCCCCTGGCAGCACTGGCCGGCCTG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCAGGGGGTCCCTCTTTaGCAGCTGCACCATCCGTAC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHQGVPL*QLHHPY
Trigger: GTACGGATGGTGCAGCTGGCAAAGAGGGACCCCCTG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATATGGGTGGGTACTGCTaGTCCATCGGCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHMGGYC*SIGMAP
Trigger: TGGGGCCATGCCGATGGAGCAGCAGTACCCACCCAT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATCCCTTGGAGCCTGGTaGACCAGGCAGGCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPSLGAW*TRQAPL
Trigger: GAGCGGGGCCTGCCTGGTCCACCAGGCTCCAAGGGA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTCCTGTATTTGCCCCATaGCCGAAGGTAGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAPVFAP*PKVAQR
Trigger: TCTTTGGGCTACCTTCGGCCATGGGGCAAATACAGG...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCAGATACCACGTCTTCTaGTGGGTGTGTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCRYHVF*WVCFFS
Trigger: GCTGAAGAAACACACCCACCAGAAGACGTGGTATCT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATCGCCATCCTGGCCCTaGGCCCTGAGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPSPSWP*ALSSRL
Trigger: GAGCCTGGAGCTCAGGGCCCAGGGCCAGGATGGCGA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATGGCCCCACTGGTCCTaGTGGCCCTGGACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPWPHWS*WPWTAS
Trigger: GCTGGCAGTCCAGGGCCACCAGGACCAGTGGGGCCA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGCTCCAGGCTCCCCCTaGGGTCCCTGGACTCCCCTT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPAPGSP*GPWTPL
Trigger: AAGGGGAGTCCAGGGACCCCAGGGGGAGCCTGGAGC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATACCCCTGGAGATCCCTaGGCACCCTTCTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHTPGDP*APFSPV
Trigger: CACTGGAGAGAAGGGTGCCCAGGGATCTCCAGGGGT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTTCTCCTCTCTGGCCTaGCAATCCCGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHFSSLA*QSRRTR
Trigger: CCTGGTCCTCCGGGATTGCCAGGCCAGAGAGGAGAA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGGGGCCCGTGGCACCTaGGTAACCTGGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPGARGT*VTWLPW
Trigger: CCAGGGCAACCAGGTTACCCAGGTGCCACGGGCCCC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATAAGATGAGGTCTCCTTaGGAGGGGCAGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHKMRSP*EGQEHS
Trigger: GGAGTGCTCCTGCCCCTCTCAAGGAGACCTCATCTT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACACTTTGCTCCCCTTTCTaGCTTCTGGCTGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTLCSPF*LLADSS
Trigger: GGAAGAATCAGCCAGAAGGCAGAAAGGGGAGCAAAG...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCCCTTCGGGCCTTCTaGACACTGAAGTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSLRAF*TLKWGI
Trigger: GATGCCCCACTTCAGTGTGCAGAAGGCCCGAAGGGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGTGGAGGACACAAGATaGTGGGCCCCTACAACCGAG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHVEDTR*WAPTTE
Trigger: CTCGGTTGTAGGGGCCCAGCATCTTGTGTCCTCCAC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGACTGTGGATACCCATTTaGATCGGTCACTTGAAACAG +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRLWIPI*IGHLKQ
Trigger: CTGTTTCAAGTGACCGATGCAAATGGGTATCCACAG...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCACGCTCTCCAGCCTTaGCCTGTTTTCCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHHALQP*PVFLAS
Trigger: GCTTGCCAGGAAAACAGGGCAAGGCTGGAGAGCGTG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCAGCATCACCCTTCTaGCCCTTCAGTCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPASPF*PFSPRS
Trigger: AGAGCGTGGACTGAAGGGGCAGAAGGGTGATGCTGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCATGGAACCACTCTTaGCAGGTCCACCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPWNHS*QVHQAC
Trigger: GCATGCCTGGTGGACCTGGCAAGAGTGGTTCCATGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCAGTCCAACAAAGTTCTaGAACCCTTCAGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSPTKF*NPSGSV
Trigger: AACACTGCCTGAAGGGTTCCAGAACTTTGTTGGACT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGTTCCAGGGATATCTGTaGATACCCATTTGCATCGGT +
Preference number: 4 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVFQGYL*IPICIG
Trigger: ACCGATGCAAATGGGTATCCACAGATATCCCTGGAA...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTTCCAGGGATATCTGTaGATACCCATTTGCATCGGT +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCFQGYL*IPICIG
Trigger: ACCGATGCAAATGGGTATCCACAGATATCCCTGGAA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCGCAAGTCGAAGAGCTaGGGCACTGGGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHRKSKS*GTGKMQ
Trigger: CTGCATCTTCCCAGTGCCCCAGCTCTTCGACTTGCG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTTGCCTTCAGACTGTaGATTGATCTCAATGAGCTC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLAFRL*IDLNEL
Trigger: GAGCTCATTGAGATCAATCCACAGTCTGAAGGCAAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACCCCTTCTCTCCGGATaGGCCAGGCAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPPLLSG*ARQGHH
Trigger: GTGGTGGCCTTGCCTGGCCCATCCGGAGAGAAGGGG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACACCCTTCTCTCCAGTaGGGCCAGGTGGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPHPSLQ*GQVVPE
Trigger: CTCGGGGACCACCTGGCCCCACTGGAGAGAAGGGTG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGGACCGGGTCTTCCCTaGGGTCCCATGGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPGPGLP*GPMAPG
Trigger: ACCTGGTGCCATGGGACCCCAGGGAAGACCCGGTCC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCACCATGTCTCCCATaGAGCCAGGCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSPCLP*SQAHQA
Trigger: TGCCTGGTGTGCCTGGCTCCATGGGAGACATGGTGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCAGAGGGATTACAGTaGCCAGCCTTGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSEGLQ*PALPGW
Trigger: CCAGCCAGGCAAGGCTGGCCACTGTAATCCCTCTGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp CAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCATACTGTGTTCCAATTTaGGTCCTTCCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QGKGFLSDPDCGCLTADAYCVPI*VLPAVK
Trigger: CTTCACAGCAGGAAGGACTCAAATTGGAACACAGTA...TGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACGGACATCCCCATCCTaGAGGTTGGACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPRTSPS*RLDRAG
Trigger: CCCAGCCCTGTCCAACCTTCAGGATGGGGATGTCCG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAAGACCTCGCTCTCCTTaGAGGCCAGGCAATCCGGGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPRPRSP*RPGNPG
Trigger: CCCCGGATTGCCTGGCCTTCAAGGAGAGCGAGGTCT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGGGAGGAGGCTGAGCTaGAGTCCACGTGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPGRRLS*SPRAQR
Trigger: CCTCTGTGCACGTGGACTGCAGCTCAGCCTCCTCCC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACTGCCCAGGCCGTCCTaGCATGTCTGTCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPLPRPS*HVCHCP
Trigger: GGGACAGTGACAGACATGGCAGGACGGCCTGGGCAG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACCGGAAGTCCCTGAATaGCAGGCAAACCCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPPEVPE*QANPGL
Trigger: GAGCCCCGGGTTTGCCTGGCATTCAGGGACTTCCGG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCATTTTCTCCTGCAATaGCAATACCAATGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCHFLLQ*QYQCPL
Trigger: AAGGGGACATTGGTATTGGCATTGCAGGAGAAAATG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGCCCATTGGTCCTGTTaGACCCATCTTGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHAHWSC*THLAIA
Trigger: GGCTATGGCAAGATGGGTGCAACAGGACCAATGGGC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATATGCCAGGGATGCCTTaGTGGCCCATTGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHMPGMP*WPIGPV
Trigger: AACAGGACCAATGGGCCAGCAAGGCATCCCTGGCAT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTTCTGCACACTGAAGTaGGGCATCCGGGGAGATTCG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHFCTLK*GIRGDS
Trigger: CGAATCTCCCCGGATGCCCCACTTCAGTGTGCAGAA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAAGTCCAACAAAGTTCTaGAACCCTTCAGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: QGKGFLSDPDCGCLTADASPTKF*NPSGSV
Trigger: AACACTGCCTGAAGGGTTCCAGAACTTTGTTGGACT...TGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCTCCTTTGATGCCTTaGATGCCAGGGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSPLMP*MPGSPL
Trigger: CAGGGGAGACCCTGGCATCCAAGGCATCAAAGGAGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATAACCCACATCTCCACTaGCCCCTGTGGAGGACACAA +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHNPHLH*PLWRTQ
Trigger: TTGTGTCCTCCACAGGGGCCAGTGGAGATGTGGGTT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGCCAGTCACGTTGGCTaGCAGGCTACTACTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHASHVG*QATTVF
Trigger: GAACACAGTAGTAGCCTGCCAGCCAACGTGACTGGC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTAGATACCACGTCTTCTaGTGGGTGTGTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTARYHVF*WVCFFS
Trigger: GCTGAAGAAACACACCCACCAGAAGACGTGGTATCT...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACAAAGTCGCCATCCTaGCCCTGGGCCCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPTKSPS*PWALSS
Trigger: GGAGCTCAGGGCCCAGGGCCAGGATGGCGACTTTGT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCTTGCCTTCAGACTGTaGATTGATCTCAATGAGCTC +
Preference number: 4 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTLAFRL*IDLNEL
Trigger: GAGCTCATTGAGATCAATCCACAGTCTGAAGGCAAG...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTTGCCCTGTTTTCCTaGCAAGCCAAAGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLALFS*QAKAWR
Trigger: CCTCCAGGCTTTGGCTTGCCAGGAAAACAGGGCAAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGTCCCACAGGTCCGGTaGCTCCTTTCACCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPVPQVR*LLSPLE
Trigger: CTCCAGGGGTGAAAGGAGCCACCGGACCTGTGGGAC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAAGCACCAGGAAAACCTaGGGGGCCGATAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPSTRKT*GADRAW
Trigger: CCAGGCCCTATCGGCCCCCCAGGTTTTCCTGGTGCT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGTAACCTGGTTGCCCTaGAGGACCCGGCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPVTWLP*RTRLPL
Trigger: AAGGGGGAGCCGGGTCCTCCAGGGCAACCAGGTTAC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGAGGCCTTCAGATCCTaGGGGGCCCGGCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPEAFRS*GARLSF
Trigger: AAAGGAGAGCCGGGCCCCCCAGGATCTGAAGGCCTC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTCCTGGATCACCCTTaGGACCAGGAGGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLLDHP*DQEVHR
Trigger: TCTATGGACCTCCTGGTCCCAAGGGTGATCCAGGAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCATCTTGCCATAGCCTaGAGGACCTTGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHHLAIA*RTLRTW
Trigger: CCAGGTCCTCAAGGTCCTCCAGGCTATGGCAAGATG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTTCGAACACAGTCATTaGCCCGTGCTCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHFEHSH*PVLPSL
Trigger: GAGAGAAGGGAGCACGGGGCAATGACTGTGTTCGAA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGAATTTGAGTCCTTCCTaGTGTGAAGGTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: KGFLSDPDCGCLTADATVNLSPS*CEGGHC
Trigger: ACAATGCCCACCTTCACAGCAGGAAGGACTCAAATT...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCAAGACCATTTTCTCCTaGAATGCCAATACCAATGTC +
Preference number: 4 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCKTIFS*NANTNV
Trigger: GACATTGGTATTGGCATTGCAGGAGAAAATGGTCTT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACAGGGAGCTCTGGCTaGAGCACCAGAGGAACCCAC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPTGSSG*STRGTH
Trigger: GTGGGTTCCTCTGGTGCTGCAGCCAGAGCTCCCTGT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACTCCCTTCTCTCCCTTaGAGCCTGGTGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPLPSLP*SLVDQA
