RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL15A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000204291

Ensembl transcript IDs: ENST00000375001.8, ENST00000467052.1, ENST00000471477.1, ENST00000496686.1, ENST00000610452.1

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTaGGATGCGTTCACACTGCTGGGGTTTCCTGCAGAATCTAGCACC +
Preference number: 1 (lower is better)
Translates to: AECHGLCFQLALNLC*DAFTLLGFPAESST
Trigger: GGTGCTAGATTCTGCAGGAAACCCCAGCAGTGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
3UTR GCA 90 bp TTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACTaGTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGAT +
Preference number: 1 (lower is better)
Translates to: FVFNLLLTYVGMRSH*WGFLQNLAPIYGSD
Trigger: ATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
3UTR CCA 90 bp GTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACTGCTaGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTT +
Preference number: 1 (lower is better)
Translates to: VFNLLLTYVGMRSHC*GFLQNLAPIYGSDF
Trigger: AAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
3UTR TCA 90 bp TTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTTTaGTCTGAGTCCTCTATGTCTTCAGTTTTGAGTGTATTGAGGTAT +
Preference number: 1 (lower is better)
Translates to: FPAESSTNIWIRFCL*SESSMSSVLSVLRY
Trigger: ATACCTCAATACACTCAAAACTGAAGACATAGAGGACTCAGATCAAAGACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
3UTR-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAATTTTGTCTTTGATCTaGGTCCTCTATGTCTTCAGT +
Preference number: 2 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSILSLI*VLYVFS
Trigger: ACTGAAGACATAGAGGACTCAGATCAAAGACAAAAT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
3UTR CCA 72 bp CATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTaGGATGCGTTCACACTGCTGGGGTTTCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: HGLCFQLALNLC*DAFTLLGFPAE
Trigger: TTCTGCAGGAAACCCCAGCAGTGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
3UTR GCA 72 bp AACTTGCTCTTAACCTATGTTGGGATGCGTTCACACTaGTGGGGTTTCCTGCAGAATCTAGCACCAATATAT +
Preference number: 3 (lower is better)
Translates to: NLLLTYVGMRSH*WGFLQNLAPIY
Trigger: ATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTGTGAACGCATCCCAACATAGGTTAAGAGCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACACCGCGGGTCTGGGTaGCAGCAGGGAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTHRGSG*QQGGAW
Trigger: CCACGCCCCTCCCTGCTGTCACCCAGACCCGCGGTG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGCCATCTCGCGGGTCTaGGGAGCCCCGGAAGGCGCG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVAISRV*GAPEGA
Trigger: CGCGCCTTCCGGGGCTCCGCAGACCCGCGAGATGGC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCCCCCTCGACGGACGTaGGCTCGCCTCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGPPRRT*ARLCCL
Trigger: GAGGCAGCAGAGGCGAGCGCACGTCCGTCGAGGGGG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAGGGTCGCTGAGCGCTaGCCGCCGCGCTCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTRVAER*PPRSPF
Trigger: GAAGGGCGAGCGCGGCGGCCAGCGCTCAGCGACCCT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACCGCGGGTCTGGGTaGCAGCAGGGAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSHRGSG*QQGGAW
Trigger: CCACGCCCCTCCCTGCTGTCACCCAGACCCGCGGTG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGCCGTCCTCCACACCTaGGAGCCGCAGGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGAVLHT*EPQAQV
Trigger: TACCTGGGCCTGCGGCTCTCAGGTGTGGAGGACGGC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGTCGGGGTGCACGGTaGGCTGCTGGAGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTGRGAR*AAGGSQ
Trigger: CTGGCTCCCTCCAGCAGCTCACCGTGCACCCCGACC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGGTCGGGGTGCACGGTaGGCTGCTGGAGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVGRGAR*AAGGSQ
Trigger: CTGGCTCCCTCCAGCAGCTCACCGTGCACCCCGACC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCGCGCTCGCCCTTCCTaGAGGGAACAAAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGRARPS*REQRRR
Trigger: GCGCCGCCTTTGTTCCCTGCAGGAAGGGCGAGCGCG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAGGGTCGCTGAGCGCTaGCCGCCGCGCTCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSRVAER*PPRSPF
Trigger: GAAGGGCGAGCGCGGCGGCCAGCGCTCAGCGACCCT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGTCGCACCGCGGGTCTaGGTGACAGCAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTVAPRV*VTAGRG
Trigger: GCCCCTCCCTGCTGTCACCCAGACCCGCGGTGCGAC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGCCTGGGAGGACCGCTaGAAGGGGATGCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGAWEDR*KGMRLC
Trigger: GCACAGCCGCATCCCCTTCCAGCGGTCCTCCCAGGC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGCCGTCCTCCACACCTaGGAGCCGCAGGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVAVLHT*EPQAQV
Trigger: TACCTGGGCCTGCGGCTCTCAGGTGTGGAGGACGGC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGGAGGCAAGTCCCGTaGCCGCTGTGTCCGCGGTTC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTGRQVP*PLCPRF
Trigger: GAACCGCGGACACAGCGGTCACGGGACTTGCCTCCC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGGGAGGCAAGTCCCGTaGCCGCTGTGTCCGCGGTTC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVGRQVP*PLCPRF
Trigger: GAACCGCGGACACAGCGGTCACGGGACTTGCCTCCC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCGCCACCACGGGTGCTaGTGGGCTTCACCACGACGC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVRHHGC*WASPRR
Trigger: GCGTCGTGGTGAAGCCCAGCAGCACCCGTGGTGGCG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGCACGCCACCACGGGTaGTGCTGGGCTTCACCACGA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGARHHG*CWASPR
Trigger: TCGTGGTGAAGCCCAGCAGCACCCGTGGTGGCGTGC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCCCCGGTGGGCACACTaGTGGCCTCTGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGPRWAH*WPLLLQ
Trigger: CTGGAGAAGCAGAGGCCAGCAGTGTGCCCACCGGGG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGGCATGCTGGCGAGTaGCTCGGCCTCCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVRHAGE*LGLPCC
Trigger: GCAGCAGGGGAGGCCGAGGCACTCGCCAGCATGCCT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATGCGCTCGCCTCTGCTaGCTCCACCCGCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSCARLC*LHPRLP
Trigger: AGGCAGCCGCGGGTGGAGGCAGCAGAGGCGAGCGCA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAACGTGCGCTCGCCTCTaGTGCCTCCACCCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSTCARL*CLHPRL
Trigger: CAGCCGCGGGTGGAGGCAGCAGAGGCGAGCGCACGT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGTCGCACCGCGGGTCTaGGTGACAGCAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSVAPRV*VTAGRG
Trigger: GCCCCTCCCTGCTGTCACCCAGACCCGCGGTGCGAC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGGGTTGGTCCCCCGGTaGGCACACTGCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVGLVPR*AHCWPL
Trigger: CAGAGGCCAGCAGTGTGCCCACCGGGGGACCAACCC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACTTCCCCAGGCATGCTaGCGAGTGCCTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTLPQAC*RVPRPP
Trigger: GGGAGGCCGAGGCACTCGCCAGCATGCCTGGGGAAG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGGCTCTGGGCGGACATaGAGAGGTCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVGSGRT*RGPAPR
Trigger: CCGGGGAGCTGGACCTCTCCATGTCCGCCCAGAGCC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGCTCTGGGCGGACATaGAGAGGTCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTGSGRT*RGPAPR
Trigger: CCGGGGAGCTGGACCTCTCCATGTCCGCCCAGAGCC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTTCAGGAGCCACTGTaGGCAGGGGCAGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGFQEPL*AGAAVA
Trigger: GGCCACCGCTGCCCCTGCCCACAGTGGCTCCTGAAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGAGGCCATTCAGTCCTaGGCGACCAGGTCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVEAIQS*ATRSPG
Trigger: CCCGGGCGACCTGGTCGCCCAGGACTGAATGGCCTC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTTGGCCAGCCGGGCCTaGATTTCCGGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLASRA*ISGQAW
Trigger: CCAGGCCTGCCCGGAAATCCAGGCCCGGCTGGCCAA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCAGACCAGGAGCACCTaGGGGTCCTTGGGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGQTRST*GSLGPN
Trigger: GTTGGGCCCCAAGGACCCCCAGGTGCTCCTGGTCTG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAGGGCCAGGGGGACCTaGAAGGGCCACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTRARGT*KGHSCS
Trigger: GGAGCAGCTGTGGCCCTTCCAGGTCCCCCTGGCCCT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGAAGGCCCCAGCCCCTaGGCCGCTGTCAGTAATGGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTEGPSP*AAVSNG
Trigger: CCCATTACTGACAGCGGCTCAGGGGCTGGGGCCTTC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCTTCTCCAGCAGTGCTaGTGGGCACCTCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLLQQC*WAPRPA
Trigger: GGCTGGCCGAGGTGCCCATCAGCACTGCTGGAGAAG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACTTCTCCAGCAGTGCTaGTGGGCACCTCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTLLQQC*WAPRPA
Trigger: GGCTGGCCGAGGTGCCCATCAGCACTGCTGGAGAAG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACGCGCTCGCCCTTCCTaGAGGGAACAAAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSRARPS*REQRRR
Trigger: GCGCCGCCTTTGTTCCCTGCAGGAAGGGCGAGCGCG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACGCCACCACGGGTGCTaGTGGGCTTCACCACGACGC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSRHHGC*WASPRR
Trigger: GCGTCGTGGTGAAGCCCAGCAGCACCCGTGGTGGCG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGCACGCCACCACGGGTaGTGCTGGGCTTCACCACGA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTARHHG*CWASPR
Trigger: TCGTGGTGAAGCCCAGCAGCACCCGTGGTGGCGTGC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCCCCGGTGGGCACACTaGTGGCCTCTGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVPRWAH*WPLLLQ
Trigger: CTGGAGAAGCAGAGGCCAGCAGTGTGCCCACCGGGG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAGGCATGCTGGCGAGTaGCTCGGCCTCCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSRHAGE*LGLPCC
Trigger: GCAGCAGGGGAGGCCGAGGCACTCGCCAGCATGCCT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACATCAGGGGGAGGGCTaGCGGACTCTTCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTHQGEG*RTLHPQ
Trigger: CTGGGGGTGAAGAGTCCGGCAGCCCTCCCCCTGATG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTCTTCCCCGAGGCTCTaGGCGGACATGGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSSPRL*ADMERS
Trigger: GGACCTCTCCATGTCCGCCCAGAGCCTCGGGGAAGA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATTTCAGGAGCCACTGTaGGCAGGGGCAGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTFQEPL*AGAAVA
Trigger: GGCCACCGCTGCCCCTGCCCACAGTGGCTCCTGAAA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTGGCCCTGGGGGTCCTaGAGGACCTCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVWPWGS*RTSQQL
Trigger: CAGCTGCTGAGAGGTCCTCCAGGACCCCCAGGGCCA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTCCCGGGAAGGCCGGTaGCTCCATCAACTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSREGR*LHQLQA
Trigger: AGCCTGGAGTTGATGGAGCCACCGGCCTTCCCGGGA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGACCTGGTGGTCCCTaGGCTCCCTGGTCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGPGGP*APWSPF
Trigger: AAAAGGCGACCAGGGAGCCCAGGGACCACCAGGTCC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGCACCTGGGGGTCCTTaGGGCCCAACGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVAPGGP*GPTTVS
Trigger: GGAGACAGTCGTTGGGCCCCAAGGACCCCCAGGTGC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCAGACCAGGAGCACCTaGGGGTCCTTGGGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVQTRST*GSLGPN
Trigger: GTTGGGCCCCAAGGACCCCCAGGTGCTCCTGGTCTG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTGCTCCCAGGATAGCTaGAGGTCCTGGTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVCSQDS*RSWWPR
Trigger: CCGGGGCCACCAGGACCTCCAGCTATCCTGGGAGCA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAGGGCCAGGGGGACCTaGAAGGGCCACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSRARGT*KGHSCS
Trigger: GGAGCAGCTGTGGCCCTTCCAGGTCCCCCTGGCCCT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGAAAGCGCAGGGGGTaGAGGGCTGTCGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGKRRG*RAVGRN
Trigger: ATTCCTGCCGACAGCCCTCCACCCCCTGCGCTTTCC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGCAGGCCCAGGTAGATaGCCTTCTGGAAGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGAGPGR*PSGRRQ