Trigger: TGCCTGGTCCACCAGGCTCCAAGGGAGAGAAGGGAG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCTGTATTTGCCCCATaGCCGAAGGTAGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPVFAP*PKVAQR
Trigger: TCTTTGGGCTACCTTCGGCCATGGGGCAAATACAGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATATGAGGCTGAGTCGGTaGATGAGGTTGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHMRLSR*MRLKPV
Trigger: GACTGGCTTCAACCTCATCCACCGACTCAGCCTCAT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATGGCAAGCCAAAGCCTaGAGGCCCAGGTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPWQAKA*RPRFPL
Trigger: AAGGGGGAACCTGGGCCTCCAGGCTTTGGCTTGCCA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATCAGAGGAGTGAGAAATaGCATGTCTGTGTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: GFLSDPDCGCLTADATVHQRSEK*HVCVFG
Trigger: CCCAAAAACACAGACATGCCATTTCTCACTCCTCTG...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATAGTGACAAAAAGCACTaGGCGCAGTTGTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSDKKH*AQLSRP
Trigger: AGGCCTCGACAACTGCGCCCAGTGCTTTTTGTCACT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACCCTCTTCTCCTCTCTaGCCTGGCAATCCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPPSSPL*PGNPGG
Trigger: TCCTCCGGGATTGCCAGGCCAGAGAGGAGAAGAGGG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGCTGCCAGGGGGACCTaGTTTGCCACAGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPAARGT*FATVTL
Trigger: AAGGGTGACTGTGGCAAACCAGGTCCCCCTGGCAGC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGGCCCCTTTCTCCGGTaGCTCCTCGGTCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPGPFLR*LLGLLS
Trigger: TGAAAGGAGACCGAGGAGCCACCGGAGAAAGGGGCC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGCTGCTCCATCGGCATaGCCCCAAAGCAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPAAPSA*PQSSQR
Trigger: CCTCTGACTGCTTTGGGGCCATGCCGATGGAGCAGC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCATGGTTTTCATGGGTaGGTACTGCTGCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHHGFHG*VLLLHR
Trigger: CCGATGGAGCAGCAGTACCCACCCATGAAAACCATG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGGCAACAGGGAGCTCTaGCTGCAGCACCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPGNREL*LQHQRN
Trigger: GTTCCTCTGGTGCTGCAGCCAGAGCTCCCTGTTGCC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp ATGAGTGTTGAATGCTACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGTGCATGAATGAGTGTTaGATGCTACTCCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: MSVECYSKTVGRALYQGKCMNEC*MLLQNS
Trigger: ACTGTTTTGGAGTAGCATTCAACACTCATTCATGCA...CTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGTAGCATTCAACACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR TCA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAAAAACACATGTTGCATaGATGAGTGTTGAATGCTAC +
Preference number: 4 (lower is better)
Translates to: CLTADATVHCLKQCWECRKTHVA*MSVECY
Trigger: GTAGCATTCAACACTCATTCATGCAACATGTGTTTT...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTTTGCTCCCCTTTCTaGCTTCTGGCTGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLCSPF*LLADSS
Trigger: GGAAGAATCAGCCAGAAGGCAGAAAGGGGAGCAAAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACTCGAATCCCTTCGCTaGCCTTCTCTGCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPLESLR*PSLLEG
Trigger: GCCCTCAAGCAGAGAAGGGCAGCGAAGGGATTCGAG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACCCTCAAGCCAGGCTTaGCGTCCTTCCCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPPSSQA*RPSHPN
Trigger: GTTTGGATGGGAAGGACGGCAAGCCTGGCTTGAGGG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATTCATGGGTGGGTACTaGTGCTCCATCGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPFMGGY*CSIGMA
Trigger: GGCCATGCCGATGGAGCAGCAGTACCCACCCATGAA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACTCCCCTTTGGGCCCTaGCTTTCCAGGAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPLPFGP*LSRKSN
Trigger: GTTGGACTTCCTGGAAAGCCAGGGCCCAAAGGGGAG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGAGGACACAAGATGCTaGGCCCCTACAACCGAGCTG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPEDTRC*APTTEL
Trigger: CAGCTCGGTTGTAGGGGCCCAGCATCTTGTGTCCTC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGAGCCCAGGCTGTCCTaGCAAACCGTTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPEPRLS*QTVVSR
Trigger: CCTGGAAACAACGGTTTGCCAGGACAGCCTGGGCTC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATTTCTGCCTTCTGGCTaGTTCTTCCCGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPFLPSG*FFPSAG
Trigger: CCCAGCTGACGGGAAGAATCAGCCAGAAGGCAGAAA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACAGTCATTGCCCCGTaGTCCCTTCTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPTVIAP*SLLSLG
Trigger: TCCAAGGGAGAGAAGGGAGCACGGGGCAATGACTGT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGAGACAGGCTTGCCCTaGTCAGCATCCAAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPETGLP*SASKPR
Trigger: TCTAGGCTTGGATGCTGAGCAGGGCAAGCCTGTCTC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACAATCCTCTTACTCCTaGCAAGCCCTGCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPQSSYS*QALPSF
Trigger: GAAGGACGGCAGGGCTTGCCAGGAGTAAGAGGATTG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCATCCAAAGGCAGGTaGGGAATTTCAGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSSKGR*GISAKR
Trigger: CCTTTTGGCTGAAATTCCCCACCTGCCTTTGGATGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTACTGTGTTCCAATTTaGGTCCTTCCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHYCVPI*VLPAVK
Trigger: CTTCACAGCAGGAAGGACTCAAATTGGAACACAGTA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATCCGCTCTTGGCTGTTaGCTTCCAGGGATATCTGTG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPSALGC*LPGISV
Trigger: CACAGATATCCCTGGAAGTCAACAGCCAAGAGCGGA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACTCCTGATGGACCTTTaGTCCCCTTTCTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPLLMDL*SPFCLL
Trigger: CAGAAGGCAGAAAGGGGAGCAAAGGTCCATCAGGAG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATTGTGCACCTGTATTTaGCCCATGGCCGAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPLCTCI*PMAEGS
Trigger: GCTACCTTCGGCCATGGGGCAAATACAGGTGCACAA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATAATTTGAGTCCTTCCTaGTGTGAAGGTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHNLSPS*CEGGHC
Trigger: ACAATGCCCACCTTCACAGCAGGAAGGACTCAAATT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTGTGGATACCCATTTaGATCGGTCACTTGAAACAG +
Preference number: 4 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLWIPI*IGHLKQ
Trigger: CTGTTTCAAGTGACCGATGCAAATGGGTATCCACAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACTCAGCATCAGCTTGTaGCAACGCAAGTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPLSISL*QRKSKS
Trigger: GCTCTTCGACTTGCGTTGGCACAAGCTGATGCTGAG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACTGTTGCACCCATCTTaGCATAGCCTGGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPLLHPS*HSLEDL
Trigger: AAGGTCCTCCAGGCTATGGCAAGATGGGTGCAACAG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAATTCTTCCCGTCAGCTaGGCATCCACCTCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPILPVS*ASTSLF
Trigger: AAACAGCGAGGTGGATGCCCAGCTGACGGGAAGAAT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAAAGCCTAGAAATACATaGCCCACAGGCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPKPRNT*PTGLMG
Trigger: ACCCATGAGGCCTGTGGGCCATGTATTTCTAGGCTT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATACCACGTCTTCTGGTaGGTGTGTTTCTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPYHVFW*VCFFSS
Trigger: ACTGCTGAAGAAACACACCCACCAGAAGACGTGGTA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR TCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATTTGCATCGGTCACTTaGAACAGATACCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPFASVT*NRYHVF
Trigger: GAAGACGTGGTATCTGTTTCAAGTGACCGATGCAAA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR GCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAAGGATTACAGGTATATaGCCCTGTACCCAAAATGCC +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPRITGI*PCTQNA
Trigger: GGCATTTTGGGTACAGGGGCATATACCTGTAATCCT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACCCCTTTTTCACCTTTaGTACCAGGCAATCCTCTTA +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPPLFHL*YQAILL
Trigger: TAAGAGGATTGCCTGGTACCAAAGGTGAAAAAGGGG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CCA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGAGTCCTATAAGCTTTaGCCATTTATTCCCAACGGA +
Preference number: 4 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPESYKL*PFIPNG
Trigger: TCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS GCA 90 bp ACGGGTCCCCAGCTTCCTGGCGCTCGAGCTCTCCCGGCTGTCTGCTaGCCGGCGCACGCCTGCCGGGGACTGCCGGCCACTCCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TGPQLPGARALPAVC*PAHACRGLPATPGG
Trigger: CCCACCCGGAGTGGCCGGCAGTCCCCGGCAGGCGTGCGCCGGGCAGCAGACAGCCGGGAGAGCTCGAGCGCCAGGAAGCTGGGGACCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000532877.1
CDS GCA 90 bp CCTGGCGCTCGAGCTCTCCCGGCTGTCTGCTGCCCGGCGCACGCCTaGCGGGGACTGCCGGCCACTCCGGGTGGGGGAAGAGAGGCGGTT +
Preference number: 5 (lower is better)
Translates to: PGARALPAVCCPAHA*RGLPATPGGGREAV
Trigger: AACCGCCTCTCTTCCCCCACCCGGAGTGGCCGGCAGTCCCCGGCAGGCGTGCGCCGGGCAGCAGACAGCCGGGAGAGCTCGAGCGCCAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000532877.1
CDS GCA 90 bp GTCACGGGTCCCCAGCTTCCTGGCGCTCGAGCTCTCCCGGCTGTCTaGTGCCCGGCGCACGCCTGCCGGGGACTGCCGGCCACTCCGGGT +
Preference number: 5 (lower is better)
Translates to: VTGPQLPGARALPAV*CPAHACRGLPATPG
Trigger: ACCCGGAGTGGCCGGCAGTCCCCGGCAGGCGTGCGCCGGGCAGCAGACAGCCGGGAGAGCTCGAGCGCCAGGAAGCTGGGGACCCGTGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000532877.1
CDS CCA 90 bp GGAGGCCCTGGTGGCCCAACGTGTCCCGGGGGACCGGGTCTTCCCTaGGGTCCCATGGCACCAGGTTCACCCTCTGCGCCAGGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: GGPGGPTCPGGPGLP*GPMAPGSPSAPGRP
Trigger: TGGCCGGCCTGGCGCAGAGGGTGAACCTGGTGCCATGGGACCCCAGGGAAGACCCGGTCCCCCGGGACACGTTGGGCCACCAGGGCCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000440437.1
ENST00000488128.6
ENST00000488897.5
CDS GCA 90 bp CCGGGTTGGCCGGGTTTACCAGGTCGGCCCACGCCTTCGGGGCCCTaGTCTCCTTTGGGGCCGGGCTGCCCAGGCCGTCCTGCCATGTCT +
Preference number: 5 (lower is better)
Translates to: PGWPGLPGRPTPSGP*SPLGPGCPGRPAMS
Trigger: AGACATGGCAGGACGGCCTGGGCAGCCCGGCCCCAAAGGAGAGCAGGGCCCCGAAGGCGTGGGCCGACCTGGTAAACCCGGCCAACCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS TCA 90 bp CACAGGCCTCATGGGTCGTCGGGGCCCCAGAGGCTGGGAGGAGGCTaGGCTGCAGTCCACGTGCACAGAGGCCACACGTCCAGCCACACT +
Preference number: 5 (lower is better)
Translates to: HRPHGSSGPQRLGGG*AAVHVHRGHTSSHT
Trigger: AGTGTGGCTGGACGTGTGGCCTCTGTGCACGTGGACTGCAGCTCAGCCTCCTCCCAGCCTCTGGGGCCCCGACGACCCATGAGGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS GCA 90 bp CTCCTGCAGGGCCCGGTGGCCCAACAGGCCCCATGGAACCACTCTTaGCAGGTCCACCAGGCATGCCGGCTCTCCCCTTCTCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LLQGPVAQQAPWNHS*QVHQACRLSPSLLP
Trigger: AGGCAGGAGAGAAGGGGAGAGCCGGCATGCCTGGTGGACCTGGCAAGAGTGGTTCCATGGGGCCTGTTGGGCCACCGGGCCCTGCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS CCA 90 bp TGGAGCACCTGGCCTGCCCGGAGCACCATCCTTCCCTGGAGGCCCTaGTCGTCCCGGAGCTGCCGCCATCTCCATGGGGAACTGCATCCT +
Preference number: 5 (lower is better)
Translates to: WSTWPARSTILPWRP*SSRSCRHLHGELHP
Trigger: AGGATGCAGTTCCCCATGGAGATGGCGGCAGCTCCGGGACGACCAGGGCCTCCAGGGAAGGATGGTGCTCCGGGCAGGCCAGGTGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS CCA 90 bp TGCTGCTCCATCGGCATGGCCCCAAAGCAGTCAGAGGGATTACAGTaGCCAGCCTTGCCTGGCTGGCCCATGGGACCCGGGGGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: CCSIGMAPKQSEGLQ*PALPGWPMGPGGPG
Trigger: CCCTGGGCCCCCGGGTCCCATGGGCCAGCCAGGCAAGGCTGGCCACTGTAATCCCTCTGACTGCTTTGGGGCCATGCCGATGGAGCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373672.8
ENST00000488128.6
ENST00000488897.5