Trigger: CTGACGCCTTCCAGAAGGTCATCTACCTGGGCCTGC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCCGTGTAGTAGAGGATaGTCCGCTGGTGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGPCSRG*SAGGRP
Trigger: AGGACGGCCACCAGCGGATCATCCTCTACTACACGG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGTTGTTCCTCCTTGGTaGCATCTCGCGGGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGVVPPW*HLAGLR
Trigger: CCGCAGACCCGCGAGATGGCACCAAGGAGGAACAAC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGGTGCACGGTGAGCTaGTGGAGGGAGCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGCTVS*WREPVN
Trigger: ATTCACTGGCTCCCTCCAGCAGCTCACCGTGCACCC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGACTCCGTCTGCCTCCTaGAGCCCACTGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGTPSAS*SPLVSP
Trigger: TGGAGAGACCAGTGGGCTGCAGGAGGCAGACGGAGT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCAGGGGGAGGGCTaGCGGACTCTTCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSHQGEG*RTLHPQ
Trigger: CTGGGGGTGAAGAGTCCGGCAGCCCTCCCCCTGATG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTGGAAGGGCCACAGCTaGTCCCAGGATAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGWKGHS*SQDSWR
Trigger: CCTCCAGCTATCCTGGGAGCAGCTGTGGCCCTTCCA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACAGCAGGGAGGGGCGTaGAGACCGAGAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTQQGGA*RPRAAS
Trigger: TGATGCTGCTCTCGGTCTCCACGCCCCTCCCTGCTG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCTGGGCGGCCAACATTaGCACCAGGCCCGAAACTGT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLGGQH*HQARNC
Trigger: ACAGTTTCGGGCCTGGTGCCAATGTTGGCCGCCCAG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGATGAGAGTCCTGGCTaGGCGGCCAACATTGGCACC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGDESPG*AANIGT
Trigger: GGTGCCAATGTTGGCCGCCCAGCCAGGACTCTCATC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACCTCCTGCAGCCCACTaGTCTCTCCAGATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTPPAAH*SLQMPR
Trigger: CCTCGGCATCTGGAGAGACCAGTGGGCTGCAGGAGG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGACATAGAGAGGGTTaGTCCCCCGGTGGGCACACT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGHREG*SPGGHT
Trigger: AGTGTGCCCACCGGGGGACCAACCCTCTCTATGTCC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTGCTTGGACCCACAGTaGCCTCTTCCCCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGCLDPQ*PLPRGS
Trigger: AGAGCCTCGGGGAAGAGGCCACTGTGGGTCCAAGCA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATGGCCCTGGGGGTCCTaGAGGACCTCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSWPWGS*RTSQQL
Trigger: CAGCTGCTGAGAGGTCCTCCAGGACCCCCAGGGCCA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGAGGACCTGGAAATCCTaGCAGCCCAGGCAACCCGTC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGRTWKS*QPRQPV
Trigger: GACGGGTTGCCTGGGCTGCCAGGATTTCCAGGTCCT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGTCCTGGTGGTCCTTTaGGCCCCATTGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTVLVVL*APLVLG
Trigger: CCCCAGGACCAATGGGGCCCAAAGGACCACCAGGAC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGGACCTGGTGGTCCCTaGGCTCCCTGGTCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVGPGGP*APWSPF
Trigger: AAAAGGCGACCAGGGAGCCCAGGGACCACCAGGTCC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGCACCTGGGGGTCCTTaGGGCCCAACGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSAPGGP*GPTTVS
Trigger: GGAGACAGTCGTTGGGCCCCAAGGACCCCCAGGTGC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTCTTCCAAAGCCAGGTaGCCCAGGCAGACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSSKAR*PRQTRS
Trigger: GCTCCTGGTCTGCCTGGGCCACCTGGCTTTGGAAGA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGCTGATGTGGGTTGCTaGAAAGCGCAGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGADVGC*KAQGVE
Trigger: CTCCACCCCCTGCGCTTTCCAGCAACCCACATCAGC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCACAAGGCGGACGCCATaGGGGCTGGAGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVTRRTP*GLEPCQ
Trigger: TTGGCATGGCTCCAGCCCCCATGGCGTCCGCCTTGT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAACAAGGCGGACGCCATaGGGGCTGGAGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTTRRTP*GLEPCQ
Trigger: TTGGCATGGCTCCAGCCCCCATGGCGTCCGCCTTGT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTGCGTGAGGTCCAGGTaGCCCTGGGAAGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVCVRSR*PWEAVS
Trigger: AGAGACTGCTTCCCAGGGTCACCTGGACCTCACGCA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTCTGGAAGGCGTCAGTaGTGGCGAAGAGCACGCCAC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSGRRQ*WRRARH
Trigger: GTGGCGTGCTCTTCGCCATCACTGACGCCTTCCAGA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGTTGTTCCTCCTTGGTaGCATCTCGCGGGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTVVPPW*HLAGLR
Trigger: CCGCAGACCCGCGAGATGGCACCAAGGAGGAACAAC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCACCGCTGGAAGGGGATaGGGCTGTGCTCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVTAGRG*GCAPHS
Trigger: ACTGTGAGGAGCACAGCCGCATCCCCTTCCAGCGGT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCTCAGCTACTCCGTCTaGCTCCTGCAGCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLSYSV*LLQPTG
Trigger: ACCAGTGGGCTGCAGGAGGCAGACGGAGTAGCTGAG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAGGACCAGAAGTGACTaGCCGCTCAGGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTRTRSD*PLRGHG
Trigger: ACCATGGCCCCTGAGCGGGCAGTCACTTCTGGTCCT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGGACCAGAAGTGACTaGCCGCTCAGGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVRTRSD*PLRGHG
Trigger: ACCATGGCCCCTGAGCGGGCAGTCACTTCTGGTCCT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGAGCCCTCTGCTTCTaGTCCTGCCGTGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVRALCF*SCRGSN
Trigger: GTTGGACCCACGGCAGGAGCAGAAGCAGAGGGCTCT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCAGCAGCTGCTCACTaGCCACCAGGTCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSAAAH*PPGHQS
Trigger: GCTCTGGTGACCTGGTGGGCAGTGAGCAGCTGCTGA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTCAGCAGCTGCTCACTaGCCACCAGGTCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSAAAH*PPGHQS
Trigger: GCTCTGGTGACCTGGTGGGCAGTGAGCAGCTGCTGA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAATCCAAGTCCCATTGTaGATCCAGGGCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTIQVPL*IQGLGA
Trigger: GGCCCCCAGGCCCTGGATGCACAATGGGACTTGGAT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCATCCAAGTCCCATTGTaGATCCAGGGCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVIQVPL*IQGLGA
Trigger: GGCCCCCAGGCCCTGGATGCACAATGGGACTTGGAT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGACAAGACCTTGATGTaGCCAGGTGGCCCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTDKTLM*PGGPLG
Trigger: GCCGAGAGGGCCACCTGGGCACATCAAGGTCTTGTC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATGGAAGGGCCACAGCTaGTCCCAGGATAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTWKGHS*SQDSWR
Trigger: CCTCCAGCTATCCTGGGAGCAGCTGTGGCCCTTCCA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTGGGGGCTGGAGCCATaGCAAATGACTTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGWGLEP*QMTFWG
Trigger: GCCCCAGAAAGTCATTTGGCATGGCTCCAGCCCCCA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACCAGAATCTTCCCCGTaGTCAGCGGGGAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTPESSP*SAGRQV
Trigger: GACTTGCCTCCCCGCTGAGCACGGGGAAGATTCTGG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCCCGTTGTTCCTCCTTaGTGCCATCTCGCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVPVVPP*CHLAGL
Trigger: CAGACCCGCGAGATGGCACCAAGGAGGAACAACGGG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGATGAGAGTCCTGGCTaGGCGGCCAACATTGGCACC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVDESPG*AANIGT
Trigger: GGTGCCAATGTTGGCCGCCCAGCCAGGACTCTCATC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGGATGATCCGCTGGTaGCCGTCCTCCACACCTGAG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVRMIRW*PSSTPE
Trigger: CTCAGGTGTGGAGGACGGCCACCAGCGGATCATCCT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACCTCCTGCAGCCCACTaGTCTCTCCAGATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSPPAAH*SLQMPR
Trigger: CCTCGGCATCTGGAGAGACCAGTGGGCTGCAGGAGG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATCTTCCCCGAGGCTCTaGGCGGACATGGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSSPRL*ADMERS
Trigger: GGACCTCTCCATGTCCGCCCAGAGCCTCGGGGAAGA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATGCTTGGACCCACAGTaGCCTCTTCCCCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTCLDPQ*PLPRGS
Trigger: AGAGCCTCGGGGAAGAGGCCACTGTGGGTCCAAGCA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCTTCTGCTCCTGCCGTaGGTCCAACAGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLLLLP*VQQAQK
Trigger: CTTCTGGGCCTGTTGGACCCACGGCAGGAGCAGAAG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATCCCGGGAAGGCCGGTaGCTCCATCAACTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSREGR*LHQLQA
Trigger: AGCCTGGAGTTGATGGAGCCACCGGCCTTCCCGGGA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAGGACCTGGAAATCCTaGCAGCCCAGGCAACCCGTC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTRTWKS*QPRQPV
Trigger: GACGGGTTGCCTGGGCTGCCAGGATTTCCAGGTCCT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGGGCCCCATTGGTCCTaGGGCTCCATGCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSGPHWS*GSMHSR
Trigger: CCTGGAATGCATGGAGCCCCAGGACCAATGGGGCCC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGTCCTGGTGGTCCTTTaGGCCCCATTGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSVLVVL*APLVLG
Trigger: CCCCAGGACCAATGGGGCCCAAAGGACCACCAGGAC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGCTGTCGGCAGGAATaGGGATCAGTTCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGCRQE*GSVLPA
Trigger: AGCTGGGAGAACTGATCCCCATTCCTGCCGACAGCC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGCTGATGTGGGTTGCTaGAAAGCGCAGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTADVGC*KAQGVE
Trigger: CTCCACCCCCTGCGCTTTCCAGCAACCCACATCAGC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATCTGGAAGGCGTCAGTaGTGGCGAAGAGCACGCCAC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSGRRQ*WRRARH
Trigger: GTGGCGTGCTCTTCGCCATCACTGACGCCTTCCAGA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGCAGGCCCAGGTAGATaGCCTTCTGGAAGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSAGPGR*PSGRRQ
Trigger: CTGACGCCTTCCAGAAGGTCATCTACCTGGGCCTGC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACCGTGTAGTAGAGGATaGTCCGCTGGTGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSPCSRG*SAGGRP
Trigger: AGGACGGCCACCAGCGGATCATCCTCTACTACACGG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCTCCTTTGGTACCCTTaGGGCCATTCAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLLWYP*GHSVLG
Trigger: GCCCAGGACTGAATGGCCTCAAGGGTACCAAAGGAG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGTGGAGGCAGAAGCTaGTGTGGGTTGCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTGGGRS*CGLLES
Trigger: GCTTTCCAGCAACCCACATCAGCTTCTGCCTCCACC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGGTGGAGGCAGAAGCTaGTGTGGGTTGCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVGGGRS*CGLLES
Trigger: GCTTTCCAGCAACCCACATCAGCTTCTGCCTCCACC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGGGTGCACGGTGAGCTaGTGGAGGGAGCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSGCTVS*WREPVN
Trigger: ATTCACTGGCTCCCTCCAGCAGCTCACCGTGCACCC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGACTGGTCTCTCCAGATaGCGAGGACTCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGTGLSR*RGLFRV
Trigger: GACCCTGAAGAGTCCTCGGCATCTGGAGAGACCAGT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAACTCCGTCTGCCTCCTaGAGCCCACTGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSTPSAS*SPLVSP
Trigger: TGGAGAGACCAGTGGGCTGCAGGAGGCAGACGGAGT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAGAGCCCTCTGCTTCTaGTCCTGCCGTGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSRALCF*SCRGSN
Trigger: GTTGGACCCACGGCAGGAGCAGAAGCAGAGGGCTCT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGTCCTGGGGCTCCATaGATTCCAGGTTCACCCTTT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGPGAP*IPGSPF
Trigger: AAAGGGTGAACCTGGAATGCATGGAGCCCCAGGACC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGAAGCTGATGTGGGTTaGTGGAAAGCGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTEADVG*WKAQGV