CDS TCA 90 bp TCTCCGGATGGGCCAGGCAAGGCCACCACACGGACATCCCCATCCTaGAGGTTGGACAGGGCTGGGCACGGCTCACAGGGCTCCCCCTTC +
Preference number: 5 (lower is better)
Translates to: SPDGPGKATTRTSPS*RLDRAGHGSQGSPF
Trigger: GAAGGGGGAGCCCTGTGAGCCGTGCCCAGCCCTGTCCAACCTTCAGGATGGGGATGTCCGTGTGGTGGCCTTGCCTGGCCCATCCGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000474000.5
ENST00000482478.5
ENST00000529928.1
CDS TCA 90 bp GTTGCCCTGGAGGACCCGGCTCCCCCTTGTCTCCAGTCAGGCCCGTaGGACCTCGCTCTCCTTGAAGGCCAGGCAATCCGGGGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: VALEDPAPPCLQSGP*DLALLEGQAIRGSQ
Trigger: TTGGCTCCCCCGGATTGCCTGGCCTTCAAGGAGAGCGAGGTCTCACGGGCCTGACTGGAGACAAGGGGGAGCCGGGTCCTCCAGGGCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS GCA 90 bp GGCCCTTCTCTGCTTGAGGGCCAGGTGGGCCAGGTGATCCAACTTTaGCTGGGAATCCAGGGGGACCCGGTGGGCCCGGAAAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GPSLLEGQVGQVIQL*LGIQGDPVGPESLA
Trigger: AGCCAGGCTTTCCGGGCCCACCGGGTCCCCCTGGATTCCCAGGCAAAGTTGGATCACCTGGCCCACCTGGCCCTCAAGCAGAGAAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440437.1
CDS GCA 90 bp TGGAGGCGAGGGGCCCGCAGAGGGACCATCTGTCCCGGCTGTTCCTaGAACCTGCACCCACTGCGAGGACAAGCCACGAGGAGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: WRRGARRGTICPGCS*NLHPLRGQATRSEA
Trigger: AGCCTCACTCCTCGTGGCTTGTCCTCGCAGTGGGTGCAGGTTGCAGGAACAGCCGGGACAGATGGTCCCTCTGCGGGCCCCTCGCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479100.1
CDS GCA 90 bp GGCCCTGAACTCCAGGCTCTCCTGACAGTCCTGGCCGCCCTGTGGTaGCCGGCGTTCCAGGGTCTCCAGGATTCCCAGCATCACCCTTCT +
Preference number: 5 (lower is better)
Translates to: GPELQALLTVLAALW*PAFQGLQDSQHHPS
Trigger: AGAAGGGTGATGCTGGGAATCCTGGAGACCCTGGAACGCCGGGCACCACAGGGCGGCCAGGACTGTCAGGAGAGCCTGGAGTTCAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000474000.5
ENST00000482478.5
CDS GCA 90 bp TGCCCTTCTCTGCTTGAGGGCCAGGTGGGCCAGGTGATCCAACTTTaGCTGGGAATCCAGGGGGACCCGGTGGGCCCGGAAAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: CPSLLEGQVGQVIQL*LGIQGDPVGPESLA
Trigger: AGCCAGGCTTTCCGGGCCCACCGGGTCCCCCTGGATTCCCAGGCAAAGTTGGATCACCTGGCCCACCTGGCCCTCAAGCAGAGAAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373672.8
ENST00000470799.5
ENST00000488128.6
CDS GCA 90 bp GCCCGGAGCACCATCCTTCCCTGGAGGCCCTGGTCGTCCCGGAGCTaGCGCCATCTCCATGGGGAACTGCATCCTGGAGGTGTAGTAAGC +
Preference number: 5 (lower is better)
Translates to: ARSTILPWRPWSSRS*RHLHGELHPGGVVS
Trigger: GCTTACTACACCTCCAGGATGCAGTTCCCCATGGAGATGGCGGCAGCTCCGGGACGACCAGGGCCTCCAGGGAAGGATGGTGCTCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS GCA 90 bp GAGGGGCCCGCAGAGGGACCATCTGTCCCGGCTGTTCCTGCAACCTaGACCCACTGCGAGGACAAGCCACGAGGAGTGAGGCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: EGPAEGPSVPAVPAT*THCEDKPRGVRLER
Trigger: CCTTTCCAGCCTCACTCCTCGTGGCTTGTCCTCGCAGTGGGTGCAGGTTGCAGGAACAGCCGGGACAGATGGTCCCTCTGCGGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479100.1
CDS CCA 90 bp GGGACCCGGGGGCCCAGGGATGCCAGGGATGCCTTGCTGGCCCATTaGTCCTGTTGCACCCATCTTGCCATAGCCTGGAGGACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: GTRGPRDARDALLAH*SCCTHLAIAWRTLR
Trigger: CCTCAAGGTCCTCCAGGCTATGGCAAGATGGGTGCAACAGGACCAATGGGCCAGCAAGGCATCCCTGGCATCCCTGGGCCCCCGGGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373672.8
ENST00000488128.6
ENST00000488897.5
CDS CCA 90 bp GCCGGGCACAGAGGGGCAGGGCCGCACGACACCCAGAAACCCAACTaGCTGATATCACATGCCCCGCCTTGGAGCAGACTGGGACTGGAG +
Preference number: 5 (lower is better)
Translates to: AGHRGAGPHDTQKPN*LISHAPPWSRLGLE
Trigger: CTCCAGTCCCAGTCTGCTCCAAGGCGGGGCATGTGATATCAGCCAGTTGGGTTTCTGGGTGTCGTGCGGCCCTGCCCCTCTGTGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS TCA 90 bp AATCCCTTCGCTGCCCTTCTCTGCTTGAGGGCCAGGTGGGCCAGGTaGTCCAACTTTGCCTGGGAATCCAGGGGGACCCCCAGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: NPFAALLCLRARWAR*SNFAWESRGTPSLA
Trigger: GGCCAGGCTGGGGGTCCCCCTGGATTCCCAGGCAAAGTTGGATCACCTGGCCCACCTGGCCCTCAAGCAGAGAAGGGCAGCGAAGGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482910.1
CDS GCA 90 bp GGGCCCAGGGATGCCAGGGATGCCTTGCTGGCCCATTGGTCCTGTTaGACCCATCTTGCCATAGCCTGGAGGACCTTGAGGACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GPRDARDALLAHWSC*THLAIAWRTLRTWG
Trigger: CCCCCAGGTCCTCAAGGTCCTCCAGGCTATGGCAAGATGGGTGCAACAGGACCAATGGGCCAGCAAGGCATCCCTGGCATCCCTGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373672.8
ENST00000488128.6
ENST00000488897.5
CDS CCA 90 bp TTGCCAGGTCCACCAGGCATGCCGGCTCTCCCCTTCTCTCCTGCCTaGCCCTTCTGTCCTGCAGCTCCTGGATCACCCTTGGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: LPGPPGMPALPFSPA*PFCPAAPGSPLGPG
Trigger: TCCTGGTCCCAAGGGTGATCCAGGAGCTGCAGGACAGAAGGGCCAGGCAGGAGAGAAGGGGAGAGCCGGCATGCCTGGTGGACCTGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS CCA 90 bp AGGGATGCCCTGGTCTCCCTTCTCTCCCTTCTCCACGAGGTACCCTaGGTGGGCCCTCTGCCCCTGGACACAGTCCCCGCAGATACTTCC +
Preference number: 5 (lower is better)
Translates to: RDALVSLLSLLHEVP*VGPLPLDTVPADTS
Trigger: GGAAGTATCTGCGGGGACTGTGTCCAGGGGCAGAGGGCCCACCCAGGGTACCTCGTGGAGAAGGGAGAGAAGGGAGACCAGGGCATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479100.1
CDS TCA 90 bp GGCACAGAGGGGCAGGGCCGCACGACACCCAGAAACCCAACTGGCTaGTATCACATGCCCCGCCTTGGAGCAGACTGGGACTGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: GTEGQGRTTPRNPTG*YHMPRLGADWDWSQ
Trigger: TTGGCTCCAGTCCCAGTCTGCTCCAAGGCGGGGCATGTGATATCAGCCAGTTGGGTTTCTGGGTGTCGTGCGGCCCTGCCCCTCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS GCA 90 bp AAGGCAGAGCAATTAACGACACCTGGCAGAAGGAGCCGGCCAAGGTaGCGGGCACAGAGGGGCAGGGCCGCACGACACCCAGAAACCCAA +
Preference number: 5 (lower is better)
Translates to: KAEQLTTPGRRSRPR*RAQRGRAARHPETQ
Trigger: TTGGGTTTCTGGGTGTCGTGCGGCCCTGCCCCTCTGTGCCCGGCACCTTGGCCGGCTCCTTCTGCCAGGTGTCGTTAATTGCTCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CCA 90 bp AACACAGTCATTGCCCCGTGCTCCCTTCTCTCCCTTGGAGCCTGGTaGACCAGGCAGGCCCCGCTCACCTTTCCCTCCATTGCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: NTVIAPCSLLSLGAW*TRQAPLTFPSIAVP
Trigger: CGGGACAGCAATGGAGGGAAAGGTGAGCGGGGCCTGCCTGGTCCACCAGGCTCCAAGGGAGAGAAGGGAGCACGGGGCAATGACTGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373667.4
CDS CCA 90 bp TGGGGCACTGGGAAGATGCAGGACACAAAGTCGCCATCCTGGCCCTaGGCCCTGAGCTCCAGGCTCCGCTCTTGGCTGTTGACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: WGTGKMQDTKSPSWP*ALSSRLRSWLLTSR
Trigger: CCTGGAAGTCAACAGCCAAGAGCGGAGCCTGGAGCTCAGGGCCCAGGGCCAGGATGGCGACTTTGTGTCCTGCATCTTCCCAGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 90 bp AGGGATGCCCTGGTCTCCCTTCTCTCCCTTCTCCACGAGGTACCCTaGGTGGGCCCTCTGCCCCTGGACACAGTCCCCGCAGATACTCTT +
Preference number: 5 (lower is better)
Translates to: RDALVSLLSLLHEVP*VGPLPLDTVPADTL
Trigger: AAGAGTATCTGCGGGGACTGTGTCCAGGGGCAGAGGGCCCACCCAGGGTACCTCGTGGAGAAGGGAGAGAAGGGAGACCAGGGCATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373672.8
ENST00000458715.5
CDS CCA 90 bp AGCCCAGCTTGCCCAAAAGGCACCCTAGAGTCTCCTGGAAAGCCCTaGGAGGTTGCCATGGAGACCGGAGGTGGCACTCTAGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: SPACPKGTLESPGKP*EVAMETGGGTLAQP
Trigger: GGGCTGGGCTAGAGTGCCACCTCCGGTCTCCATGGCAACCTCCCAGGGCTTTCCAGGAGACTCTAGGGTGCCTTTTGGGCAAGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482478.5
CDS CCA 90 bp ATGCCCTGGTCTCCCTTCTCTCCCTTCTCCACGAGGTACCCTGGGTaGGCCCTCTGCCCCTGGACACAGTCCCCGCAGATACTTCCCAAC +
Preference number: 5 (lower is better)
Translates to: MPWSPFSPFSTRYPG*ALCPWTQSPQILPN
Trigger: GTTGGGAAGTATCTGCGGGGACTGTGTCCAGGGGCAGAGGGCCCACCCAGGGTACCTCGTGGAGAAGGGAGAGAAGGGAGACCAGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479100.1
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGGGCCCTGCTCTCCTTaGGGGCCGGGCTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCGPCSP*GPGCPG
Trigger: GCCTGGGCAGCCCGGCCCCAAAGGAGAGCAGGGCCC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS CCA 90 bp TCGAACACAGTCATTGCCCCGTGCTCCCTTCTCTCCCTTGGAGCCTaGTGGACCAGGCAGGCCCCGCTCACCTTTCCCTCCATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SNTVIAPCSLLSLGA*WTRQAPLTFPSIAV
Trigger: GACAGCAATGGAGGGAAAGGTGAGCGGGGCCTGCCTGGTCCACCAGGCTCCAAGGGAGAGAAGGGAGCACGGGGCAATGACTGTGTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373667.4
CDS CCA 90 bp AACGAGACAGGCTTGCCCTGCTCAGCATCCAAGCCTAGAAATACATaGCCCACAGGCCTCATGGGTCGTCGGGGCCCCAGAGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: NETGLPCSASKPRNT*PTGLMGRRGPRGWE
Trigger: CTCCCAGCCTCTGGGGCCCCGACGACCCATGAGGCCTGTGGGCCATGTATTTCTAGGCTTGGATGCTGAGCAGGGCAAGCCTGTCTCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 90 bp GACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTaGCCTAGAGGCTCAGTGGGCCCTCCTTGCCACCCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: DATVHCLKQCWECRA*PRGSVGPPCHPGRQ
Trigger: CTGCCTCCCAGGGTGGCAAGGAGGGCCCACTGAGCCTCTAGGCCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS CCA 90 bp ATGCCCTGGTCTCCCTTCTCTCCCTTCTCCACGAGGTACCCTGGGTaGGCCCTCTGCCCCTGGACACAGTCCCCGCAGATACTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: MPWSPFSPFSTRYPG*ALCPWTQSPQILLR
Trigger: CCTTAAGAGTATCTGCGGGGACTGTGTCCAGGGGCAGAGGGCCCACCCAGGGTACCTCGTGGAGAAGGGAGAGAAGGGAGACCAGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373672.8
ENST00000458715.5
CDS CCA 90 bp ATGCCCTGGTCTCCCTTCTCTCCCTTCTCCACGAGGTACCCTGGGTaGGCCCTCTGCCCCTGGACACAGTCCCCGCAGATACTAATTGGC +
Preference number: 5 (lower is better)
Translates to: MPWSPFSPFSTRYPG*ALCPWTQSPQILIG
Trigger: GCCAATTAGTATCTGCGGGGACTGTGTCCAGGGGCAGAGGGCCCACCCAGGGTACCTCGTGGAGAAGGGAGAGAAGGGAGACCAGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468459.5
CDS CCA 90 bp AGGGATGCCCTGGTCTCCCTTCTCTCCCTTCTCCACGAGGTACCCTaGGTGGGCCCTCTGCCCCTGGACACAGTCCCCGCAGATACTAAT +
Preference number: 5 (lower is better)
Translates to: RDALVSLLSLLHEVP*VGPLPLDTVPADTN
Trigger: ATTAGTATCTGCGGGGACTGTGTCCAGGGGCAGAGGGCCCACCCAGGGTACCTCGTGGAGAAGGGAGAGAAGGGAGACCAGGGCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468459.5
CDS GCA 90 bp CTGACAGCTCCCAGGTGCTCAGTAAGGGTGGGCTCCAGCCCAGCTTaGCCAAAAGGCACCCTAGAGTCTCCTGGAAAGCCCTGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: LTAPRCSVRVGSSPA*PKGTLESPGKPWEV
Trigger: AACCTCCCAGGGCTTTCCAGGAGACTCTAGGGTGCCTTTTGGGCAAGCTGGGCTGGAGCCCACCCTTACTGAGCACCTGGGAGCTGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482478.5
CDS CCA 90 bp GGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTaGGAGTGCAGAGCCTGGCCTAGAGGCTCAGTGGGCCCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: GCLTADATVHCLKQC*ECRAWPRGSVGPPC
Trigger: GCAAGGAGGGCCCACTGAGCCTCTAGGCCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGGGCCCTGCTCTCCTTaGGGGCCGGGCTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAGPCSP*GPGCPG
Trigger: GCCTGGGCAGCCCGGCCCCAAAGGAGAGCAGGGCCC...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGGACCCGGCTCCCCCTaGTCTCCAGTCAGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCGPGSP*SPVRPV
Trigger: CACGGGCCTGACTGGAGACAAGGGGGAGCCGGGTCC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS TCA 90 bp AAGCTGCCGGGACCTCAGAGAACCCGTGTCGTTAGCTACCGTGCCTaGAGGGGGACAACAAACACGGAGGACGGAGGTGAAGGCACGACA +
Preference number: 5 (lower is better)
Translates to: KLPGPQRTRVVSYRA*RGTTNTEDGGEGTT
Trigger: TGTCGTGCCTTCACCTCCGTCCTCCGTGTTTGTTGTCCCCCTTCAGGCACGGTAGCTAACGACACGGGTTCTCTGAGGTCCCGGCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS TCA 90 bp GCCCTGCCAAGCAGCAGGGCAGCAAACCTGTGCCAGCCTGCAATGTaGAGCCCTAAAGCTTTGGCATCTCTGCTGGGCTCTGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: ALPSSRAANLCQPAM*SPKALASLLGSEPG
Trigger: ACCTGGCTCAGAGCCCAGCAGAGATGCCAAAGCTTTAGGGCTTCACATTGCAGGCTGGCACAGGTTTGCTGCCCTGCTGCTTGGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS GCA 90 bp ACGTGCACAGAGGCCACACGTCCAGCCACACTCAGCATCAGCTTGTaGCAACGCAAGTCGAAGAGCTGGGGCACTGGGAAGATGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TCTEATRPATLSISL*QRKSKSWGTGKMQD
Trigger: GTCCTGCATCTTCCCAGTGCCCCAGCTCTTCGACTTGCGTTGGCACAAGCTGATGCTGAGTGTGGCTGGACGTGTGGCCTCTGTGCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS GCA 90 bp CTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTaGAGAGCCTGGCCTAGAGGCTCAGTGGGCCCTCCTTGCCACCCT +
Preference number: 5 (lower is better)
Translates to: LTADATVHCLKQCWE*RAWPRGSVGPPCHP
Trigger: AGGGTGGCAAGGAGGGCCCACTGAGCCTCTAGGCCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS GCA 90 bp TGTGGGTGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTaGTGGGAGTGCAGAGCCTGGCCTAGAGGCTCAGTGGGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: CGCLTADATVHCLKQ*WECRAWPRGSVGPP
Trigger: AGGAGGGCCCACTGAGCCTCTAGGCCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCACCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS CCA 90 bp ACTCAGCATCAGCTTGTGCCAACGCAAGTCGAAGAGCTGGGGCACTaGGAAGATGCAGGACACAAAGTCGCCATCCTGGCCCTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: TQHQLVPTQVEELGH*EDAGHKVAILALGP
Trigger: AGGGCCCAGGGCCAGGATGGCGACTTTGTGTCCTGCATCTTCCCAGTGCCCCAGCTCTTCGACTTGCGTTGGCACAAGCTGATGCTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 90 bp CCAGCCACACTCAGCATCAGCTTGTGCCAACGCAAGTCGAAGAGCTaGGGCACTGGGAAGATGCAGGACACAAAGTCGCCATCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: PATLSISLCQRKSKS*GTGKMQDTKSPSWP
Trigger: GGGCCAGGATGGCGACTTTGTGTCCTGCATCTTCCCAGTGCCCCAGCTCTTCGACTTGCGTTGGCACAAGCTGATGCTGAGTGTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 90 bp CCTTCCCTGGAGGCCCTGGTCGTCCCGGAGCTGCCGCCATCTCCATaGGGAACTGCATCCTGGAGGTGTAGTAAGCCATTCTCTCATCAA +
Preference number: 5 (lower is better)
Translates to: PSLEALVVPELPPSP*GTASWRCSKPFSHQ
Trigger: TTGATGAGAGAATGGCTTACTACACCTCCAGGATGCAGTTCCCCATGGAGATGGCGGCAGCTCCGGGACGACCAGGGCCTCCAGGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS CCA 90 bp TTGCCAGGTCCACCAGGCATGCCGGCTCTCCCCTTCTCTCCTGCCTaGCCCTTCTGTCCTGCAGCTCCTGGATCACCCTACAAAGATAGA +
Preference number: 5 (lower is better)
Translates to: LPGPPGMPALPFSPA*PFCPAAPGSPYKDR
Trigger: TCTATCTTTGTAGGGTGATCCAGGAGCTGCAGGACAGAAGGGCCAGGCAGGAGAGAAGGGGAGAGCCGGCATGCCTGGTGGACCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461217.1
CDS-3UTR CAA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGGCTCCCTTCTCTCCCTaGGAGCCTGGTGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: TADATVHCLKQCWECRAWAPFSP*EPGGPG
Trigger: GCCTGGTCCACCAGGCTCCAAGGGAGAGAAGGGAGC...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGCTGCCCTTGTCTCCCTaGGGGCCTGGTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVLPLSP*GPGGPP
Trigger: AGGTGGCCCACCAGGCCCCAAGGGAGACAAGGGCAG...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGAGTCCCGTCTGTCCTaGCTGCCCATCACGGCCCGG +
Preference number: 5 (lower is better)
Translates to: CLTADATVHCLKQCWECRESRLS*LPITAR
Trigger: CCGGGCCGTGATGGGCAGCAAGGACAGACGGGACTC...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGAGTCCCGTCTGTCCTaGCTGCCCATCACGGCCCGG +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCESRLS*LPITAR
Trigger: CCGGGCCGTGATGGGCAGCAAGGACAGACGGGACTC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS GCA 90 bp ACCTGTGCCAGCCTGCAATGTGAAGCCCTAAAGCTTTGGCATCTCTaGTGGGCTCTGAGCCAGGTGCCTGGCAGGGCCCCAAGAACTACT +
Preference number: 5 (lower is better)
Translates to: TCASLQCEALKLWHL*WALSQVPGRAPRTT
Trigger: AGTAGTTCTTGGGGCCCTGCCAGGCACCTGGCTCAGAGCCCAGCAGAGATGCCAAAGCTTTAGGGCTTCACATTGCAGGCTGGCACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CCA 90 bp GTCTCCCCTGGCTGGTACAGGATCACCAGGCTCCCCTTTGGGCCCTaGCTTTCCAGGAAGTCCAACAAAGTTCTGGAACCCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VSPGWYRITRLPFGP*LSRKSNKVLEPFRQ
Trigger: CTGCCTGAAGGGTTCCAGAACTTTGTTGGACTTCCTGGAAAGCCAGGGCCCAAAGGGGAGCCTGGTGATCCTGTACCAGCCAGGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373667.4
ENST00000373668.7
ENST00000373672.8
ENST00000529928.1
CDS CCA 90 bp TGCCAGGGTCTCCCCTGGCTGGTACAGGATCACCAGGCTCCCCTTTaGGCCCTGGCTTTCCAGGAAGTCCAACAAAGTTCTGGAACCCTT +
Preference number: 5 (lower is better)
Translates to: CQGLPWLVQDHQAPL*ALAFQEVQQSSGTL
Trigger: AAGGGTTCCAGAACTTTGTTGGACTTCCTGGAAAGCCAGGGCCCAAAGGGGAGCCTGGTGATCCTGTACCAGCCAGGGGAGACCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373667.4
ENST00000373668.7
ENST00000373672.8
ENST00000529928.1
CDS CCA 90 bp CTCCTCCAGGCAGAAGCAGCGGGTGTAGACCTTGCCTTCAGACTGTaGATTGATCTCAATGAGCTCATTGCTCTGGGTGTCCCGGCGGGC +
Preference number: 5 (lower is better)
Translates to: LLQAEAAGVDLAFRL*IDLNELIALGVPAG
Trigger: GCCCGCCGGGACACCCAGAGCAATGAGCTCATTGAGATCAATCCACAGTCTGAAGGCAAGGTCTACACCCGCTGCTTCTGCCTGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 90 bp AAAGGGGCTCAGGGAGCTCAGGAGCGGGGAGCAGTTCCCTCTGGCTaGGGATCAGGGAAAGTGTCACAGAAGTGTCACCAGATGCTAGAC +
Preference number: 5 (lower is better)
Translates to: KGAQGAQERGAVPSG*GSGKVSQKCHQMLD
Trigger: GTCTAGCATCTGGTGACACTTCTGTGACACTTTCCCTGATCCCCAGCCAGAGGGAACTGCTCCCCGCTCCTGAGCTCCCTGAGCCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS CCA 90 bp ACGCAGGAGAGGAGGGAGAGGAGAAAACGGAAAGGAGTCAGAGACTaGGAGGATGTCCAAGCTGCCGGGACCTCAGAGAACCCGTGTCGT +
Preference number: 5 (lower is better)
Translates to: TQERRERRKRKGVRD*EDVQAAGTSENPCR
Trigger: ACGACACGGGTTCTCTGAGGTCCCGGCAGCTTGGACATCCTCCCAGTCTCTGACTCCTTTCCGTTTTCTCCTCTCCCTCCTCTCCTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGCTCCCTTCTCTCCCTaGGAGCCTGGTGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCAPFSP*EPGGPG
Trigger: GCCTGGTCCACCAGGCTCCAAGGGAGAGAAGGGAGC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCATCCCCGAGCTGCCCTaGTCTCCCTTGGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCIPELP*SPLGPG
Trigger: ACCAGGCCCCAAGGGAGACAAGGGCAGCTCGGGGAT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS CCA 90 bp TGTGCCAGCCTGCAATGTGAAGCCCTAAAGCTTTGGCATCTCTGCTaGGCTCTGAGCCAGGTGCCTGGCAGGGCCCCAAGAACTACTTTC +
Preference number: 5 (lower is better)
Translates to: CASLQCEALKLWHLC*ALSQVPGRAPRTTF
Trigger: GAAAGTAGTTCTTGGGGCCCTGCCAGGCACCTGGCTCAGAGCCCAGCAGAGATGCCAAAGCTTTAGGGCTTCACATTGCAGGCTGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CCA 90 bp CACGACACCCAGAAACCCAACTGGCTGATATCACATGCCCCGCCTTaGAGCAGACTGGGACTGGAGCCAAGGAAGAGGAAGCGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: HDTQKPNWLISHAPP*SRLGLEPRKRKRRG
Trigger: TCCTCTTCGCTTCCTCTTCCTTGGCTCCAGTCCCAGTCTGCTCCAAGGCGGGGCATGTGATATCAGCCAGTTGGGTTTCTGGGTGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS-3UTR CAA 90 bp GGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCTCACCTTTCCCTCCCTaGGGGCCAGAGGGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GRALYQGKGFLSDPDCGCSPFPP*GPEGAS
Trigger: ACTTGCTCCCTCTGGCCCCAAGGGAGGGAAAGGTGA...GCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCAGGGGGTCCCTCTTaGCCAGCTGCACCATCCGTA +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPGGPS*PAAPSV
Trigger: TACGGATGGTGCAGCTGGCAAAGAGGGACCCCCTGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS GCA 90 bp CGTCCTGCCACCTCCTGGCTCACTGCAAGCCAGCCAGCAAATGGCTaGCCTCTTCTCCTCCAGCATAGCTCTGATTATGTCACTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RPATSWLTASQPANG*PLLLQHSSDYVTLL
Trigger: CAAGAGAGTGACATAATCAGAGCTATGCTGGAGGAGAAGAGGGCAGCCATTTGCTGGCTGGCTTGCAGTGAGCCAGGAGGTGGCAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470799.5
CDS GCA 90 bp GAGAAAAGTGCATGCCAGAGGGAACCTAAGAGAAGGATAAAGACTTaGAAGTGGGCACATGCCTGGCCTGGCCAGGGCATCTGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: EKSACQREPKRRIKT*KWAHAWPGQGIWGS
Trigger: GCTCCCCCAGATGCCCTGGCCAGGCCAGGCATGTGCCCACTTGCAAGTCTTTATCCTTCTCTTAGGTTCCCTCTGGCATGCACTTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS GCA 90 bp CCCAGGAGGATCTGTCTTCATCTGCAAAGCATCCCCTTTCCTTGCTaGCCCATGAGGAAGGGACAGGGCATCTTCTCCAGTGCTGACCCA +
Preference number: 5 (lower is better)
Translates to: PRRICLHLQSIPFPC*PMRKGQGIFSSADP
Trigger: TGGGTCAGCACTGGAGAAGATGCCCTGTCCCTTCCTCATGGGGCAGCAAGGAAAGGGGATGCTTTGCAGATGAAGACAGATCCTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS GCA 90 bp CCACTGGCCTTCCTGTGTCTCCTCTCTGTGGCTAAAGCCGTAACTTaGAGCTGGGCTTCATCCACTCGTGAGCTTCTCCTCTCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: PLAFLCLLSVAKAVT*SWASSTRELLLSSP
Trigger: TGGGCTTGAGAGGAGAAGCTCACGAGTGGATGAAGCCCAGCTGCAAGTTACGGCTTTAGCCACAGAGAGGAGACACAGGAAGGCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488128.6
ENST00000488897.5
CDS GCA 90 bp GAGGAGAAAACGGAAAGGAGTCAGAGACTGGGAGGATGTCCAAGCTaGCGGGACCTCAGAGAACCCGTGTCGTTAGCTACCGTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: EEKTERSQRLGGCPS*RDLREPVSLATVPE
Trigger: TTCAGGCACGGTAGCTAACGACACGGGTTCTCTGAGGTCCCGGCAGCTTGGACATCCTCCCAGTCTCTGACTCCTTTCCGTTTTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CCA 90 bp GCCTTCCTGTGTCTCCTCTCTGTGGCTAAAGCCGTAACTTGCAGCTaGGCTTCATCCACTCGTGAGCTTCTCCTCTCAAGCCCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: AFLCLLSVAKAVTCS*ASSTRELLLSSPAS
Trigger: ACTGGCTGGGCTTGAGAGGAGAAGCTCACGAGTGGATGAAGCCCAGCTGCAAGTTACGGCTTTAGCCACAGAGAGGAGACACAGGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488128.6
ENST00000488897.5
CDS-3UTR CAA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGTTTCCCGGCACGCCCTaGATGCCTCCGTCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: KGFLSDPDCGCLTADATVFPGTP*MPPSPF
Trigger: GAAGGGCGACGGAGGCATCAAGGGCGTGCCGGGAAA...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp GGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGCATATCCCCGAGCTGCCCTaGTCTCCCTTGGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GFLSDPDCGCLTADATVHIPELP*SPLGPG
Trigger: ACCAGGCCCCAAGGGAGACAAGGGCAGCTCGGGGAT...ATGCACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp GGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTCTCCTTTGATGCCTaGGATGCCAGGGTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GRALYQGKGFLSDPDCGCLSFDA*DARVSP
Trigger: AGGGGAGACCCTGGCATCCAAGGCATCAAAGGAGAG...GCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGACTCCAGGCTCCGCTCTaGGCTGTTGACTTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: CLTADATVHCLKQCWECRLQAPL*AVDFQG
Trigger: TCCCTGGAAGTCAACAGCCAAGAGCGGAGCCTGGAG...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTCCAGGCTCCGCTCTaGGCTGTTGACTTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLQAPL*AVDFQG
Trigger: TCCCTGGAAGTCAACAGCCAAGAGCGGAGCCTGGAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGGAGCAAGTGTGACATaGCTGTCCCGGGCACCATGG +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCGASVT*LSRAPW
Trigger: CCATGGTGCCCGGGACAGCAATGTCACACTTGCTCC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTCACCTTTCCCTCCCTaGGGGCCAGAGGGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSPFPP*GPEGAS
Trigger: ACTTGCTCCCTCTGGCCCCAAGGGAGGGAAAGGTGA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TGCCTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAACCCTTCAGGCAGTGTaGGGCACACTTCACAGGGGT +
Preference number: 5 (lower is better)
Translates to: CLTADATVHCLKQCWECRTLQAV*GTLHRG
Trigger: ACCCCTGTGAAGTGTGCCCAACACTGCCTGAAGGGT...TCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp GCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTTGAAGCCAGTCACGTaGGCTGGCAGGCTACTACTG +
Preference number: 5 (lower is better)
Translates to: AGLCTRVRDFYLTQIVGALKPVT*AGRLLL
Trigger: CAGTAGTAGCCTGCCAGCCAACGTGACTGGCTTCAA...GGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGAGAGGCCCCTTGGGGTaGCGGATCTTCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVRGPLG*RIFLMA
Trigger: TGCCATCAAGAAGATCCGCAACCCCAAGGGGCCTCT...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCAGGTGATCCAACTTaGCCTGGGAATCCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPGDPT*PGNPGG
Trigger: TCCCCCTGGATTCCCAGGCAAAGTTGGATCACCTGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTGCCTTGCTGGCCCATaGGTCCTGTTGCACCCATCT +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCCLAGP*VLLHPS
Trigger: AGATGGGTGCAACAGGACCAATGGGCCAGCAAGGCA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS GCA 90 bp ACGTTGGCTGGCAGGCTACTACTGTGTTCCAATTTGAGTCCTTCCTaGTGTGAAGGTGGGCATTGTGCACCTGTATTTGCCCCATGGCCG +