Trigger: CACCCCCTGCGCTTTCCAGCAACCCACATCAGCTTC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGTGGACAACAGTCCTaGAGCTCTGGCCTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGGQQS*SSGLLE
Trigger: TTCAAGCAGGCCAGAGCTGCAGGACTGTTGTCCACC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACCAGAATCTTCCCCGTaGTCAGCGGGGAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSPESSP*SAGRQV
Trigger: GACTTGCCTCCCCGCTGAGCACGGGGAAGATTCTGG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCCTGAAGAAGGTGGATaGGATGAGAGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGPEEGG*DESPGW
Trigger: CCAGCCAGGACTCTCATCCCATCCACCTTCTTCAGG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGACACATGGGAGCCTaGCTCCGTGTAGTAGAGGAT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGHMGA*LRVVED
Trigger: ATCCTCTACTACACGGAGCCAGGCTCCCATGTGTCC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAAGCGGTTCCACCTGTaGGTCATCACAGGCACCGAG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVKRFHL*VITGTE
Trigger: CTCGGTGCCTGTGATGACCCACAGGTGGAACCGCTT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGTCACTTCCTCACCCTaGACAATCATGGCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGVTSSP*TIMAKR
Trigger: CCGCTTCGCCATGATTGTCCAGGGTGAGGAAGTGAC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTCAAAAGCCAAAGCCTaGGAGGACCGCTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSKAKA*EDRWKG
Trigger: CCCCTTCCAGCGGTCCTCCCAGGCTTTGGCTTTTGA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTGCACGGTGAGCTGCTaGAGGGAGCCAGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVCTVSC*REPVNL
Trigger: GAGATTCACTGGCTCCCTCCAGCAGCTCACCGTGCA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGGACATAGAGAGGGTTaGTCCCCCGGTGGGCACACT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSGHREG*SPGGHT
Trigger: AGTGTGCCCACCGGGGGACCAACCCTCTCTATGTCC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACTTCTGCTCCTGCCGTaGGTCCAACAGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLLLLP*VQQAQK
Trigger: CTTCTGGGCCTGTTGGACCCACGGCAGGAGCAGAAG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCCCCCTTTCTCCCTTaGGTCCCCGGTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSPFLP*VPGLLS
Trigger: AGAAAGGAGACCGGGGACCCAAGGGAGAAAGGGGGA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTCCCCCTTTCTCCCTTaGGTCCCCGGTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSPFLP*VPGLLS
Trigger: AGAAAGGAGACCGGGGACCCAAGGGAGAAAGGGGGA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGGGTCCCACAATACTaGCTCCATCCATCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGVPQY*LHPSPF
Trigger: AAAGGGGGATGGATGGAGCCAGTATTGTGGGACCCC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATGGTCCTCTAGGACCTaGAAATCCTGGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTWSSRT*KSWQPR
Trigger: CCTGGGCTGCCAGGATTTCCAGGTCCTAGAGGACCA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATGTCCTCTGTCAGGATaGCACCCGGCTCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTCPLSG*HPALPS
Trigger: AGAAGGGAGAGCCGGGTGCCATCCTGACAGAGGACA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCCTTTGGGCCCCATTaGTCCTGGGGCTCCATGCAT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSFGPH*SWGSMH
Trigger: ATGCATGGAGCCCCAGGACCAATGGGGCCCAAAGGA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATTTCCGGGCAGGCCTaGAGGCCCAGACATAAGGAA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGISGQA*RPRHKE
Trigger: TTCCTTATGTCTGGGCCTCCAGGCCTGCCCGGAAAT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGACTGTCTCCCCTTTTTaGCCAGCCGGGCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGTVSPF*PAGPGF
Trigger: AAATCCAGGCCCGGCTGGCCAAAAAGGGGAGACAGT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGCTGTCGGCAGGAATaGGGATCAGTTCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTGCRQE*GSVLPA
Trigger: AGCTGGGAGAACTGATCCCCATTCCTGCCGACAGCC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAGCCACCATAGCCTGTaGCAAAGGATACGGACGAGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSHHSL*QRIRTR
Trigger: CCTCGTCCGTATCCTTTGTCACAGGCTATGGTGGCT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCTCCTGCATTGCCCATaGAGATTCCAGCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLLHCP*RFQRWT
Trigger: AGTCCAGCGCTGGAATCTTCATGGGCAATGCAGGAG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACTCCTTTGGTACCCTTaGGGCCATTCAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLLWYP*GHSVLG
Trigger: GCCCAGGACTGAATGGCCTCAAGGGTACCAAAGGAG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCAGCTCTGGCCTGCTTaGAGCACTGAAAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGQLWPA*STENQL
Trigger: GAGCTGATTTTCAGTGCTTCAAGCAGGCCAGAGCTG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTGGAGCCATGCCAAATaGCTTTCTGGGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGWSHAK*LSGAKK
Trigger: CTTCTTGGCCCCAGAAAGTCATTTGGCATGGCTCCA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGCAGACACCAGCACTaGCCGTTGTTCCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSRHQH*PLFLLG
Trigger: ACCAAGGAGGAACAACGGGCAGTGCTGGTGTCTGCT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGAAGCTGATGTGGGTTaGTGGAAAGCGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSEADVG*WKAQGV
Trigger: CACCCCCTGCGCTTTCCAGCAACCCACATCAGCTTC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATGGGGGCTGGAGCCATaGCAAATGACTTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSWGLEP*QMTFWG
Trigger: GCCCCAGAAAGTCATTTGGCATGGCTCCAGCCCCCA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCAGGATGGCCCCTTTaGCTTGTTTGGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSGWPL*LVWGCC
Trigger: ACAGCAGCCCCAAACAAGGCAAAGGGGCCATCCTGA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAGTCGAGCAGAGCGTTaGAGCTTAGCGGAGGACGAA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSRAER*SLAEDE
Trigger: TTCGTCCTCCGCTAAGCTCCAACGCTCTGCTCGACT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGTCGAGCAGAGCGTTaGAGCTTAGCGGAGGACGAA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSRAER*SLAEDE
Trigger: TTCGTCCTCCGCTAAGCTCCAACGCTCTGCTCGACT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGACACATGGGAGCCTaGCTCCGTGTAGTAGAGGAT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTGHMGA*LRVVED
Trigger: ATCCTCTACTACACGGAGCCAGGCTCCCATGTGTCC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAAGCGGTTCCACCTGTaGGTCATCACAGGCACCGAG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSKRFHL*VITGTE
Trigger: CTCGGTGCCTGTGATGACCCACAGGTGGAACCGCTT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCACCCTGGACAATCATaGCGAAGCGGTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVHPGQS*RSGSTC
Trigger: ACAGGTGGAACCGCTTCGCCATGATTGTCCAGGGTG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGTCACTTCCTCACCCTaGACAATCATGGCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTVTSSP*TIMAKR
Trigger: CCGCTTCGCCATGATTGTCCAGGGTGAGGAAGTGAC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATCAAAAGCCAAAGCCTaGGAGGACCGCTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSKAKA*EDRWKG
Trigger: CCCCTTCCAGCGGTCCTCCCAGGCTTTGGCTTTTGA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATGCACGGTGAGCTGCTaGAGGGAGCCAGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSCTVSC*REPVNL
Trigger: GAGATTCACTGGCTCCCTCCAGCAGCTCACCGTGCA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGGGGTCCCACAATACTaGCTCCATCCATCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVGVPQY*LHPSPF
Trigger: AAAGGGGGATGGATGGAGCCAGTATTGTGGGACCCC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATGGTCCTCTAGGACCTaGAAATCCTGGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSWSSRT*KSWQPR
Trigger: CCTGGGCTGCCAGGATTTCCAGGTCCTAGAGGACCA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATCCTTTGGGCCCCATTaGTCCTGGGGCTCCATGCAT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSFGPH*SWGSMH
Trigger: ATGCATGGAGCCCCAGGACCAATGGGGCCCAAAGGA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAATTTCCGGGCAGGCCTaGAGGCCCAGACATAAGGAA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTISGQA*RPRHKE
Trigger: TTCCTTATGTCTGGGCCTCCAGGCCTGCCCGGAAAT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGGCAGAAGCTGATGTaGGTTGCTGGAAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVRQKLM*VAGKRR
Trigger: CCTGCGCTTTCCAGCAACCCACATCAGCTTCTGCCT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAGCCACCATAGCCTGTaGCAAAGGATACGGACGAGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSHHSL*QRIRTR
Trigger: CCTCGTCCGTATCCTTTGTCACAGGCTATGGTGGCT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACTCCTGCATTGCCCATaGAGATTCCAGCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLLHCP*RFQRWT
Trigger: AGTCCAGCGCTGGAATCTTCATGGGCAATGCAGGAG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCACCATCCACAGAATaGACCCCCTCCAGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSPSTE*TPSSVS
Trigger: TGACACACTGGAGGGGGTTCATTCTGTGGATGGTGA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCATCCTCAAAAGTACTaGGGGACACTTCGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGHPQKY*GTLRLQ
Trigger: CTGCAACCGAAGTGTCCCTCAGTACTTTTGAGGATG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATCCAGGGGGTCCCATaGAAACATCAGTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGIQGVP*KHQFLV
Trigger: AACCAGGAACTGATGTTTTCATGGGACCCCCTGGAT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCACCCTTTTCACCAACTaGGCCATTAGGCCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVTLFTN*AIRPSC
Trigger: GCAAGAGGGCCTAATGGCTCAGTTGGTGAAAAGGGT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCTCCTTTCTCTCCTTTaGGACCAATTGCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLLSLL*DQLQPL
Trigger: CAACGGCTGCAATTGGTCTCAAAGGAGAGAAAGGAG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTCTGGACTCCCAGGATaGGCAGTATCAACTGGCATT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSGLPG*AVSTGI
Trigger: AATGCCAGTTGATACTGCTCATCCTGGGAGTCCAGA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCAGCTCTGGCCTGCTTaGAGCACTGAAAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVQLWPA*STENQL
Trigger: GAGCTGATTTTCAGTGCTTCAAGCAGGCCAGAGCTG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATGGAGCCATGCCAAATaGCTTTCTGGGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTWSHAK*LSGAKK
Trigger: CTTCTTGGCCCCAGAAAGTCATTTGGCATGGCTCCA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCTCCTCTGTTGTGGCTaGTGCCAAGTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLLCCG*CQVFFI
Trigger: GATGAAGAAGACTTGGCAGCAGCCACAACAGAGGAG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGCCATTAGGCCCTCTTaGTCCCTTCTCCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTAIRPS*SLLPFH
Trigger: ATGAAAGGGGAGAAGGGAGCAAGAGGGCCTAATGGC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGCCATTAGGCCCTCTTaGTCCCTTCTCCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVAIRPS*SLLPFH
Trigger: ATGAAAGGGGAGAAGGGAGCAAGAGGGCCTAATGGC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACAGGTAAGCCTCTGTTaGCAGGGTCACCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTQVSLC*QGHPFH
Trigger: GTGAAAAGGGTGACCCTGGCAACAGAGGCTTACCTG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTCCTTTGAGACCAATTaGAGCCGTTGGTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSFETN*SRWSGE
Trigger: CTCTCCAGACCAACGGCTGCAATTGGTCTCAAAGGA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGGTGGACAACAGTCCTaGAGCTCTGGCCTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSGGQQS*SSGLLE
Trigger: TTCAAGCAGGCCAGAGCTGCAGGACTGTTGTCCACC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGTCCGCGGTTCGCCATaGTTCACAGTAGTTATCCAC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVVRGSP*FTVVIH
Trigger: GTGGATAACTACTGTGAAGCATGGCGAACCGCGGAC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGGATGCGTTCACACTaGTGGGGTTTCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTGMRSH*WGFLQN
Trigger: ATTCTGCAGGAAACCCCAGCAGTGTGAACGCATCCC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACCTGAAGAAGGTGGATaGGATGAGAGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSPEEGG*DESPGW
Trigger: CCAGCCAGGACTCTCATCCCATCCACCTTCTTCAGG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGGGGAGGATGGAGTTaGAGGTGTGTTTATGGGTTC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTGGGWS*RCVYGF
Trigger: GAACCCATAAACACACCTCCAACTCCATCCTCCCCC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGTGACCCCTTCCTCTaGGTTCTCCGTGGACATAGA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSDPFL*VLRGHR