Preference number: 5 (lower is better)
Translates to: TLAGRLLLCSNLSPS*CEGGHCAPVFAPWP
Trigger: CGGCCATGGGGCAAATACAGGTGCACAATGCCCACCTTCACAGCAGGAAGGACTCAAATTGGAACACAGTAGTAGCCTGCCAGCCAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 90 bp CTTTCCAGGAAGTCCAACAAAGTTCTGGAACCCTTCAGGCAGTGTTaGGCACACTTCACAGGGGTCACCCTAGCAGAAGGGAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LSRKSNKVLEPFRQC*AHFTGVTLAEGRGS
Trigger: ACTGCCTCTCCCTTCTGCTAGGGTGACCCCTGTGAAGTGTGCCCAACACTGCCTGAAGGGTTCCAGAACTTTGTTGGACTTCCTGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529928.1
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCATCCACCTCGCTGTTTaGAGGCTCCTCCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCIHLAV*RLLQAE
Trigger: TTCTGCCTGGAGGAGCCTCAAAACAGCGAGGTGGAT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGTCTCCCTTCTGCCCTTaGGGCCCAATGACACAGATC +
Preference number: 5 (lower is better)
Translates to: QWAGLCTRVRDFYLTQIVSPFCP*GPMTQI
Trigger: GATCTGTGTCATTGGGCCCAAAGGGCAGAAGGGAGA...CACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTGCCCTTGTCTCCCTaGGGGCCTGGTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLPLSP*GPGGPP
Trigger: AGGTGGCCCACCAGGCCCCAAGGGAGACAAGGGCAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCTTGAAGCCAGTCACGTaGGCTGGCAGGCTACTACTG +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLKPVT*AGRLLL
Trigger: CAGTAGTAGCCTGCCAGCCAACGTGACTGGCTTCAA...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCAGTCGGTGGATGAGGTaGAAGCCAGTCACGTTGGCT +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCSRWMR*KPVTLA
Trigger: AGCCAACGTGACTGGCTTCAACCTCATCCACCGACT...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGGGAGCAAGTGTGACATaGCTGTCCCGGGCACCATGG +
Preference number: 5 (lower is better)
Translates to: KGFLSDPDCGCLTADATVGASVT*LSRAPW
Trigger: CCATGGTGCCCGGGACAGCAATGTCACACTTGCTCC...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACACCACGCTCTCCAGCCTaGCCCTGTTTTCCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTPRSPA*PCFPGK
Trigger: CTTGCCAGGAAAACAGGGCAAGGCTGGAGAGCGTGG...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCGAAGATGAGGTCTCCTaGAGAGGGGCAGGAGCACTC +
Preference number: 5 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTEDEVS*RGAGAL
Trigger: GAGTGCTCCTGCCCCTCTCAAGGAGACCTCATCTTC...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS TCA 90 bp GGGATCAGGGAAAGTGTCACAGAAGTGTCACCAGATGCTAGACTCTaGGGATGTCTGGGATTGGGCAGGTGGAGGAGAAAAGTGCATGCC +
Preference number: 5 (lower is better)
Translates to: GIRESVTEVSPDARL*GCLGLGRWRRKVHA
Trigger: GGCATGCACTTTTCTCCTCCACCTGCCCAATCCCAGACATCCTCAGAGTCTAGCATCTGGTGACACTTCTGTGACACTTTCCCTGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS CCA 90 bp GAGCTCAGGAGGACTTGGGGGAGTGCTGCAAGATGGTGCGAGAAATaGAGAAGGAAGACAGAACGGGGTAAGAGAGAGAAGAGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: ELRRTWGSAARWCEK*RRKTERGKREKRRE
Trigger: TTCTCTCCTCTTCTCTCTCTTACCCCGTTCTGTCTTCCTTCTCCATTTCTCGCACCATCTTGCAGCACTCCCCCAAGTCCTCCTGAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS-3UTR CAA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTAGGATGAGAGGCCCCTaGGGGTTGCGGATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTARMRGP*GLRIFL
Trigger: CAAGAAGATCCGCAACCCCAAGGGGCCTCTCATCCT...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTCCGCTCTTGGCTGTaGACTTCCAGGGATATCTGT +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLRSWL*TSRDIC
Trigger: ACAGATATCCCTGGAAGTCAACAGCCAAGAGCGGAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTATCTCAATGAGCTCATaGCTCTGGGTGTCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAISMSS*LWVSRR
Trigger: CCGCCGGGACACCCAGAGCAATGAGCTCATTGAGAT...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS GCA 90 bp CTCCCAAATGTCCTCAGGATAAAGCACTCATTCGTTGGCCGGGCATaGAAGGCCATTCATTATGTGGTCCTGATCGTTCCTTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LPNVLRIKHSFVGRA*KAIHYVVLIVPSSA
Trigger: GGCTGAGGAAGGAACGATCAGGACCACATAATGAATGGCCTTGCATGCCCGGCCAACGAATGAGTGCTTTATCCTGAGGACATTTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461217.1
CDS CCA 90 bp AAAGTGTCACAGAAGTGTCACCAGATGCTAGACTCTGAGGATGTCTaGGATTGGGCAGGTGGAGGAGAAAAGTGCATGCCAGAGGGAACC +
Preference number: 5 (lower is better)
Translates to: KVSQKCHQMLDSEDV*DWAGGGEKCMPEGT
Trigger: GGTTCCCTCTGGCATGCACTTTTCTCCTCCACCTGCCCAATCCCAGACATCCTCAGAGTCTAGCATCTGGTGACACTTCTGTGACACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS-3UTR CAA 90 bp AAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGACGCAACAGTGATCCACCTCGCTGTTTaGAGGCTCCTCCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: KGFLSDPDCGCLTADATVIHLAV*RLLQAE
Trigger: TTCTGCCTGGAGGAGCCTCAAAACAGCGAGGTGGAT...CACTGTTGCGTCAGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTAGTCGGTGGATGAGGTaGAAGCCAGTCACGTTGGCT +
Preference number: 5 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTASRWMR*KPVTLA
Trigger: AGCCAACGTGACTGGCTTCAACCTCATCCACCGACT...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp ATGAGTGTTGAATGCTACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGGTTGCGGATCTTCTaGATGGCAGACGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: MSVECYSKTVGRALYQGKGLRIF*MADVFM
Trigger: CATGAAGACGTCTGCCATCAAGAAGATCCGCAACCC...CTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGTAGCATTCAACACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp ATGAGTGTTGAATGCTACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGCTCCGCTCTTGGCTGTaGACTTCCAGGGATATCTGT +
Preference number: 5 (lower is better)
Translates to: MSVECYSKTVGRALYQGKLRSWL*TSRDIC
Trigger: ACAGATATCCCTGGAAGTCAACAGCCAAGAGCGGAG...CTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGTAGCATTCAACACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCACACTCAGCATCAGCTaGTGCCAACGCAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTTLSIS*CQRKSK
Trigger: CTTCGACTTGCGTTGGCACAAGCTGATGCTGAGTGT...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACATCAAACGAGACAGGCTaGCCCTGCTCAGCATCCAAG +
Preference number: 5 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTSNETG*PCSASK
Trigger: CTTGGATGCTGAGCAGGGCAAGCCTGTCTCGTTTGA...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCGGAGGTGCTGTTCAATaGGTAAGGATCCCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCGGAVQ*VRIPVL
Trigger: CAGAACTGGGATCCTTACCAATTGAACAGCACCTCC...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS GCA 90 bp CCGCTCTTGGCTGTTGACTTCCAGGGATATCTGTGGATACCCATTTaGATCGGTCACTTGAAACAGATACCACGTCTTCTGGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: PLLAVDFQGYLWIPI*IGHLKQIPRLLVGV
Trigger: CACACCCACCAGAAGACGTGGTATCTGTTTCAAGTGACCGATGCAAATGGGTATCCACAGATATCCCTGGAAGTCAACAGCCAAGAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS GCA 90 bp ACTCTGAGGATGTCTGGGATTGGGCAGGTGGAGGAGAAAAGTGCATaGCAGAGGGAACCTAAGAGAAGGATAAAGACTTGCAAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: TLRMSGIGQVEEKSA*QREPKRRIKTCKWA
Trigger: TGCCCACTTGCAAGTCTTTATCCTTCTCTTAGGTTCCCTCTGGCATGCACTTTTCTCCTCCACCTGCCCAATCCCAGACATCCTCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS CCA 90 bp GAGCTCCAGGCTCCGCTCTTGGCTGTTGACTTCCAGGGATATCTGTaGATACCCATTTGCATCGGTCACTTGAAACAGATACCACGTCTT +
Preference number: 5 (lower is better)
Translates to: ELQAPLLAVDFQGYL*IPICIGHLKQIPRL
Trigger: AAGACGTGGTATCTGTTTCAAGTGACCGATGCAAATGGGTATCCACAGATATCCCTGGAAGTCAACAGCCAAGAGCGGAGCCTGGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS-3UTR CAA 90 bp GCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCCTACTGTGTTCCAATTaGAGTCCTTCCTGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: AGLCTRVRDFYLTQIVGALLCSN*SPSCCE
Trigger: TTCACAGCAGGAAGGACTCAAATTGGAACACAGTAG...GGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp ACAGCTGACGCAACAGTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTGGCCTTCAGACTGTGGATaGATCTCAATGAGCTCATTG +
Preference number: 5 (lower is better)
Translates to: TADATVHCLKQCWECRAWPSDCG*ISMSSL
Trigger: CAATGAGCTCATTGAGATCAATCCACAGTCTGAAGG...CCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCACGCTCTCCAGCCTaGCCCTGTTTTCCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPRSPA*PCFPGK
Trigger: CTTGCCAGGAAAACAGGGCAAGGCTGGAGAGCGTGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACAGCTGCAACAGTGCATTGCTaGAAACAGTGCTGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: LYQGKGFLSDPDCGCLTAATVHC*KQCWEC
Trigger: GCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGC...AGCTGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTCACCGGAGTTACCTaGGGGTCCTCGCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLTGVT*GSSLSS
Trigger: AGAGGAGAGCGAGGACCCCAAGGTAACTCCGGTGAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCCCTCAAGCCAGGCTaGCCGTCCTTCCCATCCAAA +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPLKPG*PSFPSK
Trigger: TTTGGATGGGAAGGACGGCAAGCCTGGCTTGAGGGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCAGGGGGACCTGGTTaGCCACAGTCACCCTTAGGT +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPGGPG*PQSPLG
Trigger: ACCTAAGGGTGACTGTGGCAAACCAGGTCCCCCTGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCCCATGGAACCACTCTaGCCAGGTCCACCAGGCATG +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHPMEPL*PGPPGM
Trigger: CATGCCTGGTGGACCTGGCAAGAGTGGTTCCATGGG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCCAAAATGCCCTTTTTaGTTCCTGGGACTAAACGGG +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCPKCPF*FLGLNG
Trigger: CCCGTTTAGTCCCAGGAACAAAAAAGGGCATTTTGG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS CCA 90 bp ATTCTGATGGCTCCCAAATGTCCTCAGGATAAAGCACTCATTCGTTaGCCGGGCATGCAAGGCCATTCATTATGTGGTCCTGATCGTTCC +
Preference number: 5 (lower is better)
Translates to: ILMAPKCPQDKALIR*PGMQGHSLCGPDRS
Trigger: GGAACGATCAGGACCACATAATGAATGGCCTTGCATGCCCGGCCAACGAATGAGTGCTTTATCCTGAGGACATTTGGGAGCCATCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461217.1
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATACCCTTCAGGCAGTGTaGGGCACACTTCACAGGGGT +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHTLQAV*GTLHRG
Trigger: ACCCCTGTGAAGTGTGCCCAACACTGCCTGAAGGGT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATCTCTCCTTTGATGCCTaGGATGCCAGGGTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHLSFDA*DARVSP
Trigger: AGGGGAGACCCTGGCATCCAAGGCATCAAAGGAGAG...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTACTGTGTTCCAATTaGAGTCCTTCCTGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLLCSN*SPSCCE
Trigger: TTCACAGCAGGAAGGACTCAAATTGGAACACAGTAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATAGGATGAGAGGCCCCTaGGGGTTGCGGATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHRMRGP*GLRIFL
Trigger: CAAGAAGATCCGCAACCCCAAGGGGCCTCTCATCCT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATGAAGATGAGGTCTCCTaGAGAGGGGCAGGAGCACTC +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHEDEVS*RGAGAL
Trigger: GAGTGCTCCTGCCCCTCTCAAGGAGACCTCATCTTC...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTGTCCTGGCAAACCGTaGTTTCCAGGCACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHCPGKP*FPGTPC
Trigger: GCAGGGAGTGCCTGGAAACAACGGTTTGCCAGGACA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGGATCTCCCTCACTGTaGTCACCCCGGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPGSPSL*SPRASS
Trigger: CGAGGAGGCCCGGGGTGACAACAGTGAGGGAGATCC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCTCCCTTCTGCCCTTaGGGCCCAATGACACAGATC +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSPFCP*GPMTQI
Trigger: GATCTGTGTCATTGGGCCCAAAGGGCAGAAGGGAGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCAAACGAGACAGGCTaGCCCTGCTCAGCATCCAAG +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSNETG*PCSASK
Trigger: CTTGGATGCTGAGCAGGGCAAGCCTGTCTCGTTTGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAAAGCACTGGGCGCAGTaGTCGAGGCCTGGCACACCA +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPKHWAQ*SRPGTP