Trigger: TCTATGTCCACGGAGAACCCAGAGGAAGGGGTCACT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTCATTATCTGGACCTaGAGTGACCCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGFIIWT*SDPFLW
Trigger: CCAGAGGAAGGGGTCACTCCAGGTCCAGATAATGAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGACGCTCTTCATTATCTaGACCTGGAGTGACCCCTTC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGTLFII*TWSDPF
Trigger: GAAGGGGTCACTCCAGGTCCAGATAATGAAGAGCGT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAACTGTCTTCACTGCTTaGACCCACAGTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTTVFTA*THSGLF
Trigger: GAAGAGGCCACTGTGGGTCCAAGCAGTGAAGACAGT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGGTTCATTCAATAGCTaGGTGCTTCCAGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGGSFNS*VLPEPS
Trigger: CGAAGGCTCTGGAAGCACCCAGCTATTGAATGAACC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTCTCCTTTATGTCCTaGTGGTCCTTTGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGFSFMS*WSFGPH
Trigger: ATGGGGCCCAAAGGACCACCAGGACATAAAGGAGAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTGGCATTTTGCAGTGTaGTCGGACGGGTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGWHFAV*SDGYWE
Trigger: TTCCCAATACCCGTCCGACCACACTGCAAAATGCCA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAACTGTCTCCCCTTTTTaGCCAGCCGGGCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSTVSPF*PAGPGF
Trigger: AAATCCAGGCCCGGCTGGCCAAAAAGGGGAGACAGT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAGAATGCTCGGTAGGTaGACAACAGTCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTRMLGR*TTVLQL
Trigger: GAGCTGCAGGACTGTTGTCCACCTACCGAGCATTCT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGAATGCTCGGTAGGTaGACAACAGTCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVRMLGR*TTVLQL
Trigger: GAGCTGCAGGACTGTTGTCCACCTACCGAGCATTCT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCAGCTGTATGCTTTCTaGTCCAGAATCTTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGQLYAF*SRIFPV
Trigger: CACGGGGAAGATTCTGGACCAGAAAGCATACAGCTG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGTGTGTCATTCAGGATaGCCCCTTTGCCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGVCHSG*PLCLVW
Trigger: CCAAACAAGGCAAAGGGGCCATCCTGAATGACACAC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATCACCATCCACAGAATaGACCCCCTCCAGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSPSTE*TPSSVS
Trigger: TGACACACTGGAGGGGGTTCATTCTGTGGATGGTGA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACTCTTTGAGCTGGAGTaGTCCATCTTTCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTLFELE*SIFQEP
Trigger: TGGCTCCTGAAAGATGGATCACTCCAGCTCAAAGAG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAACCCTTTTCACCAACTaGGCCATTAGGCCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSTLFTN*AIRPSC
Trigger: GCAAGAGGGCCTAATGGCTCAGTTGGTGAAAAGGGT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCTCCTTTCTCTCCTTTaGGACCAATTGCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLLSLL*DQLQPL
Trigger: CAACGGCTGCAATTGGTCTCAAAGGAGAGAAAGGAG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGCCTGCTTGAAGCACTaGAAATCAGCTCGAATGTCC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTACLKH*KSARMS
Trigger: GGACATTCGAGCTGATTTTCAGTGCTTCAAGCAGGC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGCCTGCTTGAAGCACTaGAAATCAGCTCGAATGTCC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVACLKH*KSARMS
Trigger: GGACATTCGAGCTGATTTTCAGTGCTTCAAGCAGGC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAAAGTACTTGGCCCTTaGGGTTCACTATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVKVLGP*GSLWEG
Trigger: GCCTTCCCATAGTGAACCTCAAGGGCCAAGTACTTT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAAAGTACTTGGCCCTTaGGGTTCACTATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTKVLGP*GSLWEG
Trigger: GCCTTCCCATAGTGAACCTCAAGGGCCAAGTACTTT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTAAACTGTCTTCACTaGTTGGACCCACAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLNCLH*LDPQWP
Trigger: AGGCCACTGTGGGTCCAAGCAGTGAAGACAGTTTAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACTCCTCTGTTGTGGCTaGTGCCAAGTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTLLCCG*CQVFFI
Trigger: GATGAAGAAGACTTGGCAGCAGCCACAACAGAGGAG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGTAAGCCTCTGTTaGCAGGGTCACCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSQVSLC*QGHPFH
Trigger: GTGAAAAGGGTGACCCTGGCAACAGAGGCTTACCTG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCATTCAATAGCTGGGTaGTTCCAGAGCCTTCGGTAT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGHSIAG*FQSLRY
Trigger: ATACCGAAGGCTCTGGAAGCACCCAGCTATTGAATG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCCTTTGAGACCAATTaGAGCCGTTGGTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSFETN*SRWSGE
Trigger: CTCTCCAGACCAACGGCTGCAATTGGTCTCAAAGGA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGGGATGCGTTCACACTaGTGGGGTTTCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSGMRSH*WGFLQN
Trigger: ATTCTGCAGGAAACCCCAGCAGTGTGAACGCATCCC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATTCATTATCTGGACCTaGAGTGACCCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTFIIWT*SDPFLW
Trigger: CCAGAGGAAGGGGTCACTCCAGGTCCAGATAATGAA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAACTGTCTTCACTGCTTaGACCCACAGTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSTVFTA*THSGLF
Trigger: GAAGAGGCCACTGTGGGTCCAAGCAGTGAAGACAGT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGGTTCATTCAATAGCTaGGTGCTTCCAGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTGSFNS*VLPEPS
Trigger: CGAAGGCTCTGGAAGCACCCAGCTATTGAATGAACC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAACCAATTGCAGCCGTTaGTCTGGAGAGTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTTNCSR*SGEFGF
Trigger: GAACCCAAACTCTCCAGACCAACGGCTGCAATTGGT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCTGCATAATGACCCCTaGATCTCCTTTGGTACCCTT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLHNDP*ISFGTL
Trigger: AAGGGTACCAAAGGAGATCCAGGGGTCATTATGCAG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCAGCTGTATGCTTTCTaGTCCAGAATCTTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVQLYAF*SRIFPV
Trigger: CACGGGGAAGATTCTGGACCAGAAAGCATACAGCTG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
3UTR CAA 72 bp ATGCAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTaGCTCTTAACCTATGTTGGGATGCGTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: MQWQNAMAFVFN*LLTYVGMRSHC
Trigger: GCAGTGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCCTCAAAAGTACTaGGGGACACTTCGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSHPQKY*GTLRLQ
Trigger: CTGCAACCGAAGTGTCCCTCAGTACTTTTGAGGATG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACTCTTTGAGCTGGAGTaGTCCATCTTTCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLFELE*SIFQEP
Trigger: TGGCTCCTGAAAGATGGATCACTCCAGCTCAAAGAG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCCCACATGTTCTCTTTaGGCTGGAGTGATCCATCTT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVPTCSL*AGVIHL
Trigger: AAGATGGATCACTCCAGCTCAAAGAGAACATGTGGG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACCCACATGTTCTCTTTaGGCTGGAGTGATCCATCTT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTPTCSL*AGVIHL
Trigger: AAGATGGATCACTCCAGCTCAAAGAGAACATGTGGG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAATCCAGGGGGTCCCATaGAAACATCAGTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSIQGVP*KHQFLV
Trigger: AACCAGGAACTGATGTTTTCATGGGACCCCCTGGAT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATCTGGACTCCCAGGATaGGCAGTATCAACTGGCATT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSGLPG*AVSTGI
Trigger: AATGCCAGTTGATACTGCTCATCCTGGGAGTCCAGA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTCTCCTTTAACACCGTaGAAAGTGATGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSPLTP*KVMSSG
Trigger: TCCAGAGCTCATCACTTTTCACGGTGTTAAAGGAGA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTTGGAATATGCATATTaGACTGACCTCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLEYAY*TDLRGQ
Trigger: CTGGCCACGGAGGTCAGTTCAATATGCATATTCCAA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGAGGATATAACTGTCTaGAGGATGCAGTGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGEDITV*RMQWQN
Trigger: ATTCTGCCACTGCATCCTTCAGACAGTTATATCCTC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTATGGGTTCAACTTTTaGTTCTTTGGGCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGYGFNF*FFGRGL
Trigger: CAAGCCTCGCCCAAAGAAGCAAAAGTTGAACCCATA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATTAAACTGTCTTCACTaGTTGGACCCACAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTLNCLH*LDPQWP
Trigger: AGGCCACTGTGGGTCCAAGCAGTGAAGACAGTTTAA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATATCAACTGGCATTTTaGAGTGTGGTCGGACGGGTA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTYQLAF*SVVGRV
Trigger: TACCCGTCCGACCACACTGCAAAATGCCAGTTGATA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGAAGGCTGTATCTCTCTaGTTTCCTCACAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGKAVSL*FPHNGG
Trigger: TCCACCATTGTGAGGAAAGCAGAGAGATACAGCCTT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTCAAAGGGGGAGGATaGAGTTGGAGGTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGFKGGG*SWRCVY
Trigger: ATAAACACACCTCCAACTCCATCCTCCCCCTTTGAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTTGCAGCCGTTGGTCTaGAGAGTTTGGGTTCATTCA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLQPLV*RVWVHS
Trigger: TGAATGAACCCAAACTCTCCAGACCAACGGCTGCAA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAACCAATTGCAGCCGTTaGTCTGGAGAGTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSTNCSR*SGEFGF
Trigger: GAACCCAAACTCTCCAGACCAACGGCTGCAATTGGT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCACCAGTGTCACCTTTTaGTCCTCTAGGACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVTSVTF*SSRTWK
Trigger: TTTCCAGGTCCTAGAGGACCAAAAGGTGACACTGGT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAACCAGTGTCACCTTTTaGTCCTCTAGGACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTTSVTF*SSRTWK
Trigger: TTTCCAGGTCCTAGAGGACCAAAAGGTGACACTGGT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTGGTCGGACGGGTATTaGGAAAATGGCTCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVWSDGY*ENGSFD
Trigger: ATCAAAGGAGCCATTTTCCCAATACCCGTCCGACCA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATGGTCGGACGGGTATTaGGAAAATGGCTCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTWSDGY*ENGSFD
Trigger: ATCAAAGGAGCCATTTTCCCAATACCCGTCCGACCA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATGGCATTTTGCAGTGTaGTCGGACGGGTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSWHFAV*SDGYWE
Trigger: TTCCCAATACCCGTCCGACCACACTGCAAAATGCCA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAAAAGTGATGAGCTCTaGACTCCCAGGATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVKSDEL*TPRMSS
Trigger: ACTGCTCATCCTGGGAGTCCAGAGCTCATCACTTTT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGAATGTCCCCAGAAAATaGCATGTTCAGAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGNVPRK*HVQSSQ
Trigger: TTGGCTGCTCTGAACATGCCATTTTCTGGGGACATT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCTTTCCTCACAATGGTaGACAGATCTTGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLSSQW*TDLANG
Trigger: CCCATTTGCAAGATCTGTCCACCATTGTGAGGAAAG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATGCCAAATGACTTTCTaGGGCCAAGAAGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTCQMTF*GQEGSV
Trigger: GACAGATCCTTCTTGGCCCCAGAAAGTCATTTGGCA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGCTCTTAACCTATGTTaGGATGCGTTCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVALNLC*DAFTLL
Trigger: CAGCAGTGTGAACGCATCCCAACATAGGTTAAGAGC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGAGTGGCAGAATGCCATaGCCTTTGTTTTCAACTTGC +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSGRMP*PLFSTC
Trigger: GCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTCTCCTTTAACACCGTaGAAAGTGATGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSPLTP*KVMSSG
Trigger: TCCAGAGCTCATCACTTTTCACGGTGTTAAAGGAGA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACTCATAATTGGCACTTaGAATAGGGTTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTLIIGT*NRVWWR
Trigger: CCTCCACCAAACCCTATTTCAAGTGCCAATTATGAG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATTGGAATATGCATATTaGACTGACCTCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLEYAY*TDLRGQ