Trigger: TGGTGTGCCAGGCCTCGACAACTGCGCCCAGTGCTT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGGGCCTCCTCGGCTCTaGGGCGCTCCAGTGACAAAA +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPGPPRL*GAPVTK
Trigger: TTTTGTCACTGGAGCGCCCAAGAGCCGAGGAGGCCC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGAGACCTCGCTCTCCTaGAAGGCCAGGCAATCCGGG +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPETSLS*KARQSG
Trigger: CCCGGATTGCCTGGCCTTCAAGGAGAGCGAGGTCTC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATTACAGTGGCCAGCCTaGCCTGGCTGGCCCATGGGA +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPLQWPA*PGWPMG
Trigger: TCCCATGGGCCAGCCAGGCAAGGCTGGCCACTGTAA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp TTTTTGTTCCTGGGACTAAACGGGAAAAGGAGGGCAACAGGGAGCTCTGGCTGCCTGAGTCTCATTATGTaGCTTAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: FLFLGLNGKRRATGSSGCLSLIM*LRLVSN
Trigger: GTTTGAGACCAGTCTAAGCAACATAATGAGACTCAG...GCAGCCAGAGCTCCCTGTTGCCCTCCTTTTCCCGTTTAGTCCCAGGAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp ACTCCAAAACAGTGGGCCGGGCTCTGTACCAGGGTAAGGGATTTTTATCTGACCATTTGCATCGGTCACTaGAAACAGATACCACGTCTT +
Preference number: 5 (lower is better)
Translates to: TPKQWAGLCTRVRDFYLTICIGH*KQIPRL
Trigger: AAGACGTGGTATCTGTTTCAAGTGACCGATGCAAAT...GGTCAGATAAAAATCCCTTACCCTGGTACAGAGCCCGGCCCACTGTTTTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS-3UTR CAA 90 bp GCTCTGTACCAGGGTAAGGGATTTTTATCTGACCCAGATTGTGGGTGCCTGACATCTGTGGATACCCATTaGCATCGGTCACTTGAAACA +
Preference number: 5 (lower is better)
Translates to: ALYQGKGFLSDPDCGCLTSVDTH*HRSLET
Trigger: TGTTTCAAGTGACCGATGCAAATGGGTATCCACAGA...TGTCAGGCACCCACAATCTGGGTCAGATAAAAATCCCTTACCCTGGTACAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS TCA 90 bp TTGACTTCCAGGGATATCTGTGGATACCCATTTGCATCGGTCACTTaGAACAGATACCACGTCTTCTGGTGGGTGTGTTTCTTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LTSRDICGYPFASVT*NRYHVFWWVCFFSS
Trigger: ACTGCTGAAGAAACACACCCACCAGAAGACGTGGTATCTGTTTCAAGTGACCGATGCAAATGGGTATCCACAGATATCCCTGGAAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAAGAGGCCCCTTGGGGTaGCGGATCTTCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPRGPLG*RIFLMA
Trigger: TGCCATCAAGAAGATCCGCAACCCCAAGGGGCCTCT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAATCTCAATGAGCTCATaGCTCTGGGTGTCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPISMSS*LWVSRR
Trigger: CCGCCGGGACACCCAGAGCAATGAGCTCATTGAGAT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAAAAGCCTGGCTGGCCTaGAAATCCCTGGTCGCCCTT +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPKAWLA*KSLVAL
Trigger: AAGGGCGACCAGGGATTTCAAGGCCAGCCAGGCTTT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAGGGTTGCGGATCTTCTaGATGGCAGACGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPGLRIF*MADVFM
Trigger: CATGAAGACGTCTGCCATCAAGAAGATCCGCAACCC...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATTCTGTGGATACCCATTaGCATCGGTCACTTGAAACA +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHSVDTH*HRSLET
Trigger: TGTTTCAAGTGACCGATGCAAATGGGTATCCACAGA...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACACTCAGCATCAGCTaGTGCCAACGCAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPTLSIS*CQRKSK
Trigger: CTTCGACTTGCGTTGGCACAAGCTGATGCTGAGTGT...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp CCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCAACGGAGTCTTTCATATTTGCATCGGTCACTaGAAACAGATACCACGTCTT +
Preference number: 5 (lower is better)
Translates to: PVTESYKLWPFIPNGVFHICIGH*KQIPRL
Trigger: AAGACGTGGTATCTGTTTCAAGTGACCGATGCAAAT...ATGAAAGACTCCGTTGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCATCCCCTTTTTCACCTTaGGTACCAGGCAATCCTCTT +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPSPFSP*VPGNPL
Trigger: AAGAGGATTGCCTGGTACCAAAGGTGAAAAAGGGGA...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS-3UTR CAA 90 bp AAAAACATTCACAACCTGTCACAGAGTCCTATAAGCTTTGGCCATTTATTCCCACCTTCAGACTGTGGATaGATCTCAATGAGCTCATTG +
Preference number: 5 (lower is better)
Translates to: KNIHNLSQSPISFGHLFPPSDCG*ISMSSL
Trigger: CAATGAGCTCATTGAGATCAATCCACAGTCTGAAGG...TGGGAATAAATGGCCAAAGCTTATAGGACTCTGTGACAGGTTGTGAATGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS GCA 72 bp CGAGCTCTCCCGGCTGTCTGCTGCCCGGCGCACGCCTaGCGGGGACTGCCGGCCACTCCGGGTGGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: RALPAVCCPAHA*RGLPATPGGGR
Trigger: TCTTCCCCCACCCGGAGTGGCCGGCAGTCCCCGGCAGGCGTGCGCCGGGCAGCAGACAGCCGGGAGAGCTCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000532877.1
CDS GCA 72 bp CAGCTTCCTGGCGCTCGAGCTCTCCCGGCTGTCTGCTaGCCGGCGCACGCCTGCCGGGGACTGCCGGCCACT +
Preference number: 6 (lower is better)
Translates to: QLPGARALPAVC*PAHACRGLPAT
Trigger: AGTGGCCGGCAGTCCCCGGCAGGCGTGCGCCGGGCAGCAGACAGCCGGGAGAGCTCGAGCGCCAGGAAGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000532877.1
CDS CCA 72 bp GCTGGGGGCCTGCCAGGGACACTAATGGAACACAGCTaGACCGGCCCGCCAGGGAGGAGGAGGAGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: AGGLPGTLMEHS*TGPPGRRRRRA
Trigger: GGCCCTCCTCCTCCTCCTCCCTGGCGGGCCGGTCCAGCTGTGTTCCATTAGTGTCCCTGGCAGGCCCCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS CCA 72 bp GGTGGCCCAACGTGTCCCGGGGGACCGGGTCTTCCCTaGGGTCCCATGGCACCAGGTTCACCCTCTGCGCCA +
Preference number: 6 (lower is better)
Translates to: GGPTCPGGPGLP*GPMAPGSPSAP
Trigger: TGGCGCAGAGGGTGAACCTGGTGCCATGGGACCCCAGGGAAGACCCGGTCCCCCGGGACACGTTGGGCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000440437.1
ENST00000488128.6
ENST00000488897.5
CDS CCA 72 bp TGGAGCACCTGGCCTGCCCGGAGCACCATCCTTCCCTaGAGGCCCTGGTCGTCCCGGAGCTGCCGCCATCTC +
Preference number: 6 (lower is better)
Translates to: WSTWPARSTILP*RPWSSRSCRHL
Trigger: GAGATGGCGGCAGCTCCGGGACGACCAGGGCCTCCAGGGAAGGATGGTGCTCCGGGCAGGCCAGGTGCTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS CCA 72 bp CTTGCTGCCCATCACGGCCCGGAGGCCCAGAGACACTaGCCCCAGGAGGTCCCACAGGTCCGGTGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: LAAHHGPEAQRH*PQEVPQVRWLL
Trigger: AAGGAGCCACCGGACCTGTGGGACCTCCTGGGGCCAGTGTCTCTGGGCCTCCGGGCCGTGATGGGCAGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000458715.5
CDS CAA 72 bp GGGCCCGGTGGCCCAACAGGCCCCATGGAACCACTCTaGCCAGGTCCACCAGGCATGCCGGCTCTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: GPGGPTGPMEPL*PGPPGMPALPF
Trigger: GAAGGGGAGAGCCGGCATGCCTGGTGGACCTGGCAAGAGTGGTTCCATGGGGCCTGTTGGGCCACCGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS CAA 90 bp TCTCCTGCAGGGCCCGGTGGCCCAACAGGCCCCATGGAACCACTCTaGCCAGGTCCACCAGGCATGCCGGCTCTCCCCTTCTCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: SPAGPGGPTGPMEPL*PGPPGMPALPFSPA
Trigger: GGCAGGAGAGAAGGGGAGAGCCGGCATGCCTGGTGGACCTGGCAAGAGTGGTTCCATGGGGCCTGTTGGGCCACCGGGCCCTGCAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS TCA 72 bp GGGCCAGGCAAGGCCACCACACGGACATCCCCATCCTaGAGGTTGGACAGGGCTGGGCACGGCTCACAGGGC +
Preference number: 6 (lower is better)
Translates to: GPGKATTRTSPS*RLDRAGHGSQG
Trigger: GCCCTGTGAGCCGTGCCCAGCCCTGTCCAACCTTCAGGATGGGGATGTCCGTGTGGTGGCCTTGCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000474000.5
ENST00000482478.5
ENST00000529928.1
CDS GCA 72 bp GGCCCGGTGGCCCAACAGGCCCCATGGAACCACTCTTaGCAGGTCCACCAGGCATGCCGGCTCTCCCCTTCT +
Preference number: 6 (lower is better)
Translates to: GPVAQQAPWNHS*QVHQACRLSPS
Trigger: AGAAGGGGAGAGCCGGCATGCCTGGTGGACCTGGCAAGAGTGGTTCCATGGGGCCTGTTGGGCCACCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS TCA 72 bp GTCACCCCGGGCCTCCTCGGCTCTTGGGCGCTCCAGTaGCAAAAAGCACTGGGCGCAGTTGTCGAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: VTPGLLGSWALQ*QKALGAVVEAW
Trigger: CCAGGCCTCGACAACTGCGCCCAGTGCTTTTTGTCACTGGAGCGCCCAAGAGCCGAGGAGGCCCGGGGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000458715.5
ENST00000468459.5
ENST00000479100.1
CDS GCA 72 bp CTCCAGGCTCTCCTGACAGTCCTGGCCGCCCTGTGGTaGCCGGCGTTCCAGGGTCTCCAGGATTCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: LQALLTVLAALW*PAFQGLQDSQH
Trigger: ATGCTGGGAATCCTGGAGACCCTGGAACGCCGGGCACCACAGGGCGGCCAGGACTGTCAGGAGAGCCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000474000.5
ENST00000482478.5
CDS GCA 72 bp CTGCTTGAGGGCCAGGTGGGCCAGGTGATCCAACTTTaGCTGGGAATCCAGGGGGACCCGGTGGGCCCGGAA +
Preference number: 6 (lower is better)
Translates to: LLEGQVGQVIQL*LGIQGDPVGPE
Trigger: TTCCGGGCCCACCGGGTCCCCCTGGATTCCCAGGCAAAGTTGGATCACCTGGCCCACCTGGCCCTCAAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000440437.1
ENST00000470799.5
ENST00000488128.6
CDS CCA 72 bp GTCATTGCCCCGTGCTCCCTTCTCTCCCTTGGAGCCTaGTGGACCAGGCAGGCCCCGCTCACCTTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: VIAPCSLLSLGA*WTRQAPLTFPS
Trigger: GGAGGGAAAGGTGAGCGGGGCCTGCCTGGTCCACCAGGCTCCAAGGGAGAGAAGGGAGCACGGGGCAATGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373667.4
ENST00000373668.7
ENST00000373672.8
CDS CCA 72 bp CAGAGACACTGGCCCCAGGAGGTCCCACAGGTCCGGTaGCTCCTTTCACCCCTGGAGATCCCTGGGCACCCT +
Preference number: 6 (lower is better)
Translates to: QRHWPQEVPQVR*LLSPLEIPGHP
Trigger: AGGGTGCCCAGGGATCTCCAGGGGTGAAAGGAGCCACCGGACCTGTGGGACCTCCTGGGGCCAGTGTCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000458715.5
CDS GCA 72 bp TCACCTGGTGTTCCTCTGAGTCCCGTCTGTCCTTGCTaGCCATCACGGCCCGGAGGCCCAGAGACACTGGCC +
Preference number: 6 (lower is better)
Translates to: SPGVPLSPVCPC*PSRPGGPETLA
Trigger: GGCCAGTGTCTCTGGGCCTCCGGGCCGTGATGGGCAGCAAGGACAGACGGGACTCAGAGGAACACCAGGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000458715.5
CDS CCA 72 bp ATTGCCCCGTGCTCCCTTCTCTCCCTTGGAGCCTGGTaGACCAGGCAGGCCCCGCTCACCTTTCCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: IAPCSLLSLGAW*TRQAPLTFPSL
Trigger: AAGGGAGGGAAAGGTGAGCGGGGCCTGCCTGGTCCACCAGGCTCCAAGGGAGAGAAGGGAGCACGGGGCAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 72 bp GCTGGCCTGGGAGGCCTGCAAGGCCCCTTTCTCCGGTaGCTCCTCGGTCTCCTTTCAGACCCACTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: AGLGGLQGPFLR*LLGLLSDPLQR
Trigger: TCTCTGCAGTGGGTCTGAAAGGAGACCGAGGAGCCACCGGAGAAAGGGGCCTTGCAGGCCTCCCAGGCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000440437.1
ENST00000488128.6
ENST00000488897.5
CDS TCA 72 bp GGTGGACCCGGCATGCCAGAGAAGATGAGGTCTCCTTaGGAGGGGCAGGAGCACTCCCCTGGCTCACCCTTC +
Preference number: 6 (lower is better)
Translates to: GGPGMPEKMRSP*EGQEHSPGSPF
Trigger: GAAGGGTGAGCCAGGGGAGTGCTCCTGCCCCTCTCAAGGAGACCTCATCTTCTCTGGCATGCCGGGTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000458715.5
CDS TCA 72 bp GGAGCACCCGGCATGCCAGAGAAGATGAGGTCTCCTTaGGAGGGGCAGGAGCACTCCCCTGGCTCACCCTTC +
Preference number: 6 (lower is better)
Translates to: GAPGMPEKMRSP*EGQEHSPGSPF
Trigger: GAAGGGTGAGCCAGGGGAGTGCTCCTGCCCCTCTCAAGGAGACCTCATCTTCTCTGGCATGCCGGGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS TCA 72 bp GGGCAGGGCCGCACGACACCCAGAAACCCAACTGGCTaGTATCACATGCCCCGCCTTGGAGCAGACTGGGAC +
Preference number: 6 (lower is better)
Translates to: GQGRTTPRNPTG*YHMPRLGADWD
Trigger: GTCCCAGTCTGCTCCAAGGCGGGGCATGTGATATCAGCCAGTTGGGTTTCTGGGTGTCGTGCGGCCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS GCA 72 bp GCCAACGCAAGTCGAAGAGCTGGGGCACTGGGAAGATaGAGGACACAAAGTCGCCATCCTGGCCCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: ANASRRAGALGR*RTQSRHPGPGP
Trigger: GGGCCCAGGGCCAGGATGGCGACTTTGTGTCCTGCATCTTCCCAGTGCCCCAGCTCTTCGACTTGCGTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS GCA 72 bp AGGCACCCTAGAGTCTCCTGGAAAGCCCTGGGAGGTTaGCATGGAGACCGGAGGTGGCACTCTAGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: RHPRVSWKALGG*HGDRRWHSSPA
Trigger: GGCTGGGCTAGAGTGCCACCTCCGGTCTCCATGGCAACCTCCCAGGGCTTTCCAGGAGACTCTAGGGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482478.5
CDS CCA 72 bp CGCTCACCTTTCCCTCCATTGCTGTCCCGGGCACCATaGACACAGGGCGGACACTCATCGGCTGCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: RSPFPPLLSRAP*TQGGHSSAAVS
Trigger: GGAGACAGCAGCCGATGAGTGTCCGCCCTGTGTCCATGGTGCCCGGGACAGCAATGGAGGGAAAGGTGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373667.4