Trigger: CTGGCCACGGAGGTCAGTTCAATATGCATATTCCAA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGAGGATATAACTGTCTaGAGGATGCAGTGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTEDITV*RMQWQN
Trigger: ATTCTGCCACTGCATCCTTCAGACAGTTATATCCTC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATATGGGTTCAACTTTTaGTTCTTTGGGCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTYGFNF*FFGRGL
Trigger: CAAGCCTCGCCCAAAGAAGCAAAAGTTGAACCCATA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATTCAATAGCTGGGTaGTTCCAGAGCCTTCGGTAT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSHSIAG*FQSLRY
Trigger: ATACCGAAGGCTCTGGAAGCACCCAGCTATTGAATG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATATCAACTGGCATTTTaGAGTGTGGTCGGACGGGTA +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSYQLAF*SVVGRV
Trigger: TACCCGTCCGACCACACTGCAAAATGCCAGTTGATA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCATCCATGTTGCTGAATaGTGTGACCAGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVIHVAE*CDQVSG
Trigger: TCCAGAAACCTGGTCACAGCATTCAGCAACATGGAT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAACCAAATGCGCTTTCTaGAGCATGTCATCCATGTTG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTTKCAF*SMSSML
Trigger: CAACATGGATGACATGCTGCAGAAAGCGCATTTGGT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCCTTCTATAACCAAATaGGCTTTCTGCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGPSITK*AFCSMS
Trigger: TGACATGCTGCAGAAAGCGCATTTGGTTATAGAAGG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAAGGCTGTATCTCTCTaGTTTCCTCACAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVKAVSL*FPHNGG
Trigger: TCCACCATTGTGAGGAAAGCAGAGAGATACAGCCTT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGAAAACATCAGTTCCTaGTTTTCCTGGAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVENISS*FSWNPR
Trigger: CCTGGGATTCCAGGAAAACCAGGAACTGATGTTTTC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGAAAACATCAGTTCCTaGTTTTCCTGGAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTENISS*FSWNPR
Trigger: CCTGGGATTCCAGGAAAACCAGGAACTGATGTTTTC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTTGGTCTGGAGAGTTTaGGTTCATTCAATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLVWRV*VHSIAG
Trigger: CCCAGCTATTGAATGAACCCAAACTCTCCAGACCAA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACTGCATAATGACCCCTaGATCTCCTTTGGTACCCTT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLHNDP*ISFGTL
Trigger: AAGGGTACCAAAGGAGATCCAGGGGTCATTATGCAG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCATGAGCAGTATCAACTaGCATTTTGCAGTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVMSSIN*HFAVWS
Trigger: CGACCACACTGCAAAATGCCAGTTGATACTGCTCAT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAAAAGTGATGAGCTCTaGACTCCCAGGATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSKSDEL*TPRMSS
Trigger: ACTGCTCATCCTGGGAGTCCAGAGCTCATCACTTTT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAATGTCCCCAGAAAATaGCATGTTCAGAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVNVPRK*HVQSSQ
Trigger: TTGGCTGCTCTGAACATGCCATTTTCTGGGGACATT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCTGCTTTCCTCACAATaGTGGACAGATCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLLSSQ*WTDLAN
Trigger: ATTTGCAAGATCTGTCCACCATTGTGAGGAAAGCAG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATGCCAAATGACTTTCTaGGGCCAAGAAGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSCQMTF*GQEGSV
Trigger: GACAGATCCTTCTTGGCCCCAGAAAGTCATTTGGCA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGCTCTTAACCTATGTTaGGATGCGTTCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSALNLC*DAFTLL
Trigger: CAGCAGTGTGAACGCATCCCAACATAGGTTAAGAGC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACTCATAATTGGCACTTaGAATAGGGTTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLIIGT*NRVWWR
Trigger: CCTCCACCAAACCCTATTTCAAGTGCCAATTATGAG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCATATGCATATTGAACTaGCCTCCGTGGCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVICILN*PPWPEK
Trigger: TTTTTCTGGCCACGGAGGTCAGTTCAATATGCATAT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGAACAGCAGTTGCAAATaGTGGATGTACGTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGNSSCK*WMYVKE
Trigger: TTCTTTCACGTACATCCATCATTTGCAACTGCTGTT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAATCCATGTTGCTGAATaGTGTGACCAGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSIHVAE*CDQVSG
Trigger: TCCAGAAACCTGGTCACAGCATTCAGCAACATGGAT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAACCAAATGCGCTTTCTaGAGCATGTCATCCATGTTG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSTKCAF*SMSSML
Trigger: CAACATGGATGACATGCTGCAGAAAGCGCATTTGGT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATTCAAAGGGGGAGGATaGAGTTGGAGGTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSFKGGG*SWRCVY
Trigger: ATAAACACACCTCCAACTCCATCCTCCCCCTTTGAA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAATGTTCTCTTTGAGCTaGAGTGATCCATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTMFSLS*SDPSFR
Trigger: CCTGAAAGATGGATCACTCCAGCTCAAAGAGAACAT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCATGTTCTCTTTGAGCTaGAGTGATCCATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVMFSLS*SDPSFR
Trigger: CCTGAAAGATGGATCACTCCAGCTCAAAGAGAACAT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATTGGTCTGGAGAGTTTaGGTTCATTCAATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLVWRV*VHSIAG
Trigger: CCCAGCTATTGAATGAACCCAAACTCTCCAGACCAA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAATGAGCAGTATCAACTaGCATTTTGCAGTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSMSSIN*HFAVWS
Trigger: CGACCACACTGCAAAATGCCAGTTGATACTGCTCAT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGACAGATCTTGCAAATaGGAAGATAAGAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTDRSCK*EDKNAR
Trigger: CCGAGCATTCTTATCTTCCCATTTGCAAGATCTGTC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACTTTCCTCACAATGGTaGACAGATCTTGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLSSQW*TDLANG
Trigger: CCCATTTGCAAGATCTGTCCACCATTGTGAGGAAAG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCTGCTTTCCTCACAATaGTGGACAGATCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLLSSQ*WTDLAN
Trigger: ATTTGCAAGATCTGTCCACCATTGTGAGGAAAGCAG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAGTGGCAGAATGCCATaGCCTTTGTTTTCAACTTGC +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSGRMP*PLFSTC
Trigger: GCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAATATGCATATTGAACTaGCCTCCGTGGCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSICILN*PPWPEK
Trigger: TTTTTCTGGCCACGGAGGTCAGTTCAATATGCATAT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATTTTGTCTTTGATCTaGGTCCTCTATGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGILSLI*VLYVFS
Trigger: ACTGAAGACATAGAGGACTCAGATCAAAGACAAAAT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAACAGCAGTTGCAAATaGTGGATGTACGTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTNSSCK*WMYVKE
Trigger: TTCTTTCACGTACATCCATCATTTGCAACTGCTGTT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAATTAGCACAGCTGTATaGTTTCTGGTCCAGAATCTT +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTISTAV*FLVQNL
Trigger: AAGATTCTGGACCAGAAAGCATACAGCTGTGCTAAT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTGGAGGTGTGTTTATaGGTTCAACTTTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLEVCL*VQLLLL
Trigger: AAGAAGCAAAAGTTGAACCCATAAACACACCTCCAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGACAGATCTTGCAAATaGGAAGATAAGAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSDRSCK*EDKNAR
Trigger: CCGAGCATTCTTATCTTCCCATTTGCAAGATCTGTC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCATTTTGTCTTTGATCTaGGTCCTCTATGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVILSLI*VLYVFS
Trigger: ACTGAAGACATAGAGGACTCAGATCAAAGACAAAAT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAACAAATAGGATCATTTaGGCAGTCCTGTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSTNRII*AVLFLC
Trigger: ACACAGAAACAGGACTGCTCAAATGATCCTATTTGT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGAAAATTCATCTCTATaGACCTGTTTGTTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTENSSL*TCLFQS
Trigger: CGACTGAAACAAACAGGTTCATAGAGATGAATTTTC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR TCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGAAAATTCATCTCTATaGACCTGTTTGTTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVENSSL*TCLFQS
Trigger: CGACTGAAACAAACAGGTTCATAGAGATGAATTTTC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR GCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAATTAGCACAGCTGTATaGTTTCTGGTCCAGAATCTT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSISTAV*FLVQNL
Trigger: AAGATTCTGGACCAGAAAGCATACAGCTGTGCTAAT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTATTAAAAAGTACTTaGCCCTTGAGGTTCACTATG +
Preference number: 4 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLLKST*PLRFTM
Trigger: CATAGTGAACCTCAAGGGCCAAGTACTTTTTAATAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATTGGAGGTGTGTTTATaGGTTCAACTTTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLEVCL*VQLLLL
Trigger: AAGAAGCAAAAGTTGAACCCATAAACACACCTCCAA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CCA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTTATTAAAAAGTACTTaGCCCTTGAGGTTCACTATG +
Preference number: 4 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLLKST*PLRFTM
Trigger: CATAGTGAACCTCAAGGGCCAAGTACTTTTTAATAA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
3UTR CAA 72 bp AACCTGTTTGTTTCAGTCGCAGTTATAATTCAACAATaGCCAAATGGAAGTCATAAAATTGTGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: NLFVSVAVIIQQ*PNGSHKIVGWG
Trigger: CCCCCACCCCACAATTTTATGACTTCCATTTGGCAATTGTTGAATTATAACTGCGACTGAAACAAACAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 90 bp GGTCTGCGGAGCCCCGGAAGGCGCGCGGCTAGTCGAGCAGAGCGTTaGAGCTTAGCGGAGGACGAAGGGTCGCTGAGCGCTGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GLRSPGRRAASRAER*SLAEDEGSLSAGRR
Trigger: GCGGCGGCCAGCGCTCAGCGACCCTTCGTCCTCCGCTAAGCTCCAACGCTCTGCTCGACTAGCCGCGCGCCTTCCGGGGCTCCGCAGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375001.8
ENST00000467052.1
ENST00000471477.1
ENST00000610452.1
CDS GCA 90 bp TGCGCTCGCCTCTGCTGCCTCCACCCGCGGCTGCCTTATGTAACCTaGGAGGAAAGCCCCGCGCCCGCGTTCGTTGGGGCAAGCGGGATG +
Preference number: 5 (lower is better)
Translates to: CARLCCLHPRLPYVT*EESPAPAFVGASGM
Trigger: CATCCCGCTTGCCCCAACGAACGCGGGCGCGGGGCTTTCCTCGCAGGTTACATAAGGCAGCCGCGGGTGGAGGCAGCAGAGGCGAGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471477.1
CDS CCA 90 bp AGCAGAGCGTTGGAGCTTAGCGGAGGACGAAGGGTCGCTGAGCGCTaGCCGCCGCGCTCGCCCTTCCTGCAGGGAACAAAGGCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: SRALELSGGRRVAER*PPRSPFLQGTKAAL
Trigger: GAGCGCCGCCTTTGTTCCCTGCAGGAAGGGCGAGCGCGGCGGCCAGCGCTCAGCGACCCTTCGTCCTCCGCTAAGCTCCAACGCTCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS GCA 90 bp GGACATAGAGAGGGTTGGTCCCCCGGTGGGCACACTGCTGGCCTCTaGTTCTCCAGCAGTGCTGATGGGCACCTCGGCCAGCCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: GHREGWSPGGHTAGL*FSSSADGHLGQPRC
Trigger: GCAGCGGGGCTGGCCGAGGTGCCCATCAGCACTGCTGGAGAAGCAGAGGCCAGCAGTGTGCCCACCGGGGGACCAACCCTCTCTATGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 90 bp AGCAGAGCGTTGGAGCTTAGCGGAGGACGAAGGGTCGCTGAGCGCTaGCCGCCGCGCTCGCCCTTCCTTGCCTGCCCCCTTCATCAGAAT +
Preference number: 5 (lower is better)
Translates to: SRALELSGGRRVAER*PPRSPFLACPLHQN
Trigger: ATTCTGATGAAGGGGGCAGGCAAGGAAGGGCGAGCGCGGCGGCCAGCGCTCAGCGACCCTTCGTCCTCCGCTAAGCTCCAACGCTCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467052.1
CDS CCA 90 bp GCTGCCTTATGTAACCTGCGAGGAAAGCCCCGCGCCCGCGTTCGTTaGGGCAAGCGGGATGGGCTCCCTCCCGCCCTTAAGTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: AALCNLRGKPRARVR*GKRDGLPPALKSVL
Trigger: CAGGACAGACTTAAGGGCGGGAGGGAGCCCATCCCGCTTGCCCCAACGAACGCGGGCGCGGGGCTTTCCTCGCAGGTTACATAAGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471477.1
CDS TCA 90 bp CAGCCTCTTGGGACACATGGGAGCCTGGCTCCGTGTAGTAGAGGATaGTCCGCTGGTGGCCGTCCTCCACACCTGAGAGCCGCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: QPLGTHGSLAPCSRG*SAGGRPPHLRAAGP
Trigger: TGGGCCTGCGGCTCTCAGGTGTGGAGGACGGCCACCAGCGGATCATCCTCTACTACACGGAGCCAGGCTCCCATGTGTCCCAAGAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS GCA 90 bp CAGCGGGGAGGCAAGTCCCGTGACCGCTGTGTCCGCGGTTCGCCATaGTTCACAGTAGTTATCCACAAGGCGGACGCCATGGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: QRGGKSRDRCVRGSP*FTVVIHKADAMGAG