CDS CCA 72 bp ATTGCCCCGTGCTCCCTTCTCTCCCTTGGAGCCTGGTaGACCAGGCAGGCCCCGCTCACCTTTCCCTCCATT +
Preference number: 6 (lower is better)
Translates to: IAPCSLLSLGAW*TRQAPLTFPSI
Trigger: AATGGAGGGAAAGGTGAGCGGGGCCTGCCTGGTCCACCAGGCTCCAAGGGAGAGAAGGGAGCACGGGGCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373667.4
CDS CCA 72 bp GGGCCCAGGGATGCCAGGGATGCCTTGCTGGCCCATTaGTCCTGTTGCACCCATCTTGCCATAGCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GPRDARDALLAH*SCCTHLAIAWR
Trigger: CCTCCAGGCTATGGCAAGATGGGTGCAACAGGACCAATGGGCCAGCAAGGCATCCCTGGCATCCCTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373672.8
ENST00000488128.6
ENST00000488897.5
CDS CCA 72 bp CAGCAGGGCTTTGCCCCACCCATGGAGACCAGGCCCTaGGTCAAGGGTCCTGGTGACTGCTGGAAACAGGAC +
Preference number: 6 (lower is better)
Translates to: QQGFAPPMETRP*VKGPGDCWKQD
Trigger: GTCCTGTTTCCAGCAGTCACCAGGACCCTTGACCCAGGGCCTGGTCTCCATGGGTGGGGCAAAGCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS CAA 72 bp CTCCCTCACTGTTGTCACCCCGGGCCTCCTCGGCTCTaGGGCGCTCCAGTGACAAAAAGCACTGGGCGCAGT +
Preference number: 6 (lower is better)
Translates to: LPHCCHPGPPRL*GAPVTKSTGRS
Trigger: ACTGCGCCCAGTGCTTTTTGTCACTGGAGCGCCCAAGAGCCGAGGAGGCCCGGGGTGACAACAGTGAGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000458715.5
ENST00000468459.5
ENST00000479100.1
CDS CAA 72 bp TTGAAATCCCTGGTCGCCCTTCTCACCGGAGTTACCTaGGGGTCCTCGCTCTCCTCTGGGACCCGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LKSLVALLTGVT*GSSLSSGTRWA
Trigger: GGCCCAGCGGGTCCCAGAGGAGAGCGAGGACCCCAAGGTAACTCCGGTGAGAAGGGCGACCAGGGATTTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373672.8
ENST00000440437.1
ENST00000470799.5
ENST00000482910.1
ENST00000488128.6
CDS CAA 90 bp TCAGGCCTGCCCCTCCCGATGAGACCACATCAGACAGAGCTGGCTTaGTGTCTTCTTCACTCACCGGTGGGCCCGGAAAGCCTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: SGLPLPMRPHQTELA*CLLHSPVGPESLAG
Trigger: GCCAGCCAGGCTTTCCGGGCCCACCGGTGAGTGAAGAAGACACAAAGCCAGCTCTGTCTGATGTGGTCTCATCGGGAGGGGCAGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482910.1
CDS TCA 72 bp CGGGAATACCTGGTGGACCCGGCATGCCAGAGAAGATaGGGTCTCCTTGAGAGGGGCAGGAGCACTCCCCTG +
Preference number: 6 (lower is better)
Translates to: REYLVDPACQRR*GLLERGRSTPL
Trigger: CAGGGGAGTGCTCCTGCCCCTCTCAAGGAGACCTCATCTTCTCTGGCATGCCGGGTCCACCAGGTATTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000458715.5
CDS TCA 72 bp TCCAAAGTCCCGGAGCACCCGGCATGCCAGAGAAGATaGGGTCTCCTTGAGAGGGGCAGGAGCACTCCCCTG +
Preference number: 6 (lower is better)
Translates to: SKVPEHPACQRR*GLLERGRSTPL
Trigger: CAGGGGAGTGCTCCTGCCCCTCTCAAGGAGACCTCATCTTCTCTGGCATGCCGGGTGCTCCGGGACTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373672.8
CDS GCA 72 bp CCCACATCTCCACTGGCCCCTGTGGAGGACACAAGATaGTGGGCCCCTACAACCGAGCTGCAGGACAAGCAG +
Preference number: 6 (lower is better)
Translates to: PTSPLAPVEDTR*WAPTTELQDKQ
Trigger: CTGCTTGTCCTGCAGCTCGGTTGTAGGGGCCCAGCATCTTGTGTCCTCCACAGGGGCCAGTGGAGATGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373667.4
ENST00000373668.7
ENST00000373672.8
ENST00000474000.5
ENST00000482478.5
ENST00000529928.1
CDS CCA 72 bp ACATCTCCACTGGCCCCTGTGGAGGACACAAGATGCTaGGCCCCTACAACCGAGCTGCAGGACAAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: TSPLAPVEDTRC*APTTELQDKQG
Trigger: GCCCTGCTTGTCCTGCAGCTCGGTTGTAGGGGCCCAGCATCTTGTGTCCTCCACAGGGGCCAGTGGAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373667.4
ENST00000373668.7
ENST00000373672.8
ENST00000474000.5
ENST00000482478.5
ENST00000529928.1
CDS CCA 72 bp GGCTTGCCCTGCTCAGCATCCAAGCCTAGAAATACATaGCCCACAGGCCTCATGGGTCGTCGGGGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: GLPCSASKPRNT*PTGLMGRRGPR
Trigger: TCTGGGGCCCCGACGACCCATGAGGCCTGTGGGCCATGTATTTCTAGGCTTGGATGCTGAGCAGGGCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 72 bp GAGGGAGCAAGTGTGACATTGCTGTCCCGGGCACCATaGACACAGGGCGGACACTCATCGGCTGCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: EGASVTLLSRAP*TQGGHSSAAVS
Trigger: GGAGACAGCAGCCGATGAGTGTCCGCCCTGTGTCCATGGTGCCCGGGACAGCAATGTCACACTTGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 72 bp GAGGCCCTGGTCGTCCCGGAGCTGCCGCCATCTCCATaGGGAACTGCATCCTGGAGGTGTAGTAAGCCATTC +
Preference number: 6 (lower is better)
Translates to: EALVVPELPPSP*GTASWRCSKPF
Trigger: GAATGGCTTACTACACCTCCAGGATGCAGTTCCCCATGGAGATGGCGGCAGCTCCGGGACGACCAGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS CCA 72 bp ACGGAAAAGGCGCAGGAAGGGCTGCCTTTAAATCCCTaGGTGCCTCTGGACAGCCCTGCCAAGCAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: TEKAQEGLPLNP*VPLDSPAKQQG
Trigger: GCCCTGCTGCTTGGCAGGGCTGTCCAGAGGCACCCAGGGATTTAAAGGCAGCCCTTCCTGCGCCTTTTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CCA 72 bp AGAGGGGCAGGGCCGCACGACACCCAGAAACCCAACTaGCTGATATCACATGCCCCGCCTTGGAGCAGACTG +
Preference number: 6 (lower is better)
Translates to: RGAGPHDTQKPN*LISHAPPWSRL
Trigger: CAGTCTGCTCCAAGGCGGGGCATGTGATATCAGCCAGTTGGGTTTCTGGGTGTCGTGCGGCCCTGCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CAA 90 bp TCTGACAGCTCCCAGGTGCTCAGTAAGGGTGGGCTCCAGCCCAGCTaGCCCAAAAGGCACCCTAGAGTCTCCTGGAAAGCCCTGGGAGGT +
Preference number: 6 (lower is better)
Translates to: SDSSQVLSKGGLQPS*PKRHPRVSWKALGG
Trigger: ACCTCCCAGGGCTTTCCAGGAGACTCTAGGGTGCCTTTTGGGCAAGCTGGGCTGGAGCCCACCCTTACTGAGCACCTGGGAGCTGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482478.5
CDS TCA 72 bp GATCTGCTCAGGCTTCCCTGCTCTTGCCCGAGCTACTaGACCAGCCTCCTAACTCGTCCTGCCACCTCCTGG +
Preference number: 6 (lower is better)
Translates to: DLLRLPCSCPSY*TSLLTRPATSW
Trigger: CCAGGAGGTGGCAGGACGAGTTAGGAGGCTGGTTCAGTAGCTCGGGCAAGAGCAGGGAAGCCTGAGCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470799.5
CDS GCA 72 bp GAGGCCACACGTCCAGCCACACTCAGCATCAGCTTGTaGCAACGCAAGTCGAAGAGCTGGGGCACTGGGAAG +
Preference number: 6 (lower is better)
Translates to: EATRPATLSISL*QRKSKSWGTGK
Trigger: CTTCCCAGTGCCCCAGCTCTTCGACTTGCGTTGGCACAAGCTGATGCTGAGTGTGGCTGGACGTGTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS GCA 72 bp TTTTCACCTGGTGTTCCTCTGAGTCCCGTCTGTCCTTaGTGCCCATCACGGCCCGGAGGCCCAGAGACACTG +
Preference number: 6 (lower is better)
Translates to: FSPGVPLSPVCP*CPSRPGGPETL
Trigger: CAGTGTCTCTGGGCCTCCGGGCCGTGATGGGCAGCAAGGACAGACGGGACTCAGAGGAACACCAGGTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000458715.5
CDS GCA 72 bp ATGGAGACCAGGCCCTGGGTCAAGGGTCCTGGTGACTaGTGGAAACAGGACAGCTGGCTTCTGGGCCCAATC +
Preference number: 6 (lower is better)
Translates to: METRPWVKGPGD*WKQDSWLLGPI
Trigger: GATTGGGCCCAGAAGCCAGCTGTCCTGTTTCCAGCAGTCACCAGGACCCTTGACCCAGGGCCTGGTCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS CCA 72 bp GTGCATTGCTTGAAACAGTGCTGGGAGTGCAGAGCCTaGCCTAGAGGCTCAGTGGGCCCTCCTTGCCACCCT +
Preference number: 6 (lower is better)
Translates to: VHCLKQCWECRA*PRGSVGPPCHP
Trigger: AGGGTGGCAAGGAGGGCCCACTGAGCCTCTAGGCCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS CCA 72 bp GACAAGCAGGGCTCCCCCTTCTCTCCTTTGATGCCTTaGATGCCAGGGTCTCCAGTAAGGGTGGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: DKQGSPFSPLMP*MPGSPVRVGSS
Trigger: GCTGGAGCCCACCCTTACTGGAGACCCTGGCATCCAAGGCATCAAAGGAGAGAAGGGGGAGCCCTGCTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474000.5
CDS CCA 72 bp GGCTCAGGGAGCTCAGGAGCGGGGAGCAGTTCCCTCTaGCTGGGGATCAGGGAAAGTGTCACAGAAGTGTCA +
Preference number: 6 (lower is better)
Translates to: GSGSSGAGSSSL*LGIRESVTEVS
Trigger: TGACACTTCTGTGACACTTTCCCTGATCCCCAGCCAGAGGGAACTGCTCCCCGCTCCTGAGCTCCCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS CCA 72 bp CAGCTCCTGGATCACCCTGAGGCCAGGACAAGGGCCTaGAATGTGAGCAGGAGCAAGGGAGTGCTCGGGAAA +
Preference number: 6 (lower is better)
Translates to: QLLDHPEARTRA*NVSRSKGVLGK
Trigger: TTTCCCGAGCACTCCCTTGCTCCTGCTCACATTCCAGGCCCTTGTCCTGGCCTCAGGGTGATCCAGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488128.6
ENST00000488897.5
CDS CAA 72 bp GGACAAGCAGGGCTCCCCCTTCTCTCCTTTGATGCCTaGGATGCCAGGGTCTCCCCTGGCTGGTACAGGATC +
Preference number: 6 (lower is better)
Translates to: GQAGLPLLSFDA*DARVSPGWYRI
Trigger: GATCCTGTACCAGCCAGGGGAGACCCTGGCATCCAAGGCATCAAAGGAGAGAAGGGGGAGCCCTGCTTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373667.4
ENST00000373668.7
ENST00000373672.8
ENST00000529928.1
CDS CAA 90 bp TCCACGTGCACAGAGGCCACACGTCCAGCCACACTCAGCATCAGCTaGTGCCAACGCAAGTCGAAGAGCTGGGGCACTGGGAAGATGCAG +
Preference number: 6 (lower is better)
Translates to: STCTEATRPATLSIS*CQRKSKSWGTGKMQ
Trigger: CTGCATCTTCCCAGTGCCCCAGCTCTTCGACTTGCGTTGGCACAAGCTGATGCTGAGTGTGGCTGGACGTGTGGCCTCTGTGCACGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS GCA 72 bp GATGCCAGGGATGCCTTGCTGGCCCATTGGTCCTGTTaGACCCATCTTGCCATAGCCTGGAGGACCTTGAGG +
Preference number: 6 (lower is better)
Translates to: DARDALLAHWSC*THLAIAWRTLR
Trigger: CCTCAAGGTCCTCCAGGCTATGGCAAGATGGGTGCAACAGGACCAATGGGCCAGCAAGGCATCCCTGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373672.8
ENST00000488128.6
ENST00000488897.5
CDS GCA 72 bp TTGCCCGAGCTACTGAACCAGCCTCCTAACTCGTCCTaGCACCTCCTGGCTCACTGCAAGCCAGCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: LPELLNQPPNSS*HLLAHCKPASK
Trigger: TTTGCTGGCTGGCTTGCAGTGAGCCAGGAGGTGGCAGGACGAGTTAGGAGGCTGGTTCAGTAGCTCGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470799.5
CDS GCA 72 bp GCACGACACCCAGAAACCCAACTGGCTGATATCACATaGCCCGCCTTGGAGCAGACTGGGACTGGAGCCAAG +
Preference number: 6 (lower is better)
Translates to: ARHPETQLADIT*PALEQTGTGAK
Trigger: CTTGGCTCCAGTCCCAGTCTGCTCCAAGGCGGGGCATGTGATATCAGCCAGTTGGGTTTCTGGGTGTCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CCA 72 bp GACAAGCAGGGCTCCCCCTTCTCTCCTTTGATGCCTTaGATGCCAGGGTCTCCCCTGGCTGGTACAGGATCA +
Preference number: 6 (lower is better)
Translates to: DKQGSPFSPLMP*MPGSPLAGTGS
Trigger: TGATCCTGTACCAGCCAGGGGAGACCCTGGCATCCAAGGCATCAAAGGAGAGAAGGGGGAGCCCTGCTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373667.4
ENST00000373668.7
ENST00000373672.8
ENST00000529928.1
CDS CCA 72 bp CAGCTTGTGCCAACGCAAGTCGAAGAGCTGGGGCACTaGGAAGATGCAGGACACAAAGTCGCCATCCTGGCC +
Preference number: 6 (lower is better)
Translates to: QLVPTQVEELGH*EDAGHKVAILA
Trigger: GGCCAGGATGGCGACTTTGTGTCCTGCATCTTCCCAGTGCCCCAGCTCTTCGACTTGCGTTGGCACAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 72 bp TGCCCAAAAGGCACCCTAGAGTCTCCTGGAAAGCCCTaGGAGGTTGCCATGGAGACCGGAGGTGGCACTCTA +
Preference number: 6 (lower is better)
Translates to: CPKGTLESPGKP*EVAMETGGGTL
Trigger: TAGAGTGCCACCTCCGGTCTCCATGGCAACCTCCCAGGGCTTTCCAGGAGACTCTAGGGTGCCTTTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482478.5
CDS CCA 72 bp CTGCAATGTGAAGCCCTAAAGCTTTGGCATCTCTGCTaGGCTCTGAGCCAGGTGCCTGGCAGGGCCCCAAGA +
Preference number: 6 (lower is better)
Translates to: LQCEALKLWHLC*ALSQVPGRAPR
Trigger: TCTTGGGGCCCTGCCAGGCACCTGGCTCAGAGCCCAGCAGAGATGCCAAAGCTTTAGGGCTTCACATTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CAA 72 bp CGCAGGATGAGAGGCCCCTTGGGGTTGCGGATCTTCTaGATGGCAGACGTCTTCATGAGGCTGAGTCGGTGG +
Preference number: 6 (lower is better)
Translates to: RRMRGPLGLRIF*MADVFMRLSRW
Trigger: CCACCGACTCAGCCTCATGAAGACGTCTGCCATCAAGAAGATCCGCAACCCCAAGGGGCCTCTCATCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000532877.1
CDS CAA 72 bp TTTTTCACCTGGTGTTCCTCTGAGTCCCGTCTGTCCTaGCTGCCCATCACGGCCCGGAGGCCCAGAGACACT +
Preference number: 6 (lower is better)
Translates to: FFTWCSSESRLS*LPITARRPRDT
Trigger: AGTGTCTCTGGGCCTCCGGGCCGTGATGGGCAGCAAGGACAGACGGGACTCAGAGGAACACCAGGTGAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000458715.5
CDS CAA 72 bp CCCCTCCCGATGAGACCACATCAGACAGAGCTGGCTTaGTGTCTTCTTCACTCACCGGTGGGCCCGGAAAGC +
Preference number: 6 (lower is better)
Translates to: PLPMRPHQTELA*CLLHSPVGPES
Trigger: GCTTTCCGGGCCCACCGGTGAGTGAAGAAGACACAAAGCCAGCTCTGTCTGATGTGGTCTCATCGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482910.1
CDS CAA 90 bp GCACGACACCCAGAAACCCAACTGGCTGATATCACATGCCCCGCCTaGGAGCAGACTGGGACTGGAGCCAAGGAAGAGGAAGCGAAGAGG +