Trigger: TCCAGCCCCCATGGCGTCCGCCTTGTGGATAACTACTGTGAAGCATGGCGAACCGCGGACACAGCGGTCACGGGACTTGCCTCCCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 90 bp TGGAGTGACCCCTTCCTCTGGGTTCTCCGTGGACATAGAGAGGGTTaGTCCCCCGGTGGGCACACTGCTGGCCTCTGCTTCTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: WSDPFLWVLRGHREG*SPGGHTAGLCFSSS
Trigger: ACTGCTGGAGAAGCAGAGGCCAGCAGTGTGCCCACCGGGGGACCAACCCTCTCTATGTCCACGGAGAACCCAGAGGAAGGGGTCACTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS TCA 90 bp CTCCGTGTAGTAGAGGATGATCCGCTGGTGGCCGTCCTCCACACCTaGGAGCCGCAGGCCCAGGTAGATGACCTTCTGGAAGGCGTCAGT +
Preference number: 5 (lower is better)
Translates to: LRVVEDDPLVAVLHT*EPQAQVDDLLEGVS
Trigger: ACTGACGCCTTCCAGAAGGTCATCTACCTGGGCCTGCGGCTCTCAGGTGTGGAGGACGGCCACCAGCGGATCATCCTCTACTACACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS GCA 90 bp CGCTGGACTCAAAAGCCAAAGCCTGGGAGGACCGCTGGAAGGGGATaGGGCTGTGCTCCTCACAGTTCACGAGGAGGGTCACTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: RWTQKPKPGRTAGRG*GCAPHSSRGGSLPH
Trigger: GTGAGGAAGTGACCCTCCTCGTGAACTGTGAGGAGCACAGCCGCATCCCCTTCCAGCGGTCCTCCCAGGCTTTGGCTTTTGAGTCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS TCA 90 bp TCTGGTCCAGAATCTTCCCCGTGCTCAGCGGGGAGGCAAGTCCCGTaGCCGCTGTGTCCGCGGTTCGCCATGCTTCACAGTAGTTATCCA +
Preference number: 5 (lower is better)
Translates to: SGPESSPCSAGRQVP*PLCPRFAMLHSSYP
Trigger: TGGATAACTACTGTGAAGCATGGCGAACCGCGGACACAGCGGTCACGGGACTTGCCTCCCCGCTGAGCACGGGGAAGATTCTGGACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 90 bp TCAAAAGCCAAAGCCTGGGAGGACCGCTGGAAGGGGATGCGGCTGTaGTCCTCACAGTTCACGAGGAGGGTCACTTCCTCACCCTGGACA +
Preference number: 5 (lower is better)
Translates to: SKAKAWEDRWKGMRL*SSQFTRRVTSSPWT
Trigger: TGTCCAGGGTGAGGAAGTGACCCTCCTCGTGAACTGTGAGGAGCACAGCCGCATCCCCTTCCAGCGGTCCTCCCAGGCTTTGGCTTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS CCA 90 bp CGGCTGTGCTCCTCACAGTTCACGAGGAGGGTCACTTCCTCACCCTaGACAATCATGGCGAAGCGGTTCCACCTGTGGGTCATCACAGGC +
Preference number: 5 (lower is better)
Translates to: RLCSSQFTRRVTSSP*TIMAKRFHLWVITG
Trigger: GCCTGTGATGACCCACAGGTGGAACCGCTTCGCCATGATTGTCCAGGGTGAGGAAGTGACCCTCCTCGTGAACTGTGAGGAGCACAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS GCA 90 bp CTCTTCACCCCCAGCTGTGATGAGGGGCTCCTCTGTTGTGGCTGCTaGCAAGTCTTCTTCATCACCAGGACCAGAAGTGACTGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: LFTPSCDEGLLCCGC*QVFFITRTRSDCPL
Trigger: GAGCGGGCAGTCACTTCTGGTCCTGGTGATGAAGAAGACTTGGCAGCAGCCACAACAGAGGAGCCCCTCATCACAGCTGGGGGTGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 90 bp GGACTCTTCACCCCCAGCTGTGATGAGGGGCTCCTCTGTTGTGGCTaGTGCCAAGTCTTCTTCATCACCAGGACCAGAAGTGACTGCCCG +
Preference number: 5 (lower is better)
Translates to: GLFTPSCDEGLLCCG*CQVFFITRTRSDCP
Trigger: CGGGCAGTCACTTCTGGTCCTGGTGATGAAGAAGACTTGGCAGCAGCCACAACAGAGGAGCCCCTCATCACAGCTGGGGGTGAAGAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 90 bp GTCACTTCCTCACCCTGGACAATCATGGCGAAGCGGTTCCACCTGTaGGTCATCACAGGCACCGAGAAGGCAGCAGCCTCTTGGGACACA +
Preference number: 5 (lower is better)
Translates to: VTSSPWTIMAKRFHL*VITGTEKAAASWDT
Trigger: TGTGTCCCAAGAGGCTGCTGCCTTCTCGGTGCCTGTGATGACCCACAGGTGGAACCGCTTCGCCATGATTGTCCAGGGTGAGGAAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS CCA 90 bp CCTCACAGTTCACGAGGAGGGTCACTTCCTCACCCTGGACAATCATaGCGAAGCGGTTCCACCTGTGGGTCATCACAGGCACCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: PHSSRGGSLPHPGQS*RSGSTCGSSQAPRR
Trigger: CCTTCTCGGTGCCTGTGATGACCCACAGGTGGAACCGCTTCGCCATGATTGTCCAGGGTGAGGAAGTGACCCTCCTCGTGAACTGTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS CCA 90 bp GCATTGCCCATGAAGATTCCAGCGCTGGACTCAAAAGCCAAAGCCTaGGAGGACCGCTGGAAGGGGATGCGGCTGTGCTCCTCACAGTTC +
Preference number: 5 (lower is better)
Translates to: ALPMKIPALDSKAKA*EDRWKGMRLCSSQF
Trigger: GAACTGTGAGGAGCACAGCCGCATCCCCTTCCAGCGGTCCTCCCAGGCTTTGGCTTTTGAGTCCAGCGCTGGAATCTTCATGGGCAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS TCA 90 bp CTCCCTCAGGAACACAGGACCACTCATTTAGAGGAAAGTGTGCTCTaGAATGTGCCCCAGGTCTTGGAGCAGCCAAGCCGGGGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LPQEHRTTHLEESVL*NVPQVLEQPSRGWS
Trigger: GCTCCAGCCCCGGCTTGGCTGCTCCAAGACCTGGGGCACATTTCAGAGCACACTTTCCTCTAAATGAGTGGTCCTGTGTTCCTGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496686.1
CDS TCA 90 bp CATTCAGGATCTCACCAGACCCTTGTTTGGGGCTGCTGTGCTGGATaGTGCTCATGTTGGTGGTTTCCAGGGTCCCCTCGGGTACAGGTT +
Preference number: 5 (lower is better)
Translates to: HSGSHQTLVWGCCAG*CSCWWFPGSPRVQV
Trigger: AACCTGTACCCGAGGGGACCCTGGAAACCACCAACATGAGCATCATCCAGCACAGCAGCCCCAAACAAGGGTCTGGTGAGATCCTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375001.8
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCCCAGGAGGGCCAGCTaGTCCCTTTTTCCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGPRRAS*SLFPRG
Trigger: CCCCCGGGGAAAAAGGGACAAGCTGGCCCTCCTGGG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 90 bp GGTGATATTGATCAAGGAATTAGACAAGACCTTGATGTGCCCAGGTaGCCCTCTCGGCCCAGGGGGTCCCACAATACTGGCTCCATCCAT +
Preference number: 5 (lower is better)
Translates to: GDIDQGIRQDLDVPR*PSRPRGSHNTGSIH
Trigger: ATGGATGGAGCCAGTATTGTGGGACCCCCTGGGCCGAGAGGGCCACCTGGGCACATCAAGGTCTTGTCTAATTCCTTGATCAATATCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCCCAGGAGGGCCAGCTaGTCCCTTTTTCCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVPRRAS*SLFPRG
Trigger: CCCCCGGGGAAAAAGGGACAAGCTGGCCCTCCTGGG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 90 bp TCGATACATAGGACAATTAGCCGATTAGCACAGCTGTATGCTTTCTaGTCCAGAATCTTCCCCGTGCTCAGCGGGGAGGCAAGTCCCGTG +
Preference number: 5 (lower is better)
Translates to: SIHRTISRLAQLYAF*SRIFPVLSGEASPV
Trigger: CACGGGACTTGCCTCCCCGCTGAGCACGGGGAAGATTCTGGACCAGAAAGCATACAGCTGTGCTAATCGGCTAATTGTCCTATGTATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGCTGGGCGGCCAACATaGGCACCAGGCCCGAAACTG +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVAGRPT*APGPKL
Trigger: CAGTTTCGGGCCTGGTGCCAATGTTGGCCGCCCAGC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGTCCTTTGGGCCCCATaGGTCCTGGGGCTCCATGCA +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGVLWAP*VLGLHA
Trigger: TGCATGGAGCCCCAGGACCAATGGGGCCCAAAGGAC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAGCACCTGGGGGTCCTaGGGGCCCAACGACTGTCTC +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSTWGS*GPNDCL
Trigger: GAGACAGTCGTTGGGCCCCAAGGACCCCCAGGTGCT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 90 bp TTGCAGCCGTTGGTCTGGAGAGTTTGGGTTCATTCAATAGCTGGGTaGTTCCAGAGCCTTCGGTATCCTCGAATCCAAGTCCCATTGTGC +
Preference number: 5 (lower is better)
Translates to: LQPLVWRVWVHSIAG*FQSLRYPRIQVPLC
Trigger: GCACAATGGGACTTGGATTCGAGGATACCGAAGGCTCTGGAAGCACCCAGCTATTGAATGAACCCAAACTCTCCAGACCAACGGCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGCGAATCCAAGTCCCATaGTGCATCCAGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGRIQVP*CIQGLG
Trigger: CCCCAGGCCCTGGATGCACAATGGGACTTGGATTCG...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGTCCTTTGGGCCCCATaGGTCCTGGGGCTCCATGCA +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVVLWAP*VLGLHA
Trigger: TGCATGGAGCCCCAGGACCAATGGGGCCCAAAGGAC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAGCACCTGGGGGTCCTaGGGGCCCAACGACTGTCTC +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSTWGS*GPNDCL
Trigger: GAGACAGTCGTTGGGCCCCAAGGACCCCCAGGTGCT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 90 bp CCAATTGCAGCCGTTGGTCTGGAGAGTTTGGGTTCATTCAATAGCTaGGTGCTTCCAGAGCCTTCGGTATCCTCGAATCCAAGTCCCATT +
Preference number: 5 (lower is better)
Translates to: PIAAVGLESLGSFNS*VLPEPSVSSNPSPI
Trigger: AATGGGACTTGGATTCGAGGATACCGAAGGCTCTGGAAGCACCCAGCTATTGAATGAACCCAAACTCTCCAGACCAACGGCTGCAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGCCCGTTGTTCCTCCTaGGTGCCATCTCGCGGGTCT +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSARCSS*VPSRGS
Trigger: AGACCCGCGAGATGGCACCAAGGAGGAACAACGGGC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGATCTCACCAGACCCTaGTTTGGGGCTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGDLTRP*FGAAVL
Trigger: CAGCACAGCAGCCCCAAACAAGGGTCTGGTGAGATC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375001.8
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACGAATCCAAGTCCCATaGTGCATCCAGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTRIQVP*CIQGLG
Trigger: CCCCAGGCCCTGGATGCACAATGGGACTTGGATTCG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGCCCCTTTGCCTTGTTaGGGGCTGCTGTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTAPLPC*GLLCWM
Trigger: CATCCAGCACAGCAGCCCCAAACAAGGCAAAGGGGC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGATGGCCCCTTTGCCTaGTTTGGGGCTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTDGPFA*FGAAVL
Trigger: CAGCACAGCAGCCCCAAACAAGGCAAAGGGGCCATC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTCAGGATGGCCCCTTaGCCTTGTTTGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGFRMAP*PCLGLL
Trigger: CAGCAGCCCCAAACAAGGCAAAGGGGCCATCCTGAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACCAGCACTGCCCGTaGTTCCTCCTTGGTGCCATC +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSHQHCP*FLLGAI
Trigger: GATGGCACCAAGGAGGAACAACGGGCAGTGCTGGTG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTCTTTGGGCGAGGCTaGAGTGTAGGTGACGGCTTC +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGFFGRG*SVGDGF
Trigger: GAAGCCGTCACCTACACTCAAGCCTCGCCCAAAGAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCACCAGACCCTTGTTaGGGGCTGCTGTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSPDPC*GLLCWM
Trigger: CATCCAGCACAGCAGCCCCAAACAAGGGTCTGGTGA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375001.8
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTCTCCTTTGGTACCCTaGAGGCCATTCAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSPLVP*RPFSPG
Trigger: CCCAGGACTGAATGGCCTCAAGGGTACCAAAGGAGA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCCCTGTAGCTCCTGCATaGCCCATGAAGATTCCAGCG +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVPVAPA*PMKIPA
Trigger: CGCTGGAATCTTCATGGGCAATGCAGGAGCTACAGG...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATGGATGATGCTCATGTaGGTGGTTTCCAGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTWMMLM*VVSRVP
Trigger: GGGGACCCTGGAAACCACCAACATGAGCATCATCCA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGAACTGTCTTCACTGCTaGGACCCACAGTGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGNCLHC*DPQWPL
Trigger: AAGAGGCCACTGTGGGTCCAAGCAGTGAAGACAGTT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACCAGGTAAGCCTCTGTaGCCAGGGTCACCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTPGKPL*PGSPFS
Trigger: TGAAAAGGGTGACCCTGGCAACAGAGGCTTACCTGG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGAATTAGACAAGACCTaGATGTGCCCAGGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGELDKT*MCPGGP
Trigger: AGGGCCACCTGGGCACATCAAGGTCTTGTCTAATTC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCACCCCTGGATCTCCTTaGGTACCCTTGAGGCCATTC +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVTPGSP*VPLRPF
Trigger: GAATGGCCTCAAGGGTACCAAAGGAGATCCAGGGGT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 90 bp GGTTCACTATGGGAAGGCTGTATCTCTCTGCTTTCCTCACAATGGTaGACAGATCTTGCAAATGGGAAGATAAGAATGCTCGGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: GSLWEGCISLLSSQW*TDLANGKIRMLGRW
Trigger: CCACCTACCGAGCATTCTTATCTTCCCATTTGCAAGATCTGTCCACCATTGTGAGGAAAGCAGAGAGATACAGCCTTCCCATAGTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 90 bp CTGGAGCTTAGGGGTTTGGCCTTTTCTTCTGCTAACCAAGAATCATaGTCAGAGTCATGGTCACAATCGTGGTCATGGTTGCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: LELRGLAFSSANQES*SESWSQSWSWLPFS
Trigger: AGAGAATGGCAACCATGACCACGATTGTGACCATGACTCTGACCATGATTCTTGGTTAGCAGAAGAAAAGGCCAAACCCCTAAGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496686.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAGGGGGAGGATGGAGTaGGAGGTGTGTTTATGGGTT +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVRGRME*EVCLWV
Trigger: AACCCATAAACACACCTCCAACTCCATCCTCCCCCT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATGGATGATGCTCATGTaGGTGGTTTCCAGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSWMMLM*VVSRVP
Trigger: GGGGACCCTGGAAACCACCAACATGAGCATCATCCA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGACCAATTGCAGCCGTaGGTCTGGAGAGTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVDQLQP*VWRVWV
Trigger: AACCCAAACTCTCCAGACCAACGGCTGCAATTGGTC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGACCAATTGCAGCCGTaGGTCTGGAGAGTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTDQLQP*VWRVWV
Trigger: AACCCAAACTCTCCAGACCAACGGCTGCAATTGGTC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATCTCCTTTGGTACCCTaGAGGCCATTCAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSPLVP*RPFSPG
Trigger: CCCAGGACTGAATGGCCTCAAGGGTACCAAAGGAGA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGTATCAACTGGCATTTaGCAGTGTGGTCGGACGGGT +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVVSTGI*QCGRTG
Trigger: ACCCGTCCGACCACACTGCAAAATGCCAGTTGATAC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAGGGGGAGGATGGAGTaGGAGGTGTGTTTATGGGTT +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSRGRME*EVCLWV
Trigger: AACCCATAAACACACCTCCAACTCCATCCTCCCCCT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACACCAGCCCCGCTGCTGTaGCTGCTAAATTCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTPAPLL*LLNSFL
Trigger: AAGAAAAGAATTTAGCAGCAACAGCAGCGGGGCTGG...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTGCAGCTGCAGCTGTaGTTAAACTGTCTTCACTGC +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLQLQL*LNCLHC
Trigger: GCAGTGAAGACAGTTTAACAACAGCTGCAGCTGCAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGGTTGGTCTGGAGAGTTaGGGTTCATTCAATAGCTGG +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGVGLES*GSFNSW
Trigger: CCAGCTATTGAATGAACCCAAACTCTCCAGACCAAC...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTCTCCTTTCTCTCCTTaGAGACCAATTGCAGCCGTT +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSPFSP*RPIAAV
Trigger: AACGGCTGCAATTGGTCTCAAAGGAGAGAAAGGAGA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGAATTAGACAAGACCTaGATGTGCCCAGGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSELDKT*MCPGGP
Trigger: AGGGCCACCTGGGCACATCAAGGTCTTGTCTAATTC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATCACCTTTGAACCCCTaGTCTCCATTCTCCCCCTTC +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSSPLNP*SPFSPF
Trigger: GAAGGGGGAGAATGGAGACAAGGGGTTCAAAGGTGA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGAAAAGTACTTGGCCCTaGAGGTTCACTATGGGAAGG +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGKSTWP*RFTMGR
Trigger: CCTTCCCATAGTGAACCTCAAGGGCCAAGTACTTTT...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTTATGGGTTCAACTTTaGCTTCTTTGGGCGAGGCTT +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGLWVQL*LLWARL
Trigger: AAGCCTCGCCCAAAGAAGCAAAAGTTGAACCCATAA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACCAGCCCCGCTGCTGTaGCTGCTAAATTCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSPAPLL*LLNSFL
Trigger: AAGAAAAGAATTTAGCAGCAACAGCAGCGGGGCTGG...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTTGCAGCTGCAGCTGTaGTTAAACTGTCTTCACTGC +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVLQLQL*LNCLHC
Trigger: GCAGTGAAGACAGTTTAACAACAGCTGCAGCTGCAA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTCCCACATGTTCTCTTaGAGCTGGAGTGATCCATCT +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSHMFS*SWSDPS
Trigger: AGATGGATCACTCCAGCTCAAAGAGAACATGTGGGA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCCCACATGTTCTCTTaGAGCTGGAGTGATCCATCT +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSHMFS*SWSDPS
Trigger: AGATGGATCACTCCAGCTCAAAGAGAACATGTGGGA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATCTCCTTTCTCTCCTTaGAGACCAATTGCAGCCGTT +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTSPFSP*RPIAAV
Trigger: AACGGCTGCAATTGGTCTCAAAGGAGAGAAAGGAGA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACATTCTCCCCCTTCAAGTaGTTCAGAAAGTGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTFSPFK*FRKCLR
Trigger: CCTGAGACACTTTCTGAACAACTTGAAGGGGGAGAA...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CAGTGGCAGAATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGTCTCCTTTTTCACCTTaGAACCCCTTGTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: QWQNAMAFVFNLLLTYVGSPFSP*NPLSPF
Trigger: GAATGGAGACAAGGGGTTCAAAGGTGAAAAAGGAGA...CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATTCTGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCAAAAGTACTTGGCCCTaGAGGTTCACTATGGGAAGG +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVKSTWP*RFTMGR
Trigger: CCTTCCCATAGTGAACCTCAAGGGCCAAGTACTTTT...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGTTGGTCTGGAGAGTTaGGGTTCATTCAATAGCTGG +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSVGLES*GSFNSW
Trigger: CCAGCTATTGAATGAACCCAAACTCTCCAGACCAAC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGGGAAAATGGCTCCTTaGATGTTAATCACAGCTCCA +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVGKMAP*MLITAP
Trigger: TGGAGCTGTGATTAACATCAAAGGAGCCATTTTCCC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATTCTCCCCCTTCAAGTaGTTCAGAAAGTGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSFSPFK*FRKCLR
Trigger: CCTGAGACACTTTCTGAACAACTTGAAGGGGGAGAA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCTCTCCTTTTTCACCTTaGAACCCCTTGTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVSPFSP*NPLSPF
Trigger: GAATGGAGACAAGGGGTTCAAAGGTGAAAAAGGAGA...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGTGTACGAACAGCAGTaGCAAATGATGGATGTACGT +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTVYEQQ*QMMDVR
Trigger: ACGTACATCCATCATTTGCAACTGCTGTTCGTACAC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp CACTGCTGGGGTTTCCTGCAGAATCTAGCACCAATATATGGATCAGATTTTGTCGTGTACGAACAGCAGTaGCAAATGATGGATGTACGT +
Preference number: 5 (lower is better)
Translates to: HCWGFLQNLAPIYGSDFVVYEQQ*QMMDVR
Trigger: ACGTACATCCATCATTTGCAACTGCTGTTCGTACAC...GACAAAATCTGATCCATATATTGGTGCTAGATTCTGCAGGAAACCCCAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCATTATGGGTTCAACTTTaGCTTCTTTGGGCGAGGCTT +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSLWVQL*LLWARL
Trigger: AAGCCTCGCCCAAAGAAGCAAAAGTTGAACCCATAA...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGGGAAAATGGCTCCTTaGATGTTAATCACAGCTCCA +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSGKMAP*MLITAP
Trigger: TGGAGCTGTGATTAACATCAAAGGAGCCATTTTCCC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAGCCTTTGTTTTCAACTaGCTCTTAACCTATGTTGGG +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTAFVFN*LLTYVG
Trigger: CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGC...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAGCCTTTGTTTTCAACTaGCTCTTAACCTATGTTGGG +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSAFVFN*LLTYVG
Trigger: CCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGC...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp TGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCACAAATCCATGGGTGATATaGATCAAGGAATTAGACAAG +
Preference number: 5 (lower is better)
Translates to: CHGLCFQLALNLCWDAFTNPWVI*IKELDK
Trigger: CTTGTCTAATTCCTTGATCAATATCACCCATGGATT...TGTGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS-3UTR CAA 90 bp AATGCCATGGCCTTTGTTTTCAACTTGCTCTTAACCTATGTTGGGATGCGTTCAAATCCATGGGTGATATaGATCAAGGAATTAGACAAG +
Preference number: 5 (lower is better)
Translates to: NAMAFVFNLLLTYVGMRSNPWVI*IKELDK
Trigger: CTTGTCTAATTCCTTGATCAATATCACCCATGGATT...TGAACGCATCCCAACATAGGTTAAGAGCAAGTTGAAAACAAAGGCCATGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 72 bp TGCCCGTTGTTCCTCCTTGGTGCCATCTCGCGGGTCTaGGGAGCCCCGGAAGGCGCGCGGCTAGTCGAGCAG +
Preference number: 6 (lower is better)
Translates to: CPLFLLGAISRV*GAPEGARLVEQ
Trigger: CTGCTCGACTAGCCGCGCGCCTTCCGGGGCTCCGCAGACCCGCGAGATGGCACCAAGGAGGAACAACGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375001.8
ENST00000467052.1
ENST00000471477.1
ENST00000610452.1
CDS GCA 72 bp CGCCCCTTTCCCCCTCGACGGACGTGCGCTCGCCTCTaGTGCCTCCACCCGCGGCTGCCTTATGTAACCTGC +
Preference number: 6 (lower is better)
Translates to: RPFPPRRTCARL*CLHPRLPYVTC
Trigger: GCAGGTTACATAAGGCAGCCGCGGGTGGAGGCAGCAGAGGCGAGCGCACGTCCGTCGAGGGGGAAAGGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471477.1
CDS CCA 72 bp TTGGAGCTTAGCGGAGGACGAAGGGTCGCTGAGCGCTaGCCGCCGCGCTCGCCCTTCCTTGCCTGCCCCCTT +
Preference number: 6 (lower is better)
Translates to: LELSGGRRVAER*PPRSPFLACPL
Trigger: AAGGGGGCAGGCAAGGAAGGGCGAGCGCGGCGGCCAGCGCTCAGCGACCCTTCGTCCTCCGCTAAGCTCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467052.1
CDS TCA 72 bp GGCAGCGGGACACCGATGAGCTGCGTGAGGTCCAGGTaGCCCTGGGAAGCAGTCTCTGTCGCACCGCGGGTC +
Preference number: 6 (lower is better)
Translates to: GSGTPMSCVRSR*PWEAVSVAPRV
Trigger: GACCCGCGGTGCGACAGAGACTGCTTCCCAGGGTCACCTGGACCTCACGCAGCTCATCGGTGTCCCGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS GCA 72 bp CTGGGGGTCCTGGAGGACCTCTCAGCAGCTGCTCACTaGCCACCAGGTCACCAGAGCCAGAGCCGACGTCCG +
Preference number: 6 (lower is better)
Translates to: LGVLEDLSAAAH*PPGHQSQSRRP
Trigger: CGGACGTCGGCTCTGGCTCTGGTGACCTGGTGGGCAGTGAGCAGCTGCTGAGAGGTCCTCCAGGACCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 72 bp CCCTTTCCCCCTCGACGGACGTGCGCTCGCCTCTGCTaGCTCCACCCGCGGCTGCCTTATGTAACCTGCGAG +
Preference number: 6 (lower is better)
Translates to: PFPPRRTCARLC*LHPRLPYVTCE
Trigger: CTCGCAGGTTACATAAGGCAGCCGCGGGTGGAGGCAGCAGAGGCGAGCGCACGTCCGTCGAGGGGGAAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471477.1
CDS CCA 72 bp AGCCCCGGAAGGCGCGCGGCTAGTCGAGCAGAGCGTTaGAGCTTAGCGGAGGACGAAGGGTCGCTGAGCGCT +
Preference number: 6 (lower is better)
Translates to: SPGRRAASRAER*SLAEDEGSLSA
Trigger: AGCGCTCAGCGACCCTTCGTCCTCCGCTAAGCTCCAACGCTCTGCTCGACTAGCCGCGCGCCTTCCGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375001.8
ENST00000467052.1
ENST00000471477.1
ENST00000610452.1
CDS CCA 72 bp CCATCTTTCAGGAGCCACTGTGGGCAGGGGCAGCGGTaGCCCATCAGGGGGAGGGCTGCCGGACTCTTCACC +
Preference number: 6 (lower is better)
Translates to: PSFRSHCGQGQR*PIRGRAAGLFT
Trigger: GGTGAAGAGTCCGGCAGCCCTCCCCCTGATGGGCCACCGCTGCCCCTGCCCACAGTGGCTCCTGAAAGATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp TGTAACCTGCGAGGAAAGCCCCGCGCCCGCGTTCGTTaGGGCAAGCGGGATGGGCTCCCTCCCGCCCTTAAG +
Preference number: 6 (lower is better)
Translates to: CNLRGKPRARVR*GKRDGLPPALK
Trigger: CTTAAGGGCGGGAGGGAGCCCATCCCGCTTGCCCCAACGAACGCGGGCGCGGGGCTTTCCTCGCAGGTTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471477.1
CDS CCA 72 bp TTGGAGCTTAGCGGAGGACGAAGGGTCGCTGAGCGCTaGCCGCCGCGCTCGCCCTTCCTGCAGGGAACAAAG +
Preference number: 6 (lower is better)
Translates to: LELSGGRRVAER*PPRSPFLQGTK
Trigger: CTTTGTTCCCTGCAGGAAGGGCGAGCGCGGCGGCCAGCGCTCAGCGACCCTTCGTCCTCCGCTAAGCTCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS GCA 72 bp TCCTCGGGAGTCCTGGGGTCGGGGTGCACGGTGAGCTaGTGGAGGGAGCCAGTGAATCTCTCGAGCCCTGTA +
Preference number: 6 (lower is better)
Translates to: SSGVLGSGCTVS*WREPVNLSSPV
Trigger: TACAGGGCTCGAGAGATTCACTGGCTCCCTCCAGCAGCTCACCGTGCACCCCGACCCCAGGACTCCCGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS TCA 72 bp GGGACACATGGGAGCCTGGCTCCGTGTAGTAGAGGATaGTCCGCTGGTGGCCGTCCTCCACACCTGAGAGCC +
Preference number: 6 (lower is better)
Translates to: GTHGSLAPCSRG*SAGGRPPHLRA
Trigger: GGCTCTCAGGTGTGGAGGACGGCCACCAGCGGATCATCCTCTACTACACGGAGCCAGGCTCCCATGTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS TCA 72 bp GAATCTTCCCCGTGCTCAGCGGGGAGGCAAGTCCCGTaGCCGCTGTGTCCGCGGTTCGCCATGCTTCACAGT +
Preference number: 6 (lower is better)
Translates to: ESSPCSAGRQVP*PLCPRFAMLHS
Trigger: ACTGTGAAGCATGGCGAACCGCGGACACAGCGGTCACGGGACTTGCCTCCCCGCTGAGCACGGGGAAGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp CCCTTCCTCTGGGTTCTCCGTGGACATAGAGAGGGTTaGTCCCCCGGTGGGCACACTGCTGGCCTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: PFLWVLRGHREG*SPGGHTAGLCF
Trigger: GAAGCAGAGGCCAGCAGTGTGCCCACCGGGGGACCAACCCTCTCTATGTCCACGGAGAACCCAGAGGAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CAA 90 bp CCAGGTGGGCCCTGCATAATGACCCCTGGATCTCCTTTGGTACCCTaGAGGCCATTCAGTCCTGGGCGACCAGGTCGCCCGGGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: PGGPCIMTPGSPLVP*RPFSPGRPGRPGRP
Trigger: TGGCCTTCCCGGGCGACCTGGTCGCCCAGGACTGAATGGCCTCAAGGGTACCAAAGGAGATCCAGGGGTCATTATGCAGGGCCCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CAA 90 bp CCAGGTAAGCCAGGTGGGCCCTGCATAATGACCCCTGGATCTCCTTaGGTACCCTTGAGGCCATTCAGTCCTGGGCGACCAGGTCGCCCG +
Preference number: 6 (lower is better)
Translates to: PGKPGGPCIMTPGSP*VPLRPFSPGRPGRP
Trigger: CGGGCGACCTGGTCGCCCAGGACTGAATGGCCTCAAGGGTACCAAAGGAGATCCAGGGGTCATTATGCAGGGCCCACCTGGCTTACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS TCA 72 bp GCCCGAAACTGTAGGCCGGGAAGCCACCATAGCCTGTaGCAAAGGATACGGACGAGGGCAGCGGGACACCGA +