Preference number: 6 (lower is better)
Translates to: ARHPETQLADITCPA*EQTGTGAKEEEAKR
Trigger: CCTCTTCGCTTCCTCTTCCTTGGCTCCAGTCCCAGTCTGCTCCAAGGCGGGGCATGTGATATCAGCCAGTTGGGTTTCTGGGTGTCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS TCA 72 bp GGACCTCAGAGAACCCGTGTCGTTAGCTACCGTGCCTaGAGGGGGACAACAAACACGGAGGACGGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: GPQRTRVVSYRA*RGTTNTEDGGE
Trigger: TTCACCTCCGTCCTCCGTGTTTGTTGTCCCCCTTCAGGCACGGTAGCTAACGACACGGGTTCTCTGAGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS GCA 72 bp ACGGAAAGGAGTCAGAGACTGGGAGGATGTCCAAGCTaGCGGGACCTCAGAGAACCCGTGTCGTTAGCTACC +
Preference number: 6 (lower is better)
Translates to: TERSQRLGGCPS*RDLREPVSLAT
Trigger: GGTAGCTAACGACACGGGTTCTCTGAGGTCCCGGCAGCTTGGACATCCTCCCAGTCTCTGACTCCTTTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS GCA 72 bp GGCAGGCTACTACTGTGTTCCAATTTGAGTCCTTCCTaGTGTGAAGGTGGGCATTGTGCACCGGTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: GRLLLCSNLSPS*CEGGHCAPVAG
Trigger: CCCGGCCACCGGTGCACAATGCCCACCTTCACAGCAGGAAGGACTCAAATTGGAACACAGTAGTAGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532877.1
CDS CCA 72 bp TGTGAAGGTGGGCATTGTGCACCTGTATTTGCCCCATaGCCGAAGGTAGCCCAAAGACCGAGCAGCCACAGG +
Preference number: 6 (lower is better)
Translates to: CEGGHCAPVFAP*PKVAQRPSSHR
Trigger: CCTGTGGCTGCTCGGTCTTTGGGCTACCTTCGGCCATGGGGCAAATACAGGTGCACAATGCCCACCTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CAA 72 bp CCCTGGGCCCTGAGCTCCAGGCTCCGCTCTTGGCTGTaGACTTCCAGGGATATCTGTGGATACCCATTTGCA +
Preference number: 6 (lower is better)
Translates to: PWALSSRLRSWL*TSRDICGYPFA
Trigger: TGCAAATGGGTATCCACAGATATCCCTGGAAGTCAACAGCCAAGAGCGGAGCCTGGAGCTCAGGGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS GCA 72 bp CTGACAGCTGACGCAACAGTGCATTGCTTGAAACAGTaGTGGGAGTGCAGAGCCTGGCCTAGAGGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: LTADATVHCLKQ*WECRAWPRGSV
Trigger: CACTGAGCCTCTAGGCCAGGCTCTGCACTCCCAGCACTGTTTCAAGCAATGCACTGTTGCGTCAGCTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373668.7
CDS CCA 72 bp CTCAGCATCAGCTTGTGCCAACGCAAGTCGAAGAGCTaGGGCACTGGGAAGATGCAGGACACAAAGTCGCCA +
Preference number: 6 (lower is better)
Translates to: LSISLCQRKSKS*GTGKMQDTKSP
Trigger: TGGCGACTTTGTGTCCTGCATCTTCCCAGTGCCCCAGCTCTTCGACTTGCGTTGGCACAAGCTGATGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 72 bp TGGTTTTCATGGGTGGGTACTGCTGCTCCATCGGCATaGCCCCAAAGCAGTCAGAGGGATTACAGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: WFSWVGTAAPSA*PQSSQRDYSGQ
Trigger: CTGGCCACTGTAATCCCTCTGACTGCTTTGGGGCCATGCCGATGGAGCAGCAGTACCCACCCATGAAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373672.8
ENST00000488128.6
ENST00000488897.5
CDS CCA 72 bp GACAAGCAGGGCTCCCCCTTCTCTCCTTTGATGCCTTaGATGCCAGGGTCTCCCTTTTTGTCTGACAGCTCC +
Preference number: 6 (lower is better)
Translates to: DKQGSPFSPLMP*MPGSPFLSDSS
Trigger: GGAGCTGTCAGACAAAAAGGGAGACCCTGGCATCCAAGGCATCAAAGGAGAGAAGGGGGAGCCCTGCTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482478.5
CDS CCA 72 bp CAGAAACCCAACTGGCTGATATCACATGCCCCGCCTTaGAGCAGACTGGGACTGGAGCCAAGGAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: QKPNWLISHAPP*SRLGLEPRKRK
Trigger: CTTCCTCTTCCTTGGCTCCAGTCCCAGTCTGCTCCAAGGCGGGGCATGTGATATCAGCCAGTTGGGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CAA 72 bp CCAGAAACCCAACTGGCTGATATCACATGCCCCGCCTaGGAGCAGACTGGGACTGGAGCCAAGGAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: PETQLADITCPA*EQTGTGAKEEE
Trigger: TTCCTCTTCCTTGGCTCCAGTCCCAGTCTGCTCCAAGGCGGGGCATGTGATATCAGCCAGTTGGGTTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CAA 90 bp GCTTTCCAGGAAGTCCAACAAAGTTCTGGAACCCTTCAGGCAGTGTaGGGCACACTTCACAGGGGTCACCCTAGCAGAAGGGAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: AFQEVQQSSGTLQAV*GTLHRGHPSRRERQ
Trigger: CTGCCTCTCCCTTCTGCTAGGGTGACCCCTGTGAAGTGTGCCCAACACTGCCTGAAGGGTTCCAGAACTTTGTTGGACTTCCTGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529928.1
CDS TCA 72 bp CAGGGGCTGGCATGGCAGGGGCTCAGTAGCATGTGCTaGACTGAAAGCACAGCTTCAATCCACTGTGAAAGC +
Preference number: 6 (lower is better)
Translates to: QGLAWQGLSSMC*TESTASIHCES
Trigger: GCTTTCACAGTGGATTGAAGCTGTGCTTTCAGTTCAGCACATGCTACTGAGCCCCTGCCATGCCAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS GCA 72 bp ACCTCCTGGCTCACTGCAAGCCAGCCAGCAAATGGCTaGCCTCTTCTCCTCCAGCATAGCTCTGATTATGTC +
Preference number: 6 (lower is better)
Translates to: TSWLTASQPANG*PLLLQHSSDYV
Trigger: GACATAATCAGAGCTATGCTGGAGGAGAAGAGGGCAGCCATTTGCTGGCTGGCTTGCAGTGAGCCAGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470799.5
CDS CCA 72 bp TTCTTGATGGCAGACGTCTTCATGAGGCTGAGTCGGTaGATGAGGTTGAAGCCAGTCACGTTGGCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: FLMADVFMRLSR*MRLKPVTLAGR
Trigger: CCTGCCAGCCAACGTGACTGGCTTCAACCTCATCCACCGACTCAGCCTCATGAAGACGTCTGCCATCAAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000532877.1
CDS GCA 72 bp TTCCTGTGTCTCCTCTCTGTGGCTAAAGCCGTAACTTaGAGCTGGGCTTCATCCACTCGTGAGCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: FLCLLSVAKAVT*SWASSTRELLL
Trigger: GAGGAGAAGCTCACGAGTGGATGAAGCCCAGCTGCAAGTTACGGCTTTAGCCACAGAGAGGAGACACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488128.6
ENST00000488897.5
CDS CCA 72 bp TGTCTCCTCTCTGTGGCTAAAGCCGTAACTTGCAGCTaGGCTTCATCCACTCGTGAGCTTCTCCTCTCAAGC +
Preference number: 6 (lower is better)
Translates to: CLLSVAKAVTCS*ASSTRELLLSS
Trigger: GCTTGAGAGGAGAAGCTCACGAGTGGATGAAGCCCAGCTGCAAGTTACGGCTTTAGCCACAGAGAGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488128.6
ENST00000488897.5
CDS CCA 72 bp CAGCTTAAGAGGAAGGTTCACGAGCTCAGGAGGACTTaGGGGAGTGCTGCAAGATGGTGCGAGAAATGGAGA +
Preference number: 6 (lower is better)
Translates to: QLKRKVHELRRT*GSAARWCEKWR
Trigger: TCTCCATTTCTCGCACCATCTTGCAGCACTCCCCCAAGTCCTCCTGAGCTCGTGAACCTTCCTCTTAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488128.6
CDS CCA 72 bp AAGTCCAACAAAGTTCTGGAACCCTTCAGGCAGTGTTaGGCACACTTCACAGGGGTCACCCTAGCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: KSNKVLEPFRQC*AHFTGVTLAEG
Trigger: CCCTTCTGCTAGGGTGACCCCTGTGAAGTGTGCCCAACACTGCCTGAAGGGTTCCAGAACTTTGTTGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529928.1
CDS CAA 72 bp GAAGTCCAACAAAGTTCTGGAACCCTTCAGGCAGTGTaGGGCACACTTCACAGGGGTCACCCTTCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: EVQQSSGTLQAV*GTLHRGHPSLP
Trigger: AGGGAGAGAAGGGTGACCCCTGTGAAGTGTGCCCAACACTGCCTGAAGGGTTCCAGAACTTTGTTGGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373667.4
ENST00000373668.7
ENST00000373672.8
CDS CAA 72 bp GAAGTCCAACAAAGTTCTGGAACCCTTCAGGCAGTGTaGGGCACACTTCACAGGGGTCACCCTAGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: EVQQSSGTLQAV*GTLHRGHPSRR
Trigger: CCTTCTGCTAGGGTGACCCCTGTGAAGTGTGCCCAACACTGCCTGAAGGGTTCCAGAACTTTGTTGGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529928.1
CDS TCA 72 bp TCACGTTGGCTGGCAGGCTACTACTGTGTTCCAATTTaGGTCCTTCCTGCTGTGAAGGTGGGCATTGTGCAC +
Preference number: 6 (lower is better)
Translates to: SRWLAGYYCVPI*VLPAVKVGIVH
Trigger: GTGCACAATGCCCACCTTCACAGCAGGAAGGACTCAAATTGGAACACAGTAGTAGCCTGCCAGCCAACGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000532877.1
CDS CCA 72 bp GAGTCGGTGGATGAGGTTGAAGCCAGTCACGTTGGCTaGCAGGCTACTACTGTGTTCCAATTTGAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: ESVDEVEASHVG*QATTVFQFESF
Trigger: GAAGGACTCAAATTGGAACACAGTAGTAGCCTGCCAGCCAACGTGACTGGCTTCAACCTCATCCACCGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373668.7
ENST00000373672.8
ENST00000532877.1
CDS CCA 72 bp GCAGAAGCAGCGGGTGTAGACCTTGCCTTCAGACTGTaGATTGATCTCAATGAGCTCATTGCTCTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: AEAAGVDLAFRL*IDLNELIALGV
Trigger: GACACCCAGAGCAATGAGCTCATTGAGATCAATCCACAGTCTGAAGGCAAGGTCTACACCCGCTGCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CCA 72 bp CAGAAGTGTCACCAGATGCTAGACTCTGAGGATGTCTaGGATTGGGCAGGTGGAGGAGAAAAGTGCATGCCA +
Preference number: 6 (lower is better)
Translates to: QKCHQMLDSEDV*DWAGGGEKCMP
Trigger: TGGCATGCACTTTTCTCCTCCACCTGCCCAATCCCAGACATCCTCAGAGTCTAGCATCTGGTGACACTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS GCA 72 bp GGCAGGCTACTACTGTGTTCCAATTTGAGTCCTTCCTaGTGTGAAGGTGGGCATTGTGCACCTGTATTTGCC +
Preference number: 6 (lower is better)
Translates to: GRLLLCSNLSPS*CEGGHCAPVFA
Trigger: GGCAAATACAGGTGCACAATGCCCACCTTCACAGCAGGAAGGACTCAAATTGGAACACAGTAGTAGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS GCA 72 bp GTCCTCAGGATAAAGCACTCATTCGTTGGCCGGGCATaGAAGGCCATTCATTATGTGGTCCTGATCGTTCCT +
Preference number: 6 (lower is better)
Translates to: VLRIKHSFVGRA*KAIHYVVLIVP
Trigger: AGGAACGATCAGGACCACATAATGAATGGCCTTGCATGCCCGGCCAACGAATGAGTGCTTTATCCTGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461217.1
CDS CCA 72 bp CTGCCCCAGAGTGGTCCTTCTAGAAGACAGTTCTCCTaGTGTTACTCCCTGCTTAGAAATTCTGATGGCTCC +
Preference number: 6 (lower is better)
Translates to: LPQSGPSRRQFS*CYSLLRNSDGS
Trigger: GGAGCCATCAGAATTTCTAAGCAGGGAGTAACACCAGGAGAACTGTCTTCTAGAAGGACCACTCTGGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461217.1
CDS CAA 72 bp CCTGCAATGCCAATACCAATGTCCCCTTTTTCACCTTaGGTACCAGGCAATCCTCTTACTCCTGGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: PAMPIPMSPFSP*VPGNPLTPGKP
Trigger: GGGCTTGCCAGGAGTAAGAGGATTGCCTGGTACCAAAGGTGAAAAAGGGGACATTGGTATTGGCATTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS TCA 72 bp GAAAGTGTCACAGAAGTGTCACCAGATGCTAGACTCTaGGGATGTCTGGGATTGGGCAGGTGGAGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: ESVTEVSPDARL*GCLGLGRWRRK
Trigger: TTTTCTCCTCCACCTGCCCAATCCCAGACATCCTCAGAGTCTAGCATCTGGTGACACTTCTGTGACACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS GCA 72 bp ATGTCTGGGATTGGGCAGGTGGAGGAGAAAAGTGCATaGCAGAGGGAACCTAAGAGAAGGATAAAGACTTGC +
Preference number: 6 (lower is better)
Translates to: MSGIGQVEEKSA*QREPKRRIKTC
Trigger: GCAAGTCTTTATCCTTCTCTTAGGTTCCCTCTGGCATGCACTTTTCTCCTCCACCTGCCCAATCCCAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488897.5
CDS CCA 72 bp CTGCAATGCCAATACCAATGTCCCCTTTTTCACCTTTaGTACCAGGCAATCCTCTTACTCCTGGCAAGCCCT +
Preference number: 6 (lower is better)
Translates to: LQCQYQCPLFHL*YQAILLLLASP
Trigger: AGGGCTTGCCAGGAGTAAGAGGATTGCCTGGTACCAAAGGTGAAAAAGGGGACATTGGTATTGGCATTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373672.8
ENST00000461217.1
ENST00000488128.6
ENST00000488897.5
CDS CCA 72 bp GCTCCGCTCTTGGCTGTTGACTTCCAGGGATATCTGTaGATACCCATTTGCATCGGTCACTTGAAACAGATA +
Preference number: 6 (lower is better)
Translates to: APLLAVDFQGYL*IPICIGHLKQI
Trigger: TATCTGTTTCAAGTGACCGATGCAAATGGGTATCCACAGATATCCCTGGAAGTCAACAGCCAAGAGCGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CAA 90 bp GTTGACTTCCAGGGATATCTGTGGATACCCATTTGCATCGGTCACTaGAAACAGATACCACGTCTTCTGGTGGGTGTGTTTCTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: VDFQGYLWIPICIGH*KQIPRLLVGVFLQQ
Trigger: CTGCTGAAGAAACACACCCACCAGAAGACGTGGTATCTGTTTCAAGTGACCGATGCAAATGGGTATCCACAGATATCCCTGGAAGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS TCA 72 bp AGGGATATCTGTGGATACCCATTTGCATCGGTCACTTaGAACAGATACCACGTCTTCTGGTGGGTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: RDICGYPFASVT*NRYHVFWWVCF
Trigger: GAAACACACCCACCAGAAGACGTGGTATCTGTTTCAAGTGACCGATGCAAATGGGTATCCACAGATATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS GCA 72 bp GCTGTTGACTTCCAGGGATATCTGTGGATACCCATTTaGATCGGTCACTTGAAACAGATACCACGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: AVDFQGYLWIPI*IGHLKQIPRLL
Trigger: CAGAAGACGTGGTATCTGTTTCAAGTGACCGATGCAAATGGGTATCCACAGATATCCCTGGAAGTCAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8
CDS CAA 72 bp CAGGGATATCTGTGGATACCCATTTGCATCGGTCACTaGAAACAGATACCACGTCTTCTGGTGGGTGTGTTT +
Preference number: 6 (lower is better)
Translates to: QGYLWIPICIGH*KQIPRLLVGVF
Trigger: AAACACACCCACCAGAAGACGTGGTATCTGTTTCAAGTGACCGATGCAAATGGGTATCCACAGATATCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373668.7
ENST00000373672.8