Preference number: 6 (lower is better)
Translates to: ARNCRPGSHHSL*QRIRTRAAGHR
Trigger: TCGGTGTCCCGCTGCCCTCGTCCGTATCCTTTGTCACAGGCTATGGTGGCTTCCCGGCCTACAGTTTCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS GCA 72 bp GTGGAGACCGAGAGCAGCATCAGCAGACACCAGCACTaGCCGTTGTTCCTCCTTGGTGCCATCTCGCGGGTC +
Preference number: 6 (lower is better)
Translates to: VETESSISRHQH*PLFLLGAISRV
Trigger: GACCCGCGAGATGGCACCAAGGAGGAACAACGGGCAGTGCTGGTGTCTGCTGATGCTGCTCTCGGTCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS GCA 72 bp CCTTACTCCCTGCAGTGGAGGTCCTGGAGGCTCTCCTaGAGAGCCTGGGACTCCCTCAGGAACACAGGACCA +
Preference number: 6 (lower is better)
Translates to: PYSLQWRSWRLS*RAWDSLRNTGP
Trigger: TGGTCCTGTGTTCCTGAGGGAGTCCCAGGCTCTGCAGGAGAGCCTCCAGGACCTCCACTGCAGGGAGTAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496686.1
CDS GCA 72 bp AAAGCCTGGGAGGACCGCTGGAAGGGGATGCGGCTGTaGTCCTCACAGTTCACGAGGAGGGTCACTTCCTCA +
Preference number: 6 (lower is better)
Translates to: KAWEDRWKGMRL*SSQFTRRVTSS
Trigger: TGAGGAAGTGACCCTCCTCGTGAACTGTGAGGAGCACAGCCGCATCCCCTTCCAGCGGTCCTCCCAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS GCA 72 bp GGCAAGTCCCGTGACCGCTGTGTCCGCGGTTCGCCATaGTTCACAGTAGTTATCCACAAGGCGGACGCCATG +
Preference number: 6 (lower is better)
Translates to: GKSRDRCVRGSP*FTVVIHKADAM
Trigger: CATGGCGTCCGCCTTGTGGATAACTACTGTGAAGCATGGCGAACCGCGGACACAGCGGTCACGGGACTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp AATGTGCCTATTTGGCCCCCTCCTTACTCCCTGCAGTaGAGGTCCTGGAGGCTCTCCTGCAGAGCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: NVPIWPPPYSLQ*RSWRLSCRAWD
Trigger: GTCCCAGGCTCTGCAGGAGAGCCTCCAGGACCTCCACTGCAGGGAGTAAGGAGGGGGCCAAATAGGCACATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496686.1
CDS CAA 72 bp CCCTGCATAATGACCCCTGGATCTCCTTTGGTACCCTaGAGGCCATTCAGTCCTGGGCGACCAGGTCGCCCG +
Preference number: 6 (lower is better)
Translates to: PCIMTPGSPLVP*RPFSPGRPGRP
Trigger: CGGGCGACCTGGTCGCCCAGGACTGAATGGCCTCAAGGGTACCAAAGGAGATCCAGGGGTCATTATGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp TCACCCTGGACAATCATGGCGAAGCGGTTCCACCTGTaGGTCATCACAGGCACCGAGAAGGCAGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: SPWTIMAKRFHL*VITGTEKAAAS
Trigger: AGAGGCTGCTGCCTTCTCGGTGCCTGTGATGACCCACAGGTGGAACCGCTTCGCCATGATTGTCCAGGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS CCA 72 bp ATGAAGATTCCAGCGCTGGACTCAAAAGCCAAAGCCTaGGAGGACCGCTGGAAGGGGATGCGGCTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: MKIPALDSKAKA*EDRWKGMRLCS
Trigger: GGAGCACAGCCGCATCCCCTTCCAGCGGTCCTCCCAGGCTTTGGCTTTTGAGTCCAGCGCTGGAATCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS CCA 72 bp AGATCTCAGCTACTCCGTCTGCCTCCTGCAGCCCACTaGTCTCTCCAGATGCCGAGGACTCTTCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: RSQLLRLPPAAH*SLQMPRTLQGH
Trigger: GTGACCCTGAAGAGTCCTCGGCATCTGGAGAGACCAGTGGGCTGCAGGAGGCAGACGGAGTAGCTGAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CAA 72 bp CCAGGTGGGCCCTGCATAATGACCCCTGGATCTCCTTaGGTACCCTTGAGGCCATTCAGTCCTGGGCGACCA +
Preference number: 6 (lower is better)
Translates to: PGGPCIMTPGSP*VPLRPFSPGRP
Trigger: TGGTCGCCCAGGACTGAATGGCCTCAAGGGTACCAAAGGAGATCCAGGGGTCATTATGCAGGGCCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS TCA 72 bp TCTCACCAGACCCTTGTTTGGGGCTGCTGTGCTGGATaGTGCTCATGTTGGTGGTTTCCAGGGTCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: SHQTLVWGCCAG*CSCWWFPGSPR
Trigger: CCGAGGGGACCCTGGAAACCACCAACATGAGCATCATCCAGCACAGCAGCCCCAAACAAGGGTCTGGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375001.8
CDS GCA 72 bp ACGGCTTCTAAGATCTCAGCTACTCCGTCTGCCTCCTaGAGCCCACTGGTCTCTCCAGATGCCGAGGACTCT +
Preference number: 6 (lower is better)
Translates to: TASKISATPSAS*SPLVSPDAEDS
Trigger: AGAGTCCTCGGCATCTGGAGAGACCAGTGGGCTGCAGGAGGCAGACGGAGTAGCTGAGATCTTAGAAGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp TCACGAGGAGGGTCACTTCCTCACCCTGGACAATCATaGCGAAGCGGTTCCACCTGTGGGTCATCACAGGCA +
Preference number: 6 (lower is better)
Translates to: SRGGSLPHPGQS*RSGSTCGSSQA
Trigger: TGCCTGTGATGACCCACAGGTGGAACCGCTTCGCCATGATTGTCCAGGGTGAGGAAGTGACCCTCCTCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS CCA 72 bp TCCTCACAGTTCACGAGGAGGGTCACTTCCTCACCCTaGACAATCATGGCGAAGCGGTTCCACCTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: SSQFTRRVTSSP*TIMAKRFHLWV
Trigger: GACCCACAGGTGGAACCGCTTCGCCATGATTGTCCAGGGTGAGGAAGTGACCCTCCTCGTGAACTGTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375001.8
ENST00000471477.1
ENST00000610452.1
CDS CCA 72 bp CCATCAGCCTTTCCAGAGGAATGTCCTCTGTCAGGATaGCACCCGGCTCTCCCTTCTCGCCCTGTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: PSAFPEECPLSG*HPALPSRPVLL
Trigger: AAGGAGAACAGGGCGAGAAGGGAGAGCCGGGTGCCATCCTGACAGAGGACATTCCTCTGGAAAGGCTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp TTTTTGGCCAGCCGGGCCTGGATTTCCGGGCAGGCCTaGAGGCCCAGACATAAGGAAGCTGCCATTAATGTC +
Preference number: 6 (lower is better)
Translates to: FLASRAWISGQA*RPRHKEAAINV
Trigger: GACATTAATGGCAGCTTCCTTATGTCTGGGCCTCCAGGCCTGCCCGGAAATCCAGGCCCGGCTGGCCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 72 bp CCCAGCTGTGATGAGGGGCTCCTCTGTTGTGGCTGCTaGCAAGTCTTCTTCATCACCAGGACCAGAAGTGAC +
Preference number: 6 (lower is better)
Translates to: PSCDEGLLCCGC*QVFFITRTRSD
Trigger: GTCACTTCTGGTCCTGGTGATGAAGAAGACTTGGCAGCAGCCACAACAGAGGAGCCCCTCATCACAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 72 bp TTATCCACAAGGCGGACGCCATGGGGGCTGGAGCCATaGCAAATGACTTTCTGGGGCCAAGAAGGATCTGTC +
Preference number: 6 (lower is better)
Translates to: LSTRRTPWGLEP*QMTFWGQEGSV
Trigger: GACAGATCCTTCTTGGCCCCAGAAAGTCATTTGGCATGGCTCCAGCCCCCATGGCGTCCGCCTTGTGGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp CTCTTCATTATCTGGACCTGGAGTGACCCCTTCCTCTaGGTTCTCCGTGGACATAGAGAGGGTTGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LFIIWTWSDPFL*VLRGHREGWSP
Trigger: GGGGGACCAACCCTCTCTATGTCCACGGAGAACCCAGAGGAAGGGGTCACTCCAGGTCCAGATAATGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 72 bp GTGATATTGATCAAGGAATTAGACAAGACCTTGATGTaGCCAGGTGGCCCTCTCGGCCCAGGGGGTCCCACA +
Preference number: 6 (lower is better)
Translates to: VILIKELDKTLM*PGGPLGPGGPT
Trigger: TGTGGGACCCCCTGGGCCGAGAGGGCCACCTGGGCACATCAAGGTCTTGTCTAATTCCTTGATCAATATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CAA 72 bp CCATGGGTGATATTGATCAAGGAATTAGACAAGACCTaGATGTGCCCAGGTGGCCCTCTCGGCCCAGGGGGT +
Preference number: 6 (lower is better)
Translates to: PWVILIKELDKT*MCPGGPLGPGG
Trigger: ACCCCCTGGGCCGAGAGGGCCACCTGGGCACATCAAGGTCTTGTCTAATTCCTTGATCAATATCACCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS TCA 72 bp GAGCCGCTGTCAGTAATGGGGTCACCATCCACAGAATaGACCCCCTCCAGTGTGTCATTCAGGATCTCACCA +
Preference number: 6 (lower is better)
Translates to: EPLSVMGSPSTE*TPSSVSFRISP
Trigger: TGGTGAGATCCTGAATGACACACTGGAGGGGGTTCATTCTGTGGATGGTGACCCCATTACTGACAGCGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375001.8
CDS TCA 72 bp GAACACAGGACCACTCATTTAGAGGAAAGTGTGCTCTaGAATGTGCCCCAGGTCTTGGAGCAGCCAAGCCGG +
Preference number: 6 (lower is better)
Translates to: EHRTTHLEESVL*NVPQVLEQPSR
Trigger: CCGGCTTGGCTGCTCCAAGACCTGGGGCACATTTCAGAGCACACTTTCCTCTAAATGAGTGGTCCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496686.1
CDS TCA 72 bp GGTAGGTGGACAACAGTCCTGCAGCTCTGGCCTGCTTaGAGCACTGAAAATCAGCTCGAATGTCCCCAGAAA +
Preference number: 6 (lower is better)
Translates to: GRWTTVLQLWPA*STENQLECPQK
Trigger: TTTCTGGGGACATTCGAGCTGATTTTCAGTGCTTCAAGCAGGCCAGAGCTGCAGGACTGTTGTCCACCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp GCCGTTGGTCTGGAGAGTTTGGGTTCATTCAATAGCTaGGTGCTTCCAGAGCCTTCGGTATCCTCGAATCCA +
Preference number: 6 (lower is better)
Translates to: AVGLESLGSFNS*VLPEPSVSSNP
Trigger: TGGATTCGAGGATACCGAAGGCTCTGGAAGCACCCAGCTATTGAATGAACCCAAACTCTCCAGACCAACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CAA 90 bp CCTTTCTCTCCTTTGAGACCAATTGCAGCCGTTGGTCTGGAGAGTTaGGGTTCATTCAATAGCTGGGTGCTTCCAGAGCCTTCGGTATCC +
Preference number: 6 (lower is better)
Translates to: PFSPLRPIAAVGLES*GSFNSWVLPEPSVS
Trigger: GGATACCGAAGGCTCTGGAAGCACCCAGCTATTGAATGAACCCAAACTCTCCAGACCAACGGCTGCAATTGGTCTCAAAGGAGAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS TCA 72 bp CAACTTTTGCTTCTTTGGGCGAGGCTTGAGTGTAGGTaGCGGCTTCTAAGATCTCAGCTACTCCGTCTGCCT +
Preference number: 6 (lower is better)
Translates to: QLLLLWARLECR*RLLRSQLLRLP
Trigger: AGGCAGACGGAGTAGCTGAGATCTTAGAAGCCGTCACCTACACTCAAGCCTCGCCCAAAGAAGCAAAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS TCA 72 bp GACAACAGTCCTGCAGCTCTGGCCTGCTTGAAGCACTaGAAATCAGCTCGAATGTCCCCAGAAAATGGCATG +
Preference number: 6 (lower is better)
Translates to: DNSPAALACLKH*KSARMSPENGM
Trigger: CATGCCATTTTCTGGGGACATTCGAGCTGATTTTCAGTGCTTCAAGCAGGCCAGAGCTGCAGGACTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 72 bp GGATGGAGTTGGAGGTGTGTTTATGGGTTCAACTTTTaGTTCTTTGGGCGAGGCTTGAGTGTAGGTGACGGC +
Preference number: 6 (lower is better)
Translates to: GWSWRCVYGFNF*FFGRGLSVGDG
Trigger: GCCGTCACCTACACTCAAGCCTCGCCCAAAGAAGCAAAAGTTGAACCCATAAACACACCTCCAACTCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CAA 72 bp CCTTTGAGACCAATTGCAGCCGTTGGTCTGGAGAGTTaGGGTTCATTCAATAGCTGGGTGCTTCCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: PLRPIAAVGLES*GSFNSWVLPEP
Trigger: AGGCTCTGGAAGCACCCAGCTATTGAATGAACCCAAACTCTCCAGACCAACGGCTGCAATTGGTCTCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS GCA 72 bp TTGGTCTGGAGAGTTTGGGTTCATTCAATAGCTGGGTaGTTCCAGAGCCTTCGGTATCCTCGAATCCAAGTC +
Preference number: 6 (lower is better)
Translates to: LVWRVWVHSIAG*FQSLRYPRIQV
Trigger: GACTTGGATTCGAGGATACCGAAGGCTCTGGAAGCACCCAGCTATTGAATGAACCCAAACTCTCCAGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp CCCAGGATGAGCAGTATCAACTGGCATTTTGCAGTGTaGTCGGACGGGTATTGGGAAAATGGCTCCTTTGAT +
Preference number: 6 (lower is better)
Translates to: PRMSSINWHFAV*SDGYWENGSFD
Trigger: ATCAAAGGAGCCATTTTCCCAATACCCGTCCGACCACACTGCAAAATGCCAGTTGATACTGCTCATCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS TCA 72 bp AGCCAAATGCAGAGCAGGCTTCTCATAATTGGCACTTaGAATAGGGTTTGGTGGAGGCAGAAGCTGATGTGG +
Preference number: 6 (lower is better)
Translates to: SQMQSRLLIIGT*NRVWWRQKLMW
Trigger: CCACATCAGCTTCTGCCTCCACCAAACCCTATTTCAAGTGCCAATTATGAGAAGCCTGCTCTGCATTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS TCA 72 bp CATTTATTGCATGGCGAGTCTGTTCATCCACCTCCCTaGTCTACCTGGAGTGGGACTTTAACTCACAGTGAA +
Preference number: 6 (lower is better)
Translates to: HLLHGESVHPPP*STWSGTLTHSE
Trigger: TTCACTGTGAGTTAAAGTCCCACTCCAGGTAGATCAGGGAGGTGGATGAACAGACTCGCCATGCAATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471477.1
CDS CCA 72 bp AGGGGTTTGGCCTTTTCTTCTGCTAACCAAGAATCATaGTCAGAGTCATGGTCACAATCGTGGTCATGGTTG +
Preference number: 6 (lower is better)
Translates to: RGLAFSSANQES*SESWSQSWSWL
Trigger: CAACCATGACCACGATTGTGACCATGACTCTGACCATGATTCTTGGTTAGCAGAAGAAAAGGCCAAACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496686.1
CDS CCA 72 bp TTCACCAGAAAGTTCCATGTCTTCAAAGGGGGAGGATaGAGTTGGAGGTGTGTTTATGGGTTCAACTTTTGC +
Preference number: 6 (lower is better)
Translates to: FTRKFHVFKGGG*SWRCVYGFNFC
Trigger: GCAAAAGTTGAACCCATAAACACACCTCCAACTCCATCCTCCCCCTTTGAAGACATGGAACTTTCTGGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp TTTCTCTCCTTTAACACCGTGAAAAGTGATGAGCTCTaGACTCCCAGGATGAGCAGTATCAACTGGCATTTT +
Preference number: 6 (lower is better)
Translates to: FLSFNTVKSDEL*TPRMSSINWHF
Trigger: AAAATGCCAGTTGATACTGCTCATCCTGGGAGTCCAGAGCTCATCACTTTTCACGGTGTTAAAGGAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CAA 72 bp CAGAAAGTTCCATGTCTTCAAAGGGGGAGGATGGAGTaGGAGGTGTGTTTATGGGTTCAACTTTTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: QKVPCLQRGRME*EVCLWVQLLLL
Trigger: AAGAAGCAAAAGTTGAACCCATAAACACACCTCCAACTCCATCCTCCCCCTTTGAAGACATGGAACTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1
CDS CCA 72 bp TTTTCTTCTGCTAACCAAGAATCATGGTCAGAGTCATaGTCACAATCGTGGTCATGGTTGCCATTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: FSSANQESWSES*SQSWSWLPFSL
Trigger: AAGAGAGAATGGCAACCATGACCACGATTGTGACCATGACTCTGACCATGATTCTTGGTTAGCAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496686.1
CDS CCA 72 bp ACCAGCTCAGGAATGTCCGAGAAATTCATGAATCCATaGGTGATATTGATCAAGGAATTAGACAAGACCTTG +
Preference number: 6 (lower is better)
Translates to: TSSGMSEKFMNP*VILIKELDKTL
Trigger: CAAGGTCTTGTCTAATTCCTTGATCAATATCACCCATGGATTCATGAATTTCTCGGACATTCCTGAGCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375001.8
ENST00000610452.